Best Alignments for T0387

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1g9oA/T0387-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g9oA/T0387-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9859e-194.79e-59 1pdr b.36.1.1
2ozfA/T0387-2ozfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ozfA/T0387-2ozfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2364e-181.56e-57
2ocsA/T0387-2ocsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ocsA/T0387-2ocsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0288e-174.09e-55
2he4A/T0387-2he4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2he4A/T0387-2he4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6561e-176.68e-54
2he2A/T0387-2he2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2he2A/T0387-2he2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1337e-172.51e-49
2i1nA/T0387-2i1nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2i1nA/T0387-2i1nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0423e-161.35e-52
2jikA/T0387-2jikA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2jikA/T0387-2jikA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2262e-163.99e-52
2opgA/T0387-2opgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2opgA/T0387-2opgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3177e-163.20e-52
2pktA/T0387-2pktA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pktA/T0387-2pktA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0661e-161.57e-49
2qg1A/T0387-2qg1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qg1A/T0387-2qg1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8352e-168.93e-52

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001