# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/
# command:# reading dunbrack-2191.atoms
#
#computed average backbone with maximum peptide_sq_deviance = 0.002
# computed average trans backbone unit from 53157 examples
# computed average trans backbone unit before proline from 2010 examples
# computed average cis backbone unit from 97 examples
# trans (non-proline) backbone unit:
# CA= -2.2087 1.0126 -0.0030
# O= -0.1499 2.2440 0.0016
# C= -0.6889 1.1368 -0.0000
# N+1= 0.0000 0.0000 0.0000
# CA+1= 1.4581 -0.0000 0.0000
# cis backbone unit:
# CA= -0.1436 2.4534 -0.0002
# O= -2.0284 0.9742 0.0015
# C= -0.8018 1.0771 -0.0000
# N+1= 0.0000 0.0000 0.0000
# CA+1= 1.4668 0.0000 0.0000
# trans backbone unit before proline:
# CA= -2.2100 1.0631 -0.0014
# O= -0.1236 2.2458 0.0075
# C= -0.6872 1.1517 -0.0000
# N+1= 0.0000 0.0000 0.0000
# CA+1= 1.4660 0.0000 0.0000
# After reading dunbrack-2191.atoms have 2191 chains in training database
# Count of chains,residues,atoms: 2191,500310,3902258
# 493341 residues have no bad marker
# 3226 residues lack atoms needed to compute omega
# 1453 residues have cis peptide
# number of each bad type:
# NON_STANDARD_RESIDUE 4
# HAS_OXT 1167
# TOO_MANY_ATOMS 1
# TOO_FEW_ATOMS 3052
# HAS_UNKNOWN_ATOMS 9
# HAS_DUPLICATE_ATOMS 0
# CHAIN_BREAK_BEFORE 979
# NON_PLANAR_PEPTIDE 888
# BAD_PEPTIDE 2680
# Note: may sum to more than number of residues,
# because one residue may have multiple problems
# command:# Reading rotamer library from dunbrack-2191.rot
# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/
# command:# ReadAtomType exp-pdb.types
Read AtomType exp-pdb with 49 types.
# command:# ReadClashTable exp-pdb-2191-2symm.clash
# Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2
# command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0356/
# command:# Making conformation for sequence T0356 numbered 1 through 505
Created new target T0356 from T0356.a2m
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0356/
# command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0356//projects/compbio/experiments/protein-predict/casp7/T0356/align.constraints_v3.costfcn or /projects/compbio/experiments/protein-predict/casp7/T0356//projects/compbio/experiments/protein-predict/casp7/T0356/align.constraints_v3.costfcn.gz for input
Trying /projects/compbio/experiments/protein-predict/casp7/T0356/align.constraints_v3.costfcn
# reading script from file /projects/compbio/experiments/protein-predict/casp7/T0356/align.constraints_v3.costfcn
# future Constraint commands -> align
# future HelixConstraint commands -> align
# future StrandConstraint commands -> align
# future SheetConstraint commands -> align
# future Hbond commands -> align
# future SSbond commands -> align
# Constraint # added constraint: constraint((T0356)V341.CB, (T0356)F354.CB) [> 3.4511 = 5.7518 < 7.4773] w=1.0000 to align
# Constraint # added constraint: constraint((T0356)N337.CB, (T0356)Y355.CB) [> 4.0167 = 6.6946 < 8.7029] w=0.9382 to align
# Constraint # added constraint: constraint((T0356)N337.CB, (T0356)L356.CB) [> 3.0303 = 5.0506 < 6.5657] w=0.9264 to align
# Constraint # added constraint: constraint((T0356)V341.CB, (T0356)D353.CB) [> 3.9067 = 6.5112 < 8.4645] w=0.9219 to align
# Constraint # added constraint: constraint((T0356)L344.CB, (T0356)V381.CB) [> 3.8768 = 6.4613 < 8.3997] w=0.9103 to align
# Constraint # added constraint: constraint((T0356)F340.CB, (T0356)V385.CB) [> 3.9001 = 6.5002 < 8.4502] w=0.8942 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)T253.CB) [> 3.6031 = 6.0051 < 7.8066] w=0.8663 to align
# Constraint # added constraint: constraint((T0356)F340.CB, (T0356)F354.CB) [> 3.3025 = 5.5042 < 7.1554] w=0.8505 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)L429.CB) [> 3.6688 = 6.1147 < 7.9492] w=0.8453 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)V428.CB) [> 3.7409 = 6.2348 < 8.1053] w=0.8453 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)V428.CB) [> 3.4472 = 5.7453 < 7.4689] w=0.8453 to align
# Constraint # added constraint: constraint((T0356)Q347.CB, (T0356)V381.CB) [> 3.2446 = 5.4076 < 7.0299] w=0.8058 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)Y317.CB) [> 3.6335 = 6.0559 < 7.8726] w=0.8047 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)A366.CB) [> 3.9669 = 6.6115 < 8.5949] w=0.7781 to align
# Constraint # added constraint: constraint((T0356)Q345.CB, (T0356)F354.CB) [> 4.2607 = 7.1013 < 9.2316] w=0.7684 to align
# Constraint # added constraint: constraint((T0356)L344.CB, (T0356)F354.CB) [> 2.9380 = 4.8967 < 6.3657] w=0.7602 to align
# Constraint # added constraint: constraint((T0356)I316.CB, (T0356)V352.CB) [> 4.2904 = 7.1506 < 9.2958] w=0.7570 to align
# Constraint # added constraint: constraint((T0356)Q347.CB, (T0356)R380.CB) [> 4.2747 = 7.1245 < 9.2618] w=0.7512 to align
# Constraint # added constraint: constraint((T0356)V341.CB, (T0356)I351.CB) [> 3.8461 = 6.4101 < 8.3331] w=0.7382 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)T253.CB) [> 3.6830 = 6.1383 < 7.9798] w=0.7277 to align
# Constraint # added constraint: constraint((T0356)F340.CB, (T0356)A366.CB) [> 3.7695 = 6.2826 < 8.1673] w=0.7246 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)V367.CB) [> 3.7754 = 6.2923 < 8.1800] w=0.7229 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)L365.CB) [> 4.1056 = 6.8427 < 8.8955] w=0.7222 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)D426.CB) [> 3.7004 = 6.1672 < 8.0174] w=0.6863 to align
# Constraint # added constraint: constraint((T0356)Q347.CB, (T0356)G384.CA) [> 3.7214 = 6.2023 < 8.0630] w=0.6825 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)R364.CB) [> 3.3701 = 5.6168 < 7.3018] w=0.6714 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)A366.CB) [> 3.3438 = 5.5731 < 7.2450] w=0.6714 to align
# Constraint # added constraint: constraint((T0356)L344.CB, (T0356)V385.CB) [> 2.8704 = 4.7840 < 6.2192] w=0.6579 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)L429.CB) [> 4.3363 = 7.2271 < 9.3952] w=0.6561 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)V256.CB) [> 3.5346 = 5.8910 < 7.6583] w=0.6546 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)E254.CB) [> 4.2980 = 7.1633 < 9.3123] w=0.6546 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)E254.CB) [> 3.7755 = 6.2925 < 8.1802] w=0.6546 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)T253.CB) [> 4.2052 = 7.0086 < 9.1112] w=0.6546 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)H318.CB) [> 4.4699 = 7.4497 < 9.6847] w=0.6516 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)T320.CB) [> 4.1846 = 6.9743 < 9.0666] w=0.6516 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)S319.CB) [> 3.7156 = 6.1926 < 8.0504] w=0.6516 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)A378.CB) [> 4.0309 = 6.7181 < 8.7336] w=0.6472 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)V385.CB) [> 3.8544 = 6.4241 < 8.3513] w=0.6471 to align
# Constraint # added constraint: constraint((T0356)A243.CB, (T0356)T253.CB) [> 3.6094 = 6.0157 < 7.8205] w=0.6469 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)T253.CB) [> 3.3213 = 5.5355 < 7.1962] w=0.6469 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)V352.CB) [> 4.1010 = 6.8349 < 8.8854] w=0.6465 to align
# Constraint # added constraint: constraint((T0356)E350.CB, (T0356)I370.CB) [> 2.9136 = 4.8561 < 6.3129] w=0.6337 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)V413.CB) [> 3.8250 = 6.3750 < 8.2874] w=0.6316 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)T427.CB) [> 3.2920 = 5.4867 < 7.1327] w=0.6157 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)R425.CB) [> 3.9322 = 6.5537 < 8.5198] w=0.6157 to align
# Constraint # added constraint: constraint((T0356)K396.CB, (T0356)R425.CB) [> 3.6858 = 6.1429 < 7.9858] w=0.6157 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)A366.CB) [> 4.1000 = 6.8334 < 8.8834] w=0.6143 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)F354.CB) [> 3.4053 = 5.6754 < 7.3780] w=0.6141 to align
# Constraint # added constraint: constraint((T0356)L336.CB, (T0356)L356.CB) [> 3.9370 = 6.5617 < 8.5302] w=0.6101 to align
# Constraint # added constraint: constraint((T0356)G333.CA, (T0356)L356.CB) [> 3.4716 = 5.7861 < 7.5219] w=0.6101 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)V430.CB) [> 3.4808 = 5.8014 < 7.5418] w=0.6084 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)S319.CB) [> 3.6517 = 6.0862 < 7.9121] w=0.6069 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)V256.CB) [> 4.1335 = 6.8892 < 8.9559] w=0.6046 to align
# Constraint # added constraint: constraint((T0356)D402.CB, (T0356)E431.CB) [> 3.5711 = 5.9518 < 7.7373] w=0.6031 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)V367.CB) [> 3.9446 = 6.5744 < 8.5467] w=0.6012 to align
# Constraint # added constraint: constraint((T0356)I343.CB, (T0356)V385.CB) [> 2.6980 = 4.4966 < 5.8456] w=0.5993 to align
# Constraint # added constraint: constraint((T0356)I343.CB, (T0356)G384.CA) [> 4.1080 = 6.8467 < 8.9007] w=0.5993 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)V428.CB) [> 4.0416 = 6.7359 < 8.7567] w=0.5978 to align
# Constraint # added constraint: constraint((T0356)F348.CB, (T0356)V381.CB) [> 2.5952 = 4.3253 < 5.6229] w=0.5909 to align
# Constraint # added constraint: constraint((T0356)F348.CB, (T0356)A378.CB) [> 4.1769 = 6.9615 < 9.0499] w=0.5909 to align
# Constraint # added constraint: constraint((T0356)F348.CB, (T0356)H377.CB) [> 3.6155 = 6.0258 < 7.8335] w=0.5909 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)L365.CB) [> 3.8281 = 6.3802 < 8.2942] w=0.5909 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)A378.CB) [> 3.5936 = 5.9893 < 7.7861] w=0.5909 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)V367.CB) [> 4.2719 = 7.1198 < 9.2557] w=0.5909 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)I351.CB) [> 4.3306 = 7.2176 < 9.3829] w=0.5881 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)V430.CB) [> 3.9697 = 6.6162 < 8.6010] w=0.5851 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)L365.CB) [> 3.3847 = 5.6411 < 7.3334] w=0.5829 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)R364.CB) [> 4.3903 = 7.3171 < 9.5122] w=0.5829 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)L365.CB) [> 4.1734 = 6.9557 < 9.0425] w=0.5829 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)V367.CB) [> 3.4310 = 5.7184 < 7.4339] w=0.5829 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)V413.CB) [> 3.8483 = 6.4139 < 8.3380] w=0.5783 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)C258.CB) [> 3.5391 = 5.8984 < 7.6680] w=0.5780 to align
# Constraint # added constraint: constraint((T0356)D404.CB, (T0356)V430.CB) [> 4.1603 = 6.9338 < 9.0140] w=0.5740 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)V381.CB) [> 3.9772 = 6.6286 < 8.6172] w=0.5639 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)A378.CB) [> 3.6519 = 6.0865 < 7.9124] w=0.5639 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)V367.CB) [> 4.3153 = 7.1922 < 9.3499] w=0.5634 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)V367.CB) [> 3.1689 = 5.2815 < 6.8660] w=0.5634 to align
# Constraint # added constraint: constraint((T0356)F340.CB, (T0356)L356.CB) [> 3.6342 = 6.0570 < 7.8741] w=0.5633 to align
# Constraint # added constraint: constraint((T0356)P349.CB, (T0356)K371.CB) [> 4.3324 = 7.2207 < 9.3869] w=0.5578 to align
# Constraint # added constraint: constraint((T0356)W386.CB, (T0356)W485.CB) [> 3.6532 = 6.0887 < 7.9152] w=0.5549 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)F244.CB) [> 3.7272 = 6.2121 < 8.0757] w=0.5539 to align
# Constraint # added constraint: constraint((T0356)I309.CB, (T0356)H318.CB) [> 4.0830 = 6.8051 < 8.8466] w=0.5531 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)T320.CB) [> 2.7402 = 4.5670 < 5.9372] w=0.5523 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)S319.CB) [> 4.1601 = 6.9335 < 9.0135] w=0.5523 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)Y321.CB) [> 3.6562 = 6.0937 < 7.9218] w=0.5523 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)T322.CB) [> 3.6527 = 6.0878 < 7.9141] w=0.5523 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)S319.CB) [> 3.7113 = 6.1856 < 8.0412] w=0.5438 to align
# Constraint # added constraint: constraint((T0356)D404.CB, (T0356)E431.CB) [> 3.5799 = 5.9665 < 7.7564] w=0.5424 to align
# Constraint # added constraint: constraint((T0356)I316.CB, (T0356)I351.CB) [> 2.9664 = 4.9441 < 6.4273] w=0.5350 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)T427.CB) [> 4.1779 = 6.9632 < 9.0522] w=0.5325 to align
# Constraint # added constraint: constraint((T0356)K396.CB, (T0356)D426.CB) [> 3.5176 = 5.8627 < 7.6216] w=0.5325 to align
# Constraint # added constraint: constraint((T0356)I343.CB, (T0356)F388.CB) [> 2.8224 = 4.7040 < 6.1151] w=0.5295 to align
# Constraint # added constraint: constraint((T0356)L336.CB, (T0356)L389.CB) [> 3.7892 = 6.3154 < 8.2100] w=0.5295 to align
# Constraint # added constraint: constraint((T0356)F397.CB, (T0356)D426.CB) [> 2.5850 = 4.3083 < 5.6008] w=0.5272 to align
# Constraint # added constraint: constraint((T0356)F397.CB, (T0356)R425.CB) [> 3.8530 = 6.4217 < 8.3482] w=0.5272 to align
# Constraint # added constraint: constraint((T0356)T395.CB, (T0356)R425.CB) [> 4.2897 = 7.1494 < 9.2943] w=0.5272 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)F244.CB) [> 4.0521 = 6.7535 < 8.7795] w=0.5183 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)A375.CB) [> 3.2497 = 5.4162 < 7.0411] w=0.5161 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)A378.CB) [> 3.7311 = 6.2185 < 8.0840] w=0.5161 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)V256.CB) [> 2.8254 = 4.7090 < 6.1217] w=0.5161 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)T427.CB) [> 3.7707 = 6.2846 < 8.1699] w=0.5150 to align
# Constraint # added constraint: constraint((T0356)E350.CB, (T0356)K371.CB) [> 2.5309 = 4.2181 < 5.4836] w=0.5149 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)V368.CB) [> 3.6403 = 6.0672 < 7.8873] w=0.5127 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)T369.CB) [> 2.9388 = 4.8980 < 6.3674] w=0.5127 to align
# Constraint # added constraint: constraint((T0356)F348.CB, (T0356)I370.CB) [> 3.8831 = 6.4719 < 8.4135] w=0.5127 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)Y242.CB) [> 4.3713 = 7.2855 < 9.4712] w=0.5099 to align
# Constraint # added constraint: constraint((T0356)C207.CB, (T0356)L248.CB) [> 4.3743 = 7.2905 < 9.4776] w=0.5098 to align
# Constraint # added constraint: constraint((T0356)Y179.CB, (T0356)M191.CB) [> 3.3810 = 5.6350 < 7.3254] w=0.5021 to align
# Constraint # added constraint: constraint((T0356)L344.CB, (T0356)M382.CB) [> 4.3270 = 7.2117 < 9.3752] w=0.5009 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)L429.CB) [> 3.6124 = 6.0208 < 7.8270] w=0.4971 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)I417.CB) [> 3.2027 = 5.3378 < 6.9392] w=0.4953 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)V255.CB) [> 4.4967 = 7.4944 < 9.7427] w=0.4951 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)D353.CB) [> 4.1687 = 6.9478 < 9.0321] w=0.4926 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)H318.CB) [> 2.5085 = 4.1809 < 5.4352] w=0.4892 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)T320.CB) [> 3.0078 = 5.0129 < 6.5168] w=0.4892 to align
# Constraint # added constraint: constraint((T0356)H308.CB, (T0356)Y317.CB) [> 4.0929 = 6.8215 < 8.8679] w=0.4892 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)F340.CB) [> 4.4818 = 7.4696 < 9.7105] w=0.4860 to align
# Constraint # added constraint: constraint((T0356)G230.CA, (T0356)A245.CB) [> 3.2961 = 5.4936 < 7.1416] w=0.4851 to align
# Constraint # added constraint: constraint((T0356)G230.CA, (T0356)F244.CB) [> 3.3338 = 5.5564 < 7.2233] w=0.4851 to align
# Constraint # added constraint: constraint((T0356)W193.CB, (T0356)Y203.CB) [> 4.4907 = 7.4845 < 9.7299] w=0.4811 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)V255.CB) [> 3.5509 = 5.9181 < 7.6936] w=0.4750 to align
# Constraint # added constraint: constraint((T0356)G230.CA, (T0356)A243.CB) [> 3.4914 = 5.8190 < 7.5646] w=0.4744 to align
# Constraint # added constraint: constraint((T0356)G230.CA, (T0356)Y242.CB) [> 2.8865 = 4.8109 < 6.2541] w=0.4744 to align
# Constraint # added constraint: constraint((T0356)L229.CB, (T0356)Y242.CB) [> 4.1388 = 6.8980 < 8.9674] w=0.4744 to align
# Constraint # added constraint: constraint((T0356)P325.CB, (T0356)L356.CB) [> 3.5157 = 5.8595 < 7.6174] w=0.4711 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)I370.CB) [> 3.5707 = 5.9512 < 7.7365] w=0.4698 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)I370.CB) [> 3.7966 = 6.3277 < 8.2260] w=0.4698 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)Y317.CB) [> 4.4336 = 7.3893 < 9.6061] w=0.4627 to align
# Constraint # added constraint: constraint((T0356)D402.CB, (T0356)V413.CB) [> 3.4445 = 5.7409 < 7.4631] w=0.4606 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)L356.CB) [> 3.9555 = 6.5926 < 8.5703] w=0.4546 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)L356.CB) [> 3.5721 = 5.9535 < 7.7396] w=0.4546 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)Y355.CB) [> 3.0738 = 5.1231 < 6.6600] w=0.4546 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)F354.CB) [> 4.3748 = 7.2914 < 9.4788] w=0.4546 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)Y355.CB) [> 4.0215 = 6.7025 < 8.7132] w=0.4546 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)F354.CB) [> 4.1241 = 6.8735 < 8.9356] w=0.4546 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)D353.CB) [> 3.2637 = 5.4394 < 7.0713] w=0.4546 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)L247.CB) [> 3.5904 = 5.9840 < 7.7791] w=0.4536 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)V385.CB) [> 3.6751 = 6.1252 < 7.9628] w=0.4483 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)V352.CB) [> 3.2331 = 5.3885 < 7.0051] w=0.4470 to align
# Constraint # added constraint: constraint((T0356)V339.CB, (T0356)F388.CB) [> 4.2579 = 7.0965 < 9.2254] w=0.4463 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)K257.CB) [> 3.7348 = 6.2246 < 8.0920] w=0.4451 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)C258.CB) [> 4.3398 = 7.2330 < 9.4028] w=0.4451 to align
# Constraint # added constraint: constraint((T0356)F397.CB, (T0356)T427.CB) [> 4.5360 = 7.5600 < 9.8280] w=0.4440 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)T427.CB) [> 3.4183 = 5.6972 < 7.4063] w=0.4387 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)I417.CB) [> 3.3535 = 5.5891 < 7.2658] w=0.4385 to align
# Constraint # added constraint: constraint((T0356)L344.CB, (T0356)V368.CB) [> 3.5430 = 5.9051 < 7.6766] w=0.4367 to align
# Constraint # added constraint: constraint((T0356)N432.CB, (T0356)V444.CB) [> 3.2215 = 5.3692 < 6.9799] w=0.4354 to align
# Constraint # added constraint: constraint((T0356)D403.CB, (T0356)E431.CB) [> 3.7637 = 6.2728 < 8.1546] w=0.4312 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)L344.CB) [> 4.4010 = 7.3349 < 9.5354] w=0.4297 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)D353.CB) [> 3.5289 = 5.8816 < 7.6460] w=0.4287 to align
# Constraint # added constraint: constraint((T0356)L389.CB, (T0356)I481.CB) [> 2.4444 = 4.0739 < 5.2961] w=0.4270 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)C361.CB) [> 3.5477 = 5.9129 < 7.6867] w=0.4270 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)V430.CB) [> 3.8527 = 6.4212 < 8.3476] w=0.4261 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)C258.CB) [> 3.7952 = 6.3253 < 8.2229] w=0.4249 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)C258.CB) [> 3.3956 = 5.6593 < 7.3570] w=0.4249 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)K257.CB) [> 3.5349 = 5.8915 < 7.6590] w=0.4249 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)Y242.CB) [> 3.5083 = 5.8471 < 7.6013] w=0.4249 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)V398.CB) [> 4.3463 = 7.2438 < 9.4170] w=0.4228 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)T395.CB) [> 4.0665 = 6.7775 < 8.8107] w=0.4228 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)G323.CA) [> 3.5108 = 5.8513 < 7.6067] w=0.4193 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)L365.CB) [> 4.2392 = 7.0653 < 9.1849] w=0.4190 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)A366.CB) [> 2.9757 = 4.9595 < 6.4474] w=0.4190 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)Y363.CB) [> 3.4159 = 5.6932 < 7.4012] w=0.4190 to align
# Constraint # added constraint: constraint((T0356)Y179.CB, (T0356)R192.CB) [> 3.6194 = 6.0324 < 7.8421] w=0.4189 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)T320.CB) [> 4.3582 = 7.2637 < 9.4428] w=0.4174 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)Y374.CB) [> 4.1411 = 6.9019 < 8.9724] w=0.4157 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)R364.CB) [> 4.4258 = 7.3763 < 9.5892] w=0.4152 to align
# Constraint # added constraint: constraint((T0356)T427.CB, (T0356)Y437.CB) [> 4.0613 = 6.7689 < 8.7995] w=0.4127 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)Y317.CB) [> 3.1801 = 5.3001 < 6.8901] w=0.4126 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)I316.CB) [> 4.0967 = 6.8279 < 8.8763] w=0.4126 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)A315.CB) [> 4.3232 = 7.2052 < 9.3668] w=0.4126 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)I351.CB) [> 3.2547 = 5.4245 < 7.0519] w=0.4113 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)I316.CB) [> 3.5965 = 5.9942 < 7.7924] w=0.4095 to align
# Constraint # added constraint: constraint((T0356)V413.CB, (T0356)V430.CB) [> 3.9281 = 6.5468 < 8.5109] w=0.4066 to align
# Constraint # added constraint: constraint((T0356)A416.CB, (T0356)V428.CB) [> 4.5348 = 7.5581 < 9.8255] w=0.4066 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)V428.CB) [> 3.0714 = 5.1189 < 6.6546] w=0.4066 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)V367.CB) [> 3.6742 = 6.1238 < 7.9609] w=0.4059 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)A366.CB) [> 4.4193 = 7.3655 < 9.5751] w=0.4059 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)Y363.CB) [> 2.9512 = 4.9187 < 6.3942] w=0.4059 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)R364.CB) [> 4.1173 = 6.8622 < 8.9208] w=0.4023 to align
# Constraint # added constraint: constraint((T0356)A231.CB, (T0356)F244.CB) [> 4.1308 = 6.8846 < 8.9500] w=0.3989 to align
# Constraint # added constraint: constraint((T0356)A231.CB, (T0356)Y242.CB) [> 4.1925 = 6.9875 < 9.0837] w=0.3989 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)A416.CB) [> 3.0736 = 5.1226 < 6.6594] w=0.3977 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)D412.CB) [> 3.1209 = 5.2016 < 6.7620] w=0.3977 to align
# Constraint # added constraint: constraint((T0356)D404.CB, (T0356)T433.CB) [> 4.3208 = 7.2014 < 9.3618] w=0.3970 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)V219.CB) [> 3.1230 = 5.2050 < 6.7665] w=0.3960 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)V219.CB) [> 4.6529 = 7.7549 < 10.0814] w=0.3960 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)Y321.CB) [> 4.0025 = 6.6708 < 8.6720] w=0.3917 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)L365.CB) [> 4.0585 = 6.7642 < 8.7935] w=0.3899 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)T322.CB) [> 4.6698 = 7.7829 < 10.1178] w=0.3866 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)V256.CB) [> 4.3885 = 7.3141 < 9.5083] w=0.3865 to align
# Constraint # added constraint: constraint((T0356)F215.CB, (T0356)K252.CB) [> 4.3748 = 7.2914 < 9.4788] w=0.3865 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)L229.CB) [> 4.0127 = 6.6877 < 8.6941] w=0.3859 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)I351.CB) [> 4.4018 = 7.3362 < 9.5371] w=0.3834 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)V255.CB) [> 3.2463 = 5.4106 < 7.0337] w=0.3818 to align
# Constraint # added constraint: constraint((T0356)P349.CB, (T0356)H377.CB) [> 3.7482 = 6.2470 < 8.1212] w=0.3808 to align
# Constraint # added constraint: constraint((T0356)R180.CB, (T0356)I190.CB) [> 4.0920 = 6.8200 < 8.8660] w=0.3805 to align
# Constraint # added constraint: constraint((T0356)R180.CB, (T0356)L189.CB) [> 3.4523 = 5.7538 < 7.4799] w=0.3805 to align
# Constraint # added constraint: constraint((T0356)G177.CA, (T0356)W193.CB) [> 3.8702 = 6.4503 < 8.3854] w=0.3805 to align
# Constraint # added constraint: constraint((T0356)L176.CB, (T0356)W193.CB) [> 3.9589 = 6.5981 < 8.5776] w=0.3805 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)S449.CB) [> 3.1655 = 5.2758 < 6.8586] w=0.3800 to align
# Constraint # added constraint: constraint((T0356)Y363.CB, (T0356)H377.CB) [> 4.2730 = 7.1217 < 9.2582] w=0.3731 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)L248.CB) [> 3.6155 = 6.0259 < 7.8336] w=0.3714 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)G448.CA) [> 4.2512 = 7.0853 < 9.2108] w=0.3711 to align
# Constraint # added constraint: constraint((T0356)K379.CB, (T0356)A416.CB) [> 4.3752 = 7.2921 < 9.4797] w=0.3711 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)A416.CB) [> 3.1759 = 5.2932 < 6.8811] w=0.3711 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)W415.CB) [> 4.1210 = 6.8683 < 8.9288] w=0.3711 to align
# Constraint # added constraint: constraint((T0356)A375.CB, (T0356)D412.CB) [> 3.7297 = 6.2162 < 8.0811] w=0.3711 to align
# Constraint # added constraint: constraint((T0356)L33.CB, (T0356)E87.CB) [> 4.3516 = 7.2527 < 9.4285] w=0.3711 to align
# Constraint # added constraint: constraint((T0356)A74.CB, (T0356)L85.CB) [> 3.4523 = 5.7539 < 7.4801] w=0.3699 to align
# Constraint # added constraint: constraint((T0356)V73.CB, (T0356)L85.CB) [> 3.5243 = 5.8738 < 7.6359] w=0.3699 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)A245.CB) [> 3.9214 = 6.5357 < 8.4965] w=0.3688 to align
# Constraint # added constraint: constraint((T0356)L176.CB, (T0356)L194.CB) [> 3.8832 = 6.4719 < 8.4135] w=0.3678 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)V352.CB) [> 4.1846 = 6.9743 < 9.0666] w=0.3661 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)D353.CB) [> 4.3708 = 7.2846 < 9.4700] w=0.3661 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)Y355.CB) [> 4.5615 = 7.6025 < 9.8832] w=0.3661 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)P325.CB) [> 4.4556 = 7.4260 < 9.6538] w=0.3661 to align
# Constraint # added constraint: constraint((T0356)Q181.CB, (T0356)I190.CB) [> 3.5320 = 5.8866 < 7.6526] w=0.3655 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)L248.CB) [> 3.8674 = 6.4457 < 8.3794] w=0.3647 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)G323.CA) [> 4.7095 = 7.8492 < 10.2040] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)K379.CB) [> 2.5515 = 4.2526 < 5.5283] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)M382.CB) [> 3.5252 = 5.8753 < 7.6379] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)T322.CB) [> 4.3145 = 7.1908 < 9.3481] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)T320.CB) [> 4.6930 = 7.8217 < 10.1682] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)H308.CB, (T0356)H318.CB) [> 2.4462 = 4.0770 < 5.3001] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)A315.CB, (T0356)K371.CB) [> 4.0574 = 6.7623 < 8.7910] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)A315.CB, (T0356)K372.CB) [> 3.3277 = 5.5462 < 7.2100] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)A315.CB, (T0356)Q373.CB) [> 3.8827 = 6.4712 < 8.4126] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)K372.CB) [> 4.0041 = 6.6735 < 8.6756] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)Y374.CB) [> 3.9904 = 6.6508 < 8.6460] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)V367.CB) [> 4.4264 = 7.3774 < 9.5906] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)M382.CB) [> 3.4452 = 5.7420 < 7.4646] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)C361.CB) [> 3.7020 = 6.1700 < 8.0210] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)E297.CB, (T0356)P326.CB) [> 4.3005 = 7.1675 < 9.3177] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)D299.CB, (T0356)T322.CB) [> 4.1525 = 6.9208 < 8.9971] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)F301.CB, (T0356)T322.CB) [> 3.1583 = 5.2638 < 6.8430] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)F301.CB, (T0356)G323.CA) [> 3.3039 = 5.5066 < 7.1585] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)F301.CB, (T0356)R324.CB) [> 3.3505 = 5.5841 < 7.2593] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)F301.CB, (T0356)P325.CB) [> 2.4156 = 4.0260 < 5.2338] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)F301.CB, (T0356)P326.CB) [> 4.2442 = 7.0736 < 9.1957] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)F301.CB, (T0356)C361.CB) [> 4.3812 = 7.3021 < 9.4927] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)F301.CB, (T0356)E487.CB) [> 4.6762 = 7.7936 < 10.1317] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)P302.CB, (T0356)T322.CB) [> 3.7207 = 6.2011 < 8.0614] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)P302.CB, (T0356)G323.CA) [> 2.6126 = 4.3543 < 5.6606] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)P302.CB, (T0356)R324.CB) [> 4.5111 = 7.5185 < 9.7741] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)P302.CB, (T0356)I484.CB) [> 2.4810 = 4.1351 < 5.3756] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)V339.CB, (T0356)V477.CB) [> 3.7721 = 6.2868 < 8.1729] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)Q347.CB, (T0356)F388.CB) [> 4.7403 = 7.9005 < 10.2707] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)M383.CB, (T0356)W485.CB) [> 4.2329 = 7.0547 < 9.1712] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)W386.CB, (T0356)I481.CB) [> 2.6910 = 4.4850 < 5.8305] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)W386.CB, (T0356)I484.CB) [> 3.5029 = 5.8382 < 7.5897] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)L389.CB, (T0356)V478.CB) [> 3.8228 = 6.3713 < 8.2827] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)Q391.CB, (T0356)V478.CB) [> 4.6591 = 7.7651 < 10.0946] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)H480.CB) [> 4.2819 = 7.1365 < 9.2775] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)R324.CB, (T0356)C361.CB) [> 2.5041 = 4.1734 < 5.4254] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)V331.CB, (T0356)K473.CB) [> 3.0744 = 5.1239 < 6.6611] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)L332.CB, (T0356)V477.CB) [> 3.0111 = 5.0184 < 6.5240] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)L332.CB, (T0356)H480.CB) [> 3.7317 = 6.2195 < 8.0854] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)L336.CB, (T0356)I481.CB) [> 4.5149 = 7.5248 < 9.7823] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)L336.CB, (T0356)H480.CB) [> 3.9417 = 6.5695 < 8.5403] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)A335.CB, (T0356)V477.CB) [> 2.3770 = 3.9617 < 5.1502] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)A335.CB, (T0356)D474.CB) [> 3.2955 = 5.4925 < 7.1402] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)A335.CB, (T0356)K473.CB) [> 3.1784 = 5.2974 < 6.8866] w=0.3631 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)E254.CB) [> 3.0324 = 5.0540 < 6.5702] w=0.3630 to align
# Constraint # added constraint: constraint((T0356)F215.CB, (T0356)T251.CB) [> 2.9214 = 4.8690 < 6.3297] w=0.3630 to align
# Constraint # added constraint: constraint((T0356)Y294.CB, (T0356)T320.CB) [> 4.5325 = 7.5542 < 9.8205] w=0.3604 to align
# Constraint # added constraint: constraint((T0356)T233.CB, (T0356)F244.CB) [> 4.2680 = 7.1133 < 9.2473] w=0.3578 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)S319.CB) [> 4.1751 = 6.9584 < 9.0460] w=0.3563 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)H318.CB) [> 3.7610 = 6.2684 < 8.1489] w=0.3563 to align
# Constraint # added constraint: constraint((T0356)F397.CB, (T0356)V428.CB) [> 3.8455 = 6.4092 < 8.3320] w=0.3555 to align
# Constraint # added constraint: constraint((T0356)A74.CB, (T0356)A84.CB) [> 3.9801 = 6.6334 < 8.6234] w=0.3549 to align
# Constraint # added constraint: constraint((T0356)V265.CB, (T0356)T310.CB) [> 3.6731 = 6.1218 < 7.9583] w=0.3547 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)T395.CB) [> 3.3986 = 5.6643 < 7.3636] w=0.3539 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)Y394.CB) [> 2.9228 = 4.8714 < 6.3328] w=0.3522 to align
# Constraint # added constraint: constraint((T0356)W415.CB, (T0356)I481.CB) [> 3.3505 = 5.5843 < 7.2595] w=0.3513 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)Y363.CB) [> 4.7464 = 7.9107 < 10.2839] w=0.3513 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)C64.CB) [> 3.4995 = 5.8325 < 7.5822] w=0.3512 to align
# Constraint # added constraint: constraint((T0356)I228.CB, (T0356)A243.CB) [> 4.3330 = 7.2217 < 9.3882] w=0.3509 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)L85.CB) [> 3.9728 = 6.6213 < 8.6077] w=0.3506 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)I417.CB) [> 3.2227 = 5.3712 < 6.9825] w=0.3500 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)T369.CB) [> 3.7555 = 6.2591 < 8.1368] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)V368.CB) [> 3.6804 = 6.1340 < 7.9742] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)T369.CB) [> 3.3895 = 5.6491 < 7.3438] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)I370.CB) [> 4.3476 = 7.2460 < 9.4198] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)V367.CB) [> 4.4558 = 7.4263 < 9.6542] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)A366.CB) [> 3.7148 = 6.1913 < 8.0487] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)V367.CB) [> 3.2044 = 5.3407 < 6.9429] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)V368.CB) [> 4.0309 = 6.7182 < 8.7336] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)L365.CB) [> 3.3343 = 5.5572 < 7.2244] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)L365.CB) [> 2.6984 = 4.4973 < 5.8465] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)V368.CB) [> 3.7772 = 6.2953 < 8.1839] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)T369.CB) [> 2.1353 = 3.5589 < 4.6266] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)V368.CB) [> 4.6245 = 7.7074 < 10.0196] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)A366.CB) [> 3.1418 = 5.2362 < 6.8071] w=0.3488 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)F354.CB) [> 4.0860 = 6.8100 < 8.8530] w=0.3487 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)R425.CB) [> 3.9325 = 6.5542 < 8.5205] w=0.3487 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)E431.CB) [> 3.8665 = 6.4441 < 8.3773] w=0.3482 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)V352.CB) [> 4.4355 = 7.3924 < 9.6102] w=0.3473 to align
# Constraint # added constraint: constraint((T0356)R167.CB, (T0356)D202.CB) [> 4.0010 = 6.6683 < 8.6688] w=0.3459 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)A220.CB) [> 3.7564 = 6.2606 < 8.1388] w=0.3459 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)V217.CB) [> 3.7126 = 6.1876 < 8.0439] w=0.3459 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)A220.CB) [> 4.2444 = 7.0740 < 9.1962] w=0.3459 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)S218.CB) [> 3.9543 = 6.5904 < 8.5675] w=0.3459 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)V217.CB) [> 3.5557 = 5.9262 < 7.7041] w=0.3459 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)V381.CB) [> 4.0781 = 6.7968 < 8.8358] w=0.3451 to align
# Constraint # added constraint: constraint((T0356)P70.CB, (T0356)L85.CB) [> 3.9148 = 6.5247 < 8.4821] w=0.3432 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)V352.CB) [> 3.3794 = 5.6323 < 7.3220] w=0.3384 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)K257.CB) [> 3.3021 = 5.5034 < 7.1545] w=0.3365 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)V255.CB) [> 4.1200 = 6.8666 < 8.9266] w=0.3365 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)E254.CB) [> 4.1044 = 6.8407 < 8.8929] w=0.3365 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)K252.CB) [> 4.3480 = 7.2466 < 9.4206] w=0.3365 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)K252.CB) [> 2.6460 = 4.4100 < 5.7330] w=0.3365 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)A378.CB) [> 3.1714 = 5.2857 < 6.8714] w=0.3353 to align
# Constraint # added constraint: constraint((T0356)L9.CB, (T0356)I38.CB) [> 2.5835 = 4.3059 < 5.5976] w=0.3352 to align
# Constraint # added constraint: constraint((T0356)L9.CB, (T0356)R41.CB) [> 3.7396 = 6.2327 < 8.1025] w=0.3352 to align
# Constraint # added constraint: constraint((T0356)L9.CB, (T0356)T42.CB) [> 3.1069 = 5.1782 < 6.7316] w=0.3352 to align
# Constraint # added constraint: constraint((T0356)D454.CB, (T0356)G468.CA) [> 3.9578 = 6.5964 < 8.5753] w=0.3347 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)V428.CB) [> 3.9155 = 6.5259 < 8.4837] w=0.3307 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)D426.CB) [> 4.1356 = 6.8927 < 8.9605] w=0.3307 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)R420.CB) [> 4.1371 = 6.8951 < 8.9636] w=0.3303 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)E241.CB) [> 3.9229 = 6.5382 < 8.4997] w=0.3303 to align
# Constraint # added constraint: constraint((T0356)T369.CB, (T0356)A378.CB) [> 4.2302 = 7.0503 < 9.1654] w=0.3298 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)I399.CB) [> 3.9329 = 6.5548 < 8.5213] w=0.3297 to align
# Constraint # added constraint: constraint((T0356)N175.CB, (T0356)S195.CB) [> 3.9156 = 6.5260 < 8.4838] w=0.3294 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)P357.CB) [> 4.2372 = 7.0619 < 9.1805] w=0.3285 to align
# Constraint # added constraint: constraint((T0356)T418.CB, (T0356)G448.CA) [> 3.7668 = 6.2780 < 8.1614] w=0.3259 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)L429.CB) [> 4.5754 = 7.6256 < 9.9133] w=0.3254 to align
# Constraint # added constraint: constraint((T0356)F340.CB, (T0356)Y363.CB) [> 3.6792 = 6.1319 < 7.9715] w=0.3252 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)F354.CB) [> 3.7022 = 6.1703 < 8.0214] w=0.3233 to align
# Constraint # added constraint: constraint((T0356)A315.CB, (T0356)V352.CB) [> 3.6433 = 6.0721 < 7.8938] w=0.3233 to align
# Constraint # added constraint: constraint((T0356)L16.CB, (T0356)I38.CB) [> 4.0332 = 6.7219 < 8.7385] w=0.3233 to align
# Constraint # added constraint: constraint((T0356)M451.CB, (T0356)W485.CB) [> 4.5162 = 7.5269 < 9.7850] w=0.3225 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)H377.CB) [> 3.2491 = 5.4152 < 7.0397] w=0.3217 to align
# Constraint # added constraint: constraint((T0356)M120.CB, (T0356)S195.CB) [> 4.0401 = 6.7334 < 8.7535] w=0.3194 to align
# Constraint # added constraint: constraint((T0356)M120.CB, (T0356)W193.CB) [> 3.6084 = 6.0139 < 7.8181] w=0.3194 to align
# Constraint # added constraint: constraint((T0356)A245.CB, (T0356)V255.CB) [> 3.5512 = 5.9186 < 7.6942] w=0.3182 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)V256.CB) [> 4.2508 = 7.0846 < 9.2100] w=0.3182 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)V255.CB) [> 3.4635 = 5.7725 < 7.5042] w=0.3182 to align
# Constraint # added constraint: constraint((T0356)F392.CB, (T0356)D426.CB) [> 2.9646 = 4.9411 < 6.4234] w=0.3181 to align
# Constraint # added constraint: constraint((T0356)A455.CB, (T0356)I471.CB) [> 3.4437 = 5.7396 < 7.4614] w=0.3180 to align
# Constraint # added constraint: constraint((T0356)P325.CB, (T0356)R364.CB) [> 3.4785 = 5.7975 < 7.5367] w=0.3163 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)L365.CB) [> 3.8857 = 6.4762 < 8.4190] w=0.3157 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)V413.CB) [> 3.7392 = 6.2319 < 8.1015] w=0.3154 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)I399.CB) [> 3.9974 = 6.6623 < 8.6610] w=0.3153 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)V398.CB) [> 3.8387 = 6.3978 < 8.3172] w=0.3153 to align
# Constraint # added constraint: constraint((T0356)Y294.CB, (T0356)V303.CB) [> 3.8015 = 6.3359 < 8.2367] w=0.3135 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)F397.CB) [> 3.7863 = 6.3105 < 8.2036] w=0.3091 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)K371.CB) [> 3.8650 = 6.4417 < 8.3742] w=0.3079 to align
# Constraint # added constraint: constraint((T0356)L429.CB, (T0356)S449.CB) [> 4.3358 = 7.2263 < 9.3942] w=0.3075 to align
# Constraint # added constraint: constraint((T0356)K371.CB, (T0356)D402.CB) [> 3.3119 = 5.5199 < 7.1759] w=0.3064 to align
# Constraint # added constraint: constraint((T0356)I370.CB, (T0356)C401.CB) [> 3.9767 = 6.6279 < 8.6163] w=0.3064 to align
# Constraint # added constraint: constraint((T0356)T369.CB, (T0356)C401.CB) [> 3.5346 = 5.8909 < 7.6582] w=0.3064 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)V400.CB) [> 3.2424 = 5.4041 < 7.0253] w=0.3064 to align
# Constraint # added constraint: constraint((T0356)I38.CB, (T0356)L92.CB) [> 4.1990 = 6.9984 < 9.0979] w=0.3064 to align
# Constraint # added constraint: constraint((T0356)E34.CB, (T0356)V88.CB) [> 2.7788 = 4.6313 < 6.0207] w=0.3064 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)S319.CB) [> 3.0859 = 5.1431 < 6.6861] w=0.3063 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)H318.CB) [> 4.6668 = 7.7781 < 10.1115] w=0.3063 to align
# Constraint # added constraint: constraint((T0356)D403.CB, (T0356)V430.CB) [> 4.4025 = 7.3375 < 9.5387] w=0.3051 to align
# Constraint # added constraint: constraint((T0356)V428.CB, (T0356)K450.CB) [> 3.4912 = 5.8187 < 7.5643] w=0.3042 to align
# Constraint # added constraint: constraint((T0356)L344.CB, (T0356)L365.CB) [> 3.8705 = 6.4509 < 8.3862] w=0.3007 to align
# Constraint # added constraint: constraint((T0356)T418.CB, (T0356)L447.CB) [> 3.9530 = 6.5883 < 8.5649] w=0.3006 to align
# Constraint # added constraint: constraint((T0356)A200.CB, (T0356)A243.CB) [> 3.2892 = 5.4820 < 7.1266] w=0.3001 to align
# Constraint # added constraint: constraint((T0356)N54.CB, (T0356)N65.CB) [> 3.7919 = 6.3199 < 8.2158] w=0.3001 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)N65.CB) [> 2.9734 = 4.9556 < 6.4423] w=0.3001 to align
# Constraint # added constraint: constraint((T0356)L43.CB, (T0356)M60.CB) [> 4.1161 = 6.8603 < 8.9183] w=0.3001 to align
# Constraint # added constraint: constraint((T0356)A39.CB, (T0356)M60.CB) [> 3.7168 = 6.1946 < 8.0530] w=0.3001 to align
# Constraint # added constraint: constraint((T0356)N296.CB, (T0356)D327.CB) [> 4.1049 = 6.8415 < 8.8939] w=0.2973 to align
# Constraint # added constraint: constraint((T0356)N296.CB, (T0356)P326.CB) [> 2.2700 = 3.7834 < 4.9184] w=0.2973 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)W193.CB) [> 3.9059 = 6.5098 < 8.4627] w=0.2973 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)R192.CB) [> 3.6942 = 6.1570 < 8.0042] w=0.2973 to align
# Constraint # added constraint: constraint((T0356)L176.CB, (T0356)S195.CB) [> 2.7568 = 4.5946 < 5.9730] w=0.2973 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)R364.CB) [> 4.0110 = 6.6849 < 8.6904] w=0.2967 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)R364.CB) [> 3.9689 = 6.6149 < 8.5994] w=0.2967 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)S362.CB) [> 3.3011 = 5.5019 < 7.1525] w=0.2967 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)S362.CB) [> 2.4678 = 4.1130 < 5.3469] w=0.2967 to align
# Constraint # added constraint: constraint((T0356)F215.CB, (T0356)A315.CB) [> 4.1439 = 6.9065 < 8.9784] w=0.2955 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)M382.CB) [> 4.2219 = 7.0364 < 9.1474] w=0.2949 to align
# Constraint # added constraint: constraint((T0356)L344.CB, (T0356)F388.CB) [> 4.2823 = 7.1372 < 9.2783] w=0.2949 to align
# Constraint # added constraint: constraint((T0356)L16.CB, (T0356)V73.CB) [> 4.5866 = 7.6444 < 9.9377] w=0.2943 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)T433.CB) [> 3.3859 = 5.6432 < 7.3361] w=0.2943 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)N432.CB) [> 4.4067 = 7.3445 < 9.5478] w=0.2943 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)A366.CB) [> 3.9160 = 6.5266 < 8.4846] w=0.2936 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)C258.CB) [> 3.5759 = 5.9599 < 7.7478] w=0.2933 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)S268.CB) [> 4.6624 = 7.7706 < 10.1018] w=0.2933 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)A267.CB) [> 3.7643 = 6.2738 < 8.1560] w=0.2933 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)G323.CA) [> 4.0608 = 6.7680 < 8.7984] w=0.2932 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)A378.CB) [> 4.2541 = 7.0902 < 9.2173] w=0.2931 to align
# Constraint # added constraint: constraint((T0356)F215.CB, (T0356)E254.CB) [> 3.2257 = 5.3762 < 6.9891] w=0.2916 to align
# Constraint # added constraint: constraint((T0356)F108.CB, (T0356)R124.CB) [> 4.5022 = 7.5036 < 9.7547] w=0.2909 to align
# Constraint # added constraint: constraint((T0356)N432.CB, (T0356)S445.CB) [> 4.0257 = 6.7096 < 8.7224] w=0.2892 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)D353.CB) [> 4.0859 = 6.8098 < 8.8528] w=0.2876 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)V368.CB) [> 3.4039 = 5.6731 < 7.3751] w=0.2849 to align
# Constraint # added constraint: constraint((T0356)P349.CB, (T0356)I370.CB) [> 3.4815 = 5.8025 < 7.5433] w=0.2849 to align
# Constraint # added constraint: constraint((T0356)Q181.CB, (T0356)M191.CB) [> 3.4064 = 5.6773 < 7.3804] w=0.2823 to align
# Constraint # added constraint: constraint((T0356)Q181.CB, (T0356)R192.CB) [> 3.6388 = 6.0647 < 7.8841] w=0.2823 to align
# Constraint # added constraint: constraint((T0356)T166.CB, (T0356)L176.CB) [> 4.5564 = 7.5940 < 9.8722] w=0.2814 to align
# Constraint # added constraint: constraint((T0356)T166.CB, (T0356)N175.CB) [> 3.0567 = 5.0944 < 6.6228] w=0.2814 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)L176.CB) [> 3.1809 = 5.3015 < 6.8919] w=0.2814 to align
# Constraint # added constraint: constraint((T0356)A74.CB, (T0356)R86.CB) [> 3.5396 = 5.8994 < 7.6692] w=0.2806 to align
# Constraint # added constraint: constraint((T0356)L229.CB, (T0356)F244.CB) [> 3.6432 = 6.0720 < 7.8936] w=0.2803 to align
# Constraint # added constraint: constraint((T0356)L229.CB, (T0356)A243.CB) [> 3.5844 = 5.9739 < 7.7661] w=0.2803 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)G230.CA) [> 4.4402 = 7.4003 < 9.6204] w=0.2803 to align
# Constraint # added constraint: constraint((T0356)C207.CB, (T0356)F244.CB) [> 3.6064 = 6.0107 < 7.8139] w=0.2803 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)V352.CB) [> 3.1554 = 5.2590 < 6.8367] w=0.2777 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)I351.CB) [> 3.1525 = 5.2542 < 6.8305] w=0.2777 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)I351.CB) [> 3.9160 = 6.5266 < 8.4846] w=0.2777 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)Y355.CB) [> 3.9916 = 6.6526 < 8.6484] w=0.2777 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)R324.CB) [> 3.6242 = 6.0403 < 7.8525] w=0.2777 to align
# Constraint # added constraint: constraint((T0356)W410.CB, (T0356)L429.CB) [> 3.7440 = 6.2400 < 8.1120] w=0.2777 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)Y317.CB) [> 3.9867 = 6.6444 < 8.6377] w=0.2765 to align
# Constraint # added constraint: constraint((T0356)N261.CB, (T0356)Y276.CB) [> 3.8106 = 6.3509 < 8.2562] w=0.2753 to align
# Constraint # added constraint: constraint((T0356)I228.CB, (T0356)A245.CB) [> 4.0585 = 6.7642 < 8.7934] w=0.2753 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)T419.CB) [> 3.0909 = 5.1515 < 6.6970] w=0.2747 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)K371.CB) [> 4.6777 = 7.7962 < 10.1350] w=0.2729 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)V398.CB) [> 3.6790 = 6.1316 < 7.9711] w=0.2708 to align
# Constraint # added constraint: constraint((T0356)A231.CB, (T0356)E241.CB) [> 2.7418 = 4.5697 < 5.9406] w=0.2695 to align
# Constraint # added constraint: constraint((T0356)G230.CA, (T0356)E241.CB) [> 4.0258 = 6.7096 < 8.7225] w=0.2695 to align
# Constraint # added constraint: constraint((T0356)G448.CA, (T0356)I490.CB) [> 3.6350 = 6.0583 < 7.8757] w=0.2694 to align
# Constraint # added constraint: constraint((T0356)F392.CB, (T0356)L447.CB) [> 3.1062 = 5.1770 < 6.7301] w=0.2687 to align
# Constraint # added constraint: constraint((T0356)K71.CB, (T0356)F104.CB) [> 4.1586 = 6.9311 < 9.0104] w=0.2684 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)K257.CB) [> 3.2793 = 5.4655 < 7.1052] w=0.2681 to align
# Constraint # added constraint: constraint((T0356)V428.CB, (T0356)G448.CA) [> 3.9911 = 6.6518 < 8.6474] w=0.2672 to align
# Constraint # added constraint: constraint((T0356)A200.CB, (T0356)L247.CB) [> 2.8169 = 4.6948 < 6.1032] w=0.2660 to align
# Constraint # added constraint: constraint((T0356)T456.CB, (T0356)I471.CB) [> 3.4822 = 5.8037 < 7.5448] w=0.2660 to align
# Constraint # added constraint: constraint((T0356)D224.CB, (T0356)G360.CA) [> 3.1941 = 5.3234 < 6.9205] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)D224.CB, (T0356)E359.CB) [> 3.4193 = 5.6989 < 7.4086] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)D224.CB, (T0356)P358.CB) [> 3.0945 = 5.1575 < 6.7047] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)D224.CB, (T0356)P357.CB) [> 3.8126 = 6.3544 < 8.2607] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)I259.CB) [> 3.7319 = 6.2199 < 8.0858] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)Y242.CB) [> 3.8433 = 6.4056 < 8.3272] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)L356.CB) [> 3.7265 = 6.2108 < 8.0741] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)L356.CB) [> 4.4824 = 7.4707 < 9.7119] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)F354.CB) [> 3.9466 = 6.5777 < 8.5510] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)D353.CB) [> 3.9950 = 6.6583 < 8.6558] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)F215.CB, (T0356)V352.CB) [> 3.9207 = 6.5346 < 8.4950] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)D40.CB, (T0356)W206.CB) [> 3.4614 = 5.7691 < 7.4998] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)E37.CB, (T0356)Y203.CB) [> 2.8643 = 4.7738 < 6.2059] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)V428.CB, (T0356)L438.CB) [> 3.6146 = 6.0244 < 7.8317] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)T427.CB, (T0356)L438.CB) [> 4.5473 = 7.5788 < 9.8524] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)L438.CB) [> 3.3575 = 5.5958 < 7.2746] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)A416.CB, (T0356)R425.CB) [> 3.9454 = 6.5757 < 8.5484] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)V413.CB, (T0356)D436.CB) [> 4.1467 = 6.9112 < 8.9846] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)V413.CB, (T0356)L429.CB) [> 4.1650 = 6.9416 < 9.0241] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)T427.CB) [> 2.8749 = 4.7914 < 6.2288] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)V381.CB, (T0356)I435.CB) [> 2.8906 = 4.8177 < 6.2630] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)V430.CB) [> 4.6323 = 7.7205 < 10.0366] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)L429.CB) [> 3.7661 = 6.2769 < 8.1599] w=0.2655 to align
# Constraint # added constraint: constraint((T0356)E87.CB, (T0356)A335.CB) [> 3.9445 = 6.5742 < 8.5465] w=0.2651 to align
# Constraint # added constraint: constraint((T0356)L176.CB, (T0356)H196.CB) [> 3.9646 = 6.6076 < 8.5899] w=0.2642 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)Q174.CB) [> 3.5411 = 5.9018 < 7.6723] w=0.2634 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)M421.CB) [> 4.3403 = 7.2338 < 9.4040] w=0.2628 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)L63.CB) [> 4.3223 = 7.2038 < 9.3649] w=0.2627 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)L63.CB) [> 3.0452 = 5.0753 < 6.5979] w=0.2627 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)L63.CB) [> 4.4224 = 7.3706 < 9.5818] w=0.2627 to align
# Constraint # added constraint: constraint((T0356)S362.CB, (T0356)H377.CB) [> 3.6311 = 6.0518 < 7.8674] w=0.2627 to align
# Constraint # added constraint: constraint((T0356)S362.CB, (T0356)A378.CB) [> 3.6469 = 6.0782 < 7.9017] w=0.2627 to align
# Constraint # added constraint: constraint((T0356)I228.CB, (T0356)Y242.CB) [> 3.5106 = 5.8509 < 7.6062] w=0.2624 to align
# Constraint # added constraint: constraint((T0356)T122.CB, (T0356)V219.CB) [> 4.7111 = 7.8518 < 10.2074] w=0.2624 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)R364.CB) [> 4.0636 = 6.7727 < 8.8046] w=0.2623 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)F244.CB) [> 4.7413 = 7.9021 < 10.2728] w=0.2617 to align
# Constraint # added constraint: constraint((T0356)E328.CB, (T0356)L356.CB) [> 3.5231 = 5.8718 < 7.6334] w=0.2602 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)K372.CB) [> 4.6518 = 7.7530 < 10.0789] w=0.2602 to align
# Constraint # added constraint: constraint((T0356)D402.CB, (T0356)V430.CB) [> 3.3073 = 5.5122 < 7.1659] w=0.2602 to align
# Constraint # added constraint: constraint((T0356)D402.CB, (T0356)N432.CB) [> 4.7832 = 7.9720 < 10.3636] w=0.2597 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)F397.CB) [> 4.1507 = 6.9178 < 8.9931] w=0.2597 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)F397.CB) [> 3.7862 = 6.3103 < 8.2034] w=0.2597 to align
# Constraint # added constraint: constraint((T0356)N187.CB, (T0356)V306.CB) [> 2.6593 = 4.4321 < 5.7618] w=0.2591 to align
# Constraint # added constraint: constraint((T0356)L189.CB, (T0356)L273.CB) [> 3.6867 = 6.1444 < 7.9877] w=0.2591 to align
# Constraint # added constraint: constraint((T0356)L189.CB, (T0356)V306.CB) [> 3.5818 = 5.9696 < 7.7605] w=0.2591 to align
# Constraint # added constraint: constraint((T0356)I190.CB, (T0356)V303.CB) [> 3.8756 = 6.4594 < 8.3972] w=0.2591 to align
# Constraint # added constraint: constraint((T0356)I190.CB, (T0356)F304.CB) [> 4.5225 = 7.5376 < 9.7989] w=0.2591 to align
# Constraint # added constraint: constraint((T0356)L273.CB, (T0356)V306.CB) [> 3.3493 = 5.5822 < 7.2568] w=0.2591 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)P326.CB) [> 4.1666 = 6.9443 < 9.0276] w=0.2579 to align
# Constraint # added constraint: constraint((T0356)M421.CB, (T0356)D474.CB) [> 3.6246 = 6.0410 < 7.8533] w=0.2576 to align
# Constraint # added constraint: constraint((T0356)W206.CB, (T0356)F244.CB) [> 3.4084 = 5.6807 < 7.3849] w=0.2565 to align
# Constraint # added constraint: constraint((T0356)Y179.CB, (T0356)W193.CB) [> 3.9651 = 6.6085 < 8.5910] w=0.2558 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)V219.CB) [> 3.6896 = 6.1493 < 7.9941] w=0.2548 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)A220.CB) [> 3.6357 = 6.0595 < 7.8773] w=0.2548 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)A220.CB) [> 2.6570 = 4.4284 < 5.7569] w=0.2548 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)G222.CA) [> 4.0704 = 6.7840 < 8.8192] w=0.2548 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)L176.CB) [> 4.0882 = 6.8137 < 8.8578] w=0.2548 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)G199.CA) [> 4.1446 = 6.9078 < 8.9801] w=0.2548 to align
# Constraint # added constraint: constraint((T0356)N175.CB, (T0356)S240.CB) [> 3.8655 = 6.4424 < 8.3752] w=0.2548 to align
# Constraint # added constraint: constraint((T0356)L176.CB, (T0356)S240.CB) [> 3.8438 = 6.4064 < 8.3283] w=0.2548 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)G275.CA) [> 3.6704 = 6.1173 < 7.9524] w=0.2548 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)G275.CA) [> 4.5246 = 7.5410 < 9.8033] w=0.2548 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)F304.CB) [> 4.1625 = 6.9375 < 9.0187] w=0.2545 to align
# Constraint # added constraint: constraint((T0356)L194.CB, (T0356)P302.CB) [> 4.1444 = 6.9073 < 8.9795] w=0.2545 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)Y321.CB) [> 2.9991 = 4.9984 < 6.4980] w=0.2531 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)I316.CB) [> 3.9024 = 6.5040 < 8.4552] w=0.2524 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)H318.CB) [> 3.5491 = 5.9152 < 7.6897] w=0.2524 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)Y317.CB) [> 3.0039 = 5.0065 < 6.5084] w=0.2524 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)I316.CB) [> 4.4130 = 7.3550 < 9.5615] w=0.2524 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)H318.CB) [> 2.9654 = 4.9424 < 6.4251] w=0.2524 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)H318.CB) [> 4.1857 = 6.9762 < 9.0690] w=0.2524 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)V398.CB) [> 4.3825 = 7.3042 < 9.4954] w=0.2522 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)A378.CB) [> 4.6014 = 7.6690 < 9.9697] w=0.2509 to align
# Constraint # added constraint: constraint((T0356)H291.CB, (T0356)T307.CB) [> 4.4459 = 7.4098 < 9.6327] w=0.2509 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)L429.CB) [> 4.1525 = 6.9208 < 8.9970] w=0.2496 to align
# Constraint # added constraint: constraint((T0356)R380.CB, (T0356)D409.CB) [> 3.9100 = 6.5166 < 8.4715] w=0.2496 to align
# Constraint # added constraint: constraint((T0356)R380.CB, (T0356)V405.CB) [> 4.3495 = 7.2491 < 9.4239] w=0.2496 to align
# Constraint # added constraint: constraint((T0356)K379.CB, (T0356)D404.CB) [> 3.3757 = 5.6261 < 7.3139] w=0.2496 to align
# Constraint # added constraint: constraint((T0356)E328.CB, (T0356)P357.CB) [> 3.1461 = 5.2435 < 6.8165] w=0.2494 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)F354.CB) [> 4.0624 = 6.7706 < 8.8018] w=0.2480 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)I259.CB) [> 3.7778 = 6.2964 < 8.1853] w=0.2480 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)G246.CA) [> 3.9418 = 6.5696 < 8.5405] w=0.2480 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)I399.CB) [> 3.7116 = 6.1860 < 8.0419] w=0.2478 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)C401.CB) [> 4.1368 = 6.8946 < 8.9630] w=0.2478 to align
# Constraint # added constraint: constraint((T0356)I370.CB, (T0356)D402.CB) [> 3.6429 = 6.0715 < 7.8929] w=0.2478 to align
# Constraint # added constraint: constraint((T0356)A39.CB, (T0356)L50.CB) [> 3.7837 = 6.3062 < 8.1980] w=0.2475 to align
# Constraint # added constraint: constraint((T0356)M451.CB, (T0356)I490.CB) [> 4.2511 = 7.0852 < 9.2107] w=0.2474 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)W410.CB) [> 3.1565 = 5.2608 < 6.8390] w=0.2449 to align
# Constraint # added constraint: constraint((T0356)Y363.CB, (T0356)A378.CB) [> 3.2796 = 5.4659 < 7.1057] w=0.2425 to align
# Constraint # added constraint: constraint((T0356)F215.CB, (T0356)Y317.CB) [> 3.6212 = 6.0353 < 7.8459] w=0.2423 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)I316.CB) [> 2.8255 = 4.7091 < 6.1218] w=0.2423 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)Y317.CB) [> 4.5622 = 7.6036 < 9.8847] w=0.2423 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)H318.CB) [> 4.5358 = 7.5597 < 9.8276] w=0.2423 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)S319.CB) [> 3.2080 = 5.3466 < 6.9506] w=0.2423 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)H318.CB) [> 3.3310 = 5.5517 < 7.2172] w=0.2423 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)S319.CB) [> 4.2294 = 7.0490 < 9.1637] w=0.2423 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)I417.CB) [> 3.8590 = 6.4316 < 8.3611] w=0.2423 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)V62.CB) [> 4.1396 = 6.8993 < 8.9691] w=0.2422 to align
# Constraint # added constraint: constraint((T0356)L332.CB, (T0356)D474.CB) [> 2.7336 = 4.5560 < 5.9228] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)V331.CB, (T0356)D474.CB) [> 2.3997 = 3.9996 < 5.1995] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)V331.CB, (T0356)K472.CB) [> 2.8984 = 4.8307 < 6.2799] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)P329.CB, (T0356)D474.CB) [> 3.8122 = 6.3536 < 8.2597] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)S362.CB) [> 3.5815 = 5.9693 < 7.7600] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)A366.CB) [> 4.5862 = 7.6437 < 9.9368] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)L365.CB) [> 2.8544 = 4.7574 < 6.1846] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)A366.CB) [> 3.1422 = 5.2370 < 6.8081] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)L365.CB) [> 4.4246 = 7.3743 < 9.5866] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)R364.CB) [> 3.8927 = 6.4879 < 8.4342] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)V367.CB) [> 2.9587 = 4.9312 < 6.4106] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)A366.CB) [> 4.3330 = 7.2217 < 9.3882] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)I316.CB, (T0356)V367.CB) [> 4.3119 = 7.1865 < 9.3425] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)F392.CB, (T0356)V430.CB) [> 4.7113 = 7.8522 < 10.2079] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)F392.CB, (T0356)D403.CB) [> 3.3920 = 5.6534 < 7.3494] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)E338.CB, (T0356)T433.CB) [> 4.1437 = 6.9061 < 8.9780] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)V334.CB, (T0356)D474.CB) [> 4.7221 = 7.8702 < 10.2313] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)G333.CA, (T0356)D474.CB) [> 4.7224 = 7.8706 < 10.2318] w=0.2421 to align
# Constraint # added constraint: constraint((T0356)E34.CB, (T0356)E87.CB) [> 2.5979 = 4.3298 < 5.6288] w=0.2417 to align
# Constraint # added constraint: constraint((T0356)E34.CB, (T0356)L91.CB) [> 4.1623 = 6.9372 < 9.0184] w=0.2417 to align
# Constraint # added constraint: constraint((T0356)G293.CA, (T0356)P358.CB) [> 3.3960 = 5.6599 < 7.3579] w=0.2415 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)I259.CB) [> 3.9589 = 6.5982 < 8.5777] w=0.2415 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)K257.CB) [> 4.2218 = 7.0363 < 9.1472] w=0.2415 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)K115.CB) [> 3.7864 = 6.3106 < 8.2038] w=0.2415 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)L111.CB) [> 3.9820 = 6.6366 < 8.6276] w=0.2415 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)L92.CB) [> 3.9105 = 6.5174 < 8.4727] w=0.2409 to align
# Constraint # added constraint: constraint((T0356)G68.CA, (T0356)E80.CB) [> 4.4412 = 7.4020 < 9.6226] w=0.2409 to align
# Constraint # added constraint: constraint((T0356)K379.CB, (T0356)W415.CB) [> 3.7612 = 6.2686 < 8.1492] w=0.2382 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)F354.CB) [> 4.6883 = 7.8137 < 10.1579] w=0.2362 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)G452.CA) [> 3.5428 = 5.9047 < 7.6761] w=0.2361 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)G452.CA) [> 3.5067 = 5.8444 < 7.5978] w=0.2361 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)L453.CB) [> 3.5659 = 5.9431 < 7.7260] w=0.2361 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)L453.CB) [> 3.9778 = 6.6297 < 8.6186] w=0.2361 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)D454.CB) [> 3.5030 = 5.8384 < 7.5899] w=0.2361 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)D454.CB) [> 4.0090 = 6.6817 < 8.6862] w=0.2361 to align
# Constraint # added constraint: constraint((T0356)V428.CB, (T0356)Y437.CB) [> 4.1051 = 6.8418 < 8.8944] w=0.2357 to align
# Constraint # added constraint: constraint((T0356)A39.CB, (T0356)K96.CB) [> 4.0538 = 6.7563 < 8.7832] w=0.2356 to align
# Constraint # added constraint: constraint((T0356)L13.CB, (T0356)R24.CB) [> 3.8992 = 6.4987 < 8.4482] w=0.2337 to align
# Constraint # added constraint: constraint((T0356)L13.CB, (T0356)L22.CB) [> 3.5451 = 5.9085 < 7.6811] w=0.2337 to align
# Constraint # added constraint: constraint((T0356)L91.CB, (T0356)F114.CB) [> 4.3977 = 7.3295 < 9.5283] w=0.2336 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)I417.CB) [> 4.0108 = 6.6846 < 8.6900] w=0.2331 to align
# Constraint # added constraint: constraint((T0356)L263.CB, (T0356)E281.CB) [> 3.4217 = 5.7028 < 7.4136] w=0.2323 to align
# Constraint # added constraint: constraint((T0356)T418.CB, (T0356)S442.CB) [> 3.1354 = 5.2257 < 6.7934] w=0.2316 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)S442.CB) [> 3.6105 = 6.0176 < 7.8229] w=0.2316 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)N175.CB) [> 4.1047 = 6.8411 < 8.8934] w=0.2313 to align
# Constraint # added constraint: constraint((T0356)I38.CB, (T0356)L51.CB) [> 4.6790 = 7.7983 < 10.1378] w=0.2296 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)T164.CB) [> 4.1110 = 6.8517 < 8.9072] w=0.2296 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)T164.CB) [> 4.4492 = 7.4153 < 9.6399] w=0.2296 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)A223.CB) [> 3.0117 = 5.0195 < 6.5254] w=0.2296 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)R364.CB) [> 3.5075 = 5.8459 < 7.5997] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)M382.CB) [> 3.2671 = 5.4452 < 7.0787] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)V381.CB) [> 4.7548 = 7.9246 < 10.3020] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)A378.CB) [> 3.6321 = 6.0534 < 7.8694] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)V368.CB) [> 2.9723 = 4.9539 < 6.4400] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)A366.CB) [> 4.5301 = 7.5501 < 9.8152] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)A378.CB) [> 2.5963 = 4.3271 < 5.6252] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)H377.CB) [> 4.5628 = 7.6046 < 9.8860] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)Y374.CB) [> 3.2103 = 5.3504 < 6.9556] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)A378.CB) [> 4.2515 = 7.0858 < 9.2116] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)M382.CB) [> 4.7379 = 7.8965 < 10.2655] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)H377.CB) [> 4.5965 = 7.6608 < 9.9590] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)P326.CB, (T0356)G360.CA) [> 4.1546 = 6.9244 < 9.0017] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)A366.CB) [> 3.3533 = 5.5889 < 7.2656] w=0.2278 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)A245.CB) [> 3.7932 = 6.3220 < 8.2186] w=0.2270 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)V256.CB) [> 4.1937 = 6.9894 < 9.0863] w=0.2270 to align
# Constraint # added constraint: constraint((T0356)E431.CB, (T0356)P443.CB) [> 3.0293 = 5.0489 < 6.5635] w=0.2261 to align
# Constraint # added constraint: constraint((T0356)E431.CB, (T0356)S442.CB) [> 3.2516 = 5.4193 < 7.0451] w=0.2261 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)G127.CA) [> 3.9125 = 6.5208 < 8.4771] w=0.2230 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)G127.CA) [> 4.4639 = 7.4398 < 9.6717] w=0.2230 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)R126.CB) [> 4.3643 = 7.2739 < 9.4560] w=0.2230 to align
# Constraint # added constraint: constraint((T0356)G177.CA, (T0356)L194.CB) [> 3.5561 = 5.9268 < 7.7049] w=0.2229 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)G177.CA) [> 4.5272 = 7.5454 < 9.8090] w=0.2225 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)G177.CA) [> 3.7006 = 6.1676 < 8.0178] w=0.2225 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)I178.CB) [> 3.3166 = 5.5277 < 7.1860] w=0.2225 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)I178.CB) [> 3.5507 = 5.9179 < 7.6932] w=0.2225 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)T418.CB) [> 4.6007 = 7.6678 < 9.9681] w=0.2208 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)T418.CB) [> 3.2651 = 5.4418 < 7.0744] w=0.2208 to align
# Constraint # added constraint: constraint((T0356)D404.CB, (T0356)I417.CB) [> 4.4370 = 7.3950 < 9.6135] w=0.2208 to align
# Constraint # added constraint: constraint((T0356)D404.CB, (T0356)T418.CB) [> 2.3092 = 3.8486 < 5.0032] w=0.2208 to align
# Constraint # added constraint: constraint((T0356)D404.CB, (T0356)T419.CB) [> 3.3461 = 5.5769 < 7.2500] w=0.2208 to align
# Constraint # added constraint: constraint((T0356)D404.CB, (T0356)D422.CB) [> 4.6518 = 7.7530 < 10.0789] w=0.2208 to align
# Constraint # added constraint: constraint((T0356)T418.CB, (T0356)V428.CB) [> 4.0178 = 6.6964 < 8.7053] w=0.2208 to align
# Constraint # added constraint: constraint((T0356)I471.CB, (T0356)I481.CB) [> 4.0805 = 6.8008 < 8.8410] w=0.2208 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)Y317.CB) [> 3.1135 = 5.1891 < 6.7459] w=0.2203 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)Y317.CB) [> 3.8848 = 6.4747 < 8.4171] w=0.2203 to align
# Constraint # added constraint: constraint((T0356)D454.CB, (T0356)W467.CB) [> 3.1407 = 5.2344 < 6.8048] w=0.2195 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)V368.CB) [> 3.8681 = 6.4468 < 8.3808] w=0.2191 to align
# Constraint # added constraint: constraint((T0356)K396.CB, (T0356)K450.CB) [> 3.1470 = 5.2449 < 6.8184] w=0.2184 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)L163.CB) [> 4.1360 = 6.8934 < 8.9614] w=0.2177 to align
# Constraint # added constraint: constraint((T0356)Y179.CB, (T0356)I190.CB) [> 3.8789 = 6.4649 < 8.4043] w=0.2174 to align
# Constraint # added constraint: constraint((T0356)M421.CB, (T0356)K450.CB) [> 4.4312 = 7.3853 < 9.6009] w=0.2164 to align
# Constraint # added constraint: constraint((T0356)M383.CB, (T0356)M421.CB) [> 3.8640 = 6.4399 < 8.3719] w=0.2147 to align
# Constraint # added constraint: constraint((T0356)G384.CA, (T0356)M421.CB) [> 4.7788 = 7.9647 < 10.3541] w=0.2147 to align
# Constraint # added constraint: constraint((T0356)R180.CB, (T0356)M191.CB) [> 3.3255 = 5.5425 < 7.2052] w=0.2141 to align
# Constraint # added constraint: constraint((T0356)G177.CA, (T0356)S195.CB) [> 3.4982 = 5.8304 < 7.5795] w=0.2141 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)Y179.CB) [> 4.6039 = 7.6732 < 9.9752] w=0.2136 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)Y179.CB) [> 3.4396 = 5.7326 < 7.4524] w=0.2136 to align
# Constraint # added constraint: constraint((T0356)L91.CB, (T0356)K110.CB) [> 3.6141 = 6.0236 < 7.8306] w=0.2131 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)A220.CB) [> 3.6776 = 6.1293 < 7.9681] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)L248.CB) [> 3.3600 = 5.6000 < 7.2800] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)W206.CB, (T0356)V217.CB) [> 2.4874 = 4.1457 < 5.3894] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)W206.CB, (T0356)A220.CB) [> 3.5638 = 5.9397 < 7.7216] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)C207.CB, (T0356)E254.CB) [> 4.3369 = 7.2282 < 9.3967] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)F244.CB) [> 4.7333 = 7.8888 < 10.2554] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)L263.CB, (T0356)K450.CB) [> 4.2789 = 7.1315 < 9.2709] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)V265.CB, (T0356)I351.CB) [> 3.8721 = 6.4534 < 8.3895] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)V265.CB, (T0356)S449.CB) [> 4.5008 = 7.5013 < 9.7517] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)V265.CB, (T0356)K450.CB) [> 3.5227 = 5.8712 < 7.6325] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)A267.CB, (T0356)W386.CB) [> 2.2332 = 3.7221 < 4.8387] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)A267.CB, (T0356)S387.CB) [> 4.5082 = 7.5136 < 9.7676] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)P48.CB, (T0356)P61.CB) [> 3.3083 = 5.5139 < 7.1680] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)M60.CB) [> 3.1660 = 5.2766 < 6.8596] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)P61.CB) [> 2.8615 = 4.7692 < 6.1999] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)V62.CB) [> 4.3031 = 7.1718 < 9.3234] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)M60.CB) [> 3.9751 = 6.6251 < 8.6127] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)P61.CB) [> 4.0459 = 6.7432 < 8.7662] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)V62.CB) [> 2.6351 = 4.3918 < 5.7093] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)N54.CB, (T0356)F67.CB) [> 2.7435 = 4.5724 < 5.9442] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)P55.CB, (T0356)F67.CB) [> 3.6956 = 6.1593 < 8.0071] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)H196.CB, (T0356)Y242.CB) [> 4.4711 = 7.4519 < 9.6874] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)A200.CB, (T0356)F244.CB) [> 3.4514 = 5.7524 < 7.4781] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)L201.CB, (T0356)L247.CB) [> 4.6813 = 7.8022 < 10.1428] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)N457.CB, (T0356)R469.CB) [> 4.5970 = 7.6616 < 9.9601] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)T456.CB, (T0356)P470.CB) [> 3.1034 = 5.1724 < 6.7241] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)T456.CB, (T0356)R469.CB) [> 4.3839 = 7.3066 < 9.4985] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)A455.CB, (T0356)V477.CB) [> 2.7165 = 4.5275 < 5.8857] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)M383.CB, (T0356)T419.CB) [> 3.0621 = 5.1034 < 6.6345] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)G360.CA, (T0356)D409.CB) [> 4.6308 = 7.7180 < 10.0334] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)E359.CB, (T0356)D409.CB) [> 3.0190 = 5.0317 < 6.5411] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)V400.CB) [> 3.8282 = 6.3804 < 8.2945] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)I399.CB) [> 3.6527 = 6.0878 < 7.9141] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)L389.CB) [> 3.8499 = 6.4165 < 8.3415] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)D353.CB) [> 3.6138 = 6.0230 < 7.8299] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)D353.CB) [> 4.4973 = 7.4955 < 9.7441] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)Y355.CB) [> 4.0399 = 6.7331 < 8.7530] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)L332.CB, (T0356)P357.CB) [> 4.0127 = 6.6879 < 8.6942] w=0.2117 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)C64.CB) [> 4.1238 = 6.8729 < 8.9348] w=0.2101 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)V62.CB) [> 3.9489 = 6.5815 < 8.5560] w=0.2101 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)I159.CB) [> 3.9609 = 6.6015 < 8.5820] w=0.2101 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)M451.CB) [> 4.5833 = 7.6389 < 9.9305] w=0.2095 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)M451.CB) [> 3.9555 = 6.5925 < 8.5703] w=0.2095 to align
# Constraint # added constraint: constraint((T0356)D402.CB, (T0356)V444.CB) [> 4.2195 = 7.0325 < 9.1423] w=0.2093 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)A378.CB) [> 4.0665 = 6.7775 < 8.8107] w=0.2077 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)H377.CB) [> 3.0966 = 5.1610 < 6.7094] w=0.2077 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)I435.CB) [> 4.1949 = 6.9915 < 9.0889] w=0.2058 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)F440.CB) [> 4.1403 = 6.9006 < 8.9708] w=0.2058 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)L221.CB) [> 4.4645 = 7.4409 < 9.6731] w=0.2050 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)V219.CB) [> 4.0913 = 6.8189 < 8.8646] w=0.2050 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)S218.CB) [> 4.1925 = 6.9875 < 9.0837] w=0.2050 to align
# Constraint # added constraint: constraint((T0356)R192.CB, (T0356)V303.CB) [> 3.2786 = 5.4643 < 7.1036] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)R192.CB, (T0356)V298.CB) [> 4.2703 = 7.1172 < 9.2524] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L189.CB, (T0356)G275.CA) [> 4.2583 = 7.0971 < 9.2262] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L189.CB, (T0356)V219.CB) [> 3.7387 = 6.2312 < 8.1005] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)K188.CB, (T0356)E278.CB) [> 3.9578 = 6.5963 < 8.5752] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)N187.CB, (T0356)I309.CB) [> 4.5672 = 7.6121 < 9.8957] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Q182.CB, (T0356)M191.CB) [> 3.1653 = 5.2754 < 6.8580] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)V232.CB) [> 3.0518 = 5.0863 < 6.6122] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)A231.CB) [> 3.4844 = 5.8073 < 7.5496] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)L229.CB) [> 4.3022 = 7.1703 < 9.3213] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)I228.CB) [> 3.2452 = 5.4087 < 7.0312] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G177.CA, (T0356)V232.CB) [> 3.8357 = 6.3929 < 8.3108] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G177.CA, (T0356)A231.CB) [> 2.7297 = 4.5496 < 5.9145] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L176.CB, (T0356)P266.CB) [> 4.2192 = 7.0319 < 