# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1g9oA	91	1.42e-10	b.36.1.1	60400
2he2A	102	1.67e-10		
2ozfA	92	2.38e-10		
2he4A	90	2.44e-10		
2i1nA	102	3.46e-10		
2v90A	96	3.69e-10		
2fe5A	94	4.32e-10	b.36.1.1	133323
2opgA	98	5.09e-10		
2qg1A	92	5.43e-10		
2awxA	105	6.05e-10		
1n7eA	97	6.21e-10	b.36.1.1	91691
2fneA	117	6.25e-10	b.36.1.1	133813
1tp5A	119	6.48e-10	b.36.1.1	119305
2iwnA	97	7.10e-10		
2jilA	97	7.31e-10		
1wf7A	103	7.39e-10	b.36.1.1	114577
2ocsA	88	9.36e-10		
2q3gA	89	1.14e-09		
2pktA	91	1.24e-09		
2jikA	101	1.32e-09		
2f5yA	91	1.35e-09	b.36.1.1	133015
2pa1A	87	1.39e-09		
2uzcA	88	1.48e-09		
1qavA	90	2.07e-09	b.36.1.1	24777
2fcfA	103	2.50e-09	b.36.1.1	133267
2iwoA	120	3.26e-09		
2q9vA	90	3.64e-09		
1q3oA	109	3.65e-09	b.36.1.1	95700
1x45A	98	4.08e-09	b.36.1.1	121679
1qauA	112	4.70e-09	b.36.1.1	24779
2vphA	100	4.81e-09		
1nf3C	128	4.92e-09	b.36.1.1	85596
1kwaA	88	6.63e-09	b.36.1.1	24772
2egoA	96	7.05e-09		
1ihjA	98	7.14e-09	b.36.1.1	62382
2qkvA	96	7.19e-09		
2h2bA	107	7.72e-09		
2reyA	100	1.03e-08		
2h3lA	103	1.11e-08	b.36.1.1	136046
2i04A	85	1.24e-08		
2f0aA	98	1.41e-08	b.36.1.1	132661
1r6jA	82	1.55e-08	b.36.1.1	97151
2gzvA	114	1.65e-08		
1mfgA	95	1.76e-08	b.36.1.1	79043
2eaqA	90	3.36e-08		
1fc6A	388	3.39e-08	b.36.1.3,c.14.1.2	64738,64739
3bpuA	88	4.77e-08		
2rczA	81	5.60e-06		
2p3wA	112	0.000119		
1lcyA	325	0.000368	b.36.1.4,b.47.1.1	73834,73835
1y8tA	324	0.000419	b.36.1.4,b.47.1.1	122763,122764
1te0A	318	0.000890	b.36.1.4,b.47.1.1	112400,112401
1j7xA	302	0.009334	c.14.1.2	66425
1k32A	1045	0.02639	b.36.1.3,b.68.7.1,b.69.9.1,c.14.1.2	68068,68069,68070,68071
2i6vA	87	13.23		
1l3kA	196	31.30	d.58.7.1,d.58.7.1	73539,73540
2zihA	347	34.89		
1w30A	201	45.19	c.61.1.1	114118
1jdlA	121	60.74	a.3.1.1	66557
1ro0A	216	62.24	d.264.1.2	97664
2qsfX	171	65.84		
1vddA	228	65.93	e.49.1.1	108519
1n91A	108	66.87	d.206.1.1	80326
1fxlA	167	68.29	d.58.7.1,d.58.7.1	39183,39184
1d0qA	103	70.61	g.41.3.2	45208
1wotA	98	76.89	d.218.1.5	109470
1ro2A	216	76.97	d.264.1.2	97665
2cw5A	255	78.07		
2j3tD	219	79.49		
1c9oA	66	79.64	b.40.4.5	25325
2igbA	179	81.03		
1vs0A	310	86.20		
3bpkA	206	89.63