Best Alignments for T0389

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1rhsA	9.2995e-19	1rhsA/T0389-1rhsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
2oucA	2.7635e-18	2oucA/T0389-2oucA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1c25	1.0864e-17	1c25/T0389-1c25-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uarA	1.8107e-17	1uarA/T0389-1uarA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1gmxA	2.7565e-17	1gmxA/T0389-1gmxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.3
1qb0A	3.4790e-17	1qb0A/T0389-1qb0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
2hhgA	3.7766e-17	2hhgA/T0389-2hhgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1okgA	7.6949e-17	1okgA/T0389-1okgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 d.26.1.3
2j6pA	9.0483e-17	2j6pA/T0389-2j6pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yt8A	1.3056e-16	1yt8A/T0389-1yt8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
2a2kA	1.6567e-16	2a2kA/T0389-2a2kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t3kA	2.1114e-16	1t3kA/T0389-1t3kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1whbA	2.2446e-16	1whbA/T0389-1whbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
1e0cA	2.8667e-16	1e0cA/T0389-1e0cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1ymkA	1.2398e-15	1ymkA/T0389-1ymkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
2gwfA	1.3557e-15	2gwfA/T0389-2gwfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
2fsxA	1.6620e-15	2fsxA/T0389-2fsxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhs	2.1841e-15	1rhs/T0389-1rhs-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2eg4A	3.1184e-11	2eg4A/T0389-2eg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wv9A	3.8446e-10	1wv9A/T0389-1wv9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001