9.1415] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)N261.CB) [> 4.5727 = 7.6212 < 9.9075] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)I277.CB) [> 3.9216 = 6.5360 < 8.4967] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)Y276.CB) [> 3.4311 = 5.7184 < 7.4340] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)G275.CA) [> 3.6212 = 6.0353 < 7.8459] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)E274.CB) [> 4.6482 = 7.7470 < 10.0711] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)L263.CB) [> 3.3492 = 5.5820 < 7.2567] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)N261.CB) [> 2.4901 = 4.1502 < 5.3952] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Q204.CB, (T0356)Y295.CB) [> 4.0093 = 6.6821 < 8.6867] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Q204.CB, (T0356)I277.CB) [> 4.7926 = 7.9877 < 10.3840] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)Y295.CB) [> 3.8897 = 6.4829 < 8.4277] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)I277.CB) [> 3.2881 = 5.4801 < 7.1241] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)V217.CB) [> 3.2227 = 5.3712 < 6.9825] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)P216.CB) [> 4.2228 = 7.0380 < 9.1494] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A200.CB, (T0356)Y295.CB) [> 4.4608 = 7.4346 < 9.6650] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)D237.CB) [> 4.2130 = 7.0216 < 9.1281] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L194.CB, (T0356)S300.CB) [> 4.2519 = 7.0865 < 9.2125] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)T166.CB, (T0356)P216.CB) [> 4.1820 = 6.9700 < 9.0610] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)T166.CB, (T0356)Y203.CB) [> 3.4754 = 5.7923 < 7.5300] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)T166.CB, (T0356)G198.CA) [> 4.3217 = 7.2028 < 9.3637] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)P266.CB) [> 3.9088 = 6.5147 < 8.4691] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)V265.CB) [> 4.3904 = 7.3174 < 9.5126] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)L263.CB) [> 2.5699 = 4.2832 < 5.5681] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)V255.CB) [> 4.1727 = 6.9545 < 9.0408] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)Y242.CB) [> 4.6169 = 7.6948 < 10.0032] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)S218.CB) [> 2.8173 = 4.6954 < 6.1041] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)Y179.CB) [> 3.4894 = 5.8157 < 7.5605] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)A269.CB) [> 4.1369 = 6.8948 < 8.9633] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)P266.CB) [> 3.5806 = 5.9677 < 7.7580] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)A231.CB) [> 3.5143 = 5.8572 < 7.6144] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)I228.CB) [> 3.2808 = 5.4680 < 7.1084] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)G177.CA) [> 3.1757 = 5.2929 < 6.8807] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)I228.CB) [> 4.3702 = 7.2837 < 9.4688] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)G222.CA) [> 3.3473 = 5.5788 < 7.2524] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)L221.CB) [> 3.8486 = 6.4143 < 8.3386] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L176.CB, (T0356)A231.CB) [> 2.8713 = 4.7855 < 6.2212] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)N175.CB, (T0356)G198.CA) [> 3.3715 = 5.6191 < 7.3048] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Q174.CB, (T0356)V255.CB) [> 3.9201 = 6.5335 < 8.4935] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Q174.CB, (T0356)Y242.CB) [> 3.9200 = 6.5334 < 8.4934] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)R167.CB, (T0356)L263.CB) [> 3.0591 = 5.0985 < 6.6281] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)R167.CB, (T0356)P216.CB) [> 4.5140 = 7.5233 < 9.7803] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)T166.CB, (T0356)L263.CB) [> 3.0181 = 5.0302 < 6.5392] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)T166.CB, (T0356)S218.CB) [> 4.7551 = 7.9251 < 10.3027] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I271.CB, (T0356)I309.CB) [> 4.6403 = 7.7338 < 10.0540] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)E270.CB, (T0356)R312.CB) [> 2.4501 = 4.0835 < 5.3085] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)E270.CB, (T0356)Q311.CB) [> 3.7938 = 6.3230 < 8.2199] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A269.CB, (T0356)R312.CB) [> 4.4907 = 7.4845 < 9.7299] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V265.CB, (T0356)E274.CB) [> 4.5334 = 7.5556 < 9.8223] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L263.CB, (T0356)E274.CB) [> 4.7380 = 7.8966 < 10.2656] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)N261.CB, (T0356)H308.CB) [> 4.3405 = 7.2342 < 9.4044] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)N261.CB, (T0356)T307.CB) [> 3.9143 = 6.5238 < 8.4810] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)N261.CB, (T0356)G275.CA) [> 3.5649 = 5.9415 < 7.7239] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)N261.CB, (T0356)E274.CB) [> 2.8985 = 4.8308 < 6.2801] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)H308.CB) [> 2.3995 = 3.9991 < 5.1988] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)T307.CB) [> 2.6046 = 4.3410 < 5.6432] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)Y276.CB) [> 4.7266 = 7.8776 < 10.2409] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)G275.CA) [> 4.5678 = 7.6131 < 9.8970] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)E274.CB) [> 2.9448 = 4.9080 < 6.3804] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)T310.CB) [> 4.2999 = 7.1666 < 9.3165] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)H308.CB) [> 2.9392 = 4.8986 < 6.3682] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)E274.CB) [> 4.0029 = 6.6714 < 8.6728] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)H308.CB) [> 4.0157 = 6.6928 < 8.7007] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)E274.CB) [> 2.9511 = 4.9185 < 6.3940] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)V272.CB) [> 4.2508 = 7.0847 < 9.2101] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)V265.CB) [> 3.1785 = 5.2975 < 6.8867] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)E278.CB, (T0356)T305.CB) [> 3.1661 = 5.2769 < 6.8599] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)E278.CB, (T0356)Y294.CB) [> 2.7294 = 4.5491 < 5.9138] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I277.CB, (T0356)F304.CB) [> 3.5275 = 5.8791 < 7.6429] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I277.CB, (T0356)Y295.CB) [> 3.9357 = 6.5595 < 8.5273] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I277.CB, (T0356)Y294.CB) [> 4.4537 = 7.4228 < 9.6496] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Y276.CB, (T0356)T307.CB) [> 3.0745 = 5.1241 < 6.6613] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G275.CA, (T0356)H308.CB) [> 4.4158 = 7.3597 < 9.5676] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G275.CA, (T0356)T307.CB) [> 3.1940 = 5.3233 < 6.9203] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G275.CA, (T0356)V306.CB) [> 3.2490 = 5.4151 < 7.0396] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)E274.CB, (T0356)T310.CB) [> 4.6384 = 7.7307 < 10.0499] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)E274.CB, (T0356)I309.CB) [> 4.1767 = 6.9611 < 9.0494] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)E274.CB, (T0356)H308.CB) [> 2.2458 = 3.7431 < 4.8660] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L273.CB, (T0356)I309.CB) [> 3.4243 = 5.7071 < 7.4192] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V272.CB, (T0356)Q311.CB) [> 4.4831 = 7.4718 < 9.7134] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V272.CB, (T0356)T310.CB) [> 2.8616 = 4.7693 < 6.2001] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V272.CB, (T0356)I309.CB) [> 4.0123 = 6.6872 < 8.6933] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V272.CB, (T0356)H308.CB) [> 4.6886 = 7.8144 < 10.1587] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I271.CB, (T0356)A315.CB) [> 3.6006 = 6.0010 < 7.8013] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I271.CB, (T0356)R312.CB) [> 4.3280 = 7.2133 < 9.3773] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I271.CB, (T0356)Q311.CB) [> 3.1639 = 5.2732 < 6.8551] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)I271.CB, (T0356)T310.CB) [> 4.5604 = 7.6006 < 9.8808] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)I271.CB) [> 2.1995 = 3.6659 < 4.7657] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)E270.CB) [> 3.2888 = 5.4813 < 7.1257] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)A269.CB) [> 3.1085 = 5.1809 < 6.7352] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)L273.CB) [> 4.7621 = 7.9368 < 10.3178] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)V272.CB) [> 3.4802 = 5.8003 < 7.5404] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)I271.CB) [> 4.3556 = 7.2593 < 9.4371] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)A269.CB) [> 2.2947 = 3.8245 < 4.9718] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)P266.CB) [> 2.6217 = 4.3696 < 5.6804] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)L273.CB) [> 2.3826 = 3.9710 < 5.1623] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)V272.CB) [> 4.2357 = 7.0595 < 9.1773] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)L273.CB) [> 3.8457 = 6.4095 < 8.3323] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)V272.CB) [> 3.3937 = 5.6561 < 7.3530] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)P266.CB) [> 4.7771 = 7.9618 < 10.3503] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)L263.CB) [> 2.8896 = 4.8159 < 6.2607] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)F304.CB) [> 4.0162 = 6.6936 < 8.7017] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)I277.CB) [> 4.4067 = 7.3446 < 9.5479] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)G275.CA) [> 3.4569 = 5.7615 < 7.4899] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)L263.CB) [> 3.4949 = 5.8248 < 7.5723] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V255.CB, (T0356)A267.CB) [> 3.7200 = 6.2000 < 8.0600] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V255.CB, (T0356)P266.CB) [> 3.2236 = 5.3726 < 6.9844] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)E254.CB, (T0356)S268.CB) [> 3.9104 = 6.5173 < 8.4724] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)E254.CB, (T0356)A267.CB) [> 2.1804 = 3.6340 < 4.7242] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)E254.CB, (T0356)P266.CB) [> 4.2072 = 7.0120 < 9.1156] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)T253.CB, (T0356)A267.CB) [> 4.3640 = 7.2734 < 9.4554] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)V272.CB) [> 4.4960 = 7.4933 < 9.7413] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)A269.CB) [> 3.4889 = 5.8149 < 7.5594] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)E270.CB) [> 4.4769 = 7.4615 < 9.6999] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)S268.CB) [> 4.1307 = 6.8844 < 8.9497] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)A269.CB) [> 4.1714 = 6.9523 < 9.0379] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)E270.CB) [> 3.2364 = 5.3939 < 7.0121] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A231.CB, (T0356)A245.CB) [> 2.9306 = 4.8843 < 6.3496] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)A231.CB, (T0356)T253.CB) [> 4.2973 = 7.1622 < 9.3108] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V235.CB, (T0356)F244.CB) [> 3.6508 = 6.0846 < 7.9100] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)E254.CB) [> 4.3555 = 7.2593 < 9.4370] w=0.2048 to align
# Constraint # added constraint: constraint((T0356)V430.CB, (T0356)K450.CB) [> 4.2548 = 7.0913 < 9.2187] w=0.2042 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)V255.CB) [> 4.4873 = 7.4788 < 9.7225] w=0.2035 to align
# Constraint # added constraint: constraint((T0356)A39.CB, (T0356)L92.CB) [> 2.9064 = 4.8440 < 6.2972] w=0.2035 to align
# Constraint # added constraint: constraint((T0356)G68.CA, (T0356)Q79.CB) [> 3.7576 = 6.2626 < 8.1413] w=0.2025 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)I399.CB) [> 2.9749 = 4.9582 < 6.4456] w=0.2025 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)V398.CB) [> 3.6151 = 6.0251 < 7.8327] w=0.1997 to align
# Constraint # added constraint: constraint((T0356)K396.CB, (T0356)D422.CB) [> 4.5162 = 7.5271 < 9.7852] w=0.1980 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)W459.CB) [> 3.4283 = 5.7139 < 7.4280] w=0.1977 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)A378.CB) [> 4.7867 = 7.9779 < 10.3712] w=0.1974 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)W410.CB) [> 3.7694 = 6.2824 < 8.1671] w=0.1948 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)V405.CB) [> 4.0920 = 6.8200 < 8.8660] w=0.1947 to align
# Constraint # added constraint: constraint((T0356)T36.CB, (T0356)M77.CB) [> 2.5365 = 4.2276 < 5.4959] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)T36.CB, (T0356)Q79.CB) [> 3.8381 = 6.3968 < 8.3159] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)A39.CB, (T0356)V73.CB) [> 3.5951 = 5.9919 < 7.7895] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)D40.CB, (T0356)G68.CA) [> 4.4634 = 7.4390 < 9.6707] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L43.CB, (T0356)G68.CA) [> 2.9681 = 4.9469 < 6.4310] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)G46.CA, (T0356)F67.CB) [> 3.9949 = 6.6582 < 8.6557] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)D8.CB, (T0356)T42.CB) [> 2.3598 = 3.9331 < 5.1130] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L9.CB, (T0356)I35.CB) [> 4.1772 = 6.9620 < 9.0506] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)R10.CB, (T0356)I38.CB) [> 4.5494 = 7.5823 < 9.8569] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)F12.CB, (T0356)I38.CB) [> 2.7209 = 4.5349 < 5.8953] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)F12.CB, (T0356)T42.CB) [> 3.7744 = 6.2907 < 8.1779] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L13.CB, (T0356)E34.CB) [> 3.8559 = 6.4265 < 8.3545] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L13.CB, (T0356)I35.CB) [> 3.6372 = 6.0619 < 7.8805] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L16.CB, (T0356)E34.CB) [> 3.7277 = 6.2128 < 8.0767] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)Q19.CB, (T0356)L95.CB) [> 3.8581 = 6.4301 < 8.3591] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)H32.CB, (T0356)G78.CA) [> 4.7450 = 7.9083 < 10.2808] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)T36.CB, (T0356)V73.CB) [> 3.3373 = 5.5621 < 7.2308] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)T36.CB, (T0356)A74.CB) [> 4.5290 = 7.5484 < 9.8129] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L111.CB, (T0356)Y203.CB) [> 3.8946 = 6.4910 < 8.4383] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L111.CB, (T0356)L229.CB) [> 3.6891 = 6.1485 < 7.9931] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)F114.CB, (T0356)L229.CB) [> 3.7507 = 6.2512 < 8.1266] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)F114.CB, (T0356)G230.CA) [> 4.1436 = 6.9061 < 8.9779] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L118.CB, (T0356)Y242.CB) [> 4.0064 = 6.6773 < 8.6805] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)P121.CB, (T0356)R249.CB) [> 4.3007 = 7.1678 < 9.3182] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)A245.CB) [> 3.4002 = 5.6670 < 7.3671] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)R249.CB) [> 3.9550 = 6.5916 < 8.5691] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)K110.CB) [> 2.4654 = 4.1090 < 5.3417] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)Q113.CB) [> 3.0082 = 5.0136 < 6.5177] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)G68.CA, (T0356)Q113.CB) [> 4.6000 = 7.6667 < 9.9667] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)T69.CB, (T0356)A226.CB) [> 3.6542 = 6.0903 < 7.9174] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)R105.CB, (T0356)P225.CB) [> 4.2157 = 7.0262 < 9.1341] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L107.CB, (T0356)P225.CB) [> 2.8077 = 4.6795 < 6.0834] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L107.CB, (T0356)I228.CB) [> 2.8371 = 4.7285 < 6.1471] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L107.CB, (T0356)L229.CB) [> 2.7949 = 4.6581 < 6.0555] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)F108.CB, (T0356)L229.CB) [> 4.6561 = 7.7602 < 10.0883] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)L111.CB, (T0356)A200.CB) [> 3.2901 = 5.4835 < 7.1285] w=0.1941 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)V400.CB) [> 4.1031 = 6.8386 < 8.8902] w=0.1936 to align
# Constraint # added constraint: constraint((T0356)P55.CB, (T0356)V73.CB) [> 4.0931 = 6.8218 < 8.8683] w=0.1921 to align
# Constraint # added constraint: constraint((T0356)P55.CB, (T0356)C64.CB) [> 4.1808 = 6.9679 < 9.0583] w=0.1921 to align
# Constraint # added constraint: constraint((T0356)N432.CB, (T0356)G446.CA) [> 3.6388 = 6.0647 < 7.8841] w=0.1919 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)F244.CB) [> 3.4160 = 5.6933 < 7.4012] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)Y242.CB) [> 4.7998 = 7.9997 < 10.3996] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)S218.CB, (T0356)G230.CA) [> 3.0092 = 5.0153 < 6.5200] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)E213.CB, (T0356)L248.CB) [> 4.2041 = 7.0069 < 9.1089] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)L229.CB) [> 3.8958 = 6.4929 < 8.4408] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)I228.CB) [> 4.5395 = 7.5658 < 9.8355] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)P225.CB) [> 3.4039 = 5.6732 < 7.3752] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)R197.CB, (T0356)P225.CB) [> 3.8283 = 6.3806 < 8.2947] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)R420.CB, (T0356)D474.CB) [> 4.3106 = 7.1843 < 9.3396] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)L229.CB) [> 3.8719 = 6.4532 < 8.3892] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)G230.CA) [> 2.5805 = 4.3008 < 5.5910] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)Y242.CB) [> 4.3208 = 7.2014 < 9.3618] w=0.1918 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)S218.CB) [> 3.2041 = 5.3402 < 6.9423] w=0.1912 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)L221.CB) [> 4.1223 = 6.8706 < 8.9317] w=0.1912 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)L221.CB) [> 4.3505 = 7.2509 < 9.4261] w=0.1912 to align
# Constraint # added constraint: constraint((T0356)T166.CB, (T0356)L221.CB) [> 2.5966 = 4.3277 < 5.6260] w=0.1912 to align
# Constraint # added constraint: constraint((T0356)T166.CB, (T0356)A223.CB) [> 2.9122 = 4.8537 < 6.3098] w=0.1912 to align
# Constraint # added constraint: constraint((T0356)I435.CB, (T0356)D454.CB) [> 4.0995 = 6.8324 < 8.8821] w=0.1912 to align
# Constraint # added constraint: constraint((T0356)L189.CB, (T0356)F304.CB) [> 3.1290 = 5.2150 < 6.7794] w=0.1909 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)I190.CB) [> 3.9746 = 6.6244 < 8.6117] w=0.1905 to align
# Constraint # added constraint: constraint((T0356)L92.CB, (T0356)T164.CB) [> 4.4267 = 7.3778 < 9.5912] w=0.1905 to align
# Constraint # added constraint: constraint((T0356)Y295.CB, (T0356)F304.CB) [> 3.4163 = 5.6938 < 7.4019] w=0.1900 to align
# Constraint # added constraint: constraint((T0356)S240.CB, (T0356)N432.CB) [> 3.6562 = 6.0936 < 7.9217] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L239.CB, (T0356)C401.CB) [> 3.7501 = 6.2501 < 8.1251] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L239.CB, (T0356)T369.CB) [> 3.1913 = 5.3188 < 6.9144] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L239.CB, (T0356)V368.CB) [> 3.9113 = 6.5189 < 8.4745] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L239.CB, (T0356)P325.CB) [> 4.7546 = 7.9243 < 10.3017] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)D237.CB, (T0356)P325.CB) [> 3.5830 = 5.9717 < 7.7632] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)T320.CB) [> 4.5685 = 7.6142 < 9.8985] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)F244.CB, (T0356)Y355.CB) [> 4.6055 = 7.6759 < 9.9787] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)F244.CB, (T0356)I399.CB) [> 3.8054 = 6.3424 < 8.2451] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)F244.CB, (T0356)C401.CB) [> 3.7791 = 6.2985 < 8.1880] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)F244.CB, (T0356)V430.CB) [> 3.9182 = 6.5303 < 8.4895] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L247.CB, (T0356)V430.CB) [> 4.7315 = 7.8858 < 10.2515] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L247.CB, (T0356)N432.CB) [> 2.7713 = 4.6188 < 6.0044] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)V306.CB) [> 4.6246 = 7.7077 < 10.0200] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)T320.CB) [> 4.6347 = 7.7245 < 10.0419] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)Y321.CB) [> 3.4827 = 5.8044 < 7.5457] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)I351.CB) [> 3.5918 = 5.9864 < 7.7823] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)T320.CB) [> 2.9562 = 4.9270 < 6.4051] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)Y321.CB) [> 3.6606 = 6.1011 < 7.9314] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)G323.CA) [> 4.1542 = 6.9237 < 9.0008] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)D237.CB) [> 4.5407 = 7.5678 < 9.8382] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)V368.CB) [> 4.2090 = 7.0151 < 9.1196] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)A378.CB) [> 4.3819 = 7.3031 < 9.4941] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)K396.CB) [> 3.2433 = 5.4054 < 7.0271] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)F397.CB) [> 4.4310 = 7.3849 < 9.6004] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)V398.CB) [> 3.1805 = 5.3008 < 6.8910] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)I399.CB) [> 4.1824 = 6.9706 < 9.0618] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)I417.CB) [> 3.4840 = 5.8067 < 7.5487] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)I370.CB, (T0356)W410.CB) [> 4.3808 = 7.3014 < 9.4918] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)K371.CB, (T0356)V405.CB) [> 3.7869 = 6.3115 < 8.2049] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)Y374.CB, (T0356)I417.CB) [> 3.2733 = 5.4554 < 7.0921] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)K396.CB) [> 4.0210 = 6.7017 < 8.7122] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)K396.CB) [> 3.2090 = 5.3483 < 6.9528] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)F397.CB, (T0356)I484.CB) [> 3.5538 = 5.9230 < 7.6999] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)I414.CB, (T0356)T427.CB) [> 3.9288 = 6.5480 < 8.5124] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)I414.CB, (T0356)L429.CB) [> 3.6551 = 6.0918 < 7.9194] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)R249.CB, (T0356)H318.CB) [> 4.7205 = 7.8676 < 10.2278] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)Y394.CB) [> 4.0768 = 6.7948 < 8.8332] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)Y394.CB) [> 4.2677 = 7.1129 < 9.2468] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)V385.CB) [> 4.2550 = 7.0917 < 9.2192] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)M382.CB) [> 3.6397 = 6.0661 < 7.8860] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)V368.CB) [> 4.0380 = 6.7301 < 8.7491] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)V398.CB) [> 4.6893 = 7.8155 < 10.1602] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)F397.CB) [> 2.9508 = 4.9180 < 6.3934] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)K396.CB) [> 4.4518 = 7.4197 < 9.6456] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)K396.CB) [> 3.0809 = 5.1348 < 6.6753] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)T395.CB) [> 4.4702 = 7.4503 < 9.6854] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)Y394.CB) [> 3.4093 = 5.6822 < 7.3868] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)K396.CB) [> 3.9604 = 6.6006 < 8.5808] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)T395.CB) [> 2.7306 = 4.5511 < 5.9164] w=0.1892 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)T433.CB) [> 3.7433 = 6.2388 < 8.1104] w=0.1878 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)Y437.CB) [> 3.1156 = 5.1927 < 6.7505] w=0.1878 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)L438.CB) [> 3.9881 = 6.6468 < 8.6408] w=0.1878 to align
# Constraint # added constraint: constraint((T0356)A416.CB, (T0356)T433.CB) [> 4.3232 = 7.2054 < 9.3670] w=0.1878 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)T433.CB) [> 3.5792 = 5.9654 < 7.7550] w=0.1878 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)Y437.CB) [> 3.3955 = 5.6592 < 7.3569] w=0.1878 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)D454.CB) [> 4.2972 = 7.1620 < 9.3106] w=0.1860 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)I399.CB) [> 3.6338 = 6.0563 < 7.8732] w=0.1856 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)P121.CB) [> 3.0199 = 5.0332 < 6.5432] w=0.1855 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)C401.CB) [> 3.2658 = 5.4430 < 7.0759] w=0.1848 to align
# Constraint # added constraint: constraint((T0356)G89.CA, (T0356)T122.CB) [> 3.7000 = 6.1666 < 8.0167] w=0.1846 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)L248.CB) [> 4.0989 = 6.8315 < 8.8809] w=0.1838 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)L453.CB) [> 4.4062 = 7.3436 < 9.5467] w=0.1829 to align
# Constraint # added constraint: constraint((T0356)F12.CB, (T0356)L92.CB) [> 4.2720 = 7.1200 < 9.2559] w=0.1791 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)Y295.CB) [> 3.1836 = 5.3059 < 6.8977] w=0.1779 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)G293.CA) [> 3.4479 = 5.7464 < 7.4704] w=0.1779 to align
# Constraint # added constraint: constraint((T0356)K396.CB, (T0356)G452.CA) [> 4.7116 = 7.8527 < 10.2086] w=0.1772 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)P443.CB) [> 4.0174 = 6.6957 < 8.7044] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)R214.CB, (T0356)G250.CA) [> 3.1769 = 5.2948 < 6.8833] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)R214.CB, (T0356)T251.CB) [> 3.8976 = 6.4960 < 8.4448] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)A267.CB) [> 4.6590 = 7.7649 < 10.0944] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)D353.CB) [> 4.3489 = 7.2482 < 9.4227] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)A267.CB) [> 3.2679 = 5.4465 < 7.0805] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)Y355.CB) [> 4.3591 = 7.2651 < 9.4446] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)K257.CB) [> 3.2307 = 5.3845 < 6.9998] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)C258.CB) [> 4.7270 = 7.8784 < 10.2419] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)L263.CB) [> 4.5837 = 7.6395 < 9.9314] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)A267.CB) [> 3.5133 = 5.8554 < 7.6121] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)D224.CB, (T0356)V265.CB) [> 4.6514 = 7.7524 < 10.0781] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)D224.CB, (T0356)L356.CB) [> 3.4907 = 5.8178 < 7.5632] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)P225.CB, (T0356)G360.CA) [> 3.0036 = 5.0060 < 6.5079] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)V29.CB, (T0356)I190.CB) [> 3.9413 = 6.5688 < 8.5394] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)V29.CB, (T0356)M191.CB) [> 4.6776 = 7.7961 < 10.1349] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)P31.CB, (T0356)E87.CB) [> 2.4291 = 4.0485 < 5.2631] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)H32.CB, (T0356)E87.CB) [> 4.3675 = 7.2792 < 9.4630] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)I35.CB, (T0356)E87.CB) [> 2.5663 = 4.2773 < 5.5604] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)I35.CB, (T0356)V88.CB) [> 3.9306 = 6.5510 < 8.5162] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)I35.CB, (T0356)G89.CA) [> 4.7137 = 7.8562 < 10.2131] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)I35.CB, (T0356)L91.CB) [> 2.4500 = 4.0833 < 5.3083] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A39.CB, (T0356)F94.CB) [> 4.6812 = 7.8021 < 10.1427] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)E431.CB) [> 3.7901 = 6.3168 < 8.2119] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)I435.CB) [> 3.3105 = 5.5175 < 7.1727] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)G384.CA, (T0356)T427.CB) [> 4.4004 = 7.3340 < 9.5341] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)L429.CB) [> 4.0486 = 6.7477 < 8.7720] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)Y437.CB) [> 4.6855 = 7.8092 < 10.1519] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)L389.CB, (T0356)T427.CB) [> 3.9214 = 6.5357 < 8.4964] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)K396.CB, (T0356)T427.CB) [> 4.4403 = 7.4005 < 9.6207] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)P423.CB) [> 4.7542 = 7.9237 < 10.3008] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)R425.CB) [> 2.6427 = 4.4046 < 5.7259] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)V405.CB, (T0356)L429.CB) [> 4.0461 = 6.7434 < 8.7664] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)V405.CB, (T0356)V430.CB) [> 3.7414 = 6.2357 < 8.1064] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)V405.CB, (T0356)E431.CB) [> 3.1691 = 5.2818 < 6.8663] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)I414.CB, (T0356)D436.CB) [> 3.3672 = 5.6120 < 7.2956] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)T418.CB, (T0356)L438.CB) [> 4.4285 = 7.3808 < 9.5950] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A424.CB, (T0356)L438.CB) [> 4.5667 = 7.6112 < 9.8945] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)R425.CB, (T0356)L438.CB) [> 3.5250 = 5.8751 < 7.6376] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)D426.CB, (T0356)L438.CB) [> 4.0910 = 6.8183 < 8.8638] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)T427.CB, (T0356)D436.CB) [> 4.5136 = 7.5227 < 9.7795] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)V428.CB, (T0356)S442.CB) [> 4.7967 = 7.9945 < 10.3928] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A226.CB, (T0356)P357.CB) [> 3.4043 = 5.6738 < 7.3759] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)A226.CB, (T0356)G360.CA) [> 3.1205 = 5.2008 < 6.7610] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)H377.CB, (T0356)I435.CB) [> 3.1713 = 5.2855 < 6.8712] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)H377.CB, (T0356)E431.CB) [> 4.1993 = 6.9989 < 9.0986] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)H377.CB, (T0356)V430.CB) [> 4.3239 = 7.2065 < 9.3685] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)H377.CB) [> 3.7208 = 6.2013 < 8.0617] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)S362.CB, (T0356)P434.CB) [> 3.5389 = 5.8981 < 7.6676] w=0.1770 to align
# Constraint # added constraint: constraint((T0356)P434.CB, (T0356)P470.CB) [> 3.3378 = 5.5630 < 7.2319] w=0.1763 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)L194.CB) [> 4.0881 = 6.8136 < 8.8576] w=0.1719 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)T164.CB) [> 4.1127 = 6.8544 < 8.9108] w=0.1716 to align
# Constraint # added constraint: constraint((T0356)K396.CB, (T0356)S449.CB) [> 4.4969 = 7.4948 < 9.7433] w=0.1683 to align
# Constraint # added constraint: constraint((T0356)M393.CB, (T0356)S449.CB) [> 4.0072 = 6.6786 < 8.6822] w=0.1683 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)W206.CB) [> 3.3700 = 5.6167 < 7.3017] w=0.1677 to align
# Constraint # added constraint: constraint((T0356)W410.CB, (T0356)A441.CB) [> 4.5765 = 7.6275 < 9.9158] w=0.1673 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)V428.CB) [> 4.0937 = 6.8229 < 8.8698] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)P70.CB) [> 4.6824 = 7.8039 < 10.1451] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)L453.CB) [> 4.3591 = 7.2652 < 9.4447] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)G452.CA) [> 3.0954 = 5.1590 < 6.7067] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)M451.CB) [> 4.5977 = 7.6628 < 9.9616] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)S449.CB) [> 2.4324 = 4.0540 < 5.2702] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)G448.CA) [> 4.6484 = 7.7473 < 10.0715] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)V430.CB) [> 4.4101 = 7.3502 < 9.5553] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)L429.CB) [> 3.0688 = 5.1147 < 6.6491] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)V428.CB) [> 4.7499 = 7.9165 < 10.2915] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)L453.CB) [> 3.5750 = 5.9584 < 7.7459] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)G452.CA) [> 3.3081 = 5.5136 < 7.1676] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)M451.CB) [> 2.9128 = 4.8547 < 6.3110] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)K450.CB) [> 4.1556 = 6.9259 < 9.0037] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)S449.CB) [> 3.6733 = 6.1222 < 7.9588] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)L429.CB) [> 4.3525 = 7.2541 < 9.4304] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)V428.CB) [> 3.0354 = 5.0589 < 6.5766] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)T427.CB) [> 4.4136 = 7.3560 < 9.5628] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)M451.CB) [> 4.5302 = 7.5503 < 9.8154] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)Y58.CB, (T0356)N457.CB) [> 3.2317 = 5.3861 < 7.0019] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)Y58.CB, (T0356)A455.CB) [> 2.6498 = 4.4164 < 5.7413] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)G57.CA, (T0356)N457.CB) [> 4.4175 = 7.3625 < 9.5712] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)P55.CB, (T0356)N457.CB) [> 4.5555 = 7.5926 < 9.8703] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)P55.CB, (T0356)T456.CB) [> 4.4563 = 7.4273 < 9.6554] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)N54.CB, (T0356)T456.CB) [> 3.4217 = 5.7029 < 7.4137] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)N54.CB, (T0356)A455.CB) [> 2.1861 = 3.6435 < 4.7366] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)N54.CB, (T0356)D454.CB) [> 3.3540 = 5.5901 < 7.2671] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)E53.CB, (T0356)A455.CB) [> 4.2158 = 7.0262 < 9.1341] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)E53.CB, (T0356)D454.CB) [> 3.3990 = 5.6650 < 7.3645] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)E53.CB, (T0356)L453.CB) [> 4.2803 = 7.1338 < 9.2740] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)E53.CB, (T0356)G452.CA) [> 3.8113 = 6.3521 < 8.2578] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)E53.CB, (T0356)V430.CB) [> 4.7256 = 7.8760 < 10.2388] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)A455.CB) [> 3.6950 = 6.1583 < 8.0058] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)D454.CB) [> 4.6989 = 7.8316 < 10.1811] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)L453.CB) [> 2.6334 = 4.3890 < 5.7057] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)G452.CA) [> 4.1445 = 6.9074 < 8.9797] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)V430.CB) [> 2.9701 = 4.9503 < 6.4353] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)L429.CB) [> 4.3906 = 7.3176 < 9.5129] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)A45.CB, (T0356)M451.CB) [> 4.0203 = 6.7006 < 8.7108] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)V29.CB, (T0356)L453.CB) [> 4.4483 = 7.4138 < 9.6380] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)V29.CB, (T0356)G47.CA) [> 3.4879 = 5.8132 < 7.5571] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)P28.CB, (T0356)G468.CA) [> 4.3854 = 7.3089 < 9.5016] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L27.CB, (T0356)L453.CB) [> 3.5773 = 5.9622 < 7.7509] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L27.CB, (T0356)T69.CB) [> 4.2987 = 7.1645 < 9.3139] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)I25.CB, (T0356)R465.CB) [> 4.6517 = 7.7528 < 10.0787] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)K450.CB) [> 2.9701 = 4.9501 < 6.4352] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)L429.CB) [> 4.5216 = 7.5361 < 9.7969] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)T427.CB) [> 3.0292 = 5.0486 < 6.5631] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)D426.CB) [> 4.6810 = 7.8017 < 10.1423] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)T418.CB) [> 3.6974 = 6.1623 < 8.0110] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)I417.CB) [> 3.4952 = 5.8253 < 7.5730] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)P48.CB, (T0356)K450.CB) [> 3.5581 = 5.9302 < 7.7093] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)P48.CB, (T0356)T427.CB) [> 4.4251 = 7.3751 < 9.5876] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)P48.CB, (T0356)D426.CB) [> 3.4818 = 5.8030 < 7.5439] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)P48.CB, (T0356)R425.CB) [> 4.7300 = 7.8834 < 10.2484] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)P48.CB, (T0356)P423.CB) [> 3.8274 = 6.3790 < 8.2927] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)G47.CA, (T0356)K450.CB) [> 2.5487 = 4.2477 < 5.5221] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)S449.CB, (T0356)I471.CB) [> 3.0728 = 5.1214 < 6.6578] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)Y394.CB, (T0356)R425.CB) [> 3.6957 = 6.1596 < 8.0074] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)M383.CB, (T0356)C401.CB) [> 3.7580 = 6.2633 < 8.1423] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)T456.CB, (T0356)W467.CB) [> 4.4485 = 7.4142 < 9.6384] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)T456.CB, (T0356)R465.CB) [> 2.8438 = 4.7396 < 6.1614] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)A455.CB, (T0356)R465.CB) [> 4.2043 = 7.0072 < 9.1093] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)D454.CB, (T0356)R469.CB) [> 4.0179 = 6.6966 < 8.7055] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)G452.CA, (T0356)I471.CB) [> 