Best Alignments for T0387

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1g9oA/T0387-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g9oA/T0387-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4968e-171.19e-66 1pdr b.36.1.1
2ozfA/T0387-2ozfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ozfA/T0387-2ozfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7611e-178.87e-66
2he2A/T0387-2he2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2he2A/T0387-2he2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3048e-162.26e-58
2he4A/T0387-2he4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2he4A/T0387-2he4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0376e-162.40e-59
2i1nA/T0387-2i1nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2i1nA/T0387-2i1nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9406e-168.47e-57
2ocsA/T0387-2ocsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ocsA/T0387-2ocsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6791e-163.23e-59
2jikA/T0387-2jikA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2jikA/T0387-2jikA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1308e-154.43e-58
2awxA/T0387-2awxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2awxA/T0387-2awxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5368e-151.42e-54
2qg1A/T0387-2qg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qg1A/T0387-2qg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9592e-155.86e-61
2opgA/T0387-2opgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2opgA/T0387-2opgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1158e-155.33e-57

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001