3.6933 = 6.1555 < 8.0021] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)G452.CA, (T0356)P470.CB) [> 4.5000 = 7.5000 < 9.7500] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)G78.CA, (T0356)Y203.CB) [> 3.8824 = 6.4707 < 8.4119] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)G78.CA, (T0356)M191.CB) [> 3.5370 = 5.8950 < 7.6635] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)G76.CA, (T0356)M191.CB) [> 2.5613 = 4.2688 < 5.5494] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)G76.CA, (T0356)I190.CB) [> 4.6512 = 7.7520 < 10.0776] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)G76.CA, (T0356)L189.CB) [> 3.6291 = 6.0485 < 7.8630] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)M75.CB, (T0356)F104.CB) [> 3.8583 = 6.4306 < 8.3597] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)V73.CB, (T0356)V428.CB) [> 4.4940 = 7.4900 < 9.7370] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)P70.CB, (T0356)V430.CB) [> 3.8841 = 6.4734 < 8.4155] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)P70.CB, (T0356)V428.CB) [> 4.7400 = 7.9001 < 10.2701] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)T69.CB, (T0356)L453.CB) [> 4.4975 = 7.4958 < 9.7445] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)L189.CB, (T0356)Y203.CB) [> 4.5523 = 7.5872 < 9.8633] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)I190.CB) [> 4.0765 = 6.7942 < 8.8325] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)G177.CA, (T0356)R192.CB) [> 3.2113 = 5.3521 < 6.9578] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)F104.CB, (T0356)W193.CB) [> 3.3715 = 5.6192 < 7.3050] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)F104.CB, (T0356)M120.CB) [> 3.2712 = 5.4521 < 7.0877] w=0.1664 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)Y321.CB) [> 4.7828 = 7.9713 < 10.3627] w=0.1657 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)W459.CB) [> 4.2315 = 7.0526 < 9.1683] w=0.1639 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)W459.CB) [> 3.7059 = 6.1764 < 8.0294] w=0.1639 to align
# Constraint # added constraint: constraint((T0356)F108.CB, (T0356)P357.CB) [> 4.7601 = 7.9335 < 10.3135] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)F104.CB, (T0356)P358.CB) [> 4.6171 = 7.6951 < 10.0037] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)T122.CB, (T0356)T164.CB) [> 3.2499 = 5.4166 < 7.0415] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)L118.CB, (T0356)D353.CB) [> 4.5225 = 7.5375 < 9.7988] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)E87.CB, (T0356)F114.CB) [> 3.4747 = 5.7912 < 7.5286] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)L91.CB, (T0356)V331.CB) [> 2.3451 = 3.9084 < 5.0809] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)L92.CB, (T0356)V331.CB) [> 2.9046 = 4.8410 < 6.2933] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)P98.CB, (T0356)L107.CB) [> 4.4000 = 7.3333 < 9.5332] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)H377.CB) [> 2.2676 = 3.7793 < 4.9131] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)V400.CB) [> 4.6922 = 7.8203 < 10.1664] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)Y394.CB) [> 4.5554 = 7.5923 < 9.8700] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)T395.CB) [> 3.6603 = 6.1004 < 7.9306] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)M451.CB, (T0356)D482.CB) [> 3.8709 = 6.4516 < 8.3870] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)E431.CB, (T0356)A441.CB) [> 1.4638 = 2.4397 < 3.1716] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)E431.CB, (T0356)F440.CB) [> 4.0001 = 6.6669 < 8.6670] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)V430.CB, (T0356)A441.CB) [> 4.1609 = 6.9348 < 9.0152] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)L429.CB, (T0356)A441.CB) [> 3.4491 = 5.7484 < 7.4730] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)T122.CB, (T0356)V165.CB) [> 4.2216 = 7.0361 < 9.1469] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)R124.CB, (T0356)L163.CB) [> 3.8100 = 6.3500 < 8.2550] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)L125.CB, (T0356)L163.CB) [> 3.6106 = 6.0177 < 7.8230] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)L125.CB, (T0356)P357.CB) [> 4.1380 = 6.8967 < 8.9658] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)L125.CB, (T0356)H377.CB) [> 3.8501 = 6.4169 < 8.3419] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)F354.CB) [> 3.3964 = 5.6607 < 7.3589] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)D353.CB) [> 3.2278 = 5.3797 < 6.9936] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)F354.CB) [> 4.2842 = 7.1403 < 9.2824] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)V352.CB) [> 3.2748 = 5.4580 < 7.0954] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)G333.CA, (T0356)T427.CB) [> 4.6251 = 7.7085 < 10.0211] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)Y179.CB, (T0356)L194.CB) [> 3.2428 = 5.4047 < 7.0261] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)G168.CA, (T0356)I351.CB) [> 4.3797 = 7.2994 < 9.4893] w=0.1631 to align
# Constraint # added constraint: constraint((T0356)L429.CB, (T0356)L438.CB) [> 4.0173 = 6.6955 < 8.7042] w=0.1621 to align
# Constraint # added constraint: constraint((T0356)V265.CB, (T0356)G293.CA) [> 3.5504 = 5.9173 < 7.6925] w=0.1613 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)L365.CB) [> 3.9253 = 6.5422 < 8.5049] w=0.1603 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)L365.CB) [> 4.3336 = 7.2227 < 9.3895] w=0.1603 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)A366.CB) [> 3.2584 = 5.4306 < 7.0598] w=0.1603 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)Y363.CB) [> 3.5753 = 5.9589 < 7.7465] w=0.1603 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)H377.CB) [> 4.3781 = 7.2969 < 9.4860] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)Q373.CB, (T0356)N411.CB) [> 3.3272 = 5.5452 < 7.2088] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)I417.CB) [> 4.7242 = 7.8736 < 10.2357] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)M393.CB, (T0356)G448.CA) [> 2.8470 = 4.7450 < 6.1686] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)D314.CB) [> 3.6153 = 6.0255 < 7.8332] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)Y242.CB) [> 4.0472 = 6.7454 < 8.7690] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)V352.CB) [> 4.7880 = 7.9799 < 10.3739] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)D262.CB, (T0356)Q279.CB) [> 3.1987 = 5.3312 < 6.9306] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)L263.CB, (T0356)Q279.CB) [> 4.4624 = 7.4374 < 9.6686] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)L263.CB, (T0356)G280.CA) [> 3.9056 = 6.5093 < 8.4621] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)M451.CB) [> 2.4509 = 4.0848 < 5.3102] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)T418.CB, (T0356)L488.CB) [> 3.7304 = 6.2173 < 8.0825] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)L447.CB, (T0356)L488.CB) [> 3.9544 = 6.5906 < 8.5678] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)W415.CB, (T0356)I484.CB) [> 3.9318 = 6.5530 < 8.5189] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)I414.CB, (T0356)G452.CA) [> 4.7192 = 7.8654 < 10.2250] w=0.1595 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)T164.CB) [> 2.4777 = 4.1295 < 5.3684] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)L163.CB) [> 4.0311 = 6.7185 < 8.7340] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)V73.CB) [> 3.9676 = 6.6126 < 8.5964] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)L163.CB) [> 3.0610 = 5.1016 < 6.6321] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)G162.CA) [> 3.9456 = 6.5760 < 8.5488] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)T164.CB) [> 3.6185 = 6.0308 < 7.8400] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)G162.CA) [> 2.9384 = 4.8973 < 6.3665] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)W161.CB) [> 3.7159 = 6.1932 < 8.0512] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)G162.CA) [> 4.3998 = 7.3330 < 9.5329] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)W161.CB) [> 3.6556 = 6.0928 < 7.9206] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)M60.CB, (T0356)W161.CB) [> 3.2916 = 5.4860 < 7.1318] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)N54.CB, (T0356)C64.CB) [> 4.4860 = 7.4766 < 9.7196] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)E53.CB, (T0356)N65.CB) [> 4.0447 = 6.7411 < 8.7635] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)E53.CB, (T0356)C64.CB) [> 3.5868 = 5.9779 < 7.7713] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)N65.CB) [> 4.0100 = 6.6832 < 8.6882] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)A226.CB, (T0356)E241.CB) [> 3.6078 = 6.0130 < 7.8169] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)V88.CB, (T0356)I159.CB) [> 3.9620 = 6.6033 < 8.5843] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)A74.CB, (T0356)I159.CB) [> 2.9167 = 4.8611 < 6.3195] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)T69.CB, (T0356)G168.CA) [> 3.8671 = 6.4452 < 8.3788] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)T69.CB, (T0356)R167.CB) [> 3.7477 = 6.2461 < 8.1200] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)G168.CA) [> 4.3885 = 7.3141 < 9.5084] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)R167.CB) [> 4.0710 = 6.7849 < 8.8204] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)T166.CB) [> 3.6642 = 6.1070 < 7.9391] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)V165.CB) [> 3.6398 = 6.0664 < 7.8863] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)V165.CB) [> 4.1639 = 6.9398 < 9.0217] w=0.1590 to align
# Constraint # added constraint: constraint((T0356)L9.CB, (T0356)M120.CB) [> 4.0876 = 6.8127 < 8.8565] w=0.1580 to align
# Constraint # added constraint: constraint((T0356)F397.CB, (T0356)I417.CB) [> 3.7602 = 6.2670 < 8.1470] w=0.1564 to align
# Constraint # added constraint: constraint((T0356)F397.CB, (T0356)M451.CB) [> 3.7274 = 6.2124 < 8.0761] w=0.1564 to align
# Constraint # added constraint: constraint((T0356)F244.CB, (T0356)V256.CB) [> 2.4739 = 4.1232 < 5.3602] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)F244.CB, (T0356)K257.CB) [> 4.7359 = 7.8932 < 10.2611] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)F244.CB, (T0356)C258.CB) [> 2.9186 = 4.8643 < 6.3236] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)P236.CB, (T0356)E328.CB) [> 4.1102 = 6.8503 < 8.9054] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)P236.CB, (T0356)H291.CB) [> 4.4290 = 7.3817 < 9.5962] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)V235.CB, (T0356)A330.CB) [> 4.3046 = 7.1744 < 9.3267] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)V235.CB, (T0356)H291.CB) [> 2.4803 = 4.1338 < 5.3740] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)V235.CB, (T0356)D290.CB) [> 4.4526 = 7.4209 < 9.6472] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)P234.CB, (T0356)A330.CB) [> 3.3744 = 5.6241 < 7.3113] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)P234.CB, (T0356)H291.CB) [> 4.6674 = 7.7791 < 10.1128] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)T233.CB, (T0356)V331.CB) [> 4.7218 = 7.8696 < 10.2305] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)T233.CB, (T0356)A330.CB) [> 2.4135 = 4.0226 < 5.2293] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)D290.CB) [> 4.4128 = 7.3548 < 9.5612] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)K257.CB, (T0356)V303.CB) [> 3.6892 = 6.1487 < 7.9933] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)K257.CB, (T0356)V298.CB) [> 3.5724 = 5.9540 < 7.7402] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)K257.CB, (T0356)Y295.CB) [> 3.9110 = 6.5183 < 8.4738] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)V298.CB) [> 4.1223 = 6.8706 < 8.9317] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)L247.CB, (T0356)V256.CB) [> 3.4345 = 5.7242 < 7.4415] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)G246.CA, (T0356)V256.CB) [> 4.0613 = 6.7689 < 8.7996] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)T233.CB, (T0356)H291.CB) [> 4.2394 = 7.0656 < 9.1853] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)T233.CB, (T0356)D290.CB) [> 2.9886 = 4.9810 < 6.4753] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)T233.CB, (T0356)I259.CB) [> 4.2182 = 7.0303 < 9.1393] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)I259.CB) [> 4.0369 = 6.7282 < 8.7466] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)L365.CB) [> 4.6106 = 7.6844 < 9.9897] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)A366.CB) [> 3.5551 = 5.9252 < 7.7028] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)L365.CB) [> 4.2991 = 7.1652 < 9.3147] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)R364.CB) [> 3.5482 = 5.9137 < 7.6878] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)Y317.CB) [> 4.0759 = 6.7932 < 8.8312] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)L365.CB) [> 4.0733 = 6.7889 < 8.8255] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)L356.CB) [> 4.6504 = 7.7506 < 10.0758] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)P302.CB, (T0356)H318.CB) [> 4.0495 = 6.7491 < 8.7738] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)L356.CB) [> 4.7330 = 7.8884 < 10.2549] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)L356.CB) [> 3.6014 = 6.0023 < 7.8030] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)D314.CB, (T0356)H377.CB) [> 3.9537 = 6.5895 < 8.5663] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)L356.CB) [> 3.7831 = 6.3052 < 8.1968] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)H291.CB, (T0356)A330.CB) [> 4.2203 = 7.0338 < 9.1439] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)D290.CB, (T0356)A330.CB) [> 2.5234 = 4.2057 < 5.4675] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)G293.CA) [> 2.6405 = 4.4009 < 5.7212] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)T292.CB) [> 4.7431 = 7.9051 < 10.2767] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)H291.CB) [> 4.7769 = 7.9615 < 10.3500] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)D290.CB) [> 3.4036 = 5.6726 < 7.3744] w=0.1531 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)L125.CB) [> 3.1042 = 5.1737 < 6.7258] w=0.1524 to align
# Constraint # added constraint: constraint((T0356)C130.CB, (T0356)P225.CB) [> 3.9661 = 6.6101 < 8.5932] w=0.1524 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)P287.CB) [> 3.8088 = 6.3481 < 8.2525] w=0.1524 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)Y321.CB) [> 3.2935 = 5.4891 < 7.1358] w=0.1524 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)T322.CB) [> 3.0219 = 5.0365 < 6.5474] w=0.1524 to align
# Constraint # added constraint: constraint((T0356)H291.CB, (T0356)R324.CB) [> 4.5488 = 7.5814 < 9.8558] w=0.1524 to align
# Constraint # added constraint: constraint((T0356)T292.CB, (T0356)R324.CB) [> 3.7125 = 6.1875 < 8.0437] w=0.1524 to align
# Constraint # added constraint: constraint((T0356)G293.CA, (T0356)P325.CB) [> 4.2938 = 7.1564 < 9.3033] w=0.1524 to align
# Constraint # added constraint: constraint((T0356)L263.CB, (T0356)R312.CB) [> 3.2783 = 5.4638 < 7.1030] w=0.1500 to align
# Constraint # added constraint: constraint((T0356)E264.CB, (T0356)T310.CB) [> 3.6395 = 6.0657 < 7.8855] w=0.1500 to align
# Constraint # added constraint: constraint((T0356)E264.CB, (T0356)Q311.CB) [> 2.7572 = 4.5954 < 5.9740] w=0.1500 to align
# Constraint # added constraint: constraint((T0356)R192.CB, (T0356)Y355.CB) [> 2.6254 = 4.3756 < 5.6883] w=0.1491 to align
# Constraint # added constraint: constraint((T0356)R192.CB, (T0356)F354.CB) [> 4.3115 = 7.1858 < 9.3415] w=0.1491 to align
# Constraint # added constraint: constraint((T0356)R192.CB, (T0356)D353.CB) [> 4.4588 = 7.4313 < 9.6608] w=0.1491 to align
# Constraint # added constraint: constraint((T0356)L16.CB, (T0356)K133.CB) [> 4.7970 = 7.9950 < 10.3935] w=0.1491 to align
# Constraint # added constraint: constraint((T0356)L15.CB, (T0356)G76.CA) [> 4.5859 = 7.6432 < 9.9361] w=0.1491 to align
# Constraint # added constraint: constraint((T0356)F12.CB, (T0356)V88.CB) [> 3.8227 = 6.3712 < 8.2825] w=0.1491 to align
# Constraint # added constraint: constraint((T0356)F12.CB, (T0356)M77.CB) [> 3.9605 = 6.6008 < 8.5811] w=0.1491 to align
# Constraint # added constraint: constraint((T0356)S195.CB, (T0356)V352.CB) [> 4.0443 = 6.7406 < 8.7627] w=0.1491 to align
# Constraint # added constraint: constraint((T0356)T42.CB, (T0356)M60.CB) [> 3.0081 = 5.0135 < 6.5175] w=0.1471 to align
# Constraint # added constraint: constraint((T0356)E21.CB, (T0356)R72.CB) [> 3.7304 = 6.2173 < 8.0825] w=0.1452 to align
# Constraint # added constraint: constraint((T0356)L22.CB, (T0356)V73.CB) [> 3.4447 = 5.7411 < 7.4634] w=0.1452 to align
# Constraint # added constraint: constraint((T0356)R24.CB, (T0356)L63.CB) [> 3.9775 = 6.6292 < 8.6180] w=0.1452 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)F397.CB) [> 3.9678 = 6.6130 < 8.5969] w=0.1442 to align
# Constraint # added constraint: constraint((T0356)R167.CB, (T0356)A223.CB) [> 3.7066 = 6.1777 < 8.0310] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)V219.CB) [> 4.5942 = 7.6569 < 9.9540] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)V256.CB) [> 4.6091 = 7.6818 < 9.9863] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)S218.CB) [> 3.2195 = 5.3658 < 6.9756] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)V217.CB) [> 3.1023 = 5.1705 < 6.7216] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)V256.CB) [> 3.8784 = 6.4640 < 8.4033] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)V256.CB) [> 4.4700 = 7.4501 < 9.6851] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)T160.CB, (T0356)C258.CB) [> 2.7355 = 4.5591 < 5.9269] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)T160.CB, (T0356)K257.CB) [> 3.5209 = 5.8681 < 7.6286] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)T160.CB, (T0356)V256.CB) [> 2.8582 = 4.7636 < 6.1927] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)I159.CB, (T0356)C258.CB) [> 3.2720 = 5.4533 < 7.0893] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)L158.CB, (T0356)I259.CB) [> 3.4979 = 5.8299 < 7.5788] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)L158.CB, (T0356)C258.CB) [> 3.3320 = 5.5534 < 7.2194] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)L263.CB, (T0356)Q311.CB) [> 4.2695 = 7.1158 < 9.2506] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)F244.CB) [> 3.7807 = 6.3011 < 8.1915] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)A226.CB, (T0356)A243.CB) [> 4.1904 = 6.9839 < 9.0791] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)A226.CB, (T0356)Y242.CB) [> 3.4794 = 5.7990 < 7.5388] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)P225.CB, (T0356)Y242.CB) [> 3.8519 = 6.4199 < 8.3459] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)A200.CB, (T0356)T227.CB) [> 4.4193 = 7.3654 < 9.5751] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)Q174.CB, (T0356)G185.CA) [> 2.7994 = 4.6657 < 6.0654] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)P169.CB, (T0356)T227.CB) [> 4.1125 = 6.8542 < 8.9104] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)P169.CB, (T0356)A223.CB) [> 4.2685 = 7.1142 < 9.2484] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)P169.CB, (T0356)G222.CA) [> 4.0863 = 6.8105 < 8.8537] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)I35.CB, (T0356)E53.CB) [> 4.0607 = 6.7678 < 8.7982] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)L33.CB, (T0356)M383.CB) [> 4.0807 = 6.8012 < 8.8416] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)L33.CB, (T0356)S268.CB) [> 4.2194 = 7.0323 < 9.1420] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)P31.CB, (T0356)S268.CB) [> 4.0781 = 6.7968 < 8.8358] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)V29.CB, (T0356)N54.CB) [> 4.1304 = 6.8840 < 8.9492] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)E17.CB, (T0356)G47.CA) [> 4.3525 = 7.2542 < 9.4304] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)A223.CB) [> 2.9823 = 4.9705 < 6.4617] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)G222.CA) [> 4.5958 = 7.6597 < 9.9576] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)N54.CB, (T0356)L66.CB) [> 3.3499 = 5.5832 < 7.2581] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)V219.CB) [> 4.7851 = 7.9752 < 10.3678] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)S59.CB) [> 4.6092 = 7.6820 < 9.9866] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)V430.CB) [> 4.3771 = 7.2951 < 9.4837] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)A407.CB, (T0356)E431.CB) [> 4.2464 = 7.0773 < 9.2005] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)A407.CB, (T0356)V430.CB) [> 4.5481 = 7.5801 < 9.8541] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)E431.CB) [> 3.3693 = 5.6155 < 7.3001] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)M383.CB, (T0356)R420.CB) [> 4.5428 = 7.5713 < 9.8427] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)A407.CB) [> 4.3797 = 7.2996 < 9.4895] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)E431.CB) [> 4.6190 = 7.6983 < 10.0078] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)A407.CB) [> 4.5990 = 7.6651 < 9.9646] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)E431.CB) [> 3.8017 = 6.3362 < 8.2370] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)V400.CB) [> 2.8584 = 4.7639 < 6.1931] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)I399.CB) [> 3.5873 = 5.9788 < 7.7724] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)V398.CB) [> 3.5102 = 5.8504 < 7.6055] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)I399.CB) [> 3.7081 = 6.1801 < 8.0341] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)V398.CB) [> 3.5691 = 5.9486 < 7.7332] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)Q391.CB) [> 3.3574 = 5.5957 < 7.2744] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)L429.CB) [> 3.8864 = 6.4773 < 8.4205] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)I399.CB) [> 3.7599 = 6.2664 < 8.1464] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)D436.CB, (T0356)N457.CB) [> 2.5626 = 4.2710 < 5.5523] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)I435.CB, (T0356)N457.CB) [> 3.0984 = 5.1639 < 6.7131] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)I435.CB, (T0356)A455.CB) [> 3.8459 = 6.4098 < 8.3328] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)P434.CB, (T0356)T456.CB) [> 3.2566 = 5.4277 < 7.0560] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)P434.CB, (T0356)D454.CB) [> 2.9618 = 4.9364 < 6.4173] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)V430.CB, (T0356)M451.CB) [> 3.0986 = 5.1644 < 6.7137] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)V398.CB) [> 3.6851 = 6.1419 < 7.9844] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)Q391.CB) [> 3.4471 = 5.7451 < 7.4686] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)L429.CB) [> 4.6519 = 7.7532 < 10.0791] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)V352.CB) [> 4.6157 = 7.6928 < 10.0006] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)V352.CB) [> 3.8319 = 6.3865 < 8.3025] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)D353.CB) [> 4.1561 = 6.9269 < 9.0050] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)F354.CB) [> 3.1842 = 5.3070 < 6.8991] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)Y355.CB) [> 3.4431 = 5.7385 < 7.4601] w=0.1411 to align
# Constraint # added constraint: constraint((T0356)A74.CB, (T0356)V88.CB) [> 3.3703 = 5.6172 < 7.3024] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)V73.CB, (T0356)E87.CB) [> 3.3908 = 5.6513 < 7.3466] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)R72.CB, (T0356)E87.CB) [> 3.9831 = 6.6385 < 8.6301] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)P61.CB) [> 3.8113 = 6.3522 < 8.2578] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)P61.CB) [> 4.1061 = 6.8435 < 8.8965] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)L66.CB) [> 3.9676 = 6.6127 < 8.5965] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)T160.CB, (T0356)R192.CB) [> 3.5550 = 5.9250 < 7.7025] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)T160.CB, (T0356)I190.CB) [> 3.8290 = 6.3817 < 8.2962] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)I159.CB, (T0356)M191.CB) [> 3.6723 = 6.1205 < 7.9566] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)L158.CB, (T0356)L194.CB) [> 3.9942 = 6.6570 < 8.6540] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)L158.CB, (T0356)W193.CB) [> 4.5921 = 7.6535 < 9.9495] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)P157.CB, (T0356)W193.CB) [> 3.3029 = 5.5049 < 7.1563] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)A156.CB, (T0356)S195.CB) [> 4.4419 = 7.4032 < 9.6241] w=0.1395 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)V82.CB) [> 2.9876 = 4.9793 < 6.4731] w=0.1386 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)V255.CB) [> 4.7264 = 7.8773 < 10.2405] w=0.1386 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)V256.CB) [> 4.0464 = 6.7440 < 8.7672] w=0.1386 to align
# Constraint # added constraint: constraint((T0356)D224.CB, (T0356)G323.CA) [> 3.9992 = 6.6653 < 8.6649] w=0.1386 to align
# Constraint # added constraint: constraint((T0356)G246.CA, (T0356)V255.CB) [> 3.6647 = 6.1079 < 7.9402] w=0.1386 to align
# Constraint # added constraint: constraint((T0356)Q182.CB, (T0356)V219.CB) [> 4.3712 = 7.2853 < 9.4709] w=0.1365 to align
# Constraint # added constraint: constraint((T0356)Q182.CB, (T0356)R192.CB) [> 4.6657 = 7.7762 < 10.1091] w=0.1365 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)F304.CB) [> 4.6907 = 7.8178 < 10.1632] w=0.1365 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)A245.CB) [> 2.6837 = 4.4728 < 5.8147] w=0.1365 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)S268.CB) [> 4.3502 = 7.2503 < 9.4253] w=0.1365 to align
# Constraint # added constraint: constraint((T0356)G275.CA, (T0356)F304.CB) [> 2.6362 = 4.3936 < 5.7117] w=0.1365 to align
# Constraint # added constraint: constraint((T0356)G275.CA, (T0356)T305.CB) [> 3.6438 = 6.0730 < 7.8949] w=0.1365 to align
# Constraint # added constraint: constraint((T0356)Y276.CB, (T0356)F304.CB) [> 3.3875 = 5.6459 < 7.3397] w=0.1365 to align
# Constraint # added constraint: constraint((T0356)Y276.CB, (T0356)T305.CB) [> 2.9162 = 4.8603 < 6.3184] w=0.1365 to align
# Constraint # added constraint: constraint((T0356)E278.CB, (T0356)F304.CB) [> 3.2593 = 5.4322 < 7.0618] w=0.1365 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)T122.CB) [> 3.5770 = 5.9616 < 7.7501] w=0.1345 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)T122.CB) [> 3.9987 = 6.6645 < 8.6638] w=0.1345 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)V219.CB) [> 4.5198 = 7.5329 < 9.7928] w=0.1345 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)L125.CB) [> 4.2927 = 7.1544 < 9.3008] w=0.1345 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)V219.CB) [> 3.6477 = 6.0795 < 7.9034] w=0.1345 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)L125.CB) [> 2.6349 = 4.3915 < 5.7089] w=0.1345 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)F354.CB) [> 3.7155 = 6.1925 < 8.0503] w=0.1345 to align
# Constraint # added constraint: constraint((T0356)P121.CB, (T0356)L176.CB) [> 4.0104 = 6.6841 < 8.6893] w=0.1342 to align
# Constraint # added constraint: constraint((T0356)D403.CB, (T0356)A455.CB) [> 3.4655 = 5.7759 < 7.5086] w=0.1329 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)A455.CB) [> 4.0089 = 6.6815 < 8.6859] w=0.1329 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)D454.CB) [> 4.3124 = 7.1874 < 9.3436] w=0.1329 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)R364.CB) [> 4.4911 = 7.4852 < 9.7308] w=0.1316 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)A455.CB) [> 4.1131 = 6.8552 < 8.9117] w=0.1298 to align
# Constraint # added constraint: constraint((T0356)T36.CB, (T0356)L85.CB) [> 3.2179 = 5.3632 < 6.9722] w=0.1294 to align
# Constraint # added constraint: constraint((T0356)V232.CB, (T0356)A245.CB) [> 3.6547 = 6.0911 < 7.9185] w=0.1294 to align
# Constraint # added constraint: constraint((T0356)V232.CB, (T0356)F244.CB) [> 3.5125 = 5.8542 < 7.6104] w=0.1294 to align
# Constraint # added constraint: constraint((T0356)V232.CB, (T0356)Y242.CB) [> 3.1705 = 5.2842 < 6.8695] w=0.1294 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)V232.CB) [> 2.7343 = 4.5571 < 5.9243] w=0.1294 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)L438.CB) [> 3.8980 = 6.4967 < 8.4457] w=0.1292 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)Y437.CB) [> 4.0265 = 6.7109 < 8.7241] w=0.1292 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)L438.CB) [> 2.9924 = 4.9873 < 6.4835] w=0.1292 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)F440.CB) [> 4.0042 = 6.6737 < 8.6758] w=0.1292 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)D290.CB) [> 4.7263 = 7.8772 < 10.2403] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)I351.CB) [> 4.6824 = 7.8040 < 10.1451] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)G289.CA) [> 3.0413 = 5.0688 < 6.5894] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)D290.CB) [> 3.7323 = 6.2205 < 8.0866] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)I228.CB, (T0356)G289.CA) [> 4.2028 = 7.0047 < 9.1061] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)G230.CA, (T0356)Y295.CB) [> 4.6161 = 7.6936 < 10.0016] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)H196.CB, (T0356)P225.CB) [> 3.1276 = 5.2127 < 6.7766] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)D290.CB, (T0356)L356.CB) [> 4.2269 = 7.0449 < 9.1584] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)D290.CB, (T0356)Y355.CB) [> 4.6905 = 7.8175 < 10.1628] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)I351.CB) [> 4.5349 = 7.5581 < 9.8256] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)A245.CB, (T0356)E285.CB) [> 2.9009 = 4.8349 < 6.2854] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)G246.CA, (T0356)T282.CB) [> 4.2169 = 7.0282 < 9.1366] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)G246.CA, (T0356)E285.CB) [> 2.2684 = 3.7807 < 4.9149] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)Y288.CB, (T0356)V385.CB) [> 4.0153 = 6.6921 < 8.6998] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)Y288.CB, (T0356)F388.CB) [> 3.5760 = 5.9600 < 7.7480] w=0.1279 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)V398.CB) [> 4.1822 = 6.9704 < 9.0615] w=0.1261 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)V398.CB) [> 3.3720 = 5.6201 < 7.3061] w=0.1261 to align
# Constraint # added constraint: constraint((T0356)F244.CB, (T0356)V367.CB) [> 3.4346 = 5.7243 < 7.4416] w=0.1261 to align
# Constraint # added constraint: constraint((T0356)P236.CB, (T0356)A378.CB) [> 4.0984 = 6.8306 < 8.8798] w=0.1261 to align
# Constraint # added constraint: constraint((T0356)P236.CB, (T0356)H377.CB) [> 3.7959 = 6.3264 < 8.2244] w=0.1261 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)V367.CB) [> 2.8916 = 4.8193 < 6.2651] w=0.1261 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)V367.CB) [> 4.2953 = 7.1589 < 9.3065] w=0.1261 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)V367.CB) [> 4.0714 = 6.7857 < 8.8214] w=0.1261 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)V430.CB) [> 4.6674 = 7.7790 < 10.1127] w=0.1261 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)M382.CB) [> 3.1789 = 5.2982 < 6.8876] w=0.1246 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)L356.CB) [> 4.2146 = 7.0243 < 9.1316] w=0.1237 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)L63.CB) [> 3.8435 = 6.4058 < 8.3275] w=0.1216 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)C64.CB) [> 3.4872 = 5.8120 < 7.5555] w=0.1216 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)T164.CB) [> 3.5922 = 5.9870 < 7.7831] w=0.1216 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)T164.CB) [> 3.8043 = 6.3405 < 8.2426] w=0.1216 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)V367.CB) [> 4.2846 = 7.1410 < 9.2833] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)K495.CB) [> 4.6254 = 7.7090 < 10.0217] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)V368.CB) [> 4.4063 = 7.3439 < 9.5471] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)L365.CB) [> 3.5555 = 5.9259 < 7.7036] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)V334.CB, (T0356)P460.CB) [> 4.4840 = 7.4732 < 9.7152] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)F491.CB) [> 3.3850 = 5.6417 < 7.3342] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)I490.CB) [> 3.9988 = 6.6647 < 8.6642] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)M383.CB, (T0356)A489.CB) [> 4.6057 = 7.6762 < 9.9790] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)T433.CB, (T0356)W467.CB) [> 3.1321 = 5.2202 < 6.7863] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)A335.CB, (T0356)D439.CB) [> 3.3388 = 5.5646 < 7.2340] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)V339.CB, (T0356)D439.CB) [> 3.9707 = 6.6178 < 8.6032] w=0.1210 to align
# Constraint # added constraint: constraint((T0356)R192.CB, (T0356)F304.CB) [> 4.2867 = 7.1444 < 9.2877] w=0.1179 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)K396.CB) [> 3.9647 = 6.6078 < 8.5901] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)T395.CB) [> 3.8153 = 6.3588 < 8.2664] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)K396.CB) [> 2.8178 = 4.6963 < 6.1052] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)T395.CB) [> 4.3329 = 7.2215 < 9.3879] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)K396.CB) [> 4.1799 = 6.9665 < 9.0564] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)T395.CB) [> 2.6554 = 4.4257 < 5.7533] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)Y394.CB) [> 3.9320 = 6.5533 < 8.5193] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)Y363.CB, (T0356)Y394.CB) [> 3.4430 = 5.7383 < 7.4598] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)W415.CB, (T0356)N432.CB) [> 4.5002 = 7.5004 < 9.7505] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)I414.CB, (T0356)F440.CB) [> 4.4455 = 7.4092 < 9.6320] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)L438.CB) [> 3.7262 = 6.2102 < 8.0733] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)Y437.CB) [> 4.3878 = 7.3130 < 9.5069] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)Y437.CB) [> 3.5302 = 5.8836 < 7.6487] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)D436.CB) [> 3.3702 = 5.6170 < 7.3020] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)D436.CB) [> 3.2900 = 5.4833 < 7.1282] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)P434.CB) [> 3.6795 = 6.1325 < 7.9723] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)P434.CB) [> 3.6118 = 6.0197 < 7.8256] w=0.1173 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)F354.CB) [> 3.6020 = 6.0033 < 7.8043] w=0.1171 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)T122.CB) [> 4.3592 = 7.2653 < 9.4450] w=0.1150 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)M382.CB) [> 4.1786 = 6.9643 < 9.0536] w=0.1145 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)S319.CB) [> 3.5178 = 5.8630 < 7.6219] w=0.1140 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)S319.CB) [> 3.5708 = 5.9513 < 7.7367] w=0.1140 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)T320.CB) [> 3.9082 = 6.5137 < 8.4678] w=0.1140 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)T320.CB) [> 3.4191 = 5.6984 < 7.4080] w=0.1140 to align
# Constraint # added constraint: constraint((T0356)G293.CA, (T0356)T307.CB) [> 3.8972 = 6.4954 < 8.4440] w=0.1129 to align
# Constraint # added constraint: constraint((T0356)G293.CA, (T0356)V306.CB) [> 3.6898 = 6.1497 < 7.9946] w=0.1129 to align
# Constraint # added constraint: constraint((T0356)T292.CB, (T0356)V306.CB) [> 3.8769 = 6.4616 < 8.4000] w=0.1129 to align
# Constraint # added constraint: constraint((T0356)P434.CB, (T0356)P460.CB) [> 3.3219 = 5.5364 < 7.1974] w=0.1104 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)K458.CB) [> 3.5411 = 5.9018 < 7.6723] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)K458.CB) [> 4.0961 = 6.8268 < 8.8749] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)W459.CB) [> 3.6679 = 6.1132 < 7.9472] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)L332.CB, (T0356)V385.CB) [> 4.0984 = 6.8306 < 8.8798] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)A366.CB) [> 4.3909 = 7.3182 < 9.5136] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)L365.CB) [> 2.8420 = 4.7367 < 6.1577] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)T307.CB, (T0356)Y321.CB) [> 4.6645 = 7.7742 < 10.1065] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)V368.CB) [> 4.3425 = 7.2376 < 9.4088] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)V367.CB) [> 4.6389 = 7.7315 < 10.0510] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)V367.CB) [> 3.1901 = 5.3168 < 6.9119] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)A366.CB) [> 4.4307 = 7.3846 < 9.5999] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)V385.CB, (T0356)K458.CB) [> 3.5524 = 5.9206 < 7.6968] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)K458.CB) [> 2.5498 = 4.2497 < 5.5246] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)L332.CB, (T0356)F392.CB) [> 4.4203 = 7.3672 < 9.5774] w=0.1092 to align
# Constraint # added constraint: constraint((T0356)L125.CB, (T0356)W161.CB) [> 2.6442 = 4.4070 < 5.7291] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)H377.CB) [> 2.8918 = 4.8196 < 6.2655] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)V352.CB) [> 3.3695 = 5.6159 < 7.3007] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)P98.CB, (T0356)V272.CB) [> 4.0758 = 6.7930 < 8.8309] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)G293.CA, (T0356)P302.CB) [> 4.5508 = 7.5848 < 9.8602] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)G293.CA, (T0356)V303.CB) [> 3.7873 = 6.3121 < 8.2057] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)D353.CB) [> 4.5658 = 7.6096 < 9.8925] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)Y355.CB) [> 4.3497 = 7.2495 < 9.4243] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)G384.CA) [> 4.5750 = 7.6251 < 9.9126] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)V385.CB) [> 3.8242 = 6.3737 < 8.2858] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)V352.CB) [> 3.9175 = 6.5291 < 8.4878] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)I351.CB) [> 4.7078 = 7.8464 < 10.2003] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)Q174.CB, (T0356)I351.CB) [> 4.6647 = 7.7745 < 10.1069] w=0.1087 to align
# Constraint # added constraint: constraint((T0356)E264.CB, (T0356)Q279.CB) [> 2.9731 = 4.9552 < 6.4418] w=0.1063 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)Y317.CB) [> 3.2769 = 5.4615 < 7.1000] w=0.1063 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)Y355.CB) [> 4.7551 = 7.9251 < 10.3026] w=0.1063 to align
# Constraint # added constraint: constraint((T0356)S449.CB, (T0356)I490.CB) [> 3.2574 = 5.4290 < 7.0577] w=0.1063 to align
# Constraint # added constraint: constraint((T0356)I417.CB, (T0356)I490.CB) [> 4.0526 = 6.7543 < 8.7806] w=0.1063 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)I414.CB) [> 4.6006 = 7.6676 < 9.9679] w=0.1063 to align
# Constraint # added constraint: constraint((T0356)D403.CB, (T0356)L453.CB) [> 3.5916 = 5.9860 < 7.7818] w=0.1063 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)V368.CB) [> 3.7219 = 6.2031 < 8.0641] w=0.1056 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)V367.CB) [> 4.4974 = 7.4956 < 9.7443] w=0.1056 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)V367.CB) [> 4.1692 = 6.9486 < 9.0332] w=0.1056 to align
# Constraint # added constraint: constraint((T0356)V255.CB, (T0356)G275.CA) [> 4.2939 = 7.1564 < 9.3034] w=0.1044 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)R192.CB) [> 4.1319 = 6.8864 < 8.9524] w=0.1020 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)R192.CB) [> 4.5826 = 7.6376 < 9.9289] w=0.1020 to align
# Constraint # added constraint: constraint((T0356)Q19.CB, (T0356)K188.CB) [> 3.6503 = 6.0839 < 7.9090] w=0.1020 to align
# Constraint # added constraint: constraint((T0356)Q19.CB, (T0356)L189.CB) [> 3.5988 = 5.9979 < 7.7973] w=0.1020 to align
# Constraint # added constraint: constraint((T0356)L22.CB, (T0356)V117.CB) [> 3.2221 = 5.3702 < 6.9812] w=0.1020 to align
# Constraint # added constraint: constraint((T0356)L27.CB, (T0356)I190.CB) [> 4.4675 = 7.4458 < 9.6795] w=0.1020 to align
# Constraint # added constraint: constraint((T0356)G57.CA, (T0356)P121.CB) [> 4.2345 = 7.0574 < 9.1747] w=0.1020 to align
# Constraint # added constraint: constraint((T0356)V255.CB, (T0356)L365.CB) [> 4.0630 = 6.7718 < 8.8033] w=0.1020 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)M382.CB) [> 4.7743 = 7.9572 < 10.3444] w=0.1020 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)L163.CB) [> 4.0097 = 6.6829 < 8.6877] w=0.1011 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)L163.CB) [> 4.5335 = 7.5558 < 9.8225] w=0.1011 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)G162.CA) [> 3.4307 = 5.7179 < 7.4332] w=0.1011 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)L163.CB) [> 2.4733 = 4.1221 < 5.3587] w=0.1011 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)V82.CB) [> 3.8799 = 6.4666 < 8.4065] w=0.1011 to align
# Constraint # added constraint: constraint((T0356)M120.CB, (T0356)Q131.CB) [> 4.7018 = 7.8363 < 10.1872] w=0.0994 to align
# Constraint # added constraint: constraint((T0356)L142.CB, (T0356)R173.CB) [> 2.8579 = 4.7631 < 6.1921] w=0.0994 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)Y317.CB) [> 3.6416 = 6.0693 < 7.8901] w=0.0994 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)S319.CB) [> 3.8540 = 6.4233 < 8.3503] w=0.0994 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)R192.CB) [> 4.2725 = 7.1208 < 9.2571] w=0.0973 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)R192.CB) [> 2.7466 = 4.5777 < 5.9510] w=0.0973 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)N406.CB) [> 2.9248 = 4.8748 < 6.3372] w=0.0973 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)C401.CB) [> 4.2677 = 7.1128 < 9.2466] w=0.0971 to align
# Constraint # added constraint: constraint((T0356)K23.CB, (T0356)C64.CB) [> 4.0348 = 6.7246 < 8.7420] w=0.0968 to align
# Constraint # added constraint: constraint((T0356)L22.CB, (T0356)C64.CB) [> 3.1586 = 5.2643 < 6.8436] w=0.0968 to align
# Constraint # added constraint: constraint((T0356)T26.CB, (T0356)P61.CB) [> 3.8552 = 6.4254 < 8.3530] w=0.0968 to align
# Constraint # added constraint: constraint((T0356)T26.CB, (T0356)V62.CB) [> 4.1414 = 6.9023 < 8.9730] w=0.0968 to align
# Constraint # added constraint: constraint((T0356)I134.CB, (T0356)A245.CB) [> 2.9515 = 4.9191 < 6.3949] w=0.0913 to align
# Constraint # added constraint: constraint((T0356)T42.CB, (T0356)L66.CB) [> 4.0527 = 6.7546 < 8.7809] w=0.0913 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)I159.CB) [> 4.4855 = 7.4759 < 9.7187] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)T160.CB) [> 3.6173 = 6.0289 < 7.8375] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)C130.CB) [> 4.5678 = 7.6130 < 9.8968] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)K133.CB) [> 2.0196 = 3.3659 < 4.3757] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)A156.CB) [> 4.4349 = 7.3914 < 9.6089] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)K133.CB) [> 4.7407 = 7.9012 < 10.2715] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)T160.CB) [> 3.1020 = 5.1700 < 6.7210] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)A156.CB) [> 2.6634 = 4.4389 < 5.7706] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)A155.CB) [> 4.3911 = 7.3185 < 9.5141] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)E153.CB) [> 2.6360 = 4.3934 < 5.7114] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)L163.CB) [> 4.4375 = 7.3959 < 9.6146] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)G162.CA) [> 3.8486 = 6.4143 < 8.3386] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)W161.CB) [> 4.5007 = 7.5011 < 9.7515] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)T160.CB) [> 2.4855 = 4.1426 < 5.3854] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)I159.CB) [> 4.1395 = 6.8991 < 8.9689] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)L158.CB) [> 4.7532 = 7.9220 < 10.2986] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)T160.CB) [> 3.7710 = 6.2850 < 8.1705] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)I159.CB) [> 2.1644 = 3.6074 < 4.6896] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)L158.CB) [> 4.1271 = 6.8784 < 8.9420] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)T160.CB) [> 2.7176 = 4.5293 < 5.8882] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)L158.CB) [> 3.3893 = 5.6488 < 7.3435] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)P157.CB) [> 4.5179 = 7.5298 < 9.7887] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)A156.CB) [> 4.5349 = 7.5582 < 9.8256] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)I147.CB) [> 4.0599 = 6.7666 < 8.7966] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)K56.CB, (T0356)C361.CB) [> 4.5222 = 7.5371 < 9.7982] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)P157.CB) [> 3.7541 = 6.2569 < 8.1340] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)A156.CB) [> 3.9658 = 6.6096 < 8.5925] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)A155.CB) [> 2.8662 = 4.7770 < 6.2101] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)D154.CB) [> 3.8358 = 6.3930 < 8.3109] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)E153.CB) [> 3.5429 = 5.9048 < 7.6762] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)F67.CB) [> 4.2638 = 7.1064 < 9.2383] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)A155.CB) [> 4.7116 = 7.8526 < 10.2084] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)P152.CB) [> 4.4744 = 7.4573 < 9.6945] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)W151.CB) [> 4.1751 = 6.9585 < 9.0461] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)W151.CB) [> 3.3658 = 5.6096 < 7.2925] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)M148.CB) [> 2.5905 = 4.3175 < 5.6127] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)I147.CB) [> 3.1861 = 5.3102 < 6.9032] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)K133.CB) [> 3.9439 = 6.5731 < 8.5451] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M77.CB, (T0356)A441.CB) [> 4.6295 = 7.7159 < 10.0307] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M77.CB, (T0356)W415.CB) [> 4.3142 = 7.1904 < 9.3475] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)G76.CA, (T0356)P443.CB) [> 3.9246 = 6.5409 < 8.5032] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)G76.CA, (T0356)A441.CB) [> 3.9287 = 6.5479 < 8.5123] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M75.CB, (T0356)T418.CB) [> 4.4563 = 7.4272 < 9.6554] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V73.CB, (T0356)I159.CB) [> 3.0798 = 5.1329 < 6.6728] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)V165.CB) [> 4.7332 = 7.8887 < 10.2553] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)W161.CB) [> 3.8556 = 6.4260 < 8.3538] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)T160.CB) [> 4.1768 = 6.9614 < 9.0498] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)I159.CB) [> 4.4450 = 7.4084 < 9.6309] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)V82.CB) [> 3.2887 = 5.4812 < 7.1255] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)L263.CB) [> 2.9660 = 4.9433 < 6.4262] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)T227.CB) [> 4.1669 = 6.9449 < 9.0284] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)V165.CB) [> 4.0952 = 6.8253 < 8.8729] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)L263.CB) [> 4.7675 = 7.9459 < 10.3297] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)G286.CA) [> 4.5285 = 7.5474 < 9.8117] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)L263.CB) [> 2.9170 = 4.8617 < 6.3201] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)I25.CB, (T0356)G199.CA) [> 3.7890 = 6.3150 < 8.2094] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)I25.CB, (T0356)G198.CA) [> 3.9483 = 6.5805 < 8.5547] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)I25.CB, (T0356)L189.CB) [> 2.6937 = 4.4894 < 5.8363] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)I25.CB, (T0356)K188.CB) [> 4.1122 = 6.8537 < 8.9099] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L33.CB, (T0356)Y203.CB) [> 4.2979 = 7.1632 < 9.3122] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P31.CB, (T0356)V73.CB) [> 4.0086 = 6.6810 < 8.6853] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P31.CB, (T0356)R72.CB) [> 3.7348 = 6.2246 < 8.0920] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)R10.CB, (T0356)E53.CB) [> 3.3181 = 5.5301 < 7.1892] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T42.CB, (T0356)A155.CB) [> 3.3528 = 5.5880 < 7.2644] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)F67.CB) [> 4.0113 = 6.6854 < 8.6910] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)L66.CB) [> 3.3763 = 5.6272 < 7.3154] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)F67.CB) [> 1.9033 = 3.1721 < 4.1237] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)L66.CB) [> 4.3032 = 7.1721 < 9.3237] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)F67.CB) [> 3.4857 = 5.8094 < 7.5522] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L43.CB, (T0356)A441.CB) [> 4.1207 = 6.8678 < 8.9282] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)I351.CB) [> 4.1857 = 6.9761 < 9.0689] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)L356.CB) [> 3.7455 = 6.2425 < 8.1153] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)S260.CB) [> 3.3261 = 5.5436 < 7.2066] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)C258.CB) [> 3.2226 = 5.3710 < 6.9824] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)G230.CA, (T0356)C361.CB) [> 4.5305 = 7.5509 < 9.8161] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)S260.CB) [> 3.0856 = 5.1427 < 6.6855] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)I259.CB) [> 3.8599 = 6.4332 < 8.3632] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)C258.CB) [> 2.7812 = 4.6353 < 6.0259] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P287.CB, (T0356)T322.CB) [> 3.0315 = 5.0525 < 6.5682] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P287.CB, (T0356)Y321.CB) [> 3.3369 = 5.5615 < 7.2300] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)G286.CA, (T0356)Y321.CB) [> 3.3315 = 5.5525 < 7.2183] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)S268.CB, (T0356)G323.CA) [> 3.5792 = 5.9654 < 7.7550] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)G286.CA) [> 4.2925 = 7.1541 < 9.3004] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)E285.CB) [> 3.3438 = 5.5730 < 7.2449] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)L356.CB) [> 4.6869 = 7.8114 < 10.1549] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)S260.CB) [> 2.9021 = 4.8369 < 6.2880] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)I259.CB) [> 3.8342 = 6.3903 < 8.3074] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)G230.CA) [> 4.0744 = 6.7907 < 8.8279] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)S260.CB) [> 4.6268 = 7.7114 < 10.0248] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)S260.CB) [> 4.2950 = 7.1583 < 9.3058] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)G246.CA) [> 4.7357 = 7.8927 < 10.2606] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)Y355.CB) [> 3.7117 = 6.1861 < 8.0419] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)I351.CB) [> 3.1604 = 5.2673 < 6.8475] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)R214.CB, (T0356)E254.CB) [> 3.4914 = 5.8190 < 7.5647] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)A226.CB, (T0356)L356.CB) [> 2.3031 = 3.8386 < 4.9901] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)G286.CA) [> 3.6611 = 6.1019 < 7.9324] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)E285.CB) [> 2.6244 = 4.3740 < 5.6861] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)S260.CB) [> 3.7252 = 6.2086 < 8.0712] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)S260.CB) [> 4.6774 = 7.7956 < 10.1343] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)L429.CB) [> 4.0452 = 6.7421 < 8.7647] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)T427.CB) [> 2.7950 = 4.6584 < 6.0559] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)N406.CB) [> 4.5553 = 7.5921 < 9.8697] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V428.CB, (T0356)F440.CB) [> 4.3061 = 7.1768 < 9.3299] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V428.CB, (T0356)D439.CB) [> 4.7505 = 7.9175 < 10.2928] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T427.CB, (T0356)F440.CB) [> 4.6288 = 7.7146 < 10.0290] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T427.CB, (T0356)D439.CB) [> 4.1465 = 6.9108 < 8.9840] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)P423.CB) [> 4.6594 = 7.7656 < 10.0953] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)P423.CB) [> 4.1541 = 6.9236 < 9.0006] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T395.CB, (T0356)T427.CB) [> 4.2550 = 7.0917 < 9.2193] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)H377.CB, (T0356)D436.CB) [> 3.9899 = 6.6499 < 8.6449] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M148.CB, (T0356)S195.CB) [> 4.6864 = 7.8106 < 10.1538] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M148.CB, (T0356)L194.CB) [> 3.0566 = 5.0944 < 6.6227] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)I147.CB, (T0356)A156.CB) [> 4.4638 = 7.4397 < 9.6716] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)K133.CB, (T0356)L158.CB) [> 3.0565 = 5.0942 < 6.6224] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)K133.CB, (T0356)A156.CB) [> 3.6240 = 6.0400 < 7.8520] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)K133.CB, (T0356)M148.CB) [> 3.9483 = 6.5806 < 8.5548] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)Q132.CB, (T0356)P225.CB) [> 4.6225 = 7.7041 < 10.0153] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)Q132.CB, (T0356)I147.CB) [> 3.6915 = 6.1526 < 7.9983] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)Q131.CB, (T0356)G446.CA) [> 3.5672 = 5.9453 < 7.7289] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)Q131.CB, (T0356)P443.CB) [> 3.3962 = 5.6603 < 7.3584] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)Q131.CB, (T0356)S362.CB) [> 3.1178 = 5.1964 < 6.7553] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)C130.CB, (T0356)R192.CB) [> 4.2448 = 7.0746 < 9.1970] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)C130.CB, (T0356)G162.CA) [> 4.4971 = 7.4952 < 9.7438] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L158.CB, (T0356)R192.CB) [> 2.5933 = 4.3222 < 5.6188] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L158.CB, (T0356)M191.CB) [> 4.0444 = 6.7407 < 8.7628] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P157.CB, (T0356)R192.CB) [> 4.3382 = 7.2303 < 9.3994] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P157.CB, (T0356)M191.CB) [> 3.6909 = 6.1515 < 7.9969] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T149.CB, (T0356)P443.CB) [> 4.2307 = 7.0511 < 9.1664] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T149.CB, (T0356)G198.CA) [> 3.0947 = 5.1578 < 6.7052] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T149.CB, (T0356)R197.CB) [> 3.0955 = 5.1592 < 6.7070] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T149.CB, (T0356)H196.CB) [> 4.4165 = 7.3609 < 9.5692] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M148.CB, (T0356)G199.CA) [> 4.6161 = 7.6936 < 10.0016] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M148.CB, (T0356)G198.CA) [> 2.4620 = 4.1034 < 5.3344] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M148.CB, (T0356)R197.CB) [> 4.4481 = 7.4135 < 9.6376] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)M148.CB, (T0356)H196.CB) [> 4.2194 = 7.0324 < 9.1421] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)C130.CB, (T0356)T160.CB) [> 3.5474 = 5.9123 < 7.6860] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)C130.CB, (T0356)L158.CB) [> 3.1189 = 5.1981 < 6.7575] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P129.CB, (T0356)L229.CB) [> 3.4562 = 5.7603 < 7.4884] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P129.CB, (T0356)I228.CB) [> 4.3690 = 7.2816 < 9.4661] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)P129.CB, (T0356)A226.CB) [> 3.3612 = 5.6020 < 7.2826] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)A128.CB, (T0356)I147.CB) [> 4.3538 = 7.2563 < 9.4332] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)K123.CB, (T0356)W151.CB) [> 3.3564 = 5.5940 < 7.2722] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)I184.CB, (T0356)G323.CA) [> 4.7332 = 7.8886 < 10.2552] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)A441.CB) [> 3.9287 = 6.5479 < 8.5123] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)K186.CB, (T0356)G286.CA) [> 3.6312 = 6.0519 < 7.8675] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)G198.CA) [> 3.3068 = 5.5114 < 7.1648] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)G323.CA) [> 4.5748 = 7.6247 < 9.9121] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)G198.CA) [> 4.2952 = 7.1586 < 9.3062] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)I184.CB) [> 3.3440 = 5.5732 < 7.2452] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)I184.CB) [> 2.2905 = 3.8175 < 4.9627] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)T160.CB, (T0356)G198.CA) [> 4.7308 = 7.8846 < 10.2500] w=0.0885 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)I399.CB) [> 4.1813 = 6.9688 < 9.0595] w=0.0852 to align
# Constraint # added constraint: constraint((T0356)G177.CA, (T0356)M191.CB) [> 3.6901 = 6.1502 < 7.9952] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)E431.CB) [> 3.3988 = 5.6646 < 7.3640] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)R72.CB, (T0356)Y179.CB) [> 2.9214 = 4.8690 < 6.3297] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)V73.CB, (T0356)R180.CB) [> 4.4605 = 7.4342 < 9.6644] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)V73.CB, (T0356)Q181.CB) [> 4.4315 = 7.3859 < 9.6016] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)V73.CB, (T0356)I399.CB) [> 3.3999 = 5.6665 < 7.3664] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)V73.CB, (T0356)V400.CB) [> 3.3337 = 5.5562 < 7.2230] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)M75.CB, (T0356)G177.CA) [> 4.7913 = 7.9855 < 10.3811] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)M75.CB, (T0356)I178.CB) [> 3.2701 = 5.4502 < 7.0852] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)M75.CB, (T0356)Y179.CB) [> 3.1145 = 5.1908 < 6.7480] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)G76.CA, (T0356)Q181.CB) [> 3.3850 = 5.6417 < 7.3342] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)M77.CB, (T0356)R180.CB) [> 4.4865 = 7.4775 < 9.7207] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)H377.CB, (T0356)V405.CB) [> 3.3715 = 5.6191 < 7.3049] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)H377.CB, (T0356)N406.CB) [> 3.4396 = 5.7327 < 7.4525] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)T427.CB) [> 4.0819 = 6.8032 < 8.8442] w=0.0832 to align
# Constraint # added constraint: constraint((T0356)F94.CB, (T0356)L107.CB) [> 2.9135 = 4.8559 < 6.3127] w=0.0809 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)I399.CB) [> 3.7637 = 6.2729 < 8.1547] w=0.0763 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)G384.CA) [> 2.9925 = 4.9875 < 6.4837] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)V385.CB) [> 2.7491 = 4.5818 < 5.9564] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)T395.CB) [> 4.5410 = 7.5683 < 9.8388] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)H377.CB) [> 3.7775 = 6.2959 < 8.1847] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)L43.CB, (T0356)Y394.CB) [> 4.4068 = 7.3446 < 9.5480] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)A378.CB) [> 4.0975 = 6.8292 < 8.8780] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)L429.CB, (T0356)D439.CB) [> 3.8606 = 6.4343 < 8.3646] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)H377.CB) [> 3.5297 = 5.8828 < 7.6476] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)M382.CB) [> 3.2944 = 5.4907 < 7.1379] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)V385.CB) [> 3.9075 = 6.5125 < 8.4663] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)M382.CB) [> 3.2285 = 5.3809 < 6.9952] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)V385.CB) [> 4.6605 = 7.7675 < 10.0978] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)H377.CB) [> 3.3571 = 5.5952 < 7.2738] w=0.0736 to align
# Constraint # added constraint: constraint((T0356)F94.CB, (T0356)F114.CB) [> 3.1796 = 5.2994 < 6.8892] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)M77.CB, (T0356)I159.CB) [> 4.6181 = 7.6968 < 10.0059] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)E87.CB, (T0356)V117.CB) [> 4.3063 = 7.1771 < 9.3303] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)E87.CB, (T0356)L158.CB) [> 4.3094 = 7.1822 < 9.3369] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V117.CB, (T0356)C258.CB) [> 3.3663 = 5.6105 < 7.2936] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V117.CB, (T0356)I259.CB) [> 3.5272 = 5.8786 < 7.6422] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)Y58.CB, (T0356)A269.CB) [> 4.6867 = 7.8112 < 10.1546] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)W161.CB) [> 3.0659 = 5.1098 < 6.6428] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)Y6.CB, (T0356)E37.CB) [> 2.7232 = 4.5386 < 5.9002] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)Y6.CB, (T0356)R41.CB) [> 2.8354 = 4.7257 < 6.1434] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)Y6.CB, (T0356)T418.CB) [> 4.6652 = 7.7754 < 10.1080] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V73.CB, (T0356)V165.CB) [> 3.8470 = 6.4116 < 8.3351] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)M75.CB, (T0356)L158.CB) [> 3.2603 = 5.4338 < 7.0640] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)M75.CB, (T0356)I309.CB) [> 4.1321 = 6.8868 < 8.9529] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)M75.CB, (T0356)T427.CB) [> 3.7834 = 6.3056 < 8.1973] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)K396.CB, (T0356)Y437.CB) [> 4.1570 = 6.9283 < 9.0068] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)F397.CB, (T0356)Y437.CB) [> 3.4735 = 5.7891 < 7.5258] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)D439.CB) [> 4.4979 = 7.4965 < 9.7455] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V398.CB, (T0356)F440.CB) [> 3.0584 = 5.0973 < 6.6265] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)E431.CB) [> 3.1271 = 5.2118 < 6.7753] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)D439.CB) [> 3.2905 = 5.4841 < 7.1294] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)I399.CB, (T0356)F440.CB) [> 3.7017 = 6.1694 < 8.0203] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)R420.CB) [> 4.1367 = 6.8945 < 8.9628] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V400.CB, (T0356)F440.CB) [> 2.1756 = 3.6260 < 4.7138] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)C401.CB, (T0356)D439.CB) [> 4.6787 = 7.7978 < 10.1372] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)T395.CB) [> 3.4896 = 5.8161 < 7.5609] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)K396.CB) [> 2.7104 = 4.5174 < 5.8726] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)F397.CB) [> 4.0584 = 6.7641 < 8.7933] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)I351.CB, (T0356)V400.CB) [> 3.3082 = 5.5137 < 7.1677] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)K396.CB) [> 4.5134 = 7.5224 < 9.7791] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)F397.CB) [> 3.3470 = 5.5784 < 7.2519] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V352.CB, (T0356)V400.CB) [> 4.0440 = 6.7401 < 8.7621] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)N406.CB) [> 3.0431 = 5.0718 < 6.5933] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)D353.CB, (T0356)F440.CB) [> 3.7414 = 6.2357 < 8.1064] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)F354.CB, (T0356)C401.CB) [> 3.6214 = 6.0357 < 7.8465] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)V400.CB) [> 2.5229 = 4.2048 < 5.4662] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)C401.CB) [> 4.6414 = 7.7356 < 10.0563] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)C401.CB) [> 4.4329 = 7.3882 < 9.6046] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)M382.CB, (T0356)V400.CB) [> 4.3287 = 7.2145 < 9.3788] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)S445.CB, (T0356)K458.CB) [> 4.5859 = 7.6431 < 9.9360] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)L453.CB, (T0356)L488.CB) [> 4.5296 = 7.5494 < 9.8142] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)D436.CB, (T0356)K458.CB) [> 4.7825 = 7.9709 < 10.3621] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)L263.CB, (T0356)I277.CB) [> 2.9590 = 4.9316 < 6.4111] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)A269.CB, (T0356)S387.CB) [> 4.6368 = 7.7280 < 10.0464] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)L263.CB, (T0356)Y276.CB) [> 4.1421 = 6.9036 < 8.9746] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)V385.CB) [> 4.7550 = 7.9250 < 10.3026] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)Y355.CB) [> 2.3096 = 3.8493 < 5.0040] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)V400.CB) [> 4.2176 = 7.0293 < 9.1381] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)L356.CB) [> 4.1818 = 6.9697 < 9.0606] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)V385.CB) [> 4.7550 = 7.9250 < 10.3026] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)D353.CB) [> 4.3793 = 7.2988 < 9.4884] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)G323.CA, (T0356)F354.CB) [> 4.4889 = 7.4816 < 9.7260] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)E270.CB, (T0356)T395.CB) [> 3.0027 = 5.0045 < 6.5059] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)E270.CB, (T0356)K396.CB) [> 3.8903 = 6.4839 < 8.4291] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V272.CB, (T0356)I351.CB) [> 3.4894 = 5.8158 < 7.5605] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V272.CB, (T0356)T395.CB) [> 4.1349 = 6.8915 < 8.9589] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)I277.CB, (T0356)E313.CB) [> 3.5699 = 5.9499 < 7.7349] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)I399.CB) [> 3.2960 = 5.4933 < 7.1413] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)V400.CB) [> 3.3139 = 5.5231 < 7.1800] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)V352.CB) [> 3.7460 = 6.2433 < 8.1163] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)Y355.CB) [> 4.0513 = 6.7522 < 8.7778] w=0.0706 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)V385.CB) [> 3.5355 = 5.8925 < 7.6603] w=0.0687 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)I178.CB) [> 3.4545 = 5.7574 < 7.4847] w=0.0683 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)Y179.CB) [> 4.3992 = 7.3320 < 9.5316] w=0.0683 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)G222.CA) [> 3.7662 = 6.2770 < 8.1601] w=0.0683 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)Q181.CB) [> 3.9650 = 6.6083 < 8.5907] w=0.0683 to align
# Constraint # added constraint: constraint((T0356)Q181.CB, (T0356)V219.CB) [> 4.3712 = 7.2853 < 9.4709] w=0.0683 to align
# Constraint # added constraint: constraint((T0356)A226.CB, (T0356)S268.CB) [> 2.9033 = 4.8389 < 6.2906] w=0.0683 to align
# Constraint # added constraint: constraint((T0356)I147.CB, (T0356)W161.CB) [> 3.9789 = 6.6315 < 8.6210] w=0.0678 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)F397.CB) [> 4.3656 = 7.2760 < 9.4588] w=0.0675 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)F397.CB) [> 2.9073 = 4.8455 < 6.2991] w=0.0675 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)F397.CB) [> 3.2863 = 5.4772 < 7.1204] w=0.0675 to align
# Constraint # added constraint: constraint((T0356)P423.CB, (T0356)D439.CB) [> 4.7098 = 7.8496 < 10.2045] w=0.0658 to align
# Constraint # added constraint: constraint((T0356)L15.CB, (T0356)L95.CB) [> 3.6529 = 6.0881 < 7.9145] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)G199.CA, (T0356)V232.CB) [> 2.5921 = 4.3201 < 5.6162] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)D202.CB, (T0356)G246.CA) [> 4.4083 = 7.3471 < 9.5512] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)Y242.CB) [> 2.9376 = 4.8959 < 6.3647] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)G246.CA) [> 4.7321 = 7.8868 < 10.2528] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)V232.CB) [> 4.6647 = 7.7746 < 10.1069] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)V135.CB, (T0356)A245.CB) [> 4.5647 = 7.6079 < 9.8902] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)I134.CB, (T0356)T251.CB) [> 3.3781 = 5.6301 < 7.3192] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)I134.CB, (T0356)G246.CA) [> 2.9173 = 4.8622 < 6.3209] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)I134.CB, (T0356)Y242.CB) [> 4.2825 = 7.1375 < 9.2788] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)I134.CB, (T0356)G198.CA) [> 3.7676 = 6.2793 < 8.1631] w=0.0647 to align
# Constraint # added constraint: constraint((T0356)C130.CB, (T0356)G198.CA) [> 3.9146 = 6.5243 < 8.4816] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)Q131.CB, (T0356)G198.CA) [> 3.0081 = 5.0135 < 6.5176] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)V135.CB, (T0356)A226.CB) [> 2.5513 = 4.2522 < 5.5279] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)V255.CB) [> 3.2166 = 5.3610 < 6.9693] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)G198.CA, (T0356)Q311.CB) [> 3.4024 = 5.6707 < 7.3719] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)G199.CA, (T0356)Q311.CB) [> 2.5567 = 4.2612 < 5.5396] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)R214.CB) [> 4.0468 = 6.7447 < 8.7681] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)P61.CB, (T0356)P216.CB) [> 3.0134 = 5.0224 < 6.5291] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)P216.CB) [> 3.7897 = 6.3162 < 8.2110] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)V62.CB, (T0356)V217.CB) [> 2.9775 = 4.9625 < 6.4513] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)V217.CB) [> 4.6254 = 7.7090 < 10.0217] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)S218.CB) [> 2.8762 = 4.7937 < 6.2319] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)F244.CB) [> 4.1282 = 6.8803 < 8.9444] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)S218.CB) [> 4.6546 = 7.7576 < 10.0849] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)L221.CB) [> 3.5942 = 5.9904 < 7.7875] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)P55.CB, (T0356)L95.CB) [> 3.6384 = 6.0641 < 7.8833] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)K56.CB, (T0356)L95.CB) [> 2.6919 = 4.4865 < 5.8324] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)A226.CB) [> 3.3428 = 5.5713 < 7.2426] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)S218.CB) [> 3.9718 = 6.6197 < 8.6056] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)V219.CB) [> 4.2509 = 7.0848 < 9.2102] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)A220.CB) [> 3.2883 = 5.4805 < 7.1246] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)A226.CB) [> 3.0756 = 5.1259 < 6.6637] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)N65.CB, (T0356)F244.CB) [> 3.8035 = 6.3392 < 8.2409] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)A220.CB) [> 4.6742 = 7.7903 < 10.1274] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)L221.CB) [> 2.7114 = 4.5189 < 5.8746] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)G222.CA) [> 3.6893 = 6.1489 < 7.9936] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)L66.CB, (T0356)A226.CB) [> 3.0914 = 5.1524 < 6.6982] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)L221.CB) [> 4.7899 = 7.9831 < 10.3780] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)F67.CB, (T0356)G222.CA) [> 3.5684 = 5.9473 < 7.7315] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)G289.CA, (T0356)P325.CB) [> 4.6034 = 7.6723 < 9.9740] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)G289.CA, (T0356)I351.CB) [> 4.6962 = 7.8270 < 10.1751] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)Y294.CB, (T0356)I309.CB) [> 3.9030 = 6.5051 < 8.4566] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)T282.CB) [> 4.5211 = 7.5351 < 9.7956] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)A283.CB) [> 4.2670 = 7.1116 < 9.2451] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)Q279.CB, (T0356)Y321.CB) [> 3.8538 = 6.4231 < 8.3500] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)P287.CB, (T0356)V352.CB) [> 2.8807 = 4.8012 < 6.2416] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)P287.CB, (T0356)V385.CB) [> 4.6928 = 7.8213 < 10.1677] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)I309.CB, (T0356)S319.CB) [> 2.8125 = 4.6875 < 6.0938] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)Y317.CB, (T0356)Y355.CB) [> 4.3835 = 7.3058 < 9.4976] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)F354.CB) [> 2.9820 = 4.9701 < 6.4611] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)Y355.CB) [> 4.5500 = 7.5833 < 9.8583] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)Y355.CB) [> 2.7875 = 4.6459 < 6.0397] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)S319.CB, (T0356)L356.CB) [> 4.5329 = 7.5548 < 9.8212] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)T320.CB, (T0356)L356.CB) [> 3.5058 = 5.8431 < 7.5960] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)R364.CB) [> 3.6801 = 6.1335 < 7.9735] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)T322.CB, (T0356)H377.CB) [> 4.0921 = 6.8202 < 8.8662] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)I228.CB, (T0356)P287.CB) [> 4.7369 = 7.8949 < 10.2633] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)T322.CB) [> 2.5608 = 4.2679 < 5.5483] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)G323.CA) [> 3.7953 = 6.3256 < 8.2232] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)G286.CA) [> 4.5850 = 7.6416 < 9.9341] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)P216.CB, (T0356)P287.CB) [> 4.5633 = 7.6055 < 9.8871] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)G286.CA) [> 3.6253 = 6.0422 < 7.8549] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)T322.CB) [> 4.1828 = 6.9714 < 9.0628] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)H318.CB) [> 2.9376 = 4.8961 < 6.3649] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)T227.CB, (T0356)T320.CB) [> 3.9749 = 6.6248 < 8.6123] w=0.0639 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)V368.CB) [> 4.4268 = 7.3780 < 9.5915] w=0.0631 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)H377.CB) [> 3.7959 = 6.3264 < 8.2244] w=0.0631 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)A378.CB) [> 4.0984 = 6.8306 < 8.8798] w=0.0631 to align
# Constraint # added constraint: constraint((T0356)D403.CB, (T0356)L429.CB) [> 2.8095 = 4.6825 < 6.0872] w=0.0631 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)A378.CB) [> 2.9915 = 4.9859 < 6.4816] w=0.0599 to align
# Constraint # added constraint: constraint((T0356)I145.CB, (T0356)T160.CB) [> 3.2396 = 5.3994 < 7.0192] w=0.0589 to align
# Constraint # added constraint: constraint((T0356)V117.CB, (T0356)T164.CB) [> 4.5936 = 7.6560 < 9.9528] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)Y6.CB, (T0356)W161.CB) [> 4.1671 = 6.9451 < 9.0287] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)Y6.CB, (T0356)F67.CB) [> 4.5061 = 7.5102 < 9.7633] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)K5.CB, (T0356)Q79.CB) [> 4.4369 = 7.3948 < 9.6132] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)P98.CB) [> 4.0132 = 6.6886 < 8.6952] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)C64.CB, (T0356)L95.CB) [> 3.6745 = 6.1242 < 7.9615] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)F397.CB, (T0356)S496.CB) [> 4.6736 = 7.7894 < 10.1262] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)K371.CB, (T0356)R408.CB) [> 4.6295 = 7.7159 < 10.0307] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)L488.CB, (T0356)A497.CB) [> 3.2056 = 5.3426 < 6.9454] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)L498.CB) [> 3.2531 = 5.4218 < 7.0484] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)A497.CB) [> 3.9207 = 6.5345 < 8.4949] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)S496.CB) [> 3.2605 = 5.4342 < 7.0645] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)H500.CB) [> 4.5191 = 7.5319 < 9.7914] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)L498.CB) [> 4.5712 = 7.6187 < 9.9044] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)H500.CB) [> 3.8430 = 6.4049 < 8.3264] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)L498.CB) [> 3.7608 = 6.2680 < 8.1484] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)L356.CB, (T0356)Y437.CB) [> 4.4715 = 7.4526 < 9.6883] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)Y355.CB, (T0356)I417.CB) [> 4.1185 = 6.8642 < 8.9235] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)T369.CB, (T0356)S496.CB) [> 4.5203 = 7.5339 < 9.7940] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)A497.CB) [> 4.7250 = 7.8750 < 10.2375] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)S496.CB) [> 2.9555 = 4.9258 < 6.4036] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)A497.CB) [> 2.6226 = 4.3710 < 5.6823] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)S496.CB) [> 4.2695 = 7.1158 < 9.2505] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)F397.CB) [> 4.7349 = 7.8915 < 10.2589] w=0.0586 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)V352.CB) [> 4.0449 = 6.7414 < 8.7639] w=0.0546 to align
# Constraint # added constraint: constraint((T0356)V303.CB, (T0356)V368.CB) [> 4.4122 = 7.3537 < 9.5597] w=0.0546 to align
# Constraint # added constraint: constraint((T0356)F304.CB, (T0356)W467.CB) [> 3.5315 = 5.8859 < 7.6516] w=0.0546 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)W467.CB) [> 4.1875 = 6.9792 < 9.0730] w=0.0546 to align
# Constraint # added constraint: constraint((T0356)V306.CB, (T0356)W467.CB) [> 3.2723 = 5.4538 < 7.0899] w=0.0546 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)W467.CB) [> 4.7778 = 7.9630 < 10.3519] w=0.0546 to align
# Constraint # added constraint: constraint((T0356)D422.CB, (T0356)S442.CB) [> 4.2006 = 7.0010 < 9.1013] w=0.0546 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)H377.CB) [> 3.9027 = 6.5045 < 8.4559] w=0.0546 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)L356.CB) [> 4.6107 = 7.6846 < 9.9899] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)Y355.CB) [> 2.8542 = 4.7571 < 6.1842] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)F354.CB) [> 3.6830 = 6.1384 < 7.9799] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)A378.CB) [> 4.6878 = 7.8130 < 10.1569] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)R364.CB) [> 4.2127 = 7.0211 < 9.1275] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)L356.CB) [> 2.8853 = 4.8089 < 6.2515] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)H377.CB) [> 4.0537 = 6.7561 < 8.7830] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)L356.CB) [> 2.9111 = 4.8518 < 6.3073] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)H377.CB) [> 2.5812 = 4.3019 < 5.5925] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)A378.CB) [> 4.6901 = 7.8169 < 10.1619] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)Y355.CB) [> 2.3538 = 3.9230 < 5.1000] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)D353.CB) [> 4.6184 = 7.6974 < 10.0066] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)P129.CB, (T0356)L163.CB) [> 3.9297 = 6.5495 < 8.5143] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)P129.CB, (T0356)F354.CB) [> 3.8962 = 6.4937 < 8.4418] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)F354.CB) [> 3.7794 = 6.2989 < 8.1886] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)Y355.CB) [> 3.8609 = 6.4348 < 8.3653] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)A269.CB) [> 3.8927 = 6.4878 < 8.4341] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)F304.CB) [> 4.6409 = 7.7349 < 10.0553] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)F354.CB) [> 3.2944 = 5.4907 < 7.1378] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)V385.CB) [> 3.8698 = 6.4497 < 8.3847] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)A93.CB, (T0356)T322.CB) [> 3.9608 = 6.6013 < 8.5816] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)I271.CB, (T0356)F304.CB) [> 3.5464 = 5.9107 < 7.6840] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)I271.CB, (T0356)I316.CB) [> 3.1866 = 5.3109 < 6.9042] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)L273.CB, (T0356)H291.CB) [> 2.6521 = 4.4202 < 5.7463] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)L273.CB, (T0356)T292.CB) [> 4.7476 = 7.9127 < 10.2865] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)L273.CB, (T0356)G293.CA) [> 4.1294 = 6.8823 < 8.9470] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)L273.CB, (T0356)F304.CB) [> 4.3962 = 7.3270 < 9.5251] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)S268.CB, (T0356)Y294.CB) [> 4.1214 = 6.8690 < 8.9297] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)A269.CB, (T0356)D290.CB) [> 3.6939 = 6.1564 < 8.0034] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)E270.CB, (T0356)T292.CB) [> 3.9830 = 6.6384 < 8.6299] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)E270.CB, (T0356)Y294.CB) [> 3.4737 = 5.7894 < 7.5263] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)T292.CB, (T0356)S319.CB) [> 4.3914 = 7.3190 < 9.5147] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)E274.CB, (T0356)Y288.CB) [> 4.4784 = 7.4640 < 9.7032] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)E274.CB, (T0356)G289.CA) [> 3.8605 = 6.4342 < 8.3645] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)G275.CA, (T0356)Y288.CB) [> 3.4546 = 5.7577 < 7.4850] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)G275.CA, (T0356)G289.CA) [> 3.0190 = 5.0317 < 6.5412] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)G289.CA, (T0356)F304.CB) [> 4.3855 = 7.3092 < 9.5020] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)I178.CB, (T0356)Y317.CB) [> 4.3780 = 7.2966 < 9.4856] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)R180.CB, (T0356)V255.CB) [> 3.9672 = 6.6120 < 8.5956] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)R180.CB, (T0356)I271.CB) [> 3.9672 = 6.6120 < 8.5956] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)R180.CB, (T0356)L273.CB) [> 3.9602 = 6.6003 < 8.5804] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)R180.CB, (T0356)E313.CB) [> 3.8870 = 6.4784 < 8.4219] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)L183.CB, (T0356)R312.CB) [> 4.4871 = 7.4785 < 9.7221] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)K252.CB, (T0356)Y288.CB) [> 2.6522 = 4.4204 < 5.7465] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)T253.CB, (T0356)Y288.CB) [> 3.6620 = 6.1033 < 7.9343] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)E254.CB, (T0356)G275.CA) [> 4.4438 = 7.4063 < 9.6282] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)E254.CB, (T0356)Y288.CB) [> 3.0971 = 5.1618 < 6.7104] w=0.0544 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)P234.CB) [> 3.0496 = 5.0826 < 6.6074] w=0.0532 to align
# Constraint # added constraint: constraint((T0356)Y242.CB, (T0356)S319.CB) [> 3.3161 = 5.5268 < 7.1848] w=0.0532 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)E278.CB) [> 4.0209 = 6.7014 < 8.7119] w=0.0532 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)E278.CB) [> 3.2778 = 5.4630 < 7.1019] w=0.0532 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)P234.CB) [> 4.7744 = 7.9574 < 10.3446] w=0.0532 to align
# Constraint # added constraint: constraint((T0356)E53.CB, (T0356)S136.CB) [> 4.3427 = 7.2379 < 9.4092] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)I178.CB) [> 4.2927 = 7.1545 < 9.3008] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)L95.CB) [> 4.2845 = 7.1407 < 9.2830] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)V165.CB) [> 4.5171 = 7.5286 < 9.7872] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)I178.CB) [> 3.8702 = 6.4504 < 8.3855] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)P55.CB, (T0356)V135.CB) [> 2.4374 = 4.0623 < 5.2811] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)V135.CB) [> 4.3674 = 7.2791 < 9.4628] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L63.CB, (T0356)I178.CB) [> 4.3674 = 7.2791 < 9.4628] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L33.CB, (T0356)V165.CB) [> 4.1962 = 6.9937 < 9.0919] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L33.CB, (T0356)L183.CB) [> 4.1954 = 6.9922 < 9.0899] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)C64.CB) [> 4.4744 = 7.4573 < 9.6945] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)N65.CB) [> 4.7465 = 7.9108 < 10.2840] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)V165.CB) [> 3.8844 = 6.4739 < 8.4161] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)I178.CB) [> 2.3852 = 3.9753 < 5.1679] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)Y179.CB) [> 4.6035 = 7.6725 < 9.9742] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)A49.CB, (T0356)R180.CB) [> 4.3756 = 7.2926 < 9.4804] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)V165.CB) [> 1.9888 = 3.3147 < 4.3092] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)I35.CB, (T0356)L183.CB) [> 2.1964 = 3.6607 < 4.7589] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)G47.CA, (T0356)Q181.CB) [> 4.4133 = 7.3556 < 9.5622] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)I159.CB, (T0356)R192.CB) [> 4.2970 = 7.1617 < 9.3102] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)T305.CB, (T0356)R364.CB) [> 4.0654 = 6.7757 < 8.8084] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)V367.CB) [> 4.6042 = 7.6737 < 9.9758] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)V255.CB, (T0356)V367.CB) [> 4.0623 = 6.7705 < 8.8017] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)V135.CB, (T0356)G162.CA) [> 3.8511 = 6.4185 < 8.3441] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L118.CB, (T0356)P157.CB) [> 4.4899 = 7.4831 < 9.7280] w=0.0510 to align
# Constraint # added constraint: constraint((T0356)L142.CB, (T0356)I351.CB) [> 3.2838 = 5.4730 < 7.1149] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L142.CB, (T0356)V219.CB) [> 3.9881 = 6.6468 < 8.6408] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L142.CB, (T0356)T160.CB) [> 3.9678 = 6.6129 < 8.5968] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V140.CB, (T0356)I351.CB) [> 3.4920 = 5.8200 < 7.5661] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)D139.CB, (T0356)I351.CB) [> 3.0691 = 5.1152 < 6.6498] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I147.CB, (T0356)V217.CB) [> 3.5896 = 5.9827 < 7.7775] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I147.CB, (T0356)P216.CB) [> 2.3101 = 3.8501 < 5.0051] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I147.CB, (T0356)T160.CB) [> 2.8512 = 4.7520 < 6.1777] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)P146.CB, (T0356)L488.CB) [> 4.6688 = 7.7814 < 10.1158] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)P146.CB, (T0356)M393.CB) [> 4.7143 = 7.8571 < 10.2142] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)P146.CB, (T0356)V217.CB) [> 2.9277 = 4.8796 < 6.3434] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)P146.CB, (T0356)P216.CB) [> 4.6258 = 7.7097 < 10.0226] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)P146.CB, (T0356)F215.CB) [> 4.7238 = 7.8730 < 10.2349] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I145.CB, (T0356)M393.CB) [> 4.1200 = 6.8666 < 8.9266] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I145.CB, (T0356)V219.CB) [> 3.1737 = 5.2895 < 6.8763] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I145.CB, (T0356)V217.CB) [> 3.6612 = 6.1020 < 7.9326] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)N143.CB, (T0356)M393.CB) [> 4.3273 = 7.2122 < 9.3759] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)N143.CB, (T0356)I351.CB) [> 3.6117 = 6.0195 < 7.8253] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L142.CB, (T0356)M393.CB) [> 4.7892 = 7.9820 < 10.3766] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A128.CB, (T0356)L142.CB) [> 4.7077 = 7.8461 < 10.1999] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A128.CB, (T0356)D141.CB) [> 3.7347 = 6.2245 < 8.0919] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A128.CB, (T0356)G137.CA) [> 2.8493 = 4.7488 < 6.1734] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)F244.CB) [> 3.1321 = 5.2201 < 6.7861] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)K396.CB) [> 4.1396 = 6.8993 < 8.9691] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)T395.CB) [> 4.5019 = 7.5031 < 9.7541] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V217.CB, (T0356)Y394.CB) [> 3.2510 = 5.4184 < 7.0439] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I147.CB, (T0356)S218.CB) [> 3.9206 = 6.5343 < 8.4946] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I147.CB, (T0356)V256.CB) [> 4.4054 = 7.3423 < 9.5450] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)T160.CB, (T0356)P216.CB) [> 4.3721 = 7.2868 < 9.4729] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)T160.CB, (T0356)V217.CB) [> 2.7124 = 4.5206 < 5.8768] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)T160.CB, (T0356)S218.CB) [> 4.3374 = 7.2290 < 9.3978] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)V217.CB) [> 4.6319 = 7.7198 < 10.0358] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)S218.CB) [> 3.3215 = 5.5359 < 7.1967] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)V219.CB) [> 4.7681 = 7.9469 < 10.3309] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)A220.CB) [> 4.0610 = 6.7683 < 8.7988] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)V217.CB) [> 3.9189 = 6.5315 < 8.4909] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)G162.CA, (T0356)F244.CB) [> 4.1220 = 6.8700 < 8.9310] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)L221.CB) [> 4.1948 = 6.9913 < 9.0887] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)A223.CB) [> 4.4467 = 7.4111 < 9.6344] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)G222.CA) [> 3.0709 = 5.1181 < 6.6536] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)F244.CB) [> 3.5950 = 5.9917 < 7.7892] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)G222.CA) [> 4.4382 = 7.3971 < 9.6162] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)P31.CB, (T0356)L63.CB) [> 4.0632 = 6.7720 < 8.8035] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)H32.CB, (T0356)L63.CB) [> 2.5366 = 4.2276 < 5.4959] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)H32.CB, (T0356)C64.CB) [> 4.7620 = 7.9366 < 10.3176] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)T160.CB) [> 4.4129 = 7.3548 < 9.5613] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)W161.CB) [> 2.6595 = 4.4325 < 5.7622] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L50.CB, (T0356)G162.CA) [> 4.0017 = 6.6695 < 8.6703] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)F52.CB, (T0356)W161.CB) [> 4.7588 = 7.9313 < 10.3107] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)G162.CA) [> 3.0584 = 5.0974 < 6.6266] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)W161.CB) [> 4.3592 = 7.2653 < 9.4450] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)T160.CB) [> 3.7195 = 6.1993 < 8.0590] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L51.CB, (T0356)L142.CB) [> 4.2387 = 7.0645 < 9.1838] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)G103.CA, (T0356)V400.CB) [> 3.6967 = 6.1611 < 8.0094] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)E87.CB, (T0356)Y321.CB) [> 4.4363 = 7.3938 < 9.6119] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)D403.CB, (T0356)D439.CB) [> 4.4058 = 7.3430 < 9.5459] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)T395.CB, (T0356)I417.CB) [> 3.0646 = 5.1076 < 6.6399] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)Q279.CB, (T0356)H291.CB) [> 4.7358 = 7.8929 < 10.2608] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)Y321.CB, (T0356)R408.CB) [> 3.1252 = 5.2087 < 6.7712] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A407.CB, (T0356)F440.CB) [> 3.5652 = 5.9421 < 7.7247] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A407.CB, (T0356)G452.CA) [> 2.7925 = 4.6541 < 6.0504] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)R408.CB, (T0356)S442.CB) [> 3.7526 = 6.2544 < 8.1307] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V235.CB, (T0356)Y288.CB) [> 4.7859 = 7.9766 < 10.3695] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)T322.CB) [> 2.4915 = 4.1525 < 5.3983] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)Y276.CB) [> 4.4415 = 7.4025 < 9.6232] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)G275.CA) [> 2.6302 = 4.3836 < 5.6987] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V255.CB, (T0356)Y276.CB) [> 4.6751 = 7.7918 < 10.1294] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)T395.CB) [> 2.7560 = 4.5933 < 5.9713] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V219.CB, (T0356)K396.CB) [> 4.2175 = 7.0292 < 9.1379] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)T395.CB) [> 4.6788 = 7.7980 < 10.1374] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)K396.CB) [> 3.1000 = 5.1667 < 6.7167] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)F397.CB) [> 4.6897 = 7.8162 < 10.1611] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A220.CB, (T0356)V398.CB) [> 3.8513 = 6.4188 < 8.3445] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)Y317.CB) [> 4.3646 = 7.2743 < 9.4565] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)H318.CB) [> 3.2350 = 5.3917 < 7.0092] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)T395.CB) [> 3.3309 = 5.5515 < 7.2170] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)K396.CB) [> 4.1487 = 6.9144 < 8.9888] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)P234.CB, (T0356)T322.CB) [> 4.1196 = 6.8660 < 8.9258] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)S319.CB) [> 4.1765 = 6.9609 < 9.0492] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)A223.CB, (T0356)H318.CB) [> 3.3608 = 5.6013 < 7.2817] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)V400.CB) [> 4.6675 = 7.7791 < 10.1129] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)I399.CB) [> 3.8295 = 6.3826 < 8.2973] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)V398.CB) [> 2.6562 = 4.4269 < 5.7550] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)F397.CB) [> 3.6332 = 6.0554 < 7.8720] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)G222.CA, (T0356)H318.CB) [> 3.8516 = 6.4194 < 8.3452] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)I417.CB) [> 4.3084 = 7.1806 < 9.3348] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)V398.CB) [> 4.1893 = 6.9822 < 9.0768] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L221.CB, (T0356)F397.CB) [> 2.8284 = 4.7140 < 6.1282] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L263.CB, (T0356)Y321.CB) [> 3.1151 = 5.1918 < 6.7494] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)G275.CA, (T0356)Y317.CB) [> 4.1014 = 6.8356 < 8.8863] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)C401.CB) [> 3.1023 = 5.1705 < 6.7216] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)V400.CB) [> 4.2693 = 7.1155 < 9.2501] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)I399.CB) [> 3.8744 = 6.4573 < 8.3945] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)T322.CB) [> 3.7025 = 6.1708 < 8.0220] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)Y321.CB) [> 3.3615 = 5.6025 < 7.2832] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)V400.CB) [> 4.4533 = 7.4222 < 9.6489] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)I399.CB) [> 3.7251 = 6.2084 < 8.0710] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)V398.CB) [> 4.7858 = 7.9763 < 10.3692] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)V256.CB, (T0356)F397.CB) [> 4.7748 = 7.9580 < 10.3453] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)G323.CA) [> 3.1981 = 5.3302 < 6.9293] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)T322.CB) [> 4.3898 = 7.3163 < 9.5112] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)Y321.CB) [> 3.1479 = 5.2466 < 6.8205] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)G323.CA) [> 2.2588 = 3.7647 < 4.8941] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)T322.CB) [> 3.4724 = 5.7874 < 7.5236] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)I259.CB, (T0356)Y321.CB) [> 4.4345 = 7.3907 < 9.6080] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)A407.CB) [> 3.3643 = 5.6071 < 7.2893] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)C258.CB, (T0356)V405.CB) [> 4.4670 = 7.4449 < 9.6784] w=0.0501 to align
# Constraint # added constraint: constraint((T0356)L142.CB, (T0356)K188.CB) [> 3.8635 = 6.4391 < 8.3709] w=0.0497 to align
# Constraint # added constraint: constraint((T0356)L142.CB, (T0356)T320.CB) [> 4.3070 = 7.1782 < 9.3317] w=0.0497 to align
# Constraint # added constraint: constraint((T0356)N143.CB, (T0356)N187.CB) [> 4.3261 = 7.2102 < 9.3733] w=0.0497 to align
# Constraint # added constraint: constraint((T0356)R192.CB, (T0356)V306.CB) [> 4.7363 = 7.8939 < 10.2621] w=0.0497 to align
# Constraint # added constraint: constraint((T0356)R192.CB, (T0356)T305.CB) [> 3.4095 = 5.6826 < 7.3874] w=0.0497 to align
# Constraint # added constraint: constraint((T0356)Y203.CB, (T0356)V303.CB) [> 3.0739 = 5.1231 < 6.6600] w=0.0497 to align
# Constraint # added constraint: constraint((T0356)Q131.CB, (T0356)I259.CB) [> 3.7707 = 6.2845 < 8.1699] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)Q131.CB, (T0356)C258.CB) [> 2.9489 = 4.9148 < 6.3892] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)R124.CB, (T0356)D141.CB) [> 4.6682 = 7.7803 < 10.1144] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)V140.CB, (T0356)V217.CB) [> 3.9395 = 6.5658 < 8.5355] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)I134.CB, (T0356)V255.CB) [> 2.6071 = 4.3452 < 5.6487] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)M75.CB, (T0356)E87.CB) [> 4.6284 = 7.7140 < 10.0282] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)W386.CB, (T0356)W415.CB) [> 3.3819 = 5.6366 < 7.3275] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)D403.CB) [> 3.7564 = 6.2607 < 8.1390] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)C401.CB) [> 3.9423 = 6.5705 < 8.5417] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)L163.CB, (T0356)Y203.CB) [> 2.9188 = 4.8647 < 6.3241] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)W161.CB, (T0356)G198.CA) [> 4.0437 = 6.7396 < 8.7614] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)P146.CB, (T0356)S195.CB) [> 3.9777 = 6.6295 < 8.6184] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)I145.CB, (T0356)T164.CB) [> 4.7854 = 7.9756 < 10.3683] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)I145.CB, (T0356)G162.CA) [> 2.8247 = 4.7079 < 6.1203] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)V140.CB, (T0356)V256.CB) [> 4.0486 = 6.7477 < 8.7720] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)V140.CB, (T0356)E254.CB) [> 2.9216 = 4.8694 < 6.3302] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)V400.CB) [> 4.1522 = 6.9204 < 8.9965] w=0.0265 to align
# Constraint # added constraint: constraint((T0356)V165.CB, (T0356)I178.CB) [> 4.2095 = 7.0158 < 9.1206] w=0.0177 to align
# Constraint # added constraint: constraint((T0356)T164.CB, (T0356)I178.CB) [> 2.4940 = 4.1567 < 5.4037] w=0.0177 to align
# Constraint # added constraint: constraint((T0356)P146.CB, (T0356)L336.CB) [> 3.6411 = 6.0686 < 7.8892] w=0.0177 to align
# Constraint # added constraint: constraint((T0356)V405.CB, (T0356)A455.CB) [> 3.5480 = 5.9132 < 7.6872] w=0.0177 to align
# Constraint # added constraint: constraint((T0356)D403.CB, (T0356)T456.CB) [> 3.6254 = 6.0423 < 7.8550] w=0.0177 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)V385.CB) [> 2.8590 = 4.7650 < 6.1945] w=0.0177 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)C401.CB) [> 3.5630 = 5.9384 < 7.7199] w=0.0177 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)V385.CB) [> 3.0743 = 5.1238 < 6.6609] w=0.0177 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)K396.CB) [> 3.3142 = 5.5236 < 7.1807] w=0.0177 to align
# Constraint # added constraint: constraint((T0356)S260.CB, (T0356)G289.CA) [> 4.6957 = 7.8262 < 10.1740] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)H318.CB, (T0356)D454.CB) [> 3.7140 = 6.1900 < 8.0470] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)R144.CB, (T0356)A283.CB) [> 3.8852 = 6.4753 < 8.4179] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)R144.CB, (T0356)Q311.CB) [> 3.8683 = 6.4472 < 8.3813] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)V367.CB, (T0356)K396.CB) [> 2.8822 = 4.8037 < 6.2448] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)V368.CB, (T0356)V385.CB) [> 3.0802 = 5.1337 < 6.6738] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)M382.CB) [> 2.7236 = 4.5394 < 5.9012] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)L365.CB, (T0356)V400.CB) [> 4.4723 = 7.4538 < 9.6900] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)A366.CB, (T0356)C401.CB) [> 2.7963 = 4.6605 < 6.0587] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)A407.CB, (T0356)A455.CB) [> 3.5377 = 5.8961 < 7.6649] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)A378.CB, (T0356)A407.CB) [> 3.7559 = 6.2599 < 8.1379] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)V385.CB) [> 3.4858 = 5.8097 < 7.5527] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)I399.CB) [> 3.9418 = 6.5697 < 8.5406] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)V400.CB) [> 3.4060 = 5.6766 < 7.3796] w=0.0088 to align
# Constraint # added constraint: constraint((T0356)R364.CB, (T0356)C401.CB) [> 4.3285 = 7.2141 < 9.3784] w=0.0088 to align
# SetCost created cost =
# ( 1.0000 * align )
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/constraints_v3/T0356/
# command:# reading script from file servers-clean.under
# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0356/decoys/
# ReadConformPDB reading from PDB file 2nd-chimera-domain-1-and-2-and-3+tag.pdb.gz looking for model 1
# choosing archetypes in rotamer library
# Found a chain break before 496
# copying to AlignedFragments data structure
# ReadConformPDB reading from PDB file 2nd-chimera-domain-1-and-2-and-3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# ReadConformPDB reading from PDB file 2nd-chimera-domain-1-and-2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# ReadConformPDB reading from PDB file 3rd-chimera-domain-1-and-2-and-3+tag.pdb.gz looking for model 1
# Found a chain break before 496
# copying to AlignedFragments data structure
# ReadConformPDB reading from PDB file 3rd-chimera-domain-1-and-2-and-3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# ReadConformPDB reading from PDB file 3rd-chimera-domain-1-and-2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# ReadConformPDB reading from PDB file chimera-domain-1-and-2-and-3-proteinshop+tag.pdb.gz looking for model 1
# Found a chain break before 496
# copying to AlignedFragments data structure
# ReadConformPDB reading from PDB file chimera-domain-1-and-2-and-3-proteinshop.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# ReadConformPDB reading from PDB file chimera-domain-1-and-2-and-3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS1.pdb.gz looking for model 1
# Found a chain break before 494
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_RECOM_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS1.pdb.gz looking for model 1
# Found a chain break before 494
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS5
# ReadConformPDB reading from PDB file servers/3Dpro_TS1.pdb.gz looking for model 1
# Found a chain break before 415
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS1
# ReadConformPDB reading from PDB file servers/3Dpro_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS2
# ReadConformPDB reading from PDB file servers/3Dpro_TS3.pdb.gz looking for model 1
# Found a chain break before 457
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS3
# ReadConformPDB reading from PDB file servers/3Dpro_TS4.pdb.gz looking for model 1
# Found a chain break before 468
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS4
# ReadConformPDB reading from PDB file servers/3Dpro_TS5.pdb.gz looking for model 1
# Found a chain break before 380
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS5
# ReadConformPDB reading from PDB file servers/ABIpro_TS1.pdb.gz looking for model 1
# Found a chain break before 457
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS1
# ReadConformPDB reading from PDB file servers/ABIpro_TS2.pdb.gz looking for model 1
# Found a chain break before 474
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS2
# ReadConformPDB reading from PDB file servers/ABIpro_TS3.pdb.gz looking for model 1
# Found a chain break before 501
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS3
# ReadConformPDB reading from PDB file servers/ABIpro_TS4.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS4
# ReadConformPDB reading from PDB file servers/ABIpro_TS5.pdb.gz looking for model 1
# Found a chain break before 501
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS5
# ReadConformPDB reading from PDB file servers/BayesHH_TS1.pdb.gz looking for model 1
# Found a chain break before 401
# copying to AlignedFragments data structure
# naming current conformation BayesHH_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS1.pdb.gz looking for model 1
# Found a chain break before 504
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS2.pdb.gz looking for model 1
# Found a chain break before 468
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS2
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS3.pdb.gz looking for model 1
# Found a chain break before 468
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS3
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS4.pdb.gz looking for model 1
# Found a chain break before 504
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS4
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS5.pdb.gz looking for model 1
# naming current conformation Bilab-ENABLE_TS5
# ReadConformPDB reading from PDB file servers/CIRCLE_TS1.pdb.gz looking for model 1
# Found a chain break before 485
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS1
# ReadConformPDB reading from PDB file servers/CIRCLE_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS2
# ReadConformPDB reading from PDB file servers/CIRCLE_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS3
# ReadConformPDB reading from PDB file servers/CIRCLE_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS4
# ReadConformPDB reading from PDB file servers/CIRCLE_TS5.pdb.gz looking for model 1
# Found a chain break before 477
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS5
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS1
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS2
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS3
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS4
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS5
# ReadConformPDB reading from PDB file servers/Distill_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Distill_TS1
# ReadConformPDB reading from PDB file servers/Distill_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Distill_TS2
# ReadConformPDB reading from PDB file servers/Distill_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Distill_TS3
# ReadConformPDB reading from PDB file servers/Distill_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Distill_TS4
# ReadConformPDB reading from PDB file servers/Distill_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Distill_TS5
# ReadConformPDB reading from PDB file servers/FAMSD_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS1
# ReadConformPDB reading from PDB file servers/FAMSD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS2
# ReadConformPDB reading from PDB file servers/FAMSD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS3
# ReadConformPDB reading from PDB file servers/FAMSD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS4
# ReadConformPDB reading from PDB file servers/FAMSD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS5
# ReadConformPDB reading from PDB file servers/FAMS_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FAMS_TS1
# ReadConformPDB reading from PDB file servers/FAMS_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FAMS_TS2
# ReadConformPDB reading from PDB file servers/FAMS_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FAMS_TS3
# ReadConformPDB reading from PDB file servers/FAMS_TS4.pdb.gz looking for model 1
# Found a chain break before 485
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS4
# ReadConformPDB reading from PDB file servers/FAMS_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FAMS_TS5
# ReadConformPDB reading from PDB file servers/FOLDpro_TS1.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS1
# ReadConformPDB reading from PDB file servers/FOLDpro_TS2.pdb.gz looking for model 1
# Found a chain break before 376
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS2
# ReadConformPDB reading from PDB file servers/FOLDpro_TS3.pdb.gz looking for model 1
# Found a chain break before 457
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS3
# ReadConformPDB reading from PDB file servers/FOLDpro_TS4.pdb.gz looking for model 1
# Found a chain break before 422
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS4
# ReadConformPDB reading from PDB file servers/FOLDpro_TS5.pdb.gz looking for model 1
# Found a chain break before 473
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS5
# ReadConformPDB reading from PDB file servers/FORTE1_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL1
# ReadConformPDB reading from PDB file servers/FORTE1_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL2
# ReadConformPDB reading from PDB file servers/FORTE1_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL3
# ReadConformPDB reading from PDB file servers/FORTE1_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL4
# ReadConformPDB reading from PDB file servers/FORTE1_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL5
# ReadConformPDB reading from PDB file servers/FORTE2_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL1
# ReadConformPDB reading from PDB file servers/FORTE2_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL2
# ReadConformPDB reading from PDB file servers/FORTE2_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL3
# ReadConformPDB reading from PDB file servers/FORTE2_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL4
# ReadConformPDB reading from PDB file servers/FORTE2_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL5
# ReadConformPDB reading from PDB file servers/FUGUE_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL1
# ReadConformPDB reading from PDB file servers/FUGUE_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL2
# ReadConformPDB reading from PDB file servers/FUGUE_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL3
# ReadConformPDB reading from PDB file servers/FUGUE_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL4
# ReadConformPDB reading from PDB file servers/FUGUE_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL5
# ReadConformPDB reading from PDB file servers/FUNCTION_TS1.pdb.gz looking for model 1
# Found a chain break before 504
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS1
# ReadConformPDB reading from PDB file servers/FUNCTION_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS2
# ReadConformPDB reading from PDB file servers/FUNCTION_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FUNCTION_TS3
# ReadConformPDB reading from PDB file servers/FUNCTION_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FUNCTION_TS4
# ReadConformPDB reading from PDB file servers/FUNCTION_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation FUNCTION_TS5
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation GeneSilicoMetaServer_TS1
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation GeneSilicoMetaServer_TS2
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS3.pdb.gz looking for model 1
# Found a chain break before 499
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS3
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS4.pdb.gz looking for model 1
# Found a chain break before 447
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS4
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation GeneSilicoMetaServer_TS5
# ReadConformPDB reading from PDB file servers/HHpred1_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation HHpred1_TS1
# ReadConformPDB reading from PDB file servers/HHpred2_TS1.pdb.gz looking for model 1
WARNING: atom 1 has residue number 1 < previous residue 491 in servers/HHpred2_TS1.pdb.gz
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation HHpred2_TS1
# ReadConformPDB reading from PDB file servers/HHpred3_TS1.pdb.gz looking for model 1
WARNING: atom 1 has residue number 1 < previous residue 499 in servers/HHpred3_TS1.pdb.gz
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation HHpred3_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS2
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS3
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS4
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS5
# ReadConformPDB reading from PDB file servers/LOOPP_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS1
# ReadConformPDB reading from PDB file servers/LOOPP_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS2
# ReadConformPDB reading from PDB file servers/LOOPP_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS3
# ReadConformPDB reading from PDB file servers/LOOPP_TS4.pdb.gz looking for model 1
# Found a chain break before 460
# copying to AlignedFragments data structure
# naming current conformation LOOPP_TS4
# ReadConformPDB reading from PDB file servers/LOOPP_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS5
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Ma-OPUS-server2_TS1
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Ma-OPUS-server2_TS2
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Ma-OPUS-server2_TS3
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Ma-OPUS-server2_TS4
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Ma-OPUS-server2_TS5
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Ma-OPUS-server_TS1
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Ma-OPUS-server_TS2
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Ma-OPUS-server_TS3
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Ma-OPUS-server_TS4
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Ma-OPUS-server_TS5
# ReadConformPDB reading from PDB file servers/MetaTasser_TS1.pdb.gz looking for model 1
# Found a chain break before 504
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS1
# ReadConformPDB reading from PDB file servers/MetaTasser_TS2.pdb.gz looking for model 1
# Found a chain break before 502
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS2
# ReadConformPDB reading from PDB file servers/MetaTasser_TS3.pdb.gz looking for model 1
# Found a chain break before 504
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS3
# ReadConformPDB reading from PDB file servers/MetaTasser_TS4.pdb.gz looking for model 1
# Found a chain break before 503
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS4
# ReadConformPDB reading from PDB file servers/MetaTasser_TS5.pdb.gz looking for model 1
# Found a chain break before 502
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS5
# ReadConformPDB reading from PDB file servers/NN_PUT_lab_TS1.pdb.gz looking for model 1
# Found a chain break before 301
# copying to AlignedFragments data structure
# naming current conformation NN_PUT_lab_TS1
# ReadConformPDB reading from PDB file servers/POMYSL_TS1.pdb.gz looking for model 1
# Found a chain break before 469
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS1
# ReadConformPDB reading from PDB file servers/POMYSL_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation POMYSL_TS2
# ReadConformPDB reading from PDB file servers/POMYSL_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation POMYSL_TS3
# ReadConformPDB reading from PDB file servers/POMYSL_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation POMYSL_TS4
# ReadConformPDB reading from PDB file servers/POMYSL_TS5.pdb.gz looking for model 1
# Found a chain break before 474
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS5
# ReadConformPDB reading from PDB file servers/PROTINFO_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation PROTINFO_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation PROTINFO_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation PROTINFO_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation PROTINFO_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation PROTINFO_TS5
# ReadConformPDB reading from PDB file servers/Pcons6_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS1
# ReadConformPDB reading from PDB file servers/Pcons6_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS2
# ReadConformPDB reading from PDB file servers/Pcons6_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS3
# ReadConformPDB reading from PDB file servers/Pcons6_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS4
# ReadConformPDB reading from PDB file servers/Pcons6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS5
# ReadConformPDB reading from PDB file servers/Phyre-1_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Phyre-1_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS2
# ReadConformPDB reading from PDB file servers/Phyre-2_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS3
# ReadConformPDB reading from PDB file servers/Phyre-2_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS4
# ReadConformPDB reading from PDB file servers/Phyre-2_TS5.pdb.gz looking for model 1
# Found a chain break before 504
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS5
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS1
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS2
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS3
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS4
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS1.pdb.gz looking for model 1
# Found a chain break before 498
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS2.pdb.gz looking for model 1
# Found a chain break before 498
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS3.pdb.gz looking for model 1
# Found a chain break before 427
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS4.pdb.gz looking for model 1
# Found a chain break before 472
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS5.pdb.gz looking for model 1
# Found a chain break before 466
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS5
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS1.pdb.gz looking for model 1
# Found a chain break before 433
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS1
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS2.pdb.gz looking for model 1
# Found a chain break before 495
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS2
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS3.pdb.gz looking for model 1
# Found a chain break before 442
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS3
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS4.pdb.gz looking for model 1
# Found a chain break before 469
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS4
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS5.pdb.gz looking for model 1
# Found a chain break before 498
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR_TS1.pdb.gz looking for model 1
# Found a chain break before 394
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR_TS2.pdb.gz looking for model 1
# Found a chain break before 488
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR_TS3.pdb.gz looking for model 1
# Found a chain break before 447
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR_TS4.pdb.gz looking for model 1
# Found a chain break before 497
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR_TS5.pdb.gz looking for model 1
# Found a chain break before 390
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS5
# ReadConformPDB reading from PDB file servers/ROBETTA_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation ROBETTA_TS1
# ReadConformPDB reading from PDB file servers/ROBETTA_TS2.pdb.gz looking for model 1
# Found a chain break before 323
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS2
# ReadConformPDB reading from PDB file servers/ROBETTA_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation ROBETTA_TS3
# ReadConformPDB reading from PDB file servers/ROBETTA_TS4.pdb.gz looking for model 1
# Found a chain break before 323
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS4
# ReadConformPDB reading from PDB file servers/ROBETTA_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation ROBETTA_TS5
# ReadConformPDB reading from PDB file servers/ROKKY_TS1.pdb.gz looking for model 1
WARNING: atoms too close: (T0356)M4.CA and (T0356)M4.CB only 0 apart, marking (T0356)M4.CB as missing
WARNING: atoms too close: (T0356)N7.CA and (T0356)N7.CB only 0 apart, marking (T0356)N7.CB as missing
WARNING: atoms too close: (T0356)D11.CA and (T0356)D11.CB only 0 apart, marking (T0356)D11.CB as missing
WARNING: atoms too close: (T0356)L13.CA and (T0356)L13.CB only 0 apart, marking (T0356)L13.CB as missing
WARNING: atoms too close: (T0356)L22.CA and (T0356)L22.CB only 0 apart, marking (T0356)L22.CB as missing
WARNING: atoms too close: (T0356)V29.CA and (T0356)V29.CB only 0 apart, marking (T0356)V29.CB as missing
WARNING: atoms too close: (T0356)I35.CA and (T0356)I35.CB only 0 apart, marking (T0356)I35.CB as missing
WARNING: atoms too close: (T0356)T36.CA and (T0356)T36.CB only 0 apart, marking (T0356)T36.CB as missing
WARNING: atoms too close: (T0356)E53.CA and (T0356)E53.CB only 0 apart, marking (T0356)E53.CB as missing
WARNING: atoms too close: (T0356)L63.CA and (T0356)L63.CB only 0 apart, marking (T0356)L63.CB as missing
WARNING: atoms too close: (T0356)F67.CA and (T0356)F67.CB only 0 apart, marking (T0356)F67.CB as missing
WARNING: atoms too close: (T0356)T69.CA and (T0356)T69.CB only 0 apart, marking (T0356)T69.CB as missing
WARNING: atoms too close: (T0356)K71.CA and (T0356)K71.CB only 0 apart, marking (T0356)K71.CB as missing
WARNING: atoms too close: (T0356)Q79.CA and (T0356)Q79.CB only 0 apart, marking (T0356)Q79.CB as missing
WARNING: atoms too close: (T0356)E80.CA and (T0356)E80.CB only 0 apart, marking (T0356)E80.CB as missing
WARNING: atoms too close: (T0356)A84.CA and (T0356)A84.CB only 0 apart, marking (T0356)A84.CB as missing
WARNING: atoms too close: (T0356)K90.CA and (T0356)K90.CB only 0 apart, marking (T0356)K90.CB as missing
WARNING: atoms too close: (T0356)L92.CA and (T0356)L92.CB only 0 apart, marking (T0356)L92.CB as missing
WARNING: atoms too close: (T0356)E97.CA and (T0356)E97.CB only 0 apart, marking (T0356)E97.CB as missing
WARNING: atoms too close: (T0356)F108.CA and (T0356)F108.CB only 0 apart, marking (T0356)F108.CB as missing
WARNING: atoms too close: (T0356)Q113.CA and (T0356)Q113.CB only 0 apart, marking (T0356)Q113.CB as missing
WARNING: atoms too close: (T0356)F114.CA and (T0356)F114.CB only 0 apart, marking (T0356)F114.CB as missing
WARNING: atoms too close: (T0356)L125.CA and (T0356)L125.CB only 0 apart, marking (T0356)L125.CB as missing
WARNING: atoms too close: (T0356)Q131.CA and (T0356)Q131.CB only 0 apart, marking (T0356)Q131.CB as missing
WARNING: atoms too close: (T0356)V135.CA and (T0356)V135.CB only 0 apart, marking (T0356)V135.CB as missing
WARNING: atoms too close: (T0356)D141.CA and (T0356)D141.CB only 0 apart, marking (T0356)D141.CB as missing
WARNING: atoms too close: (T0356)I147.CA and (T0356)I147.CB only 0 apart, marking (T0356)I147.CB as missing
WARNING: atoms too close: (T0356)W151.CA and (T0356)W151.CB only 0 apart, marking (T0356)W151.CB as missing
WARNING: atoms too close: (T0356)L158.CA and (T0356)L158.CB only 0 apart, marking (T0356)L158.CB as missing
WARNING: atoms too close: (T0356)T160.CA and (T0356)T160.CB only 0 apart, marking (T0356)T160.CB as missing
WARNING: atoms too close: (T0356)K171.CA and (T0356)K171.CB only 0 apart, marking (T0356)K171.CB as missing
WARNING: atoms too close: (T0356)L189.CA and (T0356)L189.CB only 0 apart, marking (T0356)L189.CB as missing
WARNING: atoms too close: (T0356)I190.CA and (T0356)I190.CB only 0 apart, marking (T0356)I190.CB as missing
WARNING: atoms too close: (T0356)W193.CA and (T0356)W193.CB only 0 apart, marking (T0356)W193.CB as missing
WARNING: atoms too close: (T0356)V219.CA and (T0356)V219.CB only 0 apart, marking (T0356)V219.CB as missing
WARNING: atoms too close: (T0356)L229.CA and (T0356)L229.CB only 0 apart, marking (T0356)L229.CB as missing
WARNING: atoms too close: (T0356)P234.CA and (T0356)P234.CB only 0 apart, marking (T0356)P234.CB as missing
WARNING: atoms too close: (T0356)L239.CA and (T0356)L239.CB only 0 apart, marking (T0356)L239.CB as missing
WARNING: atoms too close: (T0356)L247.CA and (T0356)L247.CB only 0 apart, marking (T0356)L247.CB as missing
WARNING: atoms too close: (T0356)R249.CA and (T0356)R249.CB only 0 apart, marking (T0356)R249.CB as missing
WARNING: atoms too close: (T0356)T251.CA and (T0356)T251.CB only 0 apart, marking (T0356)T251.CB as missing
WARNING: atoms too close: (T0356)K252.CA and (T0356)K252.CB only 0 apart, marking (T0356)K252.CB as missing
WARNING: atoms too close: (T0356)V255.CA and (T0356)V255.CB only 0 apart, marking (T0356)V255.CB as missing
WARNING: atoms too close: (T0356)K257.CA and (T0356)K257.CB only 0 apart, marking (T0356)K257.CB as missing
WARNING: atoms too close: (T0356)I259.CA and (T0356)I259.CB only 0 apart, marking (T0356)I259.CB as missing
WARNING: atoms too close: (T0356)L263.CA and (T0356)L263.CB only 0 apart, marking (T0356)L263.CB as missing
WARNING: atoms too close: (T0356)V265.CA and (T0356)V265.CB only 0 apart, marking (T0356)V265.CB as missing
WARNING: atoms too close: (T0356)P266.CA and (T0356)P266.CB only 0 apart, marking (T0356)P266.CB as missing
WARNING: atoms too close: (T0356)E274.CA and (T0356)E274.CB only 0 apart, marking (T0356)E274.CB as missing
WARNING: atoms too close: (T0356)E281.CA and (T0356)E281.CB only 0 apart, marking (T0356)E281.CB as missing
WARNING: atoms too close: (T0356)Y295.CA and (T0356)Y295.CB only 0 apart, marking (T0356)Y295.CB as missing
WARNING: atoms too close: (T0356)P302.CA and (T0356)P302.CB only 0 apart, marking (T0356)P302.CB as missing
WARNING: atoms too close: (T0356)P325.CA and (T0356)P325.CB only 0 apart, marking (T0356)P325.CB as missing
WARNING: atoms too close: (T0356)D327.CA and (T0356)D327.CB only 0 apart, marking (T0356)D327.CB as missing
WARNING: atoms too close: (T0356)E328.CA and (T0356)E328.CB only 0 apart, marking (T0356)E328.CB as missing
WARNING: atoms too close: (T0356)L336.CA and (T0356)L336.CB only 0 apart, marking (T0356)L336.CB as missing
WARNING: atoms too close: (T0356)P342.CA and (T0356)P342.CB only 0 apart, marking (T0356)P342.CB as missing
WARNING: atoms too close: (T0356)I343.CA and (T0356)I343.CB only 0 apart, marking (T0356)I343.CB as missing
WARNING: atoms too close: (T0356)Q347.CA and (T0356)Q347.CB only 0 apart, marking (T0356)Q347.CB as missing
WARNING: atoms too close: (T0356)F348.CA and (T0356)F348.CB only 0 apart, marking (T0356)F348.CB as missing
WARNING: atoms too close: (T0356)I351.CA and (T0356)I351.CB only 0 apart, marking (T0356)I351.CB as missing
WARNING: atoms too close: (T0356)P357.CA and (T0356)P357.CB only 0 apart, marking (T0356)P357.CB as missing
WARNING: atoms too close: (T0356)R364.CA and (T0356)R364.CB only 0 apart, marking (T0356)R364.CB as missing
WARNING: atoms too close: (T0356)L365.CA and (T0356)L365.CB only 0 apart, marking (T0356)L365.CB as missing
WARNING: atoms too close: (T0356)K372.CA and (T0356)K372.CB only 0 apart, marking (T0356)K372.CB as missing
WARNING: atoms too close: (T0356)Q373.CA and (T0356)Q373.CB only 0 apart, marking (T0356)Q373.CB as missing
WARNING: atoms too close: (T0356)A375.CA and (T0356)A375.CB only 0 apart, marking (T0356)A375.CB as missing
WARNING: atoms too close: (T0356)A378.CA and (T0356)A378.CB only 0 apart, marking (T0356)A378.CB as missing
WARNING: atoms too close: (T0356)V381.CA and (T0356)V381.CB only 0 apart, marking (T0356)V381.CB as missing
WARNING: atoms too close: (T0356)M383.CA and (T0356)M383.CB only 0 apart, marking (T0356)M383.CB as missing
WARNING: atoms too close: (T0356)V400.CA and (T0356)V400.CB only 0 apart, marking (T0356)V400.CB as missing
WARNING: atoms too close: (T0356)R408.CA and (T0356)R408.CB only 0 apart, marking (T0356)R408.CB as missing
WARNING: atoms too close: (T0356)D409.CA and (T0356)D409.CB only 0 apart, marking (T0356)D409.CB as missing
WARNING: atoms too close: (T0356)W410.CA and (T0356)W410.CB only 0 apart, marking (T0356)W410.CB as missing
WARNING: atoms too close: (T0356)D426.CA and (T0356)D426.CB only 0 apart, marking (T0356)D426.CB as missing
WARNING: atoms too close: (T0356)T427.CA and (T0356)T427.CB only 0 apart, marking (T0356)T427.CB as missing
WARNING: atoms too close: (T0356)D436.CA and (T0356)D436.CB only 0 apart, marking (T0356)D436.CB as missing
WARNING: atoms too close: (T0356)Y437.CA and (T0356)Y437.CB only 0 apart, marking (T0356)Y437.CB as missing
WARNING: atoms too close: (T0356)S445.CA and (T0356)S445.CB only 0 apart, marking (T0356)S445.CB as missing
WARNING: atoms too close: (T0356)K450.CA and (T0356)K450.CB only 0 apart, marking (T0356)K450.CB as missing
WARNING: atoms too close: (T0356)W459.CA and (T0356)W459.CB only 0 apart, marking (T0356)W459.CB as missing
WARNING: atoms too close: (T0356)E466.CA and (T0356)E466.CB only 0 apart, marking (T0356)E466.CB as missing
WARNING: atoms too close: (T0356)W467.CA and (T0356)W467.CB only 0 apart, marking (T0356)W467.CB as missing
WARNING: atoms too close: (T0356)P470.CA and (T0356)P470.CB only 0 apart, marking (T0356)P470.CB as missing
WARNING: atoms too close: (T0356)K473.CA and (T0356)K473.CB only 0 apart, marking (T0356)K473.CB as missing
WARNING: atoms too close: (T0356)D476.CA and (T0356)D476.CB only 0 apart, marking (T0356)D476.CB as missing
WARNING: atoms too close: (T0356)V478.CA and (T0356)V478.CB only 0 apart, marking (T0356)V478.CB as missing
WARNING: atoms too close: (T0356)A479.CA and (T0356)A479.CB only 0 apart, marking (T0356)A479.CB as missing
WARNING: atoms too close: (T0356)W485.CA and (T0356)W485.CB only 0 apart, marking (T0356)W485.CB as missing
WARNING: atoms too close: (T0356)A497.CA and (T0356)A497.CB only 0 apart, marking (T0356)A497.CB as missing
WARNING: atoms too close: (T0356)E499.CA and (T0356)E499.CB only 0 apart, marking (T0356)E499.CB as missing
WARNING: atoms too close: (T0356)H505.CA and (T0356)H505.CB only 0 apart, marking (T0356)H505.CB as missing
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS1
# ReadConformPDB reading from PDB file servers/ROKKY_TS2.pdb.gz looking for model 1
WARNING: atoms too close: (T0356)D8.CA and (T0356)D8.CB only 0 apart, marking (T0356)D8.CB as missing
WARNING: atoms too close: (T0356)K23.CA and (T0356)K23.CB only 0 apart, marking (T0356)K23.CB as missing
WARNING: atoms too close: (T0356)R24.CA and (T0356)R24.CB only 0 apart, marking (T0356)R24.CB as missing
WARNING: atoms too close: (T0356)L27.CA and (T0356)L27.CB only 0 apart, marking (T0356)L27.CB as missing
WARNING: atoms too close: (T0356)V29.CA and (T0356)V29.CB only 0 apart, marking (T0356)V29.CB as missing
WARNING: atoms too close: (T0356)D30.CA and (T0356)D30.CB only 0 apart, marking (T0356)D30.CB as missing
WARNING: atoms too close: (T0356)L51.CA and (T0356)L51.CB only 0 apart, marking (T0356)L51.CB as missing
WARNING: atoms too close: (T0356)K56.CA and (T0356)K56.CB only 0 apart, marking (T0356)K56.CB as missing
WARNING: atoms too close: (T0356)K71.CA and (T0356)K71.CB only 0 apart, marking (T0356)K71.CB as missing
WARNING: atoms too close: (T0356)V73.CA and (T0356)V73.CB only 0 apart, marking (T0356)V73.CB as missing
WARNING: atoms too close: (T0356)M77.CA and (T0356)M77.CB only 0 apart, marking (T0356)M77.CB as missing
WARNING: atoms too close: (T0356)K90.CA and (T0356)K90.CB only 0 apart, marking (T0356)K90.CB as missing
WARNING: atoms too close: (T0356)A93.CA and (T0356)A93.CB only 0 apart, marking (T0356)A93.CB as missing
WARNING: atoms too close: (T0356)E99.CA and (T0356)E99.CB only 0 apart, marking (T0356)E99.CB as missing
WARNING: atoms too close: (T0356)Q113.CA and (T0356)Q113.CB only 0 apart, marking (T0356)Q113.CB as missing
WARNING: atoms too close: (T0356)S136.CA and (T0356)S136.CB only 0 apart, marking (T0356)S136.CB as missing
WARNING: atoms too close: (T0356)D139.CA and (T0356)D139.CB only 0 apart, marking (T0356)D139.CB as missing
WARNING: atoms too close: (T0356)I145.CA and (T0356)I145.CB only 0 apart, marking (T0356)I145.CB as missing
WARNING: atoms too close: (T0356)T149.CA and (T0356)T149.CB only 0 apart, marking (T0356)T149.CB as missing
WARNING: atoms too close: (T0356)P152.CA and (T0356)P152.CB only 0 apart, marking (T0356)P152.CB as missing
WARNING: atoms too close: (T0356)L158.CA and (T0356)L158.CB only 0 apart, marking (T0356)L158.CB as missing
WARNING: atoms too close: (T0356)I159.CA and (T0356)I159.CB only 0 apart, marking (T0356)I159.CB as missing
WARNING: atoms too close: (T0356)L163.CA and (T0356)L163.CB only 0 apart, marking (T0356)L163.CB as missing
WARNING: atoms too close: (T0356)T164.CA and (T0356)T164.CB only 0 apart, marking (T0356)T164.CB as missing
WARNING: atoms too close: (T0356)Q174.CA and (T0356)Q174.CB only 0 apart, marking (T0356)Q174.CB as missing
WARNING: atoms too close: (T0356)Y179.CA and (T0356)Y179.CB only 0 apart, marking (T0356)Y179.CB as missing
WARNING: atoms too close: (T0356)L189.CA and (T0356)L189.CB only 0 apart, marking (T0356)L189.CB as missing
WARNING: atoms too close: (T0356)I190.CA and (T0356)I190.CB only 0 apart, marking (T0356)I190.CB as missing
WARNING: atoms too close: (T0356)R192.CA and (T0356)R192.CB only 0 apart, marking (T0356)R192.CB as missing
WARNING: atoms too close: (T0356)R197.CA and (T0356)R197.CB only 0 apart, marking (T0356)R197.CB as missing
WARNING: atoms too close: (T0356)W206.CA and (T0356)W206.CB only 0 apart, marking (T0356)W206.CB as missing
WARNING: atoms too close: (T0356)A209.CA and (T0356)A209.CB only 0 apart, marking (T0356)A209.CB as missing
WARNING: atoms too close: (T0356)A231.CA and (T0356)A231.CB only 0 apart, marking (T0356)A231.CB as missing
WARNING: atoms too close: (T0356)V235.CA and (T0356)V235.CB only 0 apart, marking (T0356)V235.CB as missing
WARNING: atoms too close: (T0356)K252.CA and (T0356)K252.CB only 0 apart, marking (T0356)K252.CB as missing
WARNING: atoms too close: (T0356)L263.CA and (T0356)L263.CB only 0 apart, marking (T0356)L263.CB as missing
WARNING: atoms too close: (T0356)I277.CA and (T0356)I277.CB only 0 apart, marking (T0356)I277.CB as missing
WARNING: atoms too close: (T0356)Q279.CA and (T0356)Q279.CB only 0 apart, marking (T0356)Q279.CB as missing
WARNING: atoms too close: (T0356)T282.CA and (T0356)T282.CB only 0 apart, marking (T0356)T282.CB as missing
WARNING: atoms too close: (T0356)P287.CA and (T0356)P287.CB only 0 apart, marking (T0356)P287.CB as missing
WARNING: atoms too close: (T0356)D290.CA and (T0356)D290.CB only 0 apart, marking (T0356)D290.CB as missing
WARNING: atoms too close: (T0356)Y295.CA and (T0356)Y295.CB only 0 apart, marking (T0356)Y295.CB as missing
WARNING: atoms too close: (T0356)E297.CA and (T0356)E297.CB only 0 apart, marking (T0356)E297.CB as missing
WARNING: atoms too close: (T0356)S300.CA and (T0356)S300.CB only 0 apart, marking (T0356)S300.CB as missing
WARNING: atoms too close: (T0356)V303.CA and (T0356)V303.CB only 0 apart, marking (T0356)V303.CB as missing
WARNING: atoms too close: (T0356)T307.CA and (T0356)T307.CB only 0 apart, marking (T0356)T307.CB as missing
WARNING: atoms too close: (T0356)H308.CA and (T0356)H308.CB only 0 apart, marking (T0356)H308.CB as missing
WARNING: atoms too close: (T0356)T310.CA and (T0356)T310.CB only 0 apart, marking (T0356)T310.CB as missing
WARNING: atoms too close: (T0356)E313.CA and (T0356)E313.CB only 0 apart, marking (T0356)E313.CB as missing
WARNING: atoms too close: (T0356)Y317.CA and (T0356)Y317.CB only 0 apart, marking (T0356)Y317.CB as missing
WARNING: atoms too close: (T0356)S319.CA and (T0356)S319.CB only 0 apart, marking (T0356)S319.CB as missing
WARNING: atoms too close: (T0356)P342.CA and (T0356)P342.CB only 0 apart, marking (T0356)P342.CB as missing
WARNING: atoms too close: (T0356)I351.CA and (T0356)I351.CB only 0 apart, marking (T0356)I351.CB as missing
WARNING: atoms too close: (T0356)P357.CA and (T0356)P357.CB only 0 apart, marking (T0356)P357.CB as missing
WARNING: atoms too close: (T0356)S362.CA and (T0356)S362.CB only 0 apart, marking (T0356)S362.CB as missing
WARNING: atoms too close: (T0356)R364.CA and (T0356)R364.CB only 0 apart, marking (T0356)R364.CB as missing
WARNING: atoms too close: (T0356)L365.CA and (T0356)L365.CB only 0 apart, marking (T0356)L365.CB as missing
WARNING: atoms too close: (T0356)A378.CA and (T0356)A378.CB only 0 apart, marking (T0356)A378.CB as missing
WARNING: atoms too close: (T0356)L389.CA and (T0356)L389.CB only 0 apart, marking (T0356)L389.CB as missing
WARNING: atoms too close: (T0356)Q391.CA and (T0356)Q391.CB only 0 apart, marking (T0356)Q391.CB as missing
WARNING: atoms too close: (T0356)K396.CA and (T0356)K396.CB only 0 apart, marking (T0356)K396.CB as missing
WARNING: atoms too close: (T0356)I399.CA and (T0356)I399.CB only 0 apart, marking (T0356)I399.CB as missing
WARNING: atoms too close: (T0356)V400.CA and (T0356)V400.CB only 0 apart, marking (T0356)V400.CB as missing
WARNING: atoms too close: (T0356)D402.CA and (T0356)D402.CB only 0 apart, marking (T0356)D402.CB as missing
WARNING: atoms too close: (T0356)D403.CA and (T0356)D403.CB only 0 apart, marking (T0356)D403.CB as missing
WARNING: atoms too close: (T0356)A407.CA and (T0356)A407.CB only 0 apart, marking (T0356)A407.CB as missing
WARNING: atoms too close: (T0356)R420.CA and (T0356)R420.CB only 0 apart, marking (T0356)R420.CB as missing
WARNING: atoms too close: (T0356)A424.CA and (T0356)A424.CB only 0 apart, marking (T0356)A424.CB as missing
WARNING: atoms too close: (T0356)T427.CA and (T0356)T427.CB only 0 apart, marking (T0356)T427.CB as missing
WARNING: atoms too close: (T0356)A441.CA and (T0356)A441.CB only 0 apart, marking (T0356)A441.CB as missing
WARNING: atoms too close: (T0356)S445.CA and (T0356)S445.CB only 0 apart, marking (T0356)S445.CB as missing
WARNING: atoms too close: (T0356)L447.CA and (T0356)L447.CB only 0 apart, marking (T0356)L447.CB as missing
WARNING: atoms too close: (T0356)E466.CA and (T0356)E466.CB only 0 apart, marking (T0356)E466.CB as missing
WARNING: atoms too close: (T0356)P470.CA and (T0356)P470.CB only 0 apart, marking (T0356)P470.CB as missing
WARNING: atoms too close: (T0356)I471.CA and (T0356)I471.CB only 0 apart, marking (T0356)I471.CB as missing
WARNING: atoms too close: (T0356)D476.CA and (T0356)D476.CB only 0 apart, marking (T0356)D476.CB as missing
WARNING: atoms too close: (T0356)A479.CA and (T0356)A479.CB only 0 apart, marking (T0356)A479.CB as missing
WARNING: atoms too close: (T0356)W485.CA and (T0356)W485.CB only 0 apart, marking (T0356)W485.CB as missing
WARNING: atoms too close: (T0356)D486.CA and (T0356)D486.CB only 0 apart, marking (T0356)D486.CB as missing
WARNING: atoms too close: (T0356)N492.CA and (T0356)N492.CB only 0 apart, marking (T0356)N492.CB as missing
WARNING: atoms too close: (T0356)E499.CA and (T0356)E499.CB only 0 apart, marking (T0356)E499.CB as missing
WARNING: atoms too close: (T0356)H501.CA and (T0356)H501.CB only 0 apart, marking (T0356)H501.CB as missing
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS2
# ReadConformPDB reading from PDB file servers/ROKKY_TS3.pdb.gz looking for model 1
WARNING: atoms too close: (T0356)M1.CA and (T0356)M1.CB only 0 apart, marking (T0356)M1.CB as missing
WARNING: atoms too close: (T0356)A3.CA and (T0356)A3.CB only 0 apart, marking (T0356)A3.CB as missing
WARNING: atoms too close: (T0356)Y6.CA and (T0356)Y6.CB only 0 apart, marking (T0356)Y6.CB as missing
WARNING: atoms too close: (T0356)D11.CA and (T0356)D11.CB only 0 apart, marking (T0356)D11.CB as missing
WARNING: atoms too close: (T0356)L13.CA and (T0356)L13.CB only 0 apart, marking (T0356)L13.CB as missing
WARNING: atoms too close: (T0356)T26.CA and (T0356)T26.CB only 0 apart, marking (T0356)T26.CB as missing
WARNING: atoms too close: (T0356)P31.CA and (T0356)P31.CB only 0 apart, marking (T0356)P31.CB as missing
WARNING: atoms too close: (T0356)I38.CA and (T0356)I38.CB only 0 apart, marking (T0356)I38.CB as missing
WARNING: atoms too close: (T0356)A49.CA and (T0356)A49.CB only 0 apart, marking (T0356)A49.CB as missing
WARNING: atoms too close: (T0356)L51.CA and (T0356)L51.CB only 0 apart, marking (T0356)L51.CB as missing
WARNING: atoms too close: (T0356)C64.CA and (T0356)C64.CB only 0 apart, marking (T0356)C64.CB as missing
WARNING: atoms too close: (T0356)K71.CA and (T0356)K71.CB only 0 apart, marking (T0356)K71.CB as missing
WARNING: atoms too close: (T0356)K90.CA and (T0356)K90.CB only 0 apart, marking (T0356)K90.CB as missing
WARNING: atoms too close: (T0356)K96.CA and (T0356)K96.CB only 0 apart, marking (T0356)K96.CB as missing
WARNING: atoms too close: (T0356)R124.CA and (T0356)R124.CB only 0 apart, marking (T0356)R124.CB as missing
WARNING: atoms too close: (T0356)C130.CA and (T0356)C130.CB only 0 apart, marking (T0356)C130.CB as missing
WARNING: atoms too close: (T0356)Q131.CA and (T0356)Q131.CB only 0 apart, marking (T0356)Q131.CB as missing
WARNING: atoms too close: (T0356)I147.CA and (T0356)I147.CB only 0 apart, marking (T0356)I147.CB as missing
WARNING: atoms too close: (T0356)D154.CA and (T0356)D154.CB only 0 apart, marking (T0356)D154.CB as missing
WARNING: atoms too close: (T0356)A155.CA and (T0356)A155.CB only 0 apart, marking (T0356)A155.CB as missing
WARNING: atoms too close: (T0356)T164.CA and (T0356)T164.CB only 0 apart, marking (T0356)T164.CB as missing
WARNING: atoms too close: (T0356)P169.CA and (T0356)P169.CB only 0 apart, marking (T0356)P169.CB as missing
WARNING: atoms too close: (T0356)Q174.CA and (T0356)Q174.CB only 0 apart, marking (T0356)Q174.CB as missing
WARNING: atoms too close: (T0356)I178.CA and (T0356)I178.CB only 0 apart, marking (T0356)I178.CB as missing
WARNING: atoms too close: (T0356)Q182.CA and (T0356)Q182.CB only 0 apart, marking (T0356)Q182.CB as missing
WARNING: atoms too close: (T0356)L183.CA and (T0356)L183.CB only 0 apart, marking (T0356)L183.CB as missing
WARNING: atoms too close: (T0356)I184.CA and (T0356)I184.CB only 0 apart, marking (T0356)I184.CB as missing
WARNING: atoms too close: (T0356)L189.CA and (T0356)L189.CB only 0 apart, marking (T0356)L189.CB as missing
WARNING: atoms too close: (T0356)R192.CA and (T0356)R192.CB only 0 apart, marking (T0356)R192.CB as missing
WARNING: atoms too close: (T0356)W193.CA and (T0356)W193.CB only 0 apart, marking (T0356)W193.CB as missing
WARNING: atoms too close: (T0356)A200.CA and (T0356)A200.CB only 0 apart, marking (T0356)A200.CB as missing
WARNING: atoms too close: (T0356)C207.CA and (T0356)C207.CB only 0 apart, marking (T0356)C207.CB as missing
WARNING: atoms too close: (T0356)P234.CA and (T0356)P234.CB only 0 apart, marking (T0356)P234.CB as missing
WARNING: atoms too close: (T0356)V235.CA and (T0356)V235.CB only 0 apart, marking (T0356)V235.CB as missing
WARNING: atoms too close: (T0356)A245.CA and (T0356)A245.CB only 0 apart, marking (T0356)A245.CB as missing
WARNING: atoms too close: (T0356)K252.CA and (T0356)K252.CB only 0 apart, marking (T0356)K252.CB as missing
WARNING: atoms too close: (T0356)E254.CA and (T0356)E254.CB only 0 apart, marking (T0356)E254.CB as missing
WARNING: atoms too close: (T0356)D262.CA and (T0356)D262.CB only 0 apart, marking (T0356)D262.CB as missing
WARNING: atoms too close: (T0356)V265.CA and (T0356)V265.CB only 0 apart, marking (T0356)V265.CB as missing
WARNING: atoms too close: (T0356)L273.CA and (T0356)L273.CB only 0 apart, marking (T0356)L273.CB as missing
WARNING: atoms too close: (T0356)Y276.CA and (T0356)Y276.CB only 0 apart, marking (T0356)Y276.CB as missing
WARNING: atoms too close: (T0356)E278.CA and (T0356)E278.CB only 0 apart, marking (T0356)E278.CB as missing
WARNING: atoms too close: (T0356)Q279.CA and (T0356)Q279.CB only 0 apart, marking (T0356)Q279.CB as missing
WARNING: atoms too close: (T0356)T282.CA and (T0356)T282.CB only 0 apart, marking (T0356)T282.CB as missing
WARNING: atoms too close: (T0356)T292.CA and (T0356)T292.CB only 0 apart, marking (T0356)T292.CB as missing
WARNING: atoms too close: (T0356)Y295.CA and (T0356)Y295.CB only 0 apart, marking (T0356)Y295.CB as missing
WARNING: atoms too close: (T0356)D299.CA and (T0356)D299.CB only 0 apart, marking (T0356)D299.CB as missing
WARNING: atoms too close: (T0356)R312.CA and (T0356)R312.CB only 0 apart, marking (T0356)R312.CB as missing
WARNING: atoms too close: (T0356)I316.CA and (T0356)I316.CB only 0 apart, marking (T0356)I316.CB as missing
WARNING: atoms too close: (T0356)Y317.CA and (T0356)Y317.CB only 0 apart, marking (T0356)Y317.CB as missing
WARNING: atoms too close: (T0356)H318.CA and (T0356)H318.CB only 0 apart, marking (T0356)H318.CB as missing
WARNING: atoms too close: (T0356)N337.CA and (T0356)N337.CB only 0 apart, marking (T0356)N337.CB as missing
WARNING: atoms too close: (T0356)Q347.CA and (T0356)Q347.CB only 0 apart, marking (T0356)Q347.CB as missing
WARNING: atoms too close: (T0356)P358.CA and (T0356)P358.CB only 0 apart, marking (T0356)P358.CB as missing
WARNING: atoms too close: (T0356)Y363.CA and (T0356)Y363.CB only 0 apart, marking (T0356)Y363.CB as missing
WARNING: atoms too close: (T0356)L365.CA and (T0356)L365.CB only 0 apart, marking (T0356)L365.CB as missing
WARNING: atoms too close: (T0356)H377.CA and (T0356)H377.CB only 0 apart, marking (T0356)H377.CB as missing
WARNING: atoms too close: (T0356)K396.CA and (T0356)K396.CB only 0 apart, marking (T0356)K396.CB as missing
WARNING: atoms too close: (T0356)V398.CA and (T0356)V398.CB only 0 apart, marking (T0356)V398.CB as missing
WARNING: atoms too close: (T0356)I399.CA and (T0356)I399.CB only 0 apart, marking (T0356)I399.CB as missing
WARNING: atoms too close: (T0356)A407.CA and (T0356)A407.CB only 0 apart, marking (T0356)A407.CB as missing
WARNING: atoms too close: (T0356)R408.CA and (T0356)R408.CB only 0 apart, marking (T0356)R408.CB as missing
WARNING: atoms too close: (T0356)A416.CA and (T0356)A416.CB only 0 apart, marking (T0356)A416.CB as missing
WARNING: atoms too close: (T0356)R425.CA and (T0356)R425.CB only 0 apart, marking (T0356)R425.CB as missing
WARNING: atoms too close: (T0356)V430.CA and (T0356)V430.CB only 0 apart, marking (T0356)V430.CB as missing
WARNING: atoms too close: (T0356)N457.CA and (T0356)N457.CB only 0 apart, marking (T0356)N457.CB as missing
WARNING: atoms too close: (T0356)T463.CA and (T0356)T463.CB only 0 apart, marking (T0356)T463.CB as missing
WARNING: atoms too close: (T0356)K472.CA and (T0356)K472.CB only 0 apart, marking (T0356)K472.CB as missing
WARNING: atoms too close: (T0356)K473.CA and (T0356)K473.CB only 0 apart, marking (T0356)K473.CB as missing
WARNING: atoms too close: (T0356)D476.CA and (T0356)D476.CB only 0 apart, marking (T0356)D476.CB as missing
WARNING: atoms too close: (T0356)L488.CA and (T0356)L488.CB only 0 apart, marking (T0356)L488.CB as missing
WARNING: atoms too close: (T0356)N493.CA and (T0356)N493.CB only 0 apart, marking (T0356)N493.CB as missing
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS3
# ReadConformPDB reading from PDB file servers/ROKKY_TS4.pdb.gz looking for model 1
WARNING: atoms too close: (T0356)I25.CA and (T0356)I25.CB only 0 apart, marking (T0356)I25.CB as missing
WARNING: atoms too close: (T0356)V29.CA and (T0356)V29.CB only 0 apart, marking (T0356)V29.CB as missing
WARNING: atoms too close: (T0356)P31.CA and (T0356)P31.CB only 0 apart, marking (T0356)P31.CB as missing
WARNING: atoms too close: (T0356)I38.CA and (T0356)I38.CB only 0 apart, marking (T0356)I38.CB as missing
WARNING: atoms too close: (T0356)L51.CA and (T0356)L51.CB only 0 apart, marking (T0356)L51.CB as missing
WARNING: atoms too close: (T0356)Y58.CA and (T0356)Y58.CB only 0 apart, marking (T0356)Y58.CB as missing
WARNING: atoms too close: (T0356)L63.CA and (T0356)L63.CB only 0 apart, marking (T0356)L63.CB as missing
WARNING: atoms too close: (T0356)C64.CA and (T0356)C64.CB only 0 apart, marking (T0356)C64.CB as missing
WARNING: atoms too close: (T0356)T69.CA and (T0356)T69.CB only 0 apart, marking (T0356)T69.CB as missing
WARNING: atoms too close: (T0356)M75.CA and (T0356)M75.CB only 0 apart, marking (T0356)M75.CB as missing
WARNING: atoms too close: (T0356)K96.CA and (T0356)K96.CB only 0 apart, marking (T0356)K96.CB as missing
WARNING: atoms too close: (T0356)D109.CA and (T0356)D109.CB only 0 apart, marking (T0356)D109.CB as missing
WARNING: atoms too close: (T0356)K110.CA and (T0356)K110.CB only 0 apart, marking (T0356)K110.CB as missing
WARNING: atoms too close: (T0356)P112.CA and (T0356)P112.CB only 0 apart, marking (T0356)P112.CB as missing
WARNING: atoms too close: (T0356)Q113.CA and (T0356)Q113.CB only 0 apart, marking (T0356)Q113.CB as missing
WARNING: atoms too close: (T0356)V117.CA and (T0356)V117.CB only 0 apart, marking (T0356)V117.CB as missing
WARNING: atoms too close: (T0356)L118.CA and (T0356)L118.CB only 0 apart, marking (T0356)L118.CB as missing
WARNING: atoms too close: (T0356)R124.CA and (T0356)R124.CB only 0 apart, marking (T0356)R124.CB as missing
WARNING: atoms too close: (T0356)K133.CA and (T0356)K133.CB only 0 apart, marking (T0356)K133.CB as missing
WARNING: atoms too close: (T0356)I147.CA and (T0356)I147.CB only 0 apart, marking (T0356)I147.CB as missing
WARNING: atoms too close: (T0356)W151.CA and (T0356)W151.CB only 0 apart, marking (T0356)W151.CB as missing
WARNING: atoms too close: (T0356)E153.CA and (T0356)E153.CB only 0 apart, marking (T0356)E153.CB as missing
WARNING: atoms too close: (T0356)D154.CA and (T0356)D154.CB only 0 apart, marking (T0356)D154.CB as missing
WARNING: atoms too close: (T0356)A156.CA and (T0356)A156.CB only 0 apart, marking (T0356)A156.CB as missing
WARNING: atoms too close: (T0356)W161.CA and (T0356)W161.CB only 0 apart, marking (T0356)W161.CB as missing
WARNING: atoms too close: (T0356)P169.CA and (T0356)P169.CB only 0 apart, marking (T0356)P169.CB as missing
WARNING: atoms too close: (T0356)K171.CA and (T0356)K171.CB only 0 apart, marking (T0356)K171.CB as missing
WARNING: atoms too close: (T0356)Q174.CA and (T0356)Q174.CB only 0 apart, marking (T0356)Q174.CB as missing
WARNING: atoms too close: (T0356)I184.CA and (T0356)I184.CB only 0 apart, marking (T0356)I184.CB as missing
WARNING: atoms too close: (T0356)N187.CA and (T0356)N187.CB only 0 apart, marking (T0356)N187.CB as missing
WARNING: atoms too close: (T0356)R192.CA and (T0356)R192.CB only 0 apart, marking (T0356)R192.CB as missing
WARNING: atoms too close: (T0356)L194.CA and (T0356)L194.CB only 0 apart, marking (T0356)L194.CB as missing
WARNING: atoms too close: (T0356)H196.CA and (T0356)H196.CB only 0 apart, marking (T0356)H196.CB as missing
WARNING: atoms too close: (T0356)R197.CA and (T0356)R197.CB only 0 apart, marking (T0356)R197.CB as missing
WARNING: atoms too close: (T0356)E205.CA and (T0356)E205.CB only 0 apart, marking (T0356)E205.CB as missing
WARNING: atoms too close: (T0356)C207.CA and (T0356)C207.CB only 0 apart, marking (T0356)C207.CB as missing
WARNING: atoms too close: (T0356)H210.CA and (T0356)H210.CB only 0 apart, marking (T0356)H210.CB as missing
WARNING: atoms too close: (T0356)S218.CA and (T0356)S218.CB only 0 apart, marking (T0356)S218.CB as missing
WARNING: atoms too close: (T0356)V219.CA and (T0356)V219.CB only 0 apart, marking (T0356)V219.CB as missing
WARNING: atoms too close: (T0356)A220.CA and (T0356)A220.CB only 0 apart, marking (T0356)A220.CB as missing
WARNING: atoms too close: (T0356)K252.CA and (T0356)K252.CB only 0 apart, marking (T0356)K252.CB as missing
WARNING: atoms too close: (T0356)D262.CA and (T0356)D262.CB only 0 apart, marking (T0356)D262.CB as missing
WARNING: atoms too close: (T0356)L263.CA and (T0356)L263.CB only 0 apart, marking (T0356)L263.CB as missing
WARNING: atoms too close: (T0356)V265.CA and (T0356)V265.CB only 0 apart, marking (T0356)V265.CB as missing
WARNING: atoms too close: (T0356)P266.CA and (T0356)P266.CB only 0 apart, marking (T0356)P266.CB as missing
WARNING: atoms too close: (T0356)L273.CA and (T0356)L273.CB only 0 apart, marking (T0356)L273.CB as missing
WARNING: atoms too close: (T0356)E274.CA and (T0356)E274.CB only 0 apart, marking (T0356)E274.CB as missing
WARNING: atoms too close: (T0356)Q279.CA and (T0356)Q279.CB only 0 apart, marking (T0356)Q279.CB as missing
WARNING: atoms too close: (T0356)P287.CA and (T0356)P287.CB only 0 apart, marking (T0356)P287.CB as missing
WARNING: atoms too close: (T0356)Y295.CA and (T0356)Y295.CB only 0 apart, marking (T0356)Y295.CB as missing
WARNING: atoms too close: (T0356)D299.CA and (T0356)D299.CB only 0 apart, marking (T0356)D299.CB as missing
WARNING: atoms too close: (T0356)D314.CA and (T0356)D314.CB only 0 apart, marking (T0356)D314.CB as missing
WARNING: atoms too close: (T0356)I316.CA and (T0356)I316.CB only 0 apart, marking (T0356)I316.CB as missing
WARNING: atoms too close: (T0356)R324.CA and (T0356)R324.CB only 0 apart, marking (T0356)R324.CB as missing
WARNING: atoms too close: (T0356)P342.CA and (T0356)P342.CB only 0 apart, marking (T0356)P342.CB as missing
WARNING: atoms too close: (T0356)Q345.CA and (T0356)Q345.CB only 0 apart, marking (T0356)Q345.CB as missing
WARNING: atoms too close: (T0356)C361.CA and (T0356)C361.CB only 0 apart, marking (T0356)C361.CB as missing
WARNING: atoms too close: (T0356)A366.CA and (T0356)A366.CB only 0 apart, marking (T0356)A366.CB as missing
WARNING: atoms too close: (T0356)T369.CA and (T0356)T369.CB only 0 apart, marking (T0356)T369.CB as missing
WARNING: atoms too close: (T0356)H377.CA and (T0356)H377.CB only 0 apart, marking (T0356)H377.CB as missing
WARNING: atoms too close: (T0356)V385.CA and (T0356)V385.CB only 0 apart, marking (T0356)V385.CB as missing
WARNING: atoms too close: (T0356)L389.CA and (T0356)L389.CB only 0 apart, marking (T0356)L389.CB as missing
WARNING: atoms too close: (T0356)F397.CA and (T0356)F397.CB only 0 apart, marking (T0356)F397.CB as missing
WARNING: atoms too close: (T0356)V400.CA and (T0356)V400.CB only 0 apart, marking (T0356)V400.CB as missing
WARNING: atoms too close: (T0356)R408.CA and (T0356)R408.CB only 0 apart, marking (T0356)R408.CB as missing
WARNING: atoms too close: (T0356)W410.CA and (T0356)W410.CB only 0 apart, marking (T0356)W410.CB as missing
WARNING: atoms too close: (T0356)A416.CA and (T0356)A416.CB only 0 apart, marking (T0356)A416.CB as missing
WARNING: atoms too close: (T0356)R425.CA and (T0356)R425.CB only 0 apart, marking (T0356)R425.CB as missing
WARNING: atoms too close: (T0356)E431.CA and (T0356)E431.CB only 0 apart, marking (T0356)E431.CB as missing
WARNING: atoms too close: (T0356)N432.CA and (T0356)N432.CB only 0 apart, marking (T0356)N432.CB as missing
WARNING: atoms too close: (T0356)I435.CA and (T0356)I435.CB only 0 apart, marking (T0356)I435.CB as missing
WARNING: atoms too close: (T0356)T456.CA and (T0356)T456.CB only 0 apart, marking (T0356)T456.CB as missing
WARNING: atoms too close: (T0356)W467.CA and (T0356)W467.CB only 0 apart, marking (T0356)W467.CB as missing
WARNING: atoms too close: (T0356)K473.CA and (T0356)K473.CB only 0 apart, marking (T0356)K473.CB as missing
WARNING: atoms too close: (T0356)D474.CA and (T0356)D474.CB only 0 apart, marking (T0356)D474.CB as missing
WARNING: atoms too close: (T0356)V478.CA and (T0356)V478.CB only 0 apart, marking (T0356)V478.CB as missing
WARNING: atoms too close: (T0356)A479.CA and (T0356)A479.CB only 0 apart, marking (T0356)A479.CB as missing
WARNING: atoms too close: (T0356)I481.CA and (T0356)I481.CB only 0 apart, marking (T0356)I481.CB as missing
WARNING: atoms too close: (T0356)N493.CA and (T0356)N493.CB only 0 apart, marking (T0356)N493.CB as missing
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS4
# ReadConformPDB reading from PDB file servers/ROKKY_TS5.pdb.gz looking for model 1
WARNING: atoms too close: (T0356)D11.CA and (T0356)D11.CB only 0 apart, marking (T0356)D11.CB as missing
WARNING: atoms too close: (T0356)F12.CA and (T0356)F12.CB only 0 apart, marking (T0356)F12.CB as missing
WARNING: atoms too close: (T0356)E17.CA and (T0356)E17.CB only 0 apart, marking (T0356)E17.CB as missing
WARNING: atoms too close: (T0356)L51.CA and (T0356)L51.CB only 0 apart, marking (T0356)L51.CB as missing
WARNING: atoms too close: (T0356)N54.CA and (T0356)N54.CB only 0 apart, marking (T0356)N54.CB as missing
WARNING: atoms too close: (T0356)P70.CA and (T0356)P70.CB only 0 apart, marking (T0356)P70.CB as missing
WARNING: atoms too close: (T0356)K96.CA and (T0356)K96.CB only 0 apart, marking (T0356)K96.CB as missing
WARNING: atoms too close: (T0356)E99.CA and (T0356)E99.CB only 0 apart, marking (T0356)E99.CB as missing
WARNING: atoms too close: (T0356)D109.CA and (T0356)D109.CB only 0 apart, marking (T0356)D109.CB as missing
WARNING: atoms too close: (T0356)K110.CA and (T0356)K110.CB only 0 apart, marking (T0356)K110.CB as missing
WARNING: atoms too close: (T0356)L111.CA and (T0356)L111.CB only 0 apart, marking (T0356)L111.CB as missing
WARNING: atoms too close: (T0356)Q113.CA and (T0356)Q113.CB only 0 apart, marking (T0356)Q113.CB as missing
WARNING: atoms too close: (T0356)F114.CA and (T0356)F114.CB only 0 apart, marking (T0356)F114.CB as missing
WARNING: atoms too close: (T0356)R126.CA and (T0356)R126.CB only 0 apart, marking (T0356)R126.CB as missing
WARNING: atoms too close: (T0356)A128.CA and (T0356)A128.CB only 0 apart, marking (T0356)A128.CB as missing
WARNING: atoms too close: (T0356)P146.CA and (T0356)P146.CB only 0 apart, marking (T0356)P146.CB as missing
WARNING: atoms too close: (T0356)T149.CA and (T0356)T149.CB only 0 apart, marking (T0356)T149.CB as missing
WARNING: atoms too close: (T0356)L158.CA and (T0356)L158.CB only 0 apart, marking (T0356)L158.CB as missing
WARNING: atoms too close: (T0356)T166.CA and (T0356)T166.CB only 0 apart, marking (T0356)T166.CB as missing
WARNING: atoms too close: (T0356)P169.CA and (T0356)P169.CB only 0 apart, marking (T0356)P169.CB as missing
WARNING: atoms too close: (T0356)H170.CA and (T0356)H170.CB only 0 apart, marking (T0356)H170.CB as missing
WARNING: atoms too close: (T0356)Q174.CA and (T0356)Q174.CB only 0 apart, marking (T0356)Q174.CB as missing
WARNING: atoms too close: (T0356)Q182.CA and (T0356)Q182.CB only 0 apart, marking (T0356)Q182.CB as missing
WARNING: atoms too close: (T0356)I184.CA and (T0356)I184.CB only 0 apart, marking (T0356)I184.CB as missing
WARNING: atoms too close: (T0356)K188.CA and (T0356)K188.CB only 0 apart, marking (T0356)K188.CB as missing
WARNING: atoms too close: (T0356)L201.CA and (T0356)L201.CB only 0 apart, marking (T0356)L201.CB as missing
WARNING: atoms too close: (T0356)Y203.CA and (T0356)Y203.CB only 0 apart, marking (T0356)Y203.CB as missing
WARNING: atoms too close: (T0356)Q204.CA and (T0356)Q204.CB only 0 apart, marking (T0356)Q204.CB as missing
WARNING: atoms too close: (T0356)C207.CA and (T0356)C207.CB only 0 apart, marking (T0356)C207.CB as missing
WARNING: atoms too close: (T0356)P216.CA and (T0356)P216.CB only 0 apart, marking (T0356)P216.CB as missing
WARNING: atoms too close: (T0356)S218.CA and (T0356)S218.CB only 0 apart, marking (T0356)S218.CB as missing
WARNING: atoms too close: (T0356)V219.CA and (T0356)V219.CB only 0 apart, marking (T0356)V219.CB as missing
WARNING: atoms too close: (T0356)L221.CA and (T0356)L221.CB only 0 apart, marking (T0356)L221.CB as missing
WARNING: atoms too close: (T0356)A223.CA and (T0356)A223.CB only 0 apart, marking (T0356)A223.CB as missing
WARNING: atoms too close: (T0356)I228.CA and (T0356)I228.CB only 0 apart, marking (T0356)I228.CB as missing
WARNING: atoms too close: (T0356)A231.CA and (T0356)A231.CB only 0 apart, marking (T0356)A231.CB as missing
WARNING: atoms too close: (T0356)V235.CA and (T0356)V235.CB only 0 apart, marking (T0356)V235.CB as missing
WARNING: atoms too close: (T0356)F244.CA and (T0356)F244.CB only 0 apart, marking (T0356)F244.CB as missing
WARNING: atoms too close: (T0356)A245.CA and (T0356)A245.CB only 0 apart, marking (T0356)A245.CB as missing
WARNING: atoms too close: (T0356)R249.CA and (T0356)R249.CB only 0 apart, marking (T0356)R249.CB as missing
WARNING: atoms too close: (T0356)E254.CA and (T0356)E254.CB only 0 apart, marking (T0356)E254.CB as missing
WARNING: atoms too close: (T0356)V255.CA and (T0356)V255.CB only 0 apart, marking (T0356)V255.CB as missing
WARNING: atoms too close: (T0356)I259.CA and (T0356)I259.CB only 0 apart, marking (T0356)I259.CB as missing
WARNING: atoms too close: (T0356)D262.CA and (T0356)D262.CB only 0 apart, marking (T0356)D262.CB as missing
WARNING: atoms too close: (T0356)V265.CA and (T0356)V265.CB only 0 apart, marking (T0356)V265.CB as missing
WARNING: atoms too close: (T0356)I271.CA and (T0356)I271.CB only 0 apart, marking (T0356)I271.CB as missing
WARNING: atoms too close: (T0356)E274.CA and (T0356)E274.CB only 0 apart, marking (T0356)E274.CB as missing
WARNING: atoms too close: (T0356)T282.CA and (T0356)T282.CB only 0 apart, marking (T0356)T282.CB as missing
WARNING: atoms too close: (T0356)T292.CA and (T0356)T292.CB only 0 apart, marking (T0356)T292.CB as missing
WARNING: atoms too close: (T0356)Y295.CA and (T0356)Y295.CB only 0 apart, marking (T0356)Y295.CB as missing
WARNING: atoms too close: (T0356)F304.CA and (T0356)F304.CB only 0 apart, marking (T0356)F304.CB as missing
WARNING: atoms too close: (T0356)Q311.CA and (T0356)Q311.CB only 0 apart, marking (T0356)Q311.CB as missing
WARNING: atoms too close: (T0356)R312.CA and (T0356)R312.CB only 0 apart, marking (T0356)R312.CB as missing
WARNING: atoms too close: (T0356)Y317.CA and (T0356)Y317.CB only 0 apart, marking (T0356)Y317.CB as missing
WARNING: atoms too close: (T0356)S319.CA and (T0356)S319.CB only 0 apart, marking (T0356)S319.CB as missing
WARNING: atoms too close: (T0356)R324.CA and (T0356)R324.CB only 0 apart, marking (T0356)R324.CB as missing
WARNING: atoms too close: (T0356)N337.CA and (T0356)N337.CB only 0 apart, marking (T0356)N337.CB as missing
WARNING: atoms too close: (T0356)F340.CA and (T0356)F340.CB only 0 apart, marking (T0356)F340.CB as missing
WARNING: atoms too close: (T0356)F348.CA and (T0356)F348.CB only 0 apart, marking (T0356)F348.CB as missing
WARNING: atoms too close: (T0356)P358.CA and (T0356)P358.CB only 0 apart, marking (T0356)P358.CB as missing
WARNING: atoms too close: (T0356)Y363.CA and (T0356)Y363.CB only 0 apart, marking (T0356)Y363.CB as missing
WARNING: atoms too close: (T0356)H377.CA and (T0356)H377.CB only 0 apart, marking (T0356)H377.CB as missing
WARNING: atoms too close: (T0356)R390.CA and (T0356)R390.CB only 0 apart, marking (T0356)R390.CB as missing
WARNING: atoms too close: (T0356)R408.CA and (T0356)R408.CB only 0 apart, marking (T0356)R408.CB as missing
WARNING: atoms too close: (T0356)D409.CA and (T0356)D409.CB only 0 apart, marking (T0356)D409.CB as missing
WARNING: atoms too close: (T0356)V413.CA and (T0356)V413.CB only 0 apart, marking (T0356)V413.CB as missing
WARNING: atoms too close: (T0356)D422.CA and (T0356)D422.CB only 0 apart, marking (T0356)D422.CB as missing
WARNING: atoms too close: (T0356)T433.CA and (T0356)T433.CB only 0 apart, marking (T0356)T433.CB as missing
WARNING: atoms too close: (T0356)P434.CA and (T0356)P434.CB only 0 apart, marking (T0356)P434.CB as missing
WARNING: atoms too close: (T0356)I435.CA and (T0356)I435.CB only 0 apart, marking (T0356)I435.CB as missing
WARNING: atoms too close: (T0356)T463.CA and (T0356)T463.CB only 0 apart, marking (T0356)T463.CB as missing
WARNING: atoms too close: (T0356)W467.CA and (T0356)W467.CB only 0 apart, marking (T0356)W467.CB as missing
WARNING: atoms too close: (T0356)P470.CA and (T0356)P470.CB only 0 apart, marking (T0356)P470.CB as missing
WARNING: atoms too close: (T0356)P475.CA and (T0356)P475.CB only 0 apart, marking (T0356)P475.CB as missing
WARNING: atoms too close: (T0356)W485.CA and (T0356)W485.CB only 0 apart, marking (T0356)W485.CB as missing
WARNING: atoms too close: (T0356)N493.CA and (T0356)N493.CB only 0 apart, marking (T0356)N493.CB as missing
WARNING: atoms too close: (T0356)S496.CA and (T0356)S496.CB only 0 apart, marking (T0356)S496.CB as missing
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS5
# ReadConformPDB reading from PDB file servers/SAM-T02_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL3
# ReadConformPDB reading from PDB file servers/SAM-T02_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL4
# ReadConformPDB reading from PDB file servers/SAM-T02_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL5
# ReadConformPDB reading from PDB file servers/SAM-T99_AL1.pdb.gz looking for model 1
Skipped atom 186, because occupancy 1 <= existing 1.000 in servers/SAM-T99_AL1.pdb.gz
Skipped atom 188, because occupancy 1.000 <= existing 1.000 in servers/SAM-T99_AL1.pdb.gz
Skipped atom 190, because occupancy 1.000 <= existing 1.000 in servers/SAM-T99_AL1.pdb.gz
Skipped atom 192, because occupancy 1.000 <= existing 1.000 in servers/SAM-T99_AL1.pdb.gz
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL1
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS1.pdb.gz looking for model 1
# Found a chain break before 491
# copying to AlignedFragments data structure
# naming current conformation SAM_T06_server_TS1
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS2
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS3
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS4
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS5
# ReadConformPDB reading from PDB file servers/SP3_TS1.pdb.gz looking for model 1
# Found a chain break before 418
# copying to AlignedFragments data structure
# naming current conformation SP3_TS1
# ReadConformPDB reading from PDB file servers/SP3_TS2.pdb.gz looking for model 1
# Found a chain break before 319
# copying to AlignedFragments data structure
# naming current conformation SP3_TS2
# ReadConformPDB reading from PDB file servers/SP3_TS3.pdb.gz looking for model 1
# Found a chain break before 470
# copying to AlignedFragments data structure
# naming current conformation SP3_TS3
# ReadConformPDB reading from PDB file servers/SP3_TS4.pdb.gz looking for model 1
# Found a chain break before 427
# copying to AlignedFragments data structure
# naming current conformation SP3_TS4
# ReadConformPDB reading from PDB file servers/SP3_TS5.pdb.gz looking for model 1
# Found a chain break before 466
# copying to AlignedFragments data structure
# naming current conformation SP3_TS5
# ReadConformPDB reading from PDB file servers/SP4_TS1.pdb.gz looking for model 1
# Found a chain break before 488
# copying to AlignedFragments data structure
# naming current conformation SP4_TS1
# ReadConformPDB reading from PDB file servers/SP4_TS2.pdb.gz looking for model 1
# Found a chain break before 420
# copying to AlignedFragments data structure
# naming current conformation SP4_TS2
# ReadConformPDB reading from PDB file servers/SP4_TS3.pdb.gz looking for model 1
# Found a chain break before 487
# copying to AlignedFragments data structure
# naming current conformation SP4_TS3
# ReadConformPDB reading from PDB file servers/SP4_TS4.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation SP4_TS4
# ReadConformPDB reading from PDB file servers/SP4_TS5.pdb.gz looking for model 1
# Found a chain break before 489
# copying to AlignedFragments data structure
# naming current conformation SP4_TS5
# ReadConformPDB reading from PDB file servers/SPARKS2_TS1.pdb.gz looking for model 1
# Found a chain break before 301
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS1
# ReadConformPDB reading from PDB file servers/SPARKS2_TS2.pdb.gz looking for model 1
# Found a chain break before 326
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS2
# ReadConformPDB reading from PDB file servers/SPARKS2_TS3.pdb.gz looking for model 1
# Found a chain break before 478
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS3
# ReadConformPDB reading from PDB file servers/SPARKS2_TS4.pdb.gz looking for model 1
# Found a chain break before 473
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS4
# ReadConformPDB reading from PDB file servers/SPARKS2_TS5.pdb.gz looking for model 1
# Found a chain break before 434
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS5
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS2
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS3
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS4
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS5
# ReadConformPDB reading from PDB file servers/UNI-EID_expm_TS1.pdb.gz looking for model 1
WARNING: atoms too close: (T0356)D314.CA and (T0356)V352.CA only 0.000 apart, marking (T0356)V352.CA as missing
WARNING: atoms too close: (T0356)A315.CA and (T0356)D353.CA only 0.000 apart, marking (T0356)D353.CA as missing
WARNING: atoms too close: (T0356)I316.CA and (T0356)F354.CA only 0.000 apart, marking (T0356)F354.CA as missing
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_expm_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL2
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL3
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL4
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL5
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS1.pdb.gz looking for model 1
# Found a chain break before 475
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS1
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS2.pdb.gz looking for model 1
# Found a chain break before 496
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS2
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS3.pdb.gz looking for model 1
# Found a chain break before 493
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS3
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS4.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS4
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS5.pdb.gz looking for model 1
# Found a chain break before 469
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS5
# ReadConformPDB reading from PDB file servers/beautshot_TS1.pdb.gz looking for model 1
# Found a chain break before 504
# copying to AlignedFragments data structure
# naming current conformation beautshot_TS1
# ReadConformPDB reading from PDB file servers/beautshotbase_TS1.pdb.gz looking for model 1
# Found a chain break before 503
# copying to AlignedFragments data structure
# naming current conformation beautshotbase_TS1
# ReadConformPDB reading from PDB file servers/forecast-s_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL1
# ReadConformPDB reading from PDB file servers/forecast-s_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL2
# ReadConformPDB reading from PDB file servers/forecast-s_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL3
# ReadConformPDB reading from PDB file servers/forecast-s_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL4
# ReadConformPDB reading from PDB file servers/forecast-s_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL5
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS1.pdb.gz looking for model 1
# Found a chain break before 500
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS2.pdb.gz looking for model 1
# Found a chain break before 453
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS3.pdb.gz looking for model 1
# Found a chain break before 457
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS4.pdb.gz looking for model 1
# Found a chain break before 420
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS5.pdb.gz looking for model 1
# Found a chain break before 420
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS5
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS1.pdb.gz looking for model 1
WARNING: atoms too close: (T0356)E297.O and (T0356)V298.N only 0.000 apart, marking (T0356)V298.N as missing
WARNING: atoms too close: (T0356)I435.O and (T0356)D436.N only 0.000 apart, marking (T0356)D436.N as missing
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS2.pdb.gz looking for model 1
# Found a chain break before 502
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS3.pdb.gz looking for model 1
# Found a chain break before 502
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS4.pdb.gz looking for model 1
WARNING: atoms too close: (T0356)K56.O and (T0356)G57.N only 0.000 apart, marking (T0356)G57.N as missing
WARNING: atoms too close: (T0356)E487.O and (T0356)L488.N only 0.000 apart, marking (T0356)L488.N as missing
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS5.pdb.gz looking for model 1
# Found a chain break before 502
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS5
# ReadConformPDB reading from PDB file servers/karypis.srv_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS5
# ReadConformPDB reading from PDB file servers/keasar-server_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation keasar-server_TS1
# ReadConformPDB reading from PDB file servers/keasar-server_TS2.pdb.gz looking for model 1
# naming current conformation keasar-server_TS2
# ReadConformPDB reading from PDB file servers/keasar-server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation keasar-server_TS3
# ReadConformPDB reading from PDB file servers/keasar-server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation keasar-server_TS5
# ReadConformPDB reading from PDB file servers/mGen-3D_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation mGen-3D_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS2
# ReadConformPDB reading from PDB file servers/nFOLD_TS3.pdb.gz looking for model 1
WARNING: atom 1 has residue number 1 < previous residue 470 in servers/nFOLD_TS3.pdb.gz
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS3
# ReadConformPDB reading from PDB file servers/nFOLD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS4
# ReadConformPDB reading from PDB file servers/nFOLD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS5
# ReadConformPDB reading from PDB file servers/shub_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0356 can't currently be optimized by undertaker
# naming current conformation shub_TS1
# command:Using radius: 8.0000
Metaserver mode
NUMB_ALIGNS: 248
model score 1.7970
model score 1.7828
model score 1.5283
model score 1.7700
model score 1.7687
model score 1.4988
model score 1.7315
model score 1.7302
model score 1.7275
model score 2.3675
model score 2.3728
model score 2.3881
model score 2.3960
model score 2.4294
model score 2.2395
model score 2.2921
model score 2.0630
model score 2.3660
model score 2.2903
model score 2.2395
model score 2.2921
model score 2.0630
model score 2.3660
model score 2.2903
model score 2.0628
model score 1.9877
model score 2.2904
model score 2.2114
model score 2.1195
model score 1.9596
model score 1.9017
model score 2.0047
model score 2.1300
model score 1.9895
model score 1.9881
model score 2.9900
model score 2.0992
model score 2.1104
model score 2.7199
model score 3.3470
model score 1.7666
model score 1.8628
model score 1.7325
model score 1.8453
model score 1.8408
model score 1.8299
model score 1.3346
model score 1.4796
model score 1.6261
model score 1.5083
model score 1.2753
model score 1.2784
model score 1.2783
model score 1.2773
model score 1.2770
model score 2.0613
model score 1.3894
model score 1.3171
model score 1.2760
model score 1.5468
model score 2.1545
model score 1.7325
model score 1.8453
model score 1.7666
model score 1.8628
model score 1.9877
model score 2.4335
model score 2.2904
model score 2.3370
model score 2.1982
model score 1.2802
model score 1.2785
model score 1.2805
model score 1.2773
model score 1.2785
model score 1.2785
model score 1.2773
model score 1.2808
model score 1.2804
model score 1.2797
model score 1.2771
model score 1.2771
model score 1.2771
model score 1.2793
model score 1.2771
model score 1.9992
model score 2.2178
model score 2.3301
model score 2.1545
model score 2.1000
model score 2.1685
model score 1.9074
model score 2.4043
model score 2.3062
model score 1.8435
model score 1.7662
model score 1.7625
model score 1.4455
model score 1.6644
model score 1.5032
model score 1.7116
model score 1.8318
model score 1.7873
model score 1.5565
model score 2.0149
model score 2.2067
model score 1.9015
model score 2.0841
model score 2.0354
model score 1.8571
model score 2.0708
model score 2.0809
model score 2.0620
model score 1.8571
model score 2.0354
model score 2.0708
model score 2.0809
model score 2.0620
model score 2.1317
model score 2.0143
model score 2.1492
model score 2.1388
model score 2.0143
model score 2.0589
model score 2.2357
model score 1.2771
model score 1.2771
model score 1.2781
model score 2.4178
model score 1.8394
model score 1.4138
model score 1.8325
model score 1.8419
model score 1.9349
model score 2.0017
model score 2.0949
model score 2.1654
model score 2.1310
model score 2.0963
model score 1.3092
model score 1.8413
model score 1.7311
model score 1.3904
model score 1.4628
model score 2.4731
model score 2.0017
model score 1.8430
model score 2.0949
model score 2.0988
model score 2.1654
model score 2.1061
model score 2.1767
model score 2.1972
model score 2.2314
model score 1.8937
model score 1.9849
model score 2.0641
model score 2.1105
model score 2.2111
model score 2.0643
model score 1.9621
model score 2.0499
model score 2.0758
model score 2.1784
model score 2.0595
model score 1.7678
model score 2.0764
model score 1.7940
model score 2.1033
model score 1.8271
model score 1.8935
model score 1.8523
model score 1.9303
model score 1.8167
model score 1.9800
model score 1.2771
model score 1.2771
model score 1.2771
model score 1.2771
model score 2.0230
model score 1.1136
model score 1.0739
model score 1.3792
model score 1.0491
model score 2.0091
model score 1.8272
model score 2.1243
model score 2.1972
model score 1.8937
model score 2.0288
model score 2.2592
model score 1.8432
model score 2.1339
model score 1.8657
model score 2.0589
model score 2.1603
model score 2.4272
model score 2.3831
model score 2.1935
model score 1.2773
model score 1.2756
model score 1.2792
model score 1.2797
model score 1.2796
model score 1.1662
model score 1.2771
model score 1.2771
model score 1.2773
model score 1.2771
model score 1.2771
model score 1.7543
model score 1.9897
model score 2.0530
model score 1.8052
model score 1.8158
model score 1.9400
model score 1.9392
model score 1.2771
model score 1.2775
model score 1.2771
model score 1.2771
model score 1.2776
model score 2.4127
model score 2.5406
model score 2.8399
model score 2.6431
model score 2.3547
model score 2.5361
model score 2.6781
model score 2.4724
model score 2.5289
model score 2.4018
model score 2.1835
model score 2.2990
model score 1.9517
model score 2.0175
model score 2.2076
model score 1.9602
model score 2.0401
model score 2.0155
model score 1.7941
model score 1.3170
model score 2.1845
model score 2.3260
model score 2.1576
model score 2.2939
model score 2.1845
model score 2.2257
weight: 0.7071 eval: 1.7970 min: 1.0491 max: 3.3470
weight: 0.7126 eval: 1.7828 min: 1.0491 max: 3.3470
weight: 0.8123 eval: 1.5283 min: 1.0491 max: 3.3470
weight: 0.7177 eval: 1.7700 min: 1.0491 max: 3.3470
weight: 0.7182 eval: 1.7687 min: 1.0491 max: 3.3470
weight: 0.8238 eval: 1.4988 min: 1.0491 max: 3.3470
weight: 0.7327 eval: 1.7315 min: 1.0491 max: 3.3470
weight: 0.7332 eval: 1.7302 min: 1.0491 max: 3.3470
weight: 0.7343 eval: 1.7275 min: 1.0491 max: 3.3470
weight: 0.4836 eval: 2.3675 min: 1.0491 max: 3.3470
weight: 0.4816 eval: 2.3728 min: 1.0491 max: 3.3470
weight: 0.4756 eval: 2.3881 min: 1.0491 max: 3.3470
weight: 0.4725 eval: 2.3960 min: 1.0491 max: 3.3470
weight: 0.4594 eval: 2.4294 min: 1.0491 max: 3.3470
weight: 0.5338 eval: 2.2395 min: 1.0491 max: 3.3470
weight: 0.5132 eval: 2.2921 min: 1.0491 max: 3.3470
weight: 0.6029 eval: 2.0630 min: 1.0491 max: 3.3470
weight: 0.4842 eval: 2.3660 min: 1.0491 max: 3.3470
weight: 0.5139 eval: 2.2903 min: 1.0491 max: 3.3470
weight: 0.5338 eval: 2.2395 min: 1.0491 max: 3.3470
weight: 0.5132 eval: 2.2921 min: 1.0491 max: 3.3470
weight: 0.6029 eval: 2.0630 min: 1.0491 max: 3.3470
weight: 0.4842 eval: 2.3660 min: 1.0491 max: 3.3470
weight: 0.5139 eval: 2.2903 min: 1.0491 max: 3.3470
weight: 0.6030 eval: 2.0628 min: 1.0491 max: 3.3470
weight: 0.6324 eval: 1.9877 min: 1.0491 max: 3.3470
weight: 0.5138 eval: 2.2904 min: 1.0491 max: 3.3470
weight: 0.5448 eval: 2.2114 min: 1.0491 max: 3.3470
weight: 0.5807 eval: 2.1195 min: 1.0491 max: 3.3470
weight: 0.6434 eval: 1.9596 min: 1.0491 max: 3.3470
weight: 0.6661 eval: 1.9017 min: 1.0491 max: 3.3470
weight: 0.6257 eval: 2.0047 min: 1.0491 max: 3.3470
weight: 0.5766 eval: 2.1300 min: 1.0491 max: 3.3470
weight: 0.6317 eval: 1.9895 min: 1.0491 max: 3.3470
weight: 0.6322 eval: 1.9881 min: 1.0491 max: 3.3470
weight: 0.2398 eval: 2.9900 min: 1.0491 max: 3.3470
weight: 0.5887 eval: 2.0992 min: 1.0491 max: 3.3470
weight: 0.5843 eval: 2.1104 min: 1.0491 max: 3.3470
weight: 0.3456 eval: 2.7199 min: 1.0491 max: 3.3470
weight: 0.1000 eval: 3.3470 min: 1.0491 max: 3.3470
weight: 0.7190 eval: 1.7666 min: 1.0491 max: 3.3470
weight: 0.6813 eval: 1.8628 min: 1.0491 max: 3.3470
weight: 0.7323 eval: 1.7325 min: 1.0491 max: 3.3470
weight: 0.6882 eval: 1.8453 min: 1.0491 max: 3.3470
weight: 0.6899 eval: 1.8408 min: 1.0491 max: 3.3470
weight: 0.6942 eval: 1.8299 min: 1.0491 max: 3.3470
weight: 0.8882 eval: 1.3346 min: 1.0491 max: 3.3470
weight: 0.8314 eval: 1.4796 min: 1.0491 max: 3.3470
weight: 0.7740 eval: 1.6261 min: 1.0491 max: 3.3470
weight: 0.8201 eval: 1.5083 min: 1.0491 max: 3.3470
weight: 0.9114 eval: 1.2753 min: 1.0491 max: 3.3470
weight: 0.9102 eval: 1.2784 min: 1.0491 max: 3.3470
weight: 0.9102 eval: 1.2783 min: 1.0491 max: 3.3470
weight: 0.9106 eval: 1.2773 min: 1.0491 max: 3.3470
weight: 0.9107 eval: 1.2770 min: 1.0491 max: 3.3470
weight: 0.6035 eval: 2.0613 min: 1.0491 max: 3.3470
weight: 0.8667 eval: 1.3894 min: 1.0491 max: 3.3470
weight: 0.8950 eval: 1.3171 min: 1.0491 max: 3.3470
weight: 0.9111 eval: 1.2760 min: 1.0491 max: 3.3470
weight: 0.8051 eval: 1.5468 min: 1.0491 max: 3.3470
weight: 0.5671 eval: 2.1545 min: 1.0491 max: 3.3470
weight: 0.7323 eval: 1.7325 min: 1.0491 max: 3.3470
weight: 0.6882 eval: 1.8453 min: 1.0491 max: 3.3470
weight: 0.7190 eval: 1.7666 min: 1.0491 max: 3.3470
weight: 0.6813 eval: 1.8628 min: 1.0491 max: 3.3470
weight: 0.6324 eval: 1.9877 min: 1.0491 max: 3.3470
weight: 0.4578 eval: 2.4335 min: 1.0491 max: 3.3470
weight: 0.5138 eval: 2.2904 min: 1.0491 max: 3.3470
weight: 0.4956 eval: 2.3370 min: 1.0491 max: 3.3470
weight: 0.5499 eval: 2.1982 min: 1.0491 max: 3.3470
weight: 0.9095 eval: 1.2802 min: 1.0491 max: 3.3470
weight: 0.9101 eval: 1.2785 min: 1.0491 max: 3.3470
weight: 0.9094 eval: 1.2805 min: 1.0491 max: 3.3470
weight: 0.9106 eval: 1.2773 min: 1.0491 max: 3.3470
weight: 0.9101 eval: 1.2785 min: 1.0491 max: 3.3470
weight: 0.9101 eval: 1.2785 min: 1.0491 max: 3.3470
weight: 0.9106 eval: 1.2773 min: 1.0491 max: 3.3470
weight: 0.9092 eval: 1.2808 min: 1.0491 max: 3.3470
weight: 0.9094 eval: 1.2804 min: 1.0491 max: 3.3470
weight: 0.9097 eval: 1.2797 min: 1.0491 max: 3.3470
weight: 0.9107 eval: 1.2771 min: 1.0491 max: 3.3470
weight: 0.9107 eval: 1.2771 min: 1.0491 max: 3.3470
weight: 0.9107 eval: 1.2771 min: 1.0491 max: 3.3470
weight: 0.9098 eval: 1.2793 min: 1.0491 max: 3.3470
weight: 0.9107 eval: 1.2771 min: 1.0491 max: 3.3470
weight: 0.6279 eval: 1.9992 min: 1.0491 max: 3.3470
weight: 0.5423 eval: 2.2178 min: 1.0491 max: 3.3470
weight: 0.4983 eval: 2.3301 min: 1.0491 max: 3.3470
weight: 0.5671 eval: 2.1545 min: 1.0491 max: 3.3470
weight: 0.5884 eval: 2.1000 min: 1.0491 max: 3.3470
weight: 0.5616 eval: 2.1685 min: 1.0491 max: 3.3470
weight: 0.6638 eval: 1.9074 min: 1.0491 max: 3.3470
weight: 0.4692 eval: 2.4043 min: 1.0491 max: 3.3470
weight: 0.5076 eval: 2.3062 min: 1.0491 max: 3.3470
weight: 0.6889 eval: 1.8435 min: 1.0491 max: 3.3470
weight: 0.7191 eval: 1.7662 min: 1.0491 max: 3.3470
weight: 0.7206 eval: 1.7625 min: 1.0491 max: 3.3470
weight: 0.8447 eval: 1.4455 min: 1.0491 max: 3.3470
weight: 0.7590 eval: 1.6644 min: 1.0491 max: 3.3470
weight: 0.8221 eval: 1.5032 min: 1.0491 max: 3.3470
weight: 0.7405 eval: 1.7116 min: 1.0491 max: 3.3470
weight: 0.6934 eval: 1.8318 min: 1.0491 max: 3.3470
weight: 0.7109 eval: 1.7873 min: 1.0491 max: 3.3470
weight: 0.8013 eval: 1.5565 min: 1.0491 max: 3.3470
weight: 0.6217 eval: 2.0149 min: 1.0491 max: 3.3470
weight: 0.5466 eval: 2.2067 min: 1.0491 max: 3.3470
weight: 0.6662 eval: 1.9015 min: 1.0491 max: 3.3470
weight: 0.5946 eval: 2.0841 min: 1.0491 max: 3.3470
weight: 0.6137 eval: 2.0354 min: 1.0491 max: 3.3470
weight: 0.6835 eval: 1.8571 min: 1.0491 max: 3.3470
weight: 0.5998 eval: 2.0708 min: 1.0491 max: 3.3470
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weight: 0.5998 eval: 2.0708 min: 1.0491 max: 3.3470
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weight: 0.6045 eval: 2.0589 min: 1.0491 max: 3.3470
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weight: 0.9107 eval: 1.2771 min: 1.0491 max: 3.3470
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weight: 0.4639 eval: 2.4178 min: 1.0491 max: 3.3470
weight: 0.6905 eval: 1.8394 min: 1.0491 max: 3.3470
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weight: 0.6932 eval: 1.8325 min: 1.0491 max: 3.3470
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weight: 0.6531 eval: 1.9349 min: 1.0491 max: 3.3470
weight: 0.6269 eval: 2.0017 min: 1.0491 max: 3.3470
weight: 0.5904 eval: 2.0949 min: 1.0491 max: 3.3470
weight: 0.5628 eval: 2.1654 min: 1.0491 max: 3.3470
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weight: 0.8380 eval: 1.4628 min: 1.0491 max: 3.3470
weight: 0.4423 eval: 2.4731 min: 1.0491 max: 3.3470
weight: 0.6269 eval: 2.0017 min: 1.0491 max: 3.3470
weight: 0.6891 eval: 1.8430 min: 1.0491 max: 3.3470
weight: 0.5904 eval: 2.0949 min: 1.0491 max: 3.3470
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weight: 0.5584 eval: 2.1767 min: 1.0491 max: 3.3470
weight: 0.5503 eval: 2.1972 min: 1.0491 max: 3.3470
weight: 0.5369 eval: 2.2314 min: 1.0491 max: 3.3470
weight: 0.6692 eval: 1.8937 min: 1.0491 max: 3.3470
weight: 0.6335 eval: 1.9849 min: 1.0491 max: 3.3470
weight: 0.6025 eval: 2.0641 min: 1.0491 max: 3.3470
weight: 0.5843 eval: 2.1105 min: 1.0491 max: 3.3470
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weight: 0.5871 eval: 2.1033 min: 1.0491 max: 3.3470
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weight: 0.6994 eval: 1.8167 min: 1.0491 max: 3.3470
weight: 0.6354 eval: 1.9800 min: 1.0491 max: 3.3470
weight: 0.9107 eval: 1.2771 min: 1.0491 max: 3.3470
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weight: 0.9903 eval: 1.0739 min: 1.0491 max: 3.3470
weight: 0.8707 eval: 1.3792 min: 1.0491 max: 3.3470
weight: 1.0000 eval: 1.0491 min: 1.0491 max: 3.3470
weight: 0.6240 eval: 2.0091 min: 1.0491 max: 3.3470
weight: 0.6952 eval: 1.8272 min: 1.0491 max: 3.3470
weight: 0.5789 eval: 2.1243 min: 1.0491 max: 3.3470
weight: 0.5503 eval: 2.1972 min: 1.0491 max: 3.3470
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weight: 0.5751 eval: 2.1339 min: 1.0491 max: 3.3470
weight: 0.6802 eval: 1.8657 min: 1.0491 max: 3.3470
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weight: 0.6511 eval: 1.9400 min: 1.0491 max: 3.3470
weight: 0.6514 eval: 1.9392 min: 1.0491 max: 3.3470
weight: 0.9107 eval: 1.2771 min: 1.0491 max: 3.3470
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weight: 0.9105 eval: 1.2776 min: 1.0491 max: 3.3470
weight: 0.4659 eval: 2.4127 min: 1.0491 max: 3.3470
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weight: 0.2986 eval: 2.8399 min: 1.0491 max: 3.3470
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weight: 0.4702 eval: 2.4018 min: 1.0491 max: 3.3470
weight: 0.5557 eval: 2.1835 min: 1.0491 max: 3.3470
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weight: 0.6465 eval: 1.9517 min: 1.0491 max: 3.3470
weight: 0.6207 eval: 2.0175 min: 1.0491 max: 3.3470
weight: 0.5463 eval: 2.2076 min: 1.0491 max: 3.3470
weight: 0.6431 eval: 1.9602 min: 1.0491 max: 3.3470
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weight: 0.6215 eval: 2.0155 min: 1.0491 max: 3.3470
weight: 0.7082 eval: 1.7941 min: 1.0491 max: 3.3470
weight: 0.8951 eval: 1.3170 min: 1.0491 max: 3.3470
weight: 0.5553 eval: 2.1845 min: 1.0491 max: 3.3470
weight: 0.4999 eval: 2.3260 min: 1.0491 max: 3.3470
weight: 0.5658 eval: 2.1576 min: 1.0491 max: 3.3470
weight: 0.5125 eval: 2.2939 min: 1.0491 max: 3.3470
weight: 0.5553 eval: 2.1845 min: 1.0491 max: 3.3470
weight: 0.5392 eval: 2.2257 min: 1.0491 max: 3.3470
Adding 60827 constraints to all2.constraints
Done adding distance constraints
# command:Reading probabilities from probabilities.dat
Reading constraints from ConstraintSet all2.constraints
maxweight: 1.0000
Optimizing...
Probability sum: -921.0839, CN propb: -921.0839 weights: 0.2040 constraints: 3556
# command:Found ConstraintSet
# PrintContacts align.constraints_meta02
Number of constraints in align2.constraints 3556
# command:Found ConstraintSet
# PrintContacts align_bonus.constraints_meta02
Number of constraints in align2.constraints.bonus 3556
# command:Found ConstraintSet
# PrintContacts rejected.constraints_meta02
Number of constraints in rejected2.constraints 57271
# command:Found ConstraintSet
# PrintContacts rejected_bonus.constraints_meta02
Number of constraints in rejected2.constraints.bonus 57271
# command:Found ConstraintSet
# PrintContacts non_contacts.constraints_meta02
Number of constraints in noncontact2.constraints 0
# command:Found ConstraintSet
# PrintContacts non_contacts_bonus.constraints_meta02
Number of constraints in noncontact2.constraints.bonus 0
# command:Found ConstraintSet
# PrintContacts all.constraints_meta02
Number of constraints in all2.constraints 60827
# command: