# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/ # command:# reading dunbrack-2191.atoms # #computed average backbone with maximum peptide_sq_deviance = 0.002 # computed average trans backbone unit from 53157 examples # computed average trans backbone unit before proline from 2010 examples # computed average cis backbone unit from 97 examples # trans (non-proline) backbone unit: # CA= -2.2087 1.0126 -0.0030 # O= -0.1499 2.2440 0.0016 # C= -0.6889 1.1368 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4581 -0.0000 0.0000 # cis backbone unit: # CA= -0.1436 2.4534 -0.0002 # O= -2.0284 0.9742 0.0015 # C= -0.8018 1.0771 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4668 0.0000 0.0000 # trans backbone unit before proline: # CA= -2.2100 1.0631 -0.0014 # O= -0.1236 2.2458 0.0075 # C= -0.6872 1.1517 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4660 0.0000 0.0000 # After reading dunbrack-2191.atoms have 2191 chains in training database # Count of chains,residues,atoms: 2191,500310,3902258 # 493341 residues have no bad marker # 3226 residues lack atoms needed to compute omega # 1453 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 4 # HAS_OXT 1167 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 3052 # HAS_UNKNOWN_ATOMS 9 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 979 # NON_PLANAR_PEPTIDE 888 # BAD_PEPTIDE 2680 # Note: may sum to more than number of residues, # because one residue may have multiple problems # command:# Reading rotamer library from dunbrack-2191.rot # command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/ # command:# ReadAtomType exp-pdb.types Read AtomType exp-pdb with 49 types. # command:# ReadClashTable exp-pdb-2191-2symm.clash # Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2 # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0325/ # command:# Making conformation for sequence T0325 numbered 1 through 262 Created new target T0325 from T0325.a2m # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0325/ # command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0325//projects/compbio/experiments/protein-predict/casp7/T0325/align.constraints_v3.costfcn or /projects/compbio/experiments/protein-predict/casp7/T0325//projects/compbio/experiments/protein-predict/casp7/T0325/align.constraints_v3.costfcn.gz for input Trying /projects/compbio/experiments/protein-predict/casp7/T0325/align.constraints_v3.costfcn # reading script from file /projects/compbio/experiments/protein-predict/casp7/T0325/align.constraints_v3.costfcn # future Constraint commands -> align # future HelixConstraint commands -> align # future StrandConstraint commands -> align # future SheetConstraint commands -> align # future Hbond commands -> align # future SSbond commands -> align # Constraint # added constraint: constraint((T0325)H125.CB, (T0325)R155.CB) [> 3.4964 = 5.8273 < 7.5754] w=1.0000 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)L154.CB) [> 3.4769 = 5.7949 < 7.5334] w=0.9634 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)L58.CB) [> 3.6292 = 6.0486 < 7.8632] w=0.9232 to align # Constraint # added constraint: constraint((T0325)M48.CB, (T0325)I60.CB) [> 3.7386 = 6.2310 < 8.1003] w=0.9200 to align # Constraint # added constraint: constraint((T0325)P123.CB, (T0325)L152.CB) [> 3.7356 = 6.2259 < 8.0937] w=0.9186 to align # Constraint # added constraint: constraint((T0325)A51.CB, (T0325)I60.CB) [> 3.2698 = 5.4496 < 7.0845] w=0.9063 to align # Constraint # added constraint: constraint((T0325)D124.CB, (T0325)L152.CB) [> 3.7369 = 6.2282 < 8.0966] w=0.9009 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)R155.CB) [> 3.9870 = 6.6450 < 8.6385] w=0.8988 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)H125.CB) [> 4.0158 = 6.6930 < 8.7009] w=0.8788 to align # Constraint # added constraint: constraint((T0325)T35.CB, (T0325)G61.CA) [> 3.8462 = 6.4104 < 8.3335] w=0.8713 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)A59.CB) [> 3.3594 = 5.5991 < 7.2788] w=0.8690 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)G61.CA) [> 3.5562 = 5.9270 < 7.7050] w=0.8490 to align # Constraint # added constraint: constraint((T0325)H125.CB, (T0325)L154.CB) [> 4.0511 = 6.7517 < 8.7773] w=0.8405 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)A59.CB) [> 3.5774 = 5.9623 < 7.7510] w=0.8146 to align # Constraint # added constraint: constraint((T0325)T35.CB, (T0325)I60.CB) [> 3.7220 = 6.2032 < 8.0642] w=0.8045 to align # Constraint # added constraint: constraint((T0325)M117.CB, (T0325)Y150.CB) [> 3.6740 = 6.1233 < 7.9603] w=0.7946 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)L154.CB) [> 3.6129 = 6.0215 < 7.8279] w=0.7930 to align # Constraint # added constraint: constraint((T0325)I113.CB, (T0325)L146.CB) [> 3.8278 = 6.3797 < 8.2936] w=0.7793 to align # Constraint # added constraint: constraint((T0325)G61.CA, (T0325)P123.CB) [> 3.3047 = 5.5078 < 7.1601] w=0.7596 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)L58.CB) [> 3.8405 = 6.4009 < 8.3211] w=0.7575 to align # Constraint # added constraint: constraint((T0325)G61.CA, (T0325)H125.CB) [> 3.1208 = 5.2014 < 6.7618] w=0.7538 to align # Constraint # added constraint: constraint((T0325)T35.CB, (T0325)A59.CB) [> 3.8561 = 6.4268 < 8.3549] w=0.7533 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)I60.CB) [> 3.9123 = 6.5206 < 8.4767] w=0.7483 to align # Constraint # added constraint: constraint((T0325)D110.CB, (T0325)L146.CB) [> 3.1312 = 5.2187 < 6.7844] w=0.7461 to align # Constraint # added constraint: constraint((T0325)M48.CB, (T0325)S119.CB) [> 3.1928 = 5.3213 < 6.9177] w=0.7363 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)P123.CB) [> 3.5639 = 5.9398 < 7.7217] w=0.7355 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)I60.CB) [> 3.8493 = 6.4155 < 8.3401] w=0.7309 to align # Constraint # added constraint: constraint((T0325)T35.CB, (T0325)L58.CB) [> 3.7179 = 6.1964 < 8.0554] w=0.7084 to align # Constraint # added constraint: constraint((T0325)M48.CB, (T0325)F116.CB) [> 3.8879 = 6.4798 < 8.4237] w=0.6928 to align # Constraint # added constraint: constraint((T0325)I60.CB, (T0325)P123.CB) [> 3.5376 = 5.8960 < 7.6648] w=0.6923 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)S34.CB) [> 3.7112 = 6.1854 < 8.0410] w=0.6833 to align # Constraint # added constraint: constraint((T0325)D124.CB, (T0325)P153.CB) [> 3.7686 = 6.2810 < 8.1653] w=0.6809 to align # Constraint # added constraint: constraint((T0325)G61.CA, (T0325)D124.CB) [> 3.7521 = 6.2535 < 8.1295] w=0.6735 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)V62.CB) [> 3.8610 = 6.4351 < 8.3656] w=0.6734 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)T35.CB) [> 3.8145 = 6.3575 < 8.2647] w=0.6709 to align # Constraint # added constraint: constraint((T0325)I113.CB, (T0325)Y150.CB) [> 3.5534 = 5.9224 < 7.6991] w=0.6685 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)T36.CB) [> 3.6826 = 6.1377 < 7.9790] w=0.6642 to align # Constraint # added constraint: constraint((T0325)A143.CB, (T0325)L154.CB) [> 3.9756 = 6.6259 < 8.6137] w=0.6633 to align # Constraint # added constraint: constraint((T0325)I113.CB, (T0325)A147.CB) [> 3.9678 = 6.6131 < 8.5970] w=0.6608 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)I126.CB) [> 3.0697 = 5.1162 < 6.6510] w=0.6602 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)H63.CB) [> 3.3533 = 5.5888 < 7.2654] w=0.6591 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)T35.CB) [> 3.7804 = 6.3006 < 8.1908] w=0.6589 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)N156.CB) [> 4.0884 = 6.8140 < 8.8581] w=0.6506 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)A37.CB) [> 3.9523 = 6.5871 < 8.5633] w=0.6430 to align # Constraint # added constraint: constraint((T0325)E49.CB, (T0325)S119.CB) [> 3.6309 = 6.0514 < 7.8668] w=0.6385 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)A143.CB) [> 3.6695 = 6.1159 < 7.9506] w=0.6328 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)H63.CB) [> 3.4960 = 5.8267 < 7.5747] w=0.6315 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)A143.CB) [> 3.6042 = 6.0071 < 7.8092] w=0.6307 to align # Constraint # added constraint: constraint((T0325)W109.CB, (T0325)I126.CB) [> 4.0196 = 6.6994 < 8.7092] w=0.6301 to align # Constraint # added constraint: constraint((T0325)M117.CB, (T0325)L152.CB) [> 3.6070 = 6.0117 < 7.8152] w=0.6266 to align # Constraint # added constraint: constraint((T0325)H125.CB, (T0325)L152.CB) [> 3.6864 = 6.1440 < 7.9872] w=0.6219 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)T36.CB) [> 3.6390 = 6.0650 < 7.8845] w=0.6125 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)G61.CA) [> 3.9725 = 6.6209 < 8.6071] w=0.6123 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)F116.CB) [> 3.4086 = 5.6809 < 7.3852] w=0.6056 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)G61.CA) [> 3.5538 = 5.9230 < 7.6999] w=0.5999 to align # Constraint # added constraint: constraint((T0325)L45.CB, (T0325)S119.CB) [> 3.3004 = 5.5006 < 7.1508] w=0.5948 to align # Constraint # added constraint: constraint((T0325)I60.CB, (T0325)R121.CB) [> 3.4861 = 5.8101 < 7.5531] w=0.5947 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)A157.CB) [> 3.5518 = 5.9196 < 7.6955] w=0.5932 to align # Constraint # added constraint: constraint((T0325)G61.CA, (T0325)I126.CB) [> 3.9552 = 6.5921 < 8.5697] w=0.5796 to align # Constraint # added constraint: constraint((T0325)I23.CB, (T0325)S34.CB) [> 4.0837 = 6.8062 < 8.8481] w=0.5764 to align # Constraint # added constraint: constraint((T0325)W109.CB, (T0325)A143.CB) [> 3.8780 = 6.4633 < 8.4023] w=0.5730 to align # Constraint # added constraint: constraint((T0325)R52.CB, (T0325)R121.CB) [> 3.7694 = 6.2823 < 8.1670] w=0.5710 to align # Constraint # added constraint: constraint((T0325)H27.CB, (T0325)L58.CB) [> 3.9170 = 6.5283 < 8.4868] w=0.5626 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)T35.CB) [> 3.4542 = 5.7570 < 7.4841] w=0.5613 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)N156.CB) [> 3.5350 = 5.8916 < 7.6591] w=0.5557 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)N156.CB) [> 3.6206 = 6.0344 < 7.8447] w=0.5543 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)S34.CB) [> 3.4543 = 5.7571 < 7.4842] w=0.5477 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)D127.CB) [> 4.0602 = 6.7670 < 8.7971] w=0.5468 to align # Constraint # added constraint: constraint((T0325)I114.CB, (T0325)Y150.CB) [> 3.7116 = 6.1860 < 8.0418] w=0.5467 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)A147.CB) [> 3.7345 = 6.2242 < 8.0915] w=0.5463 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)L139.CB) [> 3.3289 = 5.5481 < 7.2126] w=0.5445 to align # Constraint # added constraint: constraint((T0325)D124.CB, (T0325)R155.CB) [> 4.0888 = 6.8147 < 8.8591] w=0.5437 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)D127.CB) [> 3.2789 = 5.4648 < 7.1042] w=0.5384 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)H63.CB) [> 3.5440 = 5.9067 < 7.6787] w=0.5349 to align # Constraint # added constraint: constraint((T0325)Y106.CB, (T0325)V142.CB) [> 3.0127 = 5.0212 < 6.5276] w=0.5318 to align # Constraint # added constraint: constraint((T0325)M48.CB, (T0325)R121.CB) [> 3.3233 = 5.5389 < 7.2005] w=0.5307 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)L154.CB) [> 3.8631 = 6.4385 < 8.3701] w=0.5304 to align # Constraint # added constraint: constraint((T0325)H125.CB, (T0325)P153.CB) [> 3.3191 = 5.5319 < 7.1915] w=0.5228 to align # Constraint # added constraint: constraint((T0325)R52.CB, (T0325)G120.CA) [> 3.7915 = 6.3192 < 8.2150] w=0.5184 to align # Constraint # added constraint: constraint((T0325)L197.CB, (T0325)I210.CB) [> 3.7081 = 6.1802 < 8.0343] w=0.5178 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)V62.CB) [> 3.8919 = 6.4866 < 8.4326] w=0.5158 to align # Constraint # added constraint: constraint((T0325)G61.CA, (T0325)D127.CB) [> 4.1375 = 6.8958 < 8.9645] w=0.5123 to align # Constraint # added constraint: constraint((T0325)F44.CB, (T0325)F116.CB) [> 3.5456 = 5.9094 < 7.6822] w=0.5050 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)S34.CB) [> 3.7499 = 6.2499 < 8.1249] w=0.5032 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)I60.CB) [> 3.9716 = 6.6194 < 8.6052] w=0.4980 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)T35.CB) [> 3.9429 = 6.5715 < 8.5429] w=0.4975 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)A37.CB) [> 3.3416 = 5.5693 < 7.2401] w=0.4972 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)A47.CB) [> 3.8113 = 6.3522 < 8.2579] w=0.4946 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)A157.CB) [> 4.0874 = 6.8124 < 8.8561] w=0.4840 to align # Constraint # added constraint: constraint((T0325)Y106.CB, (T0325)L146.CB) [> 3.6253 = 6.0421 < 7.8548] w=0.4811 to align # Constraint # added constraint: constraint((T0325)I113.CB, (T0325)P123.CB) [> 3.8425 = 6.4042 < 8.3254] w=0.4774 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)I113.CB) [> 3.8837 = 6.4728 < 8.4146] w=0.4719 to align # Constraint # added constraint: constraint((T0325)I60.CB, (T0325)R122.CB) [> 3.8657 = 6.4428 < 8.3756] w=0.4695 to align # Constraint # added constraint: constraint((T0325)L102.CB, (T0325)K138.CB) [> 3.6337 = 6.0562 < 7.8731] w=0.4685 to align # Constraint # added constraint: constraint((T0325)K5.CB, (T0325)T33.CB) [> 3.3053 = 5.5089 < 7.1615] w=0.4669 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)A47.CB) [> 3.3879 = 5.6465 < 7.3405] w=0.4633 to align # Constraint # added constraint: constraint((T0325)W109.CB, (T0325)V142.CB) [> 3.9630 = 6.6051 < 8.5866] w=0.4631 to align # Constraint # added constraint: constraint((T0325)D110.CB, (T0325)V142.CB) [> 3.7711 = 6.2852 < 8.1707] w=0.4609 to align # Constraint # added constraint: constraint((T0325)A59.CB, (T0325)H125.CB) [> 4.2439 = 7.0732 < 9.1952] w=0.4592 to align # Constraint # added constraint: constraint((T0325)D124.CB, (T0325)L154.CB) [> 3.6465 = 6.0776 < 7.9008] w=0.4541 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)M48.CB) [> 4.2164 = 7.0273 < 9.1355] w=0.4540 to align # Constraint # added constraint: constraint((T0325)L45.CB, (T0325)S115.CB) [> 3.5861 = 5.9769 < 7.7700] w=0.4524 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)A157.CB) [> 4.1347 = 6.8912 < 8.9585] w=0.4501 to align # Constraint # added constraint: constraint((T0325)V105.CB, (T0325)L139.CB) [> 3.9685 = 6.6141 < 8.5983] w=0.4488 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)V243.CB) [> 4.1740 = 6.9567 < 9.0437] w=0.4446 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)S34.CB) [> 3.9272 = 6.5454 < 8.5090] w=0.4409 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)I126.CB) [> 3.3569 = 5.5948 < 7.2733] w=0.4389 to align # Constraint # added constraint: constraint((T0325)L102.CB, (T0325)V142.CB) [> 3.2612 = 5.4353 < 7.0659] w=0.4385 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)P153.CB) [> 4.1576 = 6.9293 < 9.0082] w=0.4346 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)H63.CB) [> 3.6199 = 6.0331 < 7.8430] w=0.4314 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)I126.CB) [> 4.4371 = 7.3952 < 9.6138] w=0.4286 to align # Constraint # added constraint: constraint((T0325)L197.CB, (T0325)V243.CB) [> 3.5036 = 5.8393 < 7.5911] w=0.4247 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)T33.CB) [> 3.6539 = 6.0899 < 7.9168] w=0.4220 to align # Constraint # added constraint: constraint((T0325)I113.CB, (T0325)I126.CB) [> 3.9298 = 6.5497 < 8.5146] w=0.4218 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)N211.CB) [> 3.6900 = 6.1500 < 7.9950] w=0.4194 to align # Constraint # added constraint: constraint((T0325)L140.CB, (T0325)N156.CB) [> 3.8867 = 6.4778 < 8.4212] w=0.4173 to align # Constraint # added constraint: constraint((T0325)I23.CB, (T0325)A55.CB) [> 3.8942 = 6.4903 < 8.4373] w=0.4162 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)L58.CB) [> 3.6322 = 6.0536 < 7.8698] w=0.4116 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)V105.CB) [> 3.7898 = 6.3163 < 8.2112] w=0.4109 to align # Constraint # added constraint: constraint((T0325)V32.CB, (T0325)L58.CB) [> 3.8873 = 6.4789 < 8.4225] w=0.4103 to align # Constraint # added constraint: constraint((T0325)K5.CB, (T0325)V32.CB) [> 3.9687 = 6.6145 < 8.5988] w=0.4102 to align # Constraint # added constraint: constraint((T0325)I23.CB, (T0325)L58.CB) [> 3.8698 = 6.4497 < 8.3846] w=0.4093 to align # Constraint # added constraint: constraint((T0325)K244.CB, (T0325)L254.CB) [> 3.7173 = 6.1954 < 8.0541] w=0.4055 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)I210.CB) [> 3.5094 = 5.8490 < 7.6037] w=0.4034 to align # Constraint # added constraint: constraint((T0325)F44.CB, (T0325)V62.CB) [> 3.7016 = 6.1693 < 8.0201] w=0.4018 to align # Constraint # added constraint: constraint((T0325)I23.CB, (T0325)A51.CB) [> 3.9023 = 6.5039 < 8.4550] w=0.4013 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)V62.CB) [> 4.0956 = 6.8259 < 8.8737] w=0.4011 to align # Constraint # added constraint: constraint((T0325)V105.CB, (T0325)V142.CB) [> 3.4617 = 5.7694 < 7.5003] w=0.4004 to align # Constraint # added constraint: constraint((T0325)I60.CB, (T0325)F116.CB) [> 4.0047 = 6.6744 < 8.6768] w=0.3989 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)L154.CB) [> 3.7251 = 6.2085 < 8.0710] w=0.3958 to align # Constraint # added constraint: constraint((T0325)L197.CB, (T0325)A246.CB) [> 3.6092 = 6.0154 < 7.8200] w=0.3958 to align # Constraint # added constraint: constraint((T0325)T20.CB, (T0325)S50.CB) [> 3.6855 = 6.1425 < 7.9853] w=0.3938 to align # Constraint # added constraint: constraint((T0325)T20.CB, (T0325)A47.CB) [> 3.7649 = 6.2748 < 8.1573] w=0.3929 to align # Constraint # added constraint: constraint((T0325)L197.CB, (T0325)I247.CB) [> 4.0950 = 6.8250 < 8.8726] w=0.3927 to align # Constraint # added constraint: constraint((T0325)I60.CB, (T0325)D124.CB) [> 3.7325 = 6.2209 < 8.0871] w=0.3903 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)L140.CB) [> 3.4583 = 5.7639 < 7.4930] w=0.3884 to align # Constraint # added constraint: constraint((T0325)D11.CB, (T0325)T36.CB) [> 3.9523 = 6.5872 < 8.5634] w=0.3843 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)T35.CB) [> 4.2082 = 7.0137 < 9.1178] w=0.3825 to align # Constraint # added constraint: constraint((T0325)I24.CB, (T0325)P56.CB) [> 3.6456 = 6.0760 < 7.8988] w=0.3825 to align # Constraint # added constraint: constraint((T0325)V19.CB, (T0325)A47.CB) [> 3.6574 = 6.0956 < 7.9243] w=0.3807 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)V32.CB) [> 3.6780 = 6.1299 < 7.9689] w=0.3796 to align # Constraint # added constraint: constraint((T0325)V200.CB, (T0325)I210.CB) [> 3.6774 = 6.1290 < 7.9677] w=0.3779 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)W109.CB) [> 4.1222 = 6.8703 < 8.9314] w=0.3758 to align # Constraint # added constraint: constraint((T0325)G61.CA, (T0325)F116.CB) [> 4.3693 = 7.2822 < 9.4669] w=0.3736 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)D127.CB) [> 3.7516 = 6.2526 < 8.1284] w=0.3722 to align # Constraint # added constraint: constraint((T0325)C212.CB, (T0325)R231.CB) [> 3.4606 = 5.7676 < 7.4979] w=0.3701 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)E209.CB) [> 3.9458 = 6.5763 < 8.5492] w=0.3667 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)T33.CB) [> 3.9780 = 6.6300 < 8.6190] w=0.3656 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)I210.CB) [> 3.8086 = 6.3476 < 8.2519] w=0.3640 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)Q112.CB) [> 3.9251 = 6.5418 < 8.5043] w=0.3633 to align # Constraint # added constraint: constraint((T0325)T190.CB, (T0325)E242.CB) [> 3.8958 = 6.4929 < 8.4408] w=0.3626 to align # Constraint # added constraint: constraint((T0325)V132.CB, (T0325)N156.CB) [> 3.9790 = 6.6317 < 8.6212] w=0.3620 to align # Constraint # added constraint: constraint((T0325)D11.CB, (T0325)A37.CB) [> 3.9237 = 6.5395 < 8.5013] w=0.3571 to align # Constraint # added constraint: constraint((T0325)I24.CB, (T0325)S50.CB) [> 3.5779 = 5.9631 < 7.7521] w=0.3565 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)F208.CB) [> 4.1054 = 6.8424 < 8.8951] w=0.3564 to align # Constraint # added constraint: constraint((T0325)H129.CB, (T0325)N156.CB) [> 3.9958 = 6.6596 < 8.6575] w=0.3548 to align # Constraint # added constraint: constraint((T0325)T35.CB, (T0325)A51.CB) [> 3.3544 = 5.5907 < 7.2679] w=0.3507 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)V32.CB) [> 3.5065 = 5.8442 < 7.5975] w=0.3494 to align # Constraint # added constraint: constraint((T0325)M48.CB, (T0325)V62.CB) [> 3.9550 = 6.5916 < 8.5691] w=0.3489 to align # Constraint # added constraint: constraint((T0325)C212.CB, (T0325)E234.CB) [> 3.8116 = 6.3527 < 8.2585] w=0.3480 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)C212.CB) [> 3.3944 = 5.6573 < 7.3545] w=0.3456 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)S128.CB) [> 3.7865 = 6.3109 < 8.2041] w=0.3452 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)Q112.CB) [> 3.3012 = 5.5020 < 7.1526] w=0.3414 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)I23.CB) [> 4.0234 = 6.7057 < 8.7175] w=0.3384 to align # Constraint # added constraint: constraint((T0325)A59.CB, (T0325)P123.CB) [> 3.7407 = 6.2346 < 8.1049] w=0.3383 to align # Constraint # added constraint: constraint((T0325)P123.CB, (T0325)R155.CB) [> 3.8014 = 6.3357 < 8.2364] w=0.3382 to align # Constraint # added constraint: constraint((T0325)W109.CB, (T0325)L139.CB) [> 3.6520 = 6.0866 < 7.9126] w=0.3374 to align # Constraint # added constraint: constraint((T0325)I23.CB, (T0325)S54.CB) [> 4.1360 = 6.8932 < 8.9612] w=0.3369 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)I126.CB) [> 4.2126 = 7.0211 < 9.1274] w=0.3351 to align # Constraint # added constraint: constraint((T0325)V19.CB, (T0325)S50.CB) [> 4.2533 = 7.0887 < 9.2154] w=0.3351 to align # Constraint # added constraint: constraint((T0325)F208.CB, (T0325)L253.CB) [> 3.3671 = 5.6118 < 7.2953] w=0.3342 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)E234.CB) [> 3.3588 = 5.5980 < 7.2774] w=0.3333 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)T65.CB) [> 3.5373 = 5.8955 < 7.6641] w=0.3316 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)I210.CB) [> 4.1716 = 6.9527 < 9.0385] w=0.3308 to align # Constraint # added constraint: constraint((T0325)H129.CB, (T0325)A157.CB) [> 3.7379 = 6.2298 < 8.0988] w=0.3304 to align # Constraint # added constraint: constraint((T0325)D11.CB, (T0325)L38.CB) [> 4.0582 = 6.7636 < 8.7927] w=0.3295 to align # Constraint # added constraint: constraint((T0325)T20.CB, (T0325)A51.CB) [> 4.0472 = 6.7454 < 8.7690] w=0.3285 to align # Constraint # added constraint: constraint((T0325)S41.CB, (T0325)S115.CB) [> 3.6030 = 6.0050 < 7.8064] w=0.3284 to align # Constraint # added constraint: constraint((T0325)T35.CB, (T0325)H63.CB) [> 3.8037 = 6.3394 < 8.2413] w=0.3280 to align # Constraint # added constraint: constraint((T0325)T190.CB, (T0325)R233.CB) [> 3.2930 = 5.4883 < 7.1348] w=0.3253 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)A37.CB) [> 4.1410 = 6.9016 < 8.9721] w=0.3234 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)T36.CB) [> 3.7898 = 6.3163 < 8.2112] w=0.3227 to align # Constraint # added constraint: constraint((T0325)N131.CB, (T0325)A157.CB) [> 3.6564 = 6.0940 < 7.9222] w=0.3169 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)I60.CB) [> 4.0732 = 6.7887 < 8.8253] w=0.3154 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)D127.CB) [> 4.2235 = 7.0391 < 9.1508] w=0.3145 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)C212.CB) [> 3.9784 = 6.6306 < 8.6198] w=0.3077 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)D127.CB) [> 3.2749 = 5.4582 < 7.0957] w=0.3051 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)E209.CB) [> 3.4759 = 5.7932 < 7.5311] w=0.3046 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)A255.CB) [> 4.1937 = 6.9895 < 9.0864] w=0.3029 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)H125.CB) [> 3.7705 = 6.2841 < 8.1693] w=0.3023 to align # Constraint # added constraint: constraint((T0325)H27.CB, (T0325)P56.CB) [> 4.2049 = 7.0081 < 9.1105] w=0.3014 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)A59.CB) [> 3.7666 = 6.2777 < 8.1610] w=0.3012 to align # Constraint # added constraint: constraint((T0325)W109.CB, (T0325)Y150.CB) [> 4.0098 = 6.6830 < 8.6879] w=0.3008 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)I23.CB) [> 3.5859 = 5.9765 < 7.7695] w=0.2998 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)C212.CB) [> 3.8115 = 6.3526 < 8.2583] w=0.2990 to align # Constraint # added constraint: constraint((T0325)L194.CB, (T0325)R250.CB) [> 3.7152 = 6.1920 < 8.0496] w=0.2964 to align # Constraint # added constraint: constraint((T0325)H130.CB, (T0325)N156.CB) [> 3.8298 = 6.3829 < 8.2978] w=0.2957 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)C212.CB) [> 4.4497 = 7.4162 < 9.6411] w=0.2956 to align # Constraint # added constraint: constraint((T0325)A157.CB, (T0325)Y166.CB) [> 3.9399 = 6.5664 < 8.5363] w=0.2954 to align # Constraint # added constraint: constraint((T0325)I23.CB, (T0325)V32.CB) [> 3.6724 = 6.1207 < 7.9569] w=0.2946 to align # Constraint # added constraint: constraint((T0325)V235.CB, (T0325)K244.CB) [> 3.8358 = 6.3930 < 8.3110] w=0.2940 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)I210.CB) [> 3.8709 = 6.4514 < 8.3869] w=0.2932 to align # Constraint # added constraint: constraint((T0325)F208.CB, (T0325)I252.CB) [> 3.7709 = 6.2848 < 8.1703] w=0.2932 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)T20.CB) [> 4.1818 = 6.9697 < 9.0606] w=0.2928 to align # Constraint # added constraint: constraint((T0325)V132.CB, (T0325)A157.CB) [> 3.9258 = 6.5430 < 8.5059] w=0.2911 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)S128.CB) [> 3.6464 = 6.0774 < 7.9006] w=0.2906 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)T65.CB) [> 3.9846 = 6.6409 < 8.6332] w=0.2906 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)I60.CB) [> 3.7822 = 6.3038 < 8.1949] w=0.2885 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)G61.CA) [> 3.6894 = 6.1490 < 7.9937] w=0.2882 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)L254.CB) [> 3.4666 = 5.7777 < 7.5111] w=0.2864 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)T36.CB) [> 3.8870 = 6.4784 < 8.4219] w=0.2863 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)F208.CB) [> 3.3218 = 5.5364 < 7.1973] w=0.2862 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)S128.CB) [> 3.5246 = 5.8743 < 7.6366] w=0.2857 to align # Constraint # added constraint: constraint((T0325)E209.CB, (T0325)L253.CB) [> 3.4928 = 5.8214 < 7.5678] w=0.2856 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)H129.CB) [> 3.5401 = 5.9001 < 7.6702] w=0.2845 to align # Constraint # added constraint: constraint((T0325)H27.CB, (T0325)T57.CB) [> 4.0107 = 6.6845 < 8.6899] w=0.2843 to align # Constraint # added constraint: constraint((T0325)V19.CB, (T0325)P214.CB) [> 3.3785 = 5.6308 < 7.3200] w=0.2806 to align # Constraint # added constraint: constraint((T0325)I210.CB, (T0325)A255.CB) [> 3.8644 = 6.4406 < 8.3728] w=0.2803 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)E209.CB) [> 3.7528 = 6.2547 < 8.1311] w=0.2801 to align # Constraint # added constraint: constraint((T0325)I60.CB, (T0325)H125.CB) [> 4.2378 = 7.0630 < 9.1819] w=0.2799 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)S34.CB) [> 3.9247 = 6.5412 < 8.5036] w=0.2790 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)H129.CB) [> 3.8953 = 6.4922 < 8.4399] w=0.2766 to align # Constraint # added constraint: constraint((T0325)N211.CB, (T0325)A255.CB) [> 3.4171 = 5.6951 < 7.4036] w=0.2752 to align # Constraint # added constraint: constraint((T0325)I24.CB, (T0325)A51.CB) [> 3.9397 = 6.5663 < 8.5361] w=0.2740 to align # Constraint # added constraint: constraint((T0325)R155.CB, (T0325)F208.CB) [> 3.6779 = 6.1299 < 7.9689] w=0.2738 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)V32.CB) [> 4.0350 = 6.7251 < 8.7426] w=0.2736 to align # Constraint # added constraint: constraint((T0325)S41.CB, (T0325)E108.CB) [> 3.5291 = 5.8818 < 7.6464] w=0.2733 to align # Constraint # added constraint: constraint((T0325)F44.CB, (T0325)S115.CB) [> 3.7804 = 6.3007 < 8.1909] w=0.2721 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)A255.CB) [> 3.5254 = 5.8756 < 7.6383] w=0.2704 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)H213.CB) [> 3.8246 = 6.3743 < 8.2866] w=0.2687 to align # Constraint # added constraint: constraint((T0325)K5.CB, (T0325)E206.CB) [> 3.9534 = 6.5890 < 8.5657] w=0.2684 to align # Constraint # added constraint: constraint((T0325)K5.CB, (T0325)L254.CB) [> 4.2973 = 7.1622 < 9.3108] w=0.2678 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)L66.CB) [> 3.4322 = 5.7204 < 7.4365] w=0.2667 to align # Constraint # added constraint: constraint((T0325)H130.CB, (T0325)A157.CB) [> 3.4754 = 5.7924 < 7.5301] w=0.2666 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)N211.CB) [> 3.4045 = 5.6741 < 7.3763] w=0.2665 to align # Constraint # added constraint: constraint((T0325)V105.CB, (T0325)A143.CB) [> 3.6693 = 6.1155 < 7.9502] w=0.2662 to align # Constraint # added constraint: constraint((T0325)K28.CB, (T0325)P56.CB) [> 3.5297 = 5.8828 < 7.6477] w=0.2658 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)I210.CB) [> 3.6371 = 6.0619 < 7.8804] w=0.2648 to align # Constraint # added constraint: constraint((T0325)N131.CB, (T0325)N156.CB) [> 4.1469 = 6.9115 < 8.9850] w=0.2632 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)H129.CB) [> 3.8439 = 6.4065 < 8.3284] w=0.2624 to align # Constraint # added constraint: constraint((T0325)K5.CB, (T0325)L253.CB) [> 3.0642 = 5.1070 < 6.6391] w=0.2621 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)L254.CB) [> 4.4324 = 7.3873 < 9.6035] w=0.2621 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)V207.CB) [> 3.2123 = 5.3538 < 6.9599] w=0.2620 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)I247.CB) [> 3.8073 = 6.3454 < 8.2491] w=0.2612 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)T67.CB) [> 4.0582 = 6.7637 < 8.7928] w=0.2609 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)L144.CB) [> 3.8700 = 6.4501 < 8.3851] w=0.2604 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)A246.CB) [> 3.6287 = 6.0479 < 7.8622] w=0.2600 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)L66.CB) [> 3.6471 = 6.0784 < 7.9020] w=0.2595 to align # Constraint # added constraint: constraint((T0325)F208.CB, (T0325)L254.CB) [> 3.8548 = 6.4247 < 8.3521] w=0.2584 to align # Constraint # added constraint: constraint((T0325)A26.CB, (T0325)L58.CB) [> 4.3115 = 7.1859 < 9.3417] w=0.2570 to align # Constraint # added constraint: constraint((T0325)V201.CB, (T0325)A246.CB) [> 3.6433 = 6.0722 < 7.8939] w=0.2566 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)L254.CB) [> 3.5813 = 5.9688 < 7.7595] w=0.2565 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)E108.CB) [> 3.8740 = 6.4567 < 8.3937] w=0.2556 to align # Constraint # added constraint: constraint((T0325)A157.CB, (T0325)E209.CB) [> 3.6953 = 6.1588 < 8.0064] w=0.2555 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)Q112.CB) [> 4.3066 = 7.1776 < 9.3309] w=0.2544 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)V105.CB) [> 4.2525 = 7.0875 < 9.2137] w=0.2538 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)S128.CB) [> 4.1657 = 6.9428 < 9.0257] w=0.2517 to align # Constraint # added constraint: constraint((T0325)V105.CB, (T0325)L146.CB) [> 3.5206 = 5.8677 < 7.6280] w=0.2509 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)A255.CB) [> 4.2190 = 7.0316 < 9.1411] w=0.2501 to align # Constraint # added constraint: constraint((T0325)E209.CB, (T0325)I252.CB) [> 3.6563 = 6.0939 < 7.9220] w=0.2492 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)N156.CB) [> 3.8639 = 6.4399 < 8.3718] w=0.2491 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)H125.CB) [> 3.9852 = 6.6419 < 8.6345] w=0.2488 to align # Constraint # added constraint: constraint((T0325)N211.CB, (T0325)L254.CB) [> 4.3758 = 7.2929 < 9.4808] w=0.2483 to align # Constraint # added constraint: constraint((T0325)E209.CB, (T0325)L254.CB) [> 3.9745 = 6.6241 < 8.6114] w=0.2475 to align # Constraint # added constraint: constraint((T0325)K5.CB, (T0325)A255.CB) [> 3.1525 = 5.2541 < 6.8303] w=0.2445 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)Q112.CB) [> 3.7078 = 6.1796 < 8.0335] w=0.2443 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)L253.CB) [> 4.4254 = 7.3756 < 9.5883] w=0.2437 to align # Constraint # added constraint: constraint((T0325)K5.CB, (T0325)I252.CB) [> 4.0159 = 6.6932 < 8.7012] w=0.2437 to align # Constraint # added constraint: constraint((T0325)F44.CB, (T0325)E108.CB) [> 2.7956 = 4.6594 < 6.0572] w=0.2411 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)T67.CB) [> 3.7662 = 6.2771 < 8.1602] w=0.2408 to align # Constraint # added constraint: constraint((T0325)D11.CB, (T0325)N211.CB) [> 4.1251 = 6.8752 < 8.9378] w=0.2407 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)V19.CB) [> 3.3758 = 5.6264 < 7.3143] w=0.2407 to align # Constraint # added constraint: constraint((T0325)I161.CB, (T0325)L196.CB) [> 3.5391 = 5.8985 < 7.6681] w=0.2392 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)P73.CB) [> 3.8458 = 6.4096 < 8.3325] w=0.2383 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)L254.CB) [> 3.5398 = 5.8997 < 7.6696] w=0.2381 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)V207.CB) [> 4.4204 = 7.3673 < 9.5775] w=0.2381 to align # Constraint # added constraint: constraint((T0325)M117.CB, (T0325)A147.CB) [> 3.7620 = 6.2701 < 8.1511] w=0.2379 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)I210.CB) [> 4.1657 = 6.9429 < 9.0257] w=0.2372 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)V62.CB) [> 3.7852 = 6.3086 < 8.2012] w=0.2372 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)Q112.CB) [> 3.4505 = 5.7509 < 7.4761] w=0.2369 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)F208.CB) [> 3.4743 = 5.7905 < 7.5276] w=0.2365 to align # Constraint # added constraint: constraint((T0325)D11.CB, (T0325)A47.CB) [> 3.9074 = 6.5124 < 8.4661] w=0.2359 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)A47.CB) [> 3.7801 = 6.3002 < 8.1903] w=0.2354 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)P73.CB) [> 3.5626 = 5.9377 < 7.7190] w=0.2350 to align # Constraint # added constraint: constraint((T0325)G14.CA, (T0325)L38.CB) [> 3.3202 = 5.5337 < 7.1938] w=0.2348 to align # Constraint # added constraint: constraint((T0325)V201.CB, (T0325)R250.CB) [> 3.7092 = 6.1821 < 8.0367] w=0.2319 to align # Constraint # added constraint: constraint((T0325)V207.CB, (T0325)I252.CB) [> 3.7981 = 6.3302 < 8.2292] w=0.2314 to align # Constraint # added constraint: constraint((T0325)K5.CB, (T0325)A59.CB) [> 3.4912 = 5.8186 < 7.5642] w=0.2310 to align # Constraint # added constraint: constraint((T0325)L196.CB, (T0325)I210.CB) [> 4.0108 = 6.6846 < 8.6900] w=0.2310 to align # Constraint # added constraint: constraint((T0325)Q70.CB, (T0325)Q112.CB) [> 3.4067 = 5.6778 < 7.3811] w=0.2292 to align # Constraint # added constraint: constraint((T0325)T20.CB, (T0325)A55.CB) [> 3.6563 = 6.0938 < 7.9219] w=0.2290 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)L64.CB) [> 3.7281 = 6.2135 < 8.0776] w=0.2287 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)N211.CB) [> 3.8488 = 6.4146 < 8.3390] w=0.2281 to align # Constraint # added constraint: constraint((T0325)I210.CB, (T0325)E234.CB) [> 3.9112 = 6.5186 < 8.4742] w=0.2279 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)R231.CB) [> 3.8567 = 6.4279 < 8.3563] w=0.2277 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)L64.CB) [> 3.5907 = 5.9845 < 7.7799] w=0.2269 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)G61.CA) [> 3.5746 = 5.9577 < 7.7450] w=0.2264 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)A143.CB) [> 4.1746 = 6.9577 < 9.0450] w=0.2237 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)I237.CB) [> 3.1772 = 5.2953 < 6.8839] w=0.2231 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)F116.CB) [> 4.3172 = 7.1953 < 9.3539] w=0.2229 to align # Constraint # added constraint: constraint((T0325)V200.CB, (T0325)E209.CB) [> 3.6162 = 6.0270 < 7.8351] w=0.2225 to align # Constraint # added constraint: constraint((T0325)T20.CB, (T0325)T36.CB) [> 4.2606 = 7.1011 < 9.2314] w=0.2217 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)N211.CB) [> 4.0536 = 6.7561 < 8.7829] w=0.2204 to align # Constraint # added constraint: constraint((T0325)N131.CB, (T0325)S158.CB) [> 3.3809 = 5.6348 < 7.3252] w=0.2204 to align # Constraint # added constraint: constraint((T0325)V207.CB, (T0325)L253.CB) [> 3.5739 = 5.9565 < 7.7434] w=0.2193 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)A147.CB) [> 3.7764 = 6.2940 < 8.1822] w=0.2177 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)H130.CB) [> 3.8001 = 6.3335 < 8.2335] w=0.2177 to align # Constraint # added constraint: constraint((T0325)E209.CB, (T0325)A255.CB) [> 3.7800 = 6.2999 < 8.1899] w=0.2173 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)T65.CB) [> 3.5124 = 5.8540 < 7.6102] w=0.2168 to align # Constraint # added constraint: constraint((T0325)T16.CB, (T0325)T36.CB) [> 4.3199 = 7.1998 < 9.3597] w=0.2164 to align # Constraint # added constraint: constraint((T0325)G205.CA, (T0325)I252.CB) [> 4.1979 = 6.9964 < 9.0954] w=0.2156 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)T67.CB) [> 3.3918 = 5.6530 < 7.3489] w=0.2155 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)P214.CB) [> 2.7830 = 4.6383 < 6.0298] w=0.2152 to align # Constraint # added constraint: constraint((T0325)L167.CB, (T0325)M199.CB) [> 3.7954 = 6.3257 < 8.2235] w=0.2148 to align # Constraint # added constraint: constraint((T0325)I210.CB, (T0325)I247.CB) [> 3.9179 = 6.5299 < 8.4889] w=0.2144 to align # Constraint # added constraint: constraint((T0325)L140.CB, (T0325)M199.CB) [> 4.1234 = 6.8724 < 8.9341] w=0.2142 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)P81.CB) [> 3.4510 = 5.7517 < 7.4773] w=0.2137 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)I126.CB) [> 4.2735 = 7.1225 < 9.2593] w=0.2135 to align # Constraint # added constraint: constraint((T0325)A71.CB, (T0325)E108.CB) [> 3.9329 = 6.5548 < 8.5213] w=0.2132 to align # Constraint # added constraint: constraint((T0325)M179.CB, (T0325)I193.CB) [> 3.9294 = 6.5490 < 8.5137] w=0.2130 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)P39.CB) [> 3.4687 = 5.7812 < 7.5155] w=0.2120 to align # Constraint # added constraint: constraint((T0325)L75.CB, (T0325)E108.CB) [> 3.7209 = 6.2014 < 8.0619] w=0.2120 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)A71.CB) [> 3.9580 = 6.5966 < 8.5756] w=0.2116 to align # Constraint # added constraint: constraint((T0325)T16.CB, (T0325)A51.CB) [> 3.4009 = 5.6682 < 7.3686] w=0.2092 to align # Constraint # added constraint: constraint((T0325)D11.CB, (T0325)S50.CB) [> 4.1790 = 6.9651 < 9.0546] w=0.2092 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)T33.CB) [> 3.9957 = 6.6595 < 8.6573] w=0.2069 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)V207.CB) [> 4.0487 = 6.7478 < 8.7721] w=0.2063 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)E209.CB) [> 4.3564 = 7.2607 < 9.4389] w=0.2051 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)T67.CB) [> 3.5877 = 5.9795 < 7.7733] w=0.2051 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)R233.CB) [> 3.6922 = 6.1537 < 7.9998] w=0.2051 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)I210.CB) [> 3.5300 = 5.8833 < 7.6483] w=0.2048 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)L38.CB) [> 4.0258 = 6.7097 < 8.7226] w=0.2041 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)E108.CB) [> 2.9182 = 4.8637 < 6.3228] w=0.2040 to align # Constraint # added constraint: constraint((T0325)V32.CB, (T0325)A59.CB) [> 3.8971 = 6.4952 < 8.4438] w=0.2026 to align # Constraint # added constraint: constraint((T0325)L83.CB, (T0325)E108.CB) [> 4.0418 = 6.7363 < 8.7572] w=0.2008 to align # Constraint # added constraint: constraint((T0325)G30.CA, (T0325)K244.CB) [> 3.7291 = 6.2151 < 8.0797] w=0.1997 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)E108.CB) [> 3.9918 = 6.6530 < 8.6490] w=0.1971 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)I247.CB) [> 4.0862 = 6.8103 < 8.8534] w=0.1960 to align # Constraint # added constraint: constraint((T0325)V200.CB, (T0325)V243.CB) [> 4.1192 = 6.8654 < 8.9250] w=0.1958 to align # Constraint # added constraint: constraint((T0325)H130.CB, (T0325)L139.CB) [> 3.7416 = 6.2360 < 8.1068] w=0.1954 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)P230.CB) [> 3.3214 = 5.5356 < 7.1963] w=0.1952 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)A71.CB) [> 4.1535 = 6.9226 < 8.9993] w=0.1940 to align # Constraint # added constraint: constraint((T0325)L102.CB, (T0325)A145.CB) [> 3.9491 = 6.5819 < 8.5564] w=0.1934 to align # Constraint # added constraint: constraint((T0325)L180.CB, (T0325)I193.CB) [> 3.2986 = 5.4977 < 7.1470] w=0.1931 to align # Constraint # added constraint: constraint((T0325)E46.CB, (T0325)S119.CB) [> 4.5756 = 7.6260 < 9.9138] w=0.1920 to align # Constraint # added constraint: constraint((T0325)L180.CB, (T0325)N211.CB) [> 3.6744 = 6.1240 < 7.9613] w=0.1904 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)L139.CB) [> 3.3046 = 5.5077 < 7.1600] w=0.1901 to align # Constraint # added constraint: constraint((T0325)Y181.CB, (T0325)C212.CB) [> 3.6198 = 6.0329 < 7.8428] w=0.1900 to align # Constraint # added constraint: constraint((T0325)K4.CB, (T0325)L253.CB) [> 3.9151 = 6.5252 < 8.4827] w=0.1895 to align # Constraint # added constraint: constraint((T0325)K4.CB, (T0325)I252.CB) [> 2.9733 = 4.9555 < 6.4421] w=0.1895 to align # Constraint # added constraint: constraint((T0325)D177.CB, (T0325)I193.CB) [> 3.7673 = 6.2788 < 8.1625] w=0.1863 to align # Constraint # added constraint: constraint((T0325)Y15.CB, (T0325)A47.CB) [> 3.3834 = 5.6390 < 7.3307] w=0.1859 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)V80.CB) [> 3.8894 = 6.4823 < 8.4270] w=0.1859 to align # Constraint # added constraint: constraint((T0325)C212.CB, (T0325)N256.CB) [> 3.6846 = 6.1411 < 7.9834] w=0.1856 to align # Constraint # added constraint: constraint((T0325)F183.CB, (T0325)C212.CB) [> 3.7503 = 6.2506 < 8.1257] w=0.1856 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)G205.CA) [> 4.1350 = 6.8917 < 8.9592] w=0.1852 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)I74.CB) [> 4.1472 = 6.9120 < 8.9856] w=0.1851 to align # Constraint # added constraint: constraint((T0325)F216.CB, (T0325)Y227.CB) [> 3.9516 = 6.5861 < 8.5619] w=0.1847 to align # Constraint # added constraint: constraint((T0325)H213.CB, (T0325)R231.CB) [> 3.5289 = 5.8816 < 7.6460] w=0.1844 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)H213.CB) [> 3.7476 = 6.2460 < 8.1198] w=0.1839 to align # Constraint # added constraint: constraint((T0325)Y181.CB, (T0325)N211.CB) [> 3.9878 = 6.6464 < 8.6403] w=0.1837 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)I60.CB) [> 3.6158 = 6.0264 < 7.8343] w=0.1826 to align # Constraint # added constraint: constraint((T0325)H129.CB, (T0325)L139.CB) [> 3.5473 = 5.9121 < 7.6858] w=0.1823 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)T67.CB) [> 3.4600 = 5.7666 < 7.4966] w=0.1817 to align # Constraint # added constraint: constraint((T0325)L83.CB, (T0325)E104.CB) [> 3.8076 = 6.3460 < 8.2498] w=0.1813 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)R159.CB) [> 3.8393 = 6.3988 < 8.3185] w=0.1807 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)D185.CB) [> 3.9659 = 6.6098 < 8.5928] w=0.1801 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)E209.CB) [> 3.4495 = 5.7492 < 7.4740] w=0.1800 to align # Constraint # added constraint: constraint((T0325)G14.CA, (T0325)H63.CB) [> 4.5211 = 7.5352 < 9.7957] w=0.1796 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)E234.CB) [> 4.0257 = 6.7094 < 8.7223] w=0.1790 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)I126.CB) [> 3.8296 = 6.3827 < 8.2975] w=0.1786 to align # Constraint # added constraint: constraint((T0325)A215.CB, (T0325)R231.CB) [> 3.7021 = 6.1702 < 8.0212] w=0.1778 to align # Constraint # added constraint: constraint((T0325)F208.CB, (T0325)A255.CB) [> 3.8761 = 6.4602 < 8.3983] w=0.1775 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)H129.CB) [> 3.8449 = 6.4081 < 8.3305] w=0.1773 to align # Constraint # added constraint: constraint((T0325)I74.CB, (T0325)W91.CB) [> 3.8684 = 6.4473 < 8.3815] w=0.1755 to align # Constraint # added constraint: constraint((T0325)D11.CB, (T0325)H213.CB) [> 3.6105 = 6.0174 < 7.8227] w=0.1753 to align # Constraint # added constraint: constraint((T0325)L167.CB, (T0325)L196.CB) [> 3.6790 = 6.1317 < 7.9712] w=0.1748 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)L139.CB) [> 4.2341 = 7.0568 < 9.1739] w=0.1746 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)Y184.CB) [> 3.4074 = 5.6789 < 7.3826] w=0.1741 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)A59.CB) [> 4.3651 = 7.2752 < 9.4578] w=0.1734 to align # Constraint # added constraint: constraint((T0325)C212.CB, (T0325)Y257.CB) [> 3.6422 = 6.0703 < 7.8914] w=0.1732 to align # Constraint # added constraint: constraint((T0325)T175.CB, (T0325)I210.CB) [> 3.6270 = 6.0450 < 7.8584] w=0.1727 to align # Constraint # added constraint: constraint((T0325)N211.CB, (T0325)Y257.CB) [> 3.7903 = 6.3172 < 8.2124] w=0.1723 to align # Constraint # added constraint: constraint((T0325)F183.CB, (T0325)I193.CB) [> 3.7931 = 6.3218 < 8.2183] w=0.1719 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)P81.CB) [> 3.8903 = 6.4838 < 8.4290] w=0.1719 to align # Constraint # added constraint: constraint((T0325)C212.CB, (T0325)A255.CB) [> 3.9842 = 6.6403 < 8.6324] w=0.1712 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)T65.CB) [> 3.6083 = 6.0139 < 7.8180] w=0.1711 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)L66.CB) [> 3.0700 = 5.1167 < 6.6517] w=0.1708 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)M79.CB) [> 3.5296 = 5.8826 < 7.6474] w=0.1707 to align # Constraint # added constraint: constraint((T0325)H129.CB, (T0325)S158.CB) [> 3.6582 = 6.0971 < 7.9262] w=0.1705 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)L75.CB) [> 3.7504 = 6.2506 < 8.1258] w=0.1700 to align # Constraint # added constraint: constraint((T0325)K4.CB, (T0325)V32.CB) [> 3.2076 = 5.3460 < 6.9498] w=0.1696 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)V105.CB) [> 4.0805 = 6.8008 < 8.8410] w=0.1692 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)V173.CB) [> 3.5456 = 5.9094 < 7.6822] w=0.1692 to align # Constraint # added constraint: constraint((T0325)T175.CB, (T0325)N211.CB) [> 3.7583 = 6.2639 < 8.1431] w=0.1692 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)A37.CB) [> 3.9066 = 6.5111 < 8.4644] w=0.1685 to align # Constraint # added constraint: constraint((T0325)T16.CB, (T0325)P214.CB) [> 4.2294 = 7.0490 < 9.1638] w=0.1680 to align # Constraint # added constraint: constraint((T0325)K135.CB, (T0325)F183.CB) [> 3.8090 = 6.3484 < 8.2529] w=0.1676 to align # Constraint # added constraint: constraint((T0325)K4.CB, (T0325)G251.CA) [> 3.5306 = 5.8844 < 7.6497] w=0.1673 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)D127.CB) [> 4.1037 = 6.8394 < 8.8913] w=0.1672 to align # Constraint # added constraint: constraint((T0325)G14.CA, (T0325)Y43.CB) [> 3.3306 = 5.5511 < 7.2164] w=0.1667 to align # Constraint # added constraint: constraint((T0325)T219.CB, (T0325)R231.CB) [> 3.7113 = 6.1856 < 8.0412] w=0.1664 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)L64.CB) [> 4.1809 = 6.9681 < 9.0585] w=0.1648 to align # Constraint # added constraint: constraint((T0325)N211.CB, (T0325)N256.CB) [> 3.7978 = 6.3296 < 8.2285] w=0.1642 to align # Constraint # added constraint: constraint((T0325)S160.CB, (T0325)L196.CB) [> 3.7681 = 6.2802 < 8.1642] w=0.1638 to align # Constraint # added constraint: constraint((T0325)N131.CB, (T0325)R159.CB) [> 3.4348 = 5.7247 < 7.4421] w=0.1638 to align # Constraint # added constraint: constraint((T0325)V105.CB, (T0325)K138.CB) [> 3.5960 = 5.9933 < 7.7912] w=0.1637 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)R231.CB) [> 4.0733 = 6.7888 < 8.8254] w=0.1633 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)N211.CB) [> 3.8498 = 6.4164 < 8.3413] w=0.1629 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)V100.CB) [> 3.3890 = 5.6483 < 7.3428] w=0.1621 to align # Constraint # added constraint: constraint((T0325)G22.CA, (T0325)I232.CB) [> 3.3457 = 5.5762 < 7.2490] w=0.1620 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)D127.CB) [> 3.7468 = 6.2446 < 8.1180] w=0.1620 to align # Constraint # added constraint: constraint((T0325)A59.CB, (T0325)N256.CB) [> 2.7876 = 4.6460 < 6.0398] w=0.1618 to align # Constraint # added constraint: constraint((T0325)H130.CB, (T0325)S158.CB) [> 3.7918 = 6.3196 < 8.2155] w=0.1615 to align # Constraint # added constraint: constraint((T0325)L75.CB, (T0325)V100.CB) [> 3.5486 = 5.9143 < 7.6885] w=0.1611 to align # Constraint # added constraint: constraint((T0325)D11.CB, (T0325)C212.CB) [> 4.0940 = 6.8233 < 8.8703] w=0.1611 to align # Constraint # added constraint: constraint((T0325)G14.CA, (T0325)T36.CB) [> 4.1023 = 6.8371 < 8.8882] w=0.1611 to align # Constraint # added constraint: constraint((T0325)A26.CB, (T0325)T35.CB) [> 3.9708 = 6.6181 < 8.6035] w=0.1607 to align # Constraint # added constraint: constraint((T0325)H133.CB, (T0325)S160.CB) [> 3.9254 = 6.5424 < 8.5051] w=0.1606 to align # Constraint # added constraint: constraint((T0325)Y184.CB, (T0325)I193.CB) [> 3.7446 = 6.2409 < 8.1132] w=0.1604 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)L38.CB) [> 3.8135 = 6.3559 < 8.2627] w=0.1595 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)V207.CB) [> 3.1081 = 5.1802 < 6.7343] w=0.1594 to align # Constraint # added constraint: constraint((T0325)Q182.CB, (T0325)N211.CB) [> 3.7132 = 6.1887 < 8.0453] w=0.1586 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)A37.CB) [> 3.6982 = 6.1637 < 8.0128] w=0.1583 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)V105.CB) [> 4.1096 = 6.8493 < 8.9041] w=0.1582 to align # Constraint # added constraint: constraint((T0325)K4.CB, (T0325)V31.CB) [> 4.1300 = 6.8833 < 8.9483] w=0.1582 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)S203.CB) [> 3.6937 = 6.1561 < 8.0030] w=0.1580 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)A59.CB) [> 3.7220 = 6.2034 < 8.0644] w=0.1579 to align # Constraint # added constraint: constraint((T0325)Y15.CB, (T0325)Y43.CB) [> 3.9436 = 6.5726 < 8.5444] w=0.1578 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)K72.CB) [> 3.4085 = 5.6808 < 7.3850] w=0.1576 to align # Constraint # added constraint: constraint((T0325)Y15.CB, (T0325)F44.CB) [> 2.7350 = 4.5583 < 5.9258] w=0.1575 to align # Constraint # added constraint: constraint((T0325)C212.CB, (T0325)P230.CB) [> 3.5055 = 5.8425 < 7.5952] w=0.1573 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)N256.CB) [> 3.9708 = 6.6180 < 8.6033] w=0.1569 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)A47.CB) [> 3.9273 = 6.5455 < 8.5092] w=0.1563 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)N256.CB) [> 2.6700 = 4.4501 < 5.7851] w=0.1562 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)F183.CB) [> 3.8740 = 6.4566 < 8.3937] w=0.1546 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)L38.CB) [> 4.0089 = 6.6814 < 8.6859] w=0.1538 to align # Constraint # added constraint: constraint((T0325)L140.CB, (T0325)V207.CB) [> 3.2841 = 5.4736 < 7.1157] w=0.1534 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)D127.CB) [> 3.5227 = 5.8712 < 7.6325] w=0.1531 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)N211.CB) [> 3.7517 = 6.2529 < 8.1288] w=0.1528 to align # Constraint # added constraint: constraint((T0325)D11.CB, (T0325)H63.CB) [> 3.5595 = 5.9325 < 7.7122] w=0.1519 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)L66.CB) [> 3.8634 = 6.4390 < 8.3707] w=0.1518 to align # Constraint # added constraint: constraint((T0325)N3.CB, (T0325)E206.CB) [> 4.0438 = 6.7397 < 8.7617] w=0.1516 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)T65.CB) [> 3.9631 = 6.6052 < 8.5868] w=0.1501 to align # Constraint # added constraint: constraint((T0325)Y15.CB, (T0325)L38.CB) [> 3.5893 = 5.9822 < 7.7768] w=0.1495 to align # Constraint # added constraint: constraint((T0325)E162.CB, (T0325)I188.CB) [> 3.3583 = 5.5971 < 7.2762] w=0.1482 to align # Constraint # added constraint: constraint((T0325)D177.CB, (T0325)C212.CB) [> 3.3450 = 5.5750 < 7.2475] w=0.1482 to align # Constraint # added constraint: constraint((T0325)K4.CB, (T0325)G205.CA) [> 3.3431 = 5.5718 < 7.2433] w=0.1477 to align # Constraint # added constraint: constraint((T0325)I74.CB, (T0325)F90.CB) [> 3.4997 = 5.8328 < 7.5827] w=0.1474 to align # Constraint # added constraint: constraint((T0325)R233.CB, (T0325)E242.CB) [> 3.6999 = 6.1665 < 8.0164] w=0.1470 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)P39.CB) [> 4.3889 = 7.3148 < 9.5093] w=0.1468 to align # Constraint # added constraint: constraint((T0325)H133.CB, (T0325)Y166.CB) [> 3.8380 = 6.3967 < 8.3157] w=0.1465 to align # Constraint # added constraint: constraint((T0325)F183.CB, (T0325)P214.CB) [> 3.8455 = 6.4092 < 8.3320] w=0.1459 to align # Constraint # added constraint: constraint((T0325)L180.CB, (T0325)L196.CB) [> 4.0243 = 6.7071 < 8.7193] w=0.1458 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)I60.CB) [> 4.0406 = 6.7343 < 8.7546] w=0.1457 to align # Constraint # added constraint: constraint((T0325)S82.CB, (T0325)N136.CB) [> 3.9118 = 6.5198 < 8.4757] w=0.1451 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)V62.CB) [> 4.0064 = 6.6774 < 8.6806] w=0.1445 to align # Constraint # added constraint: constraint((T0325)G14.CA, (T0325)T40.CB) [> 2.9332 = 4.8887 < 6.3554] w=0.1445 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)L75.CB) [> 3.6417 = 6.0695 < 7.8904] w=0.1442 to align # Constraint # added constraint: constraint((T0325)R174.CB, (T0325)I210.CB) [> 4.0180 = 6.6967 < 8.7057] w=0.1441 to align # Constraint # added constraint: constraint((T0325)F216.CB, (T0325)G226.CA) [> 3.4513 = 5.7521 < 7.4778] w=0.1439 to align # Constraint # added constraint: constraint((T0325)L75.CB, (T0325)W91.CB) [> 3.0610 = 5.1017 < 6.6323] w=0.1437 to align # Constraint # added constraint: constraint((T0325)G14.CA, (T0325)P214.CB) [> 3.3605 = 5.6008 < 7.2810] w=0.1436 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)L146.CB) [> 4.0705 = 6.7842 < 8.8195] w=0.1434 to align # Constraint # added constraint: constraint((T0325)I217.CB, (T0325)V243.CB) [> 3.6255 = 6.0426 < 7.8553] w=0.1432 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)L64.CB) [> 3.6642 = 6.1071 < 7.9392] w=0.1432 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)N211.CB) [> 4.2406 = 7.0677 < 9.1880] w=0.1431 to align # Constraint # added constraint: constraint((T0325)L83.CB, (T0325)V100.CB) [> 3.7530 = 6.2550 < 8.1315] w=0.1428 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)Y257.CB) [> 3.6045 = 6.0076 < 7.8099] w=0.1424 to align # Constraint # added constraint: constraint((T0325)Y181.CB, (T0325)H213.CB) [> 3.7276 = 6.2127 < 8.0766] w=0.1422 to align # Constraint # added constraint: constraint((T0325)Q182.CB, (T0325)C212.CB) [> 3.9894 = 6.6491 < 8.6438] w=0.1419 to align # Constraint # added constraint: constraint((T0325)S41.CB, (T0325)A71.CB) [> 3.6843 = 6.1404 < 7.9826] w=0.1419 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)P214.CB) [> 4.0437 = 6.7396 < 8.7614] w=0.1415 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)I126.CB) [> 4.5806 = 7.6342 < 9.9245] w=0.1413 to align # Constraint # added constraint: constraint((T0325)T175.CB, (T0325)C212.CB) [> 3.4549 = 5.7582 < 7.4857] w=0.1411 to align # Constraint # added constraint: constraint((T0325)F216.CB, (T0325)C228.CB) [> 3.3065 = 5.5108 < 7.1641] w=0.1405 to align # Constraint # added constraint: constraint((T0325)Q21.CB, (T0325)S50.CB) [> 4.6497 = 7.7496 < 10.0744] w=0.1403 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)L83.CB) [> 4.1222 = 6.8704 < 8.9315] w=0.1400 to align # Constraint # added constraint: constraint((T0325)A26.CB, (T0325)I232.CB) [> 3.7869 = 6.3115 < 8.2050] w=0.1399 to align # Constraint # added constraint: constraint((T0325)K137.CB, (T0325)L169.CB) [> 3.6427 = 6.0711 < 7.8925] w=0.1389 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)H213.CB) [> 4.0858 = 6.8098 < 8.8527] w=0.1389 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)E108.CB) [> 4.0086 = 6.6809 < 8.6852] w=0.1385 to align # Constraint # added constraint: constraint((T0325)R174.CB, (T0325)L196.CB) [> 4.0110 = 6.6849 < 8.6904] w=0.1384 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)T36.CB) [> 3.7057 = 6.1761 < 8.0289] w=0.1383 to align # Constraint # added constraint: constraint((T0325)V132.CB, (T0325)R159.CB) [> 4.2216 = 7.0360 < 9.1468] w=0.1382 to align # Constraint # added constraint: constraint((T0325)Y15.CB, (T0325)T36.CB) [> 3.8507 = 6.4179 < 8.3433] w=0.1379 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)V105.CB) [> 3.6299 = 6.0498 < 7.8648] w=0.1376 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)D127.CB) [> 2.6212 = 4.3688 < 5.6794] w=0.1376 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)A37.CB) [> 3.4790 = 5.7983 < 7.5378] w=0.1372 to align # Constraint # added constraint: constraint((T0325)A26.CB, (T0325)V235.CB) [> 3.3796 = 5.6326 < 7.3224] w=0.1371 to align # Constraint # added constraint: constraint((T0325)P176.CB, (T0325)I193.CB) [> 4.0334 = 6.7224 < 8.7391] w=0.1368 to align # Constraint # added constraint: constraint((T0325)Y184.CB, (T0325)L196.CB) [> 4.1632 = 6.9387 < 9.0203] w=0.1366 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)T67.CB) [> 3.8393 = 6.3988 < 8.3184] w=0.1363 to align # Constraint # added constraint: constraint((T0325)L196.CB, (T0325)A246.CB) [> 4.1893 = 6.9822 < 9.0768] w=0.1362 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)P214.CB) [> 4.0636 = 6.7726 < 8.8044] w=0.1361 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)P76.CB) [> 3.9548 = 6.5914 < 8.5688] w=0.1358 to align # Constraint # added constraint: constraint((T0325)V105.CB, (T0325)N136.CB) [> 3.6860 = 6.1433 < 7.9863] w=0.1357 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)H130.CB) [> 4.2031 = 7.0052 < 9.1068] w=0.1356 to align # Constraint # added constraint: constraint((T0325)H213.CB, (T0325)Y257.CB) [> 3.5560 = 5.9266 < 7.7046] w=0.1355 to align # Constraint # added constraint: constraint((T0325)Q182.CB, (T0325)H213.CB) [> 3.3284 = 5.5474 < 7.2116] w=0.1354 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)Y257.CB) [> 4.2806 = 7.1343 < 9.2745] w=0.1350 to align # Constraint # added constraint: constraint((T0325)L167.CB, (T0325)V200.CB) [> 4.3949 = 7.3249 < 9.5224] w=0.1350 to align # Constraint # added constraint: constraint((T0325)R174.CB, (T0325)F208.CB) [> 3.7649 = 6.2748 < 8.1573] w=0.1346 to align # Constraint # added constraint: constraint((T0325)G141.CA, (T0325)S203.CB) [> 2.8281 = 4.7134 < 6.1275] w=0.1330 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)L144.CB) [> 3.9940 = 6.6567 < 8.6537] w=0.1330 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)A111.CB) [> 4.3940 = 7.3234 < 9.5204] w=0.1313 to align # Constraint # added constraint: constraint((T0325)M179.CB, (T0325)L196.CB) [> 3.8805 = 6.4675 < 8.4077] w=0.1310 to align # Constraint # added constraint: constraint((T0325)T163.CB, (T0325)L196.CB) [> 3.1617 = 5.2694 < 6.8503] w=0.1310 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)R250.CB) [> 4.1488 = 6.9147 < 8.9891] w=0.1309 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)E209.CB) [> 3.2116 = 5.3526 < 6.9584] w=0.1307 to align # Constraint # added constraint: constraint((T0325)D177.CB, (T0325)H213.CB) [> 3.6788 = 6.1313 < 7.9707] w=0.1303 to align # Constraint # added constraint: constraint((T0325)E209.CB, (T0325)Y257.CB) [> 3.7981 = 6.3302 < 8.2292] w=0.1300 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)N131.CB) [> 3.6351 = 6.0586 < 7.8762] w=0.1300 to align # Constraint # added constraint: constraint((T0325)S82.CB, (T0325)N101.CB) [> 3.9274 = 6.5457 < 8.5093] w=0.1299 to align # Constraint # added constraint: constraint((T0325)F183.CB, (T0325)V243.CB) [> 4.0926 = 6.8210 < 8.8673] w=0.1295 to align # Constraint # added constraint: constraint((T0325)P176.CB, (T0325)L196.CB) [> 3.8673 = 6.4455 < 8.3791] w=0.1292 to align # Constraint # added constraint: constraint((T0325)Y15.CB, (T0325)S41.CB) [> 4.1906 = 6.9843 < 9.0796] w=0.1283 to align # Constraint # added constraint: constraint((T0325)G14.CA, (T0325)A47.CB) [> 3.9619 = 6.6032 < 8.5842] w=0.1274 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)Y257.CB) [> 3.3051 = 5.5086 < 7.1611] w=0.1268 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)P73.CB) [> 4.2615 = 7.1025 < 9.2333] w=0.1245 to align # Constraint # added constraint: constraint((T0325)V173.CB, (T0325)I210.CB) [> 3.1605 = 5.2674 < 6.8477] w=0.1241 to align # Constraint # added constraint: constraint((T0325)L140.CB, (T0325)S203.CB) [> 2.6746 = 4.4577 < 5.7950] w=0.1238 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)I126.CB) [> 3.5515 = 5.9192 < 7.6949] w=0.1222 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)I126.CB) [> 4.0816 = 6.8027 < 8.8435] w=0.1222 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)P123.CB) [> 3.4191 = 5.6985 < 7.4080] w=0.1222 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)P123.CB) [> 3.5549 = 5.9248 < 7.7022] w=0.1222 to align # Constraint # added constraint: constraint((T0325)I74.CB, (T0325)H129.CB) [> 3.7242 = 6.2070 < 8.0691] w=0.1221 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)T36.CB) [> 4.2376 = 7.0626 < 9.1814] w=0.1216 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)L66.CB) [> 3.5662 = 5.9436 < 7.7267] w=0.1209 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)L66.CB) [> 4.1481 = 6.9135 < 8.9875] w=0.1208 to align # Constraint # added constraint: constraint((T0325)Y15.CB, (T0325)T40.CB) [> 3.8270 = 6.3783 < 8.2917] w=0.1206 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)V142.CB) [> 4.2285 = 7.0475 < 9.1617] w=0.1200 to align # Constraint # added constraint: constraint((T0325)L154.CB, (T0325)T175.CB) [> 3.6523 = 6.0872 < 7.9134] w=0.1188 to align # Constraint # added constraint: constraint((T0325)Y184.CB, (T0325)P214.CB) [> 3.9454 = 6.5756 < 8.5483] w=0.1185 to align # Constraint # added constraint: constraint((T0325)I217.CB, (T0325)M229.CB) [> 3.7499 = 6.2499 < 8.1248] w=0.1184 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)Q182.CB) [> 3.7946 = 6.3243 < 8.2216] w=0.1183 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)P39.CB) [> 3.7848 = 6.3080 < 8.2004] w=0.1179 to align # Constraint # added constraint: constraint((T0325)L75.CB, (T0325)V105.CB) [> 3.3545 = 5.5908 < 7.2680] w=0.1171 to align # Constraint # added constraint: constraint((T0325)G22.CA, (T0325)P214.CB) [> 4.2301 = 7.0501 < 9.1652] w=0.1168 to align # Constraint # added constraint: constraint((T0325)L75.CB, (T0325)H92.CB) [> 4.1210 = 6.8682 < 8.9287] w=0.1166 to align # Constraint # added constraint: constraint((T0325)T175.CB, (T0325)I193.CB) [> 3.2669 = 5.4449 < 7.0784] w=0.1163 to align # Constraint # added constraint: constraint((T0325)F208.CB, (T0325)R250.CB) [> 3.9031 = 6.5051 < 8.4567] w=0.1157 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)K72.CB) [> 3.9967 = 6.6611 < 8.6595] w=0.1154 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)V105.CB) [> 4.0903 = 6.8171 < 8.8622] w=0.1150 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)A47.CB) [> 3.8884 = 6.4806 < 8.4249] w=0.1150 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)V132.CB) [> 4.2833 = 7.1388 < 9.2804] w=0.1149 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)V132.CB) [> 4.2540 = 7.0899 < 9.2169] w=0.1145 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)Y166.CB) [> 3.7510 = 6.2517 < 8.1272] w=0.1143 to align # Constraint # added constraint: constraint((T0325)K72.CB, (T0325)H92.CB) [> 4.1330 = 6.8884 < 8.9549] w=0.1139 to align # Constraint # added constraint: constraint((T0325)P176.CB, (T0325)N211.CB) [> 3.8188 = 6.3646 < 8.2740] w=0.1139 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)V132.CB) [> 3.7591 = 6.2652 < 8.1447] w=0.1135 to align # Constraint # added constraint: constraint((T0325)P17.CB, (T0325)Y43.CB) [> 4.0748 = 6.7914 < 8.8288] w=0.1135 to align # Constraint # added constraint: constraint((T0325)M179.CB, (T0325)T192.CB) [> 3.4781 = 5.7968 < 7.5358] w=0.1122 to align # Constraint # added constraint: constraint((T0325)V173.CB, (T0325)N211.CB) [> 3.8706 = 6.4510 < 8.3863] w=0.1120 to align # Constraint # added constraint: constraint((T0325)I220.CB, (T0325)R233.CB) [> 3.7302 = 6.2169 < 8.0820] w=0.1116 to align # Constraint # added constraint: constraint((T0325)V173.CB, (T0325)V207.CB) [> 3.7625 = 6.2708 < 8.1520] w=0.1116 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)E209.CB) [> 4.2695 = 7.1158 < 9.2506] w=0.1115 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)T65.CB) [> 3.7444 = 6.2407 < 8.1130] w=0.1114 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)T65.CB) [> 3.6267 = 6.0444 < 7.8578] w=0.1114 to align # Constraint # added constraint: constraint((T0325)N3.CB, (T0325)V31.CB) [> 4.1863 = 6.9771 < 9.0702] w=0.1113 to align # Constraint # added constraint: constraint((T0325)V31.CB, (T0325)L58.CB) [> 4.0454 = 6.7424 < 8.7651] w=0.1113 to align # Constraint # added constraint: constraint((T0325)Y181.CB, (T0325)I210.CB) [> 3.5438 = 5.9064 < 7.6783] w=0.1112 to align # Constraint # added constraint: constraint((T0325)A215.CB, (T0325)E234.CB) [> 3.5802 = 5.9670 < 7.7571] w=0.1108 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)P214.CB) [> 3.8671 = 6.4451 < 8.3786] w=0.1103 to align # Constraint # added constraint: constraint((T0325)E178.CB, (T0325)E209.CB) [> 3.8821 = 6.4702 < 8.4113] w=0.1095 to align # Constraint # added constraint: constraint((T0325)T163.CB, (T0325)I217.CB) [> 3.4057 = 5.6761 < 7.3789] w=0.1095 to align # Constraint # added constraint: constraint((T0325)Q182.CB, (T0325)I193.CB) [> 3.8647 = 6.4412 < 8.3735] w=0.1092 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)V62.CB) [> 4.2913 = 7.1522 < 9.2978] w=0.1086 to align # Constraint # added constraint: constraint((T0325)A59.CB, (T0325)Y257.CB) [> 3.8411 = 6.4018 < 8.3223] w=0.1084 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)E209.CB) [> 4.0761 = 6.7935 < 8.8316] w=0.1084 to align # Constraint # added constraint: constraint((T0325)I161.CB, (T0325)I193.CB) [> 3.2679 = 5.4465 < 7.0805] w=0.1084 to align # Constraint # added constraint: constraint((T0325)I74.CB, (T0325)N131.CB) [> 3.6377 = 6.0629 < 7.8817] w=0.1081 to align # Constraint # added constraint: constraint((T0325)A215.CB, (T0325)M229.CB) [> 4.0781 = 6.7969 < 8.8360] w=0.1081 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)V62.CB) [> 4.3559 = 7.2598 < 9.4377] w=0.1078 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)E204.CB) [> 4.0615 = 6.7692 < 8.8000] w=0.1078 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)H63.CB) [> 4.3797 = 7.2994 < 9.4893] w=0.1074 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)S128.CB) [> 4.2686 = 7.1143 < 9.2486] w=0.1073 to align # Constraint # added constraint: constraint((T0325)I210.CB, (T0325)Y257.CB) [> 3.8229 = 6.3715 < 8.2829] w=0.1073 to align # Constraint # added constraint: constraint((T0325)S50.CB, (T0325)I60.CB) [> 4.0465 = 6.7442 < 8.7674] w=0.1073 to align # Constraint # added constraint: constraint((T0325)V19.CB, (T0325)M229.CB) [> 4.0471 = 6.7452 < 8.7688] w=0.1073 to align # Constraint # added constraint: constraint((T0325)E178.CB, (T0325)I193.CB) [> 3.8184 = 6.3640 < 8.2732] w=0.1069 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)H63.CB) [> 3.4950 = 5.8250 < 7.5725] w=0.1067 to align # Constraint # added constraint: constraint((T0325)I161.CB, (T0325)I188.CB) [> 3.6130 = 6.0217 < 7.8283] w=0.1064 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)L38.CB) [> 3.4170 = 5.6950 < 7.4035] w=0.1062 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)V235.CB) [> 3.2224 = 5.3707 < 6.9819] w=0.1061 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)Y43.CB) [> 3.4946 = 5.8244 < 7.5717] w=0.1057 to align # Constraint # added constraint: constraint((T0325)Y166.CB, (T0325)L196.CB) [> 3.9187 = 6.5311 < 8.4905] w=0.1055 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)H130.CB) [> 3.5041 = 5.8402 < 7.5923] w=0.1053 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)C228.CB) [> 3.6750 = 6.1249 < 7.9624] w=0.1052 to align # Constraint # added constraint: constraint((T0325)P176.CB, (T0325)T192.CB) [> 4.2499 = 7.0833 < 9.2082] w=0.1044 to align # Constraint # added constraint: constraint((T0325)K72.CB, (T0325)F90.CB) [> 4.0880 = 6.8133 < 8.8573] w=0.1037 to align # Constraint # added constraint: constraint((T0325)L68.CB, (T0325)H129.CB) [> 3.7535 = 6.2559 < 8.1326] w=0.1035 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)E108.CB) [> 4.3580 = 7.2634 < 9.4424] w=0.1034 to align # Constraint # added constraint: constraint((T0325)Y184.CB, (T0325)I217.CB) [> 3.7323 = 6.2205 < 8.0866] w=0.1032 to align # Constraint # added constraint: constraint((T0325)V105.CB, (T0325)S128.CB) [> 4.1680 = 6.9467 < 9.0307] w=0.1028 to align # Constraint # added constraint: constraint((T0325)H133.CB, (T0325)Y170.CB) [> 3.7838 = 6.3064 < 8.1983] w=0.1027 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)V62.CB) [> 3.0164 = 5.0274 < 6.5356] w=0.1025 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)I60.CB) [> 3.1537 = 5.2561 < 6.8329] w=0.1025 to align # Constraint # added constraint: constraint((T0325)L154.CB, (T0325)M179.CB) [> 3.9374 = 6.5624 < 8.5311] w=0.1022 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)V62.CB) [> 3.7866 = 6.3109 < 8.2042] w=0.1021 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)P230.CB) [> 3.4880 = 5.8134 < 7.5574] w=0.1020 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)L169.CB) [> 4.0437 = 6.7395 < 8.7613] w=0.0997 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)V62.CB) [> 4.2197 = 7.0328 < 9.1427] w=0.0995 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)S128.CB) [> 3.4753 = 5.7922 < 7.5299] w=0.0992 to align # Constraint # added constraint: constraint((T0325)L196.CB, (T0325)E209.CB) [> 3.3818 = 5.6364 < 7.3273] w=0.0990 to align # Constraint # added constraint: constraint((T0325)V32.CB, (T0325)A255.CB) [> 3.9187 = 6.5311 < 8.4905] w=0.0989 to align # Constraint # added constraint: constraint((T0325)V32.CB, (T0325)E248.CB) [> 4.4466 = 7.4110 < 9.6343] w=0.0989 to align # Constraint # added constraint: constraint((T0325)M179.CB, (T0325)I188.CB) [> 3.7799 = 6.2999 < 8.1898] w=0.0989 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)V200.CB) [> 2.7057 = 4.5095 < 5.8624] w=0.0981 to align # Constraint # added constraint: constraint((T0325)T16.CB, (T0325)A47.CB) [> 3.8684 = 6.4474 < 8.3816] w=0.0975 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)I126.CB) [> 4.2289 = 7.0482 < 9.1626] w=0.0974 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)T65.CB) [> 3.3877 = 5.6461 < 7.3399] w=0.0973 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)L66.CB) [> 4.2470 = 7.0783 < 9.2018] w=0.0973 to align # Constraint # added constraint: constraint((T0325)I74.CB, (T0325)H130.CB) [> 4.1392 = 6.8986 < 8.9682] w=0.0968 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)P73.CB) [> 3.9905 = 6.6509 < 8.6461] w=0.0965 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)A255.CB) [> 3.3709 = 5.6182 < 7.3037] w=0.0964 to align # Constraint # added constraint: constraint((T0325)M179.CB, (T0325)I210.CB) [> 3.9147 = 6.5245 < 8.4818] w=0.0963 to align # Constraint # added constraint: constraint((T0325)L68.CB, (T0325)N131.CB) [> 3.4515 = 5.7525 < 7.4782] w=0.0960 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)E108.CB) [> 3.7230 = 6.2051 < 8.0666] w=0.0956 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)V200.CB) [> 4.1201 = 6.8668 < 8.9268] w=0.0955 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)R159.CB) [> 4.0764 = 6.7939 < 8.8321] w=0.0951 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)T40.CB) [> 4.0779 = 6.7965 < 8.8354] w=0.0949 to align # Constraint # added constraint: constraint((T0325)D177.CB, (T0325)E234.CB) [> 3.7228 = 6.2047 < 8.0661] w=0.0945 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)I210.CB) [> 3.8678 = 6.4463 < 8.3802] w=0.0941 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)E209.CB) [> 3.6006 = 6.0010 < 7.8013] w=0.0936 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)H63.CB) [> 3.6527 = 6.0878 < 7.9142] w=0.0935 to align # Constraint # added constraint: constraint((T0325)P76.CB, (T0325)H130.CB) [> 3.8176 = 6.3627 < 8.2715] w=0.0929 to align # Constraint # added constraint: constraint((T0325)D177.CB, (T0325)P230.CB) [> 3.4311 = 5.7185 < 7.4341] w=0.0926 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)M229.CB) [> 3.2364 = 5.3939 < 7.0121] w=0.0924 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)V80.CB) [> 3.5030 = 5.8383 < 7.5898] w=0.0921 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)T33.CB) [> 3.8029 = 6.3382 < 8.2396] w=0.0917 to align # Constraint # added constraint: constraint((T0325)V173.CB, (T0325)L196.CB) [> 4.1493 = 6.9156 < 8.9902] w=0.0916 to align # Constraint # added constraint: constraint((T0325)T163.CB, (T0325)Q195.CB) [> 3.5993 = 5.9988 < 7.7985] w=0.0910 to align # Constraint # added constraint: constraint((T0325)E178.CB, (T0325)L196.CB) [> 3.3217 = 5.5362 < 7.1970] w=0.0906 to align # Constraint # added constraint: constraint((T0325)V132.CB, (T0325)L196.CB) [> 4.2822 = 7.1370 < 9.2781] w=0.0905 to align # Constraint # added constraint: constraint((T0325)E178.CB, (T0325)N211.CB) [> 3.5573 = 5.9289 < 7.7076] w=0.0904 to align # Constraint # added constraint: constraint((T0325)L180.CB, (T0325)C212.CB) [> 4.0601 = 6.7669 < 8.7969] w=0.0903 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)L75.CB) [> 4.1077 = 6.8463 < 8.9001] w=0.0902 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)G226.CA) [> 3.2964 = 5.4939 < 7.1421] w=0.0901 to align # Constraint # added constraint: constraint((T0325)N69.CB, (T0325)N131.CB) [> 4.2921 = 7.1535 < 9.2995] w=0.0901 to align # Constraint # added constraint: constraint((T0325)N3.CB, (T0325)V32.CB) [> 4.1991 = 6.9984 < 9.0980] w=0.0901 to align # Constraint # added constraint: constraint((T0325)H213.CB, (T0325)E234.CB) [> 3.4570 = 5.7616 < 7.4901] w=0.0899 to align # Constraint # added constraint: constraint((T0325)Q182.CB, (T0325)I210.CB) [> 4.0131 = 6.6884 < 8.6950] w=0.0895 to align # Constraint # added constraint: constraint((T0325)V80.CB, (T0325)E108.CB) [> 4.2739 = 7.1232 < 9.2602] w=0.0894 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)T67.CB) [> 3.6851 = 6.1418 < 7.9844] w=0.0892 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)E178.CB) [> 4.3212 = 7.2020 < 9.3627] w=0.0889 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)V62.CB) [> 3.4743 = 5.7904 < 7.5276] w=0.0884 to align # Constraint # added constraint: constraint((T0325)V105.CB, (T0325)I126.CB) [> 4.0378 = 6.7296 < 8.7485] w=0.0882 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)E209.CB) [> 3.7199 = 6.1998 < 8.0597] w=0.0880 to align # Constraint # added constraint: constraint((T0325)I220.CB, (T0325)P230.CB) [> 3.6388 = 6.0647 < 7.8841] w=0.0879 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)Y43.CB) [> 3.9526 = 6.5877 < 8.5639] w=0.0879 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)A47.CB) [> 3.6177 = 6.0294 < 7.8383] w=0.0879 to align # Constraint # added constraint: constraint((T0325)L75.CB, (T0325)Y89.CB) [> 3.2446 = 5.4077 < 7.0301] w=0.0864 to align # Constraint # added constraint: constraint((T0325)A215.CB, (T0325)N256.CB) [> 3.8808 = 6.4680 < 8.4085] w=0.0862 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)N211.CB) [> 4.2263 = 7.0438 < 9.1570] w=0.0861 to align # Constraint # added constraint: constraint((T0325)I60.CB, (T0325)I126.CB) [> 3.8106 = 6.3510 < 8.2563] w=0.0854 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)I95.CB) [> 3.7488 = 6.2480 < 8.1224] w=0.0848 to align # Constraint # added constraint: constraint((T0325)A215.CB, (T0325)C228.CB) [> 4.0692 = 6.7819 < 8.8165] w=0.0842 to align # Constraint # added constraint: constraint((T0325)M179.CB, (T0325)F208.CB) [> 3.3354 = 5.5591 < 7.2268] w=0.0842 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)I60.CB) [> 3.4743 = 5.7904 < 7.5275] w=0.0841 to align # Constraint # added constraint: constraint((T0325)H27.CB, (T0325)V235.CB) [> 4.5596 = 7.5993 < 9.8791] w=0.0836 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)L180.CB) [> 2.9494 = 4.9156 < 6.3903] w=0.0829 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)H213.CB) [> 4.0111 = 6.6852 < 8.6907] w=0.0816 to align # Constraint # added constraint: constraint((T0325)Q182.CB, (T0325)L196.CB) [> 3.7925 = 6.3208 < 8.2170] w=0.0814 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)L68.CB) [> 3.4117 = 5.6861 < 7.3920] w=0.0814 to align # Constraint # added constraint: constraint((T0325)N211.CB, (T0325)Q224.CB) [> 3.4009 = 5.6682 < 7.3686] w=0.0811 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)I210.CB) [> 4.3231 = 7.2051 < 9.3667] w=0.0808 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)L66.CB) [> 3.9473 = 6.5789 < 8.5526] w=0.0803 to align # Constraint # added constraint: constraint((T0325)E178.CB, (T0325)H213.CB) [> 3.4591 = 5.7651 < 7.4947] w=0.0803 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)A111.CB) [> 3.5020 = 5.8366 < 7.5876] w=0.0800 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)L68.CB) [> 3.3850 = 5.6416 < 7.3341] w=0.0799 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)D127.CB) [> 3.4124 = 5.6873 < 7.3935] w=0.0798 to align # Constraint # added constraint: constraint((T0325)L83.CB, (T0325)I95.CB) [> 3.3120 = 5.5201 < 7.1761] w=0.0797 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)Q182.CB) [> 4.0951 = 6.8252 < 8.8727] w=0.0794 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)V105.CB) [> 3.6864 = 6.1440 < 7.9872] w=0.0793 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)V62.CB) [> 4.3119 = 7.1865 < 9.3424] w=0.0791 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)L66.CB) [> 4.0568 = 6.7614 < 8.7898] w=0.0786 to align # Constraint # added constraint: constraint((T0325)E178.CB, (T0325)C228.CB) [> 4.5062 = 7.5104 < 9.7635] w=0.0782 to align # Constraint # added constraint: constraint((T0325)D177.CB, (T0325)C228.CB) [> 3.9393 = 6.5655 < 8.5351] w=0.0782 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)P39.CB) [> 2.6121 = 4.3535 < 5.6596] w=0.0777 to align # Constraint # added constraint: constraint((T0325)A215.CB, (T0325)Q224.CB) [> 3.6202 = 6.0337 < 7.8439] w=0.0774 to align # Constraint # added constraint: constraint((T0325)H213.CB, (T0325)A255.CB) [> 3.1129 = 5.1882 < 6.7446] w=0.0771 to align # Constraint # added constraint: constraint((T0325)R77.CB, (T0325)A87.CB) [> 3.0984 = 5.1641 < 6.7133] w=0.0765 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)N69.CB) [> 4.3147 = 7.1912 < 9.3485] w=0.0761 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)R233.CB) [> 3.9858 = 6.6430 < 8.6359] w=0.0757 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)I126.CB) [> 3.4368 = 5.7280 < 7.4464] w=0.0750 to align # Constraint # added constraint: constraint((T0325)G22.CA, (T0325)V32.CB) [> 3.9773 = 6.6288 < 8.6174] w=0.0748 to align # Constraint # added constraint: constraint((T0325)A59.CB, (T0325)G120.CA) [> 4.1235 = 6.8726 < 8.9343] w=0.0746 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)M179.CB) [> 3.6014 = 6.0024 < 7.8031] w=0.0738 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)I210.CB) [> 3.7132 = 6.1887 < 8.0453] w=0.0733 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)L196.CB) [> 3.8638 = 6.4397 < 8.3716] w=0.0732 to align # Constraint # added constraint: constraint((T0325)T219.CB, (T0325)R233.CB) [> 3.6496 = 6.0826 < 7.9074] w=0.0730 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)G22.CA) [> 4.0484 = 6.7473 < 8.7715] w=0.0730 to align # Constraint # added constraint: constraint((T0325)Y181.CB, (T0325)E209.CB) [> 3.8458 = 6.4096 < 8.3325] w=0.0728 to align # Constraint # added constraint: constraint((T0325)L68.CB, (T0325)E108.CB) [> 3.5112 = 5.8520 < 7.6077] w=0.0728 to align # Constraint # added constraint: constraint((T0325)A59.CB, (T0325)E258.CB) [> 3.7056 = 6.1760 < 8.0288] w=0.0727 to align # Constraint # added constraint: constraint((T0325)S41.CB, (T0325)A111.CB) [> 3.3081 = 5.5135 < 7.1676] w=0.0723 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)I60.CB) [> 4.1271 = 6.8784 < 8.9420] w=0.0723 to align # Constraint # added constraint: constraint((T0325)M179.CB, (T0325)F216.CB) [> 3.1006 = 5.1676 < 6.7179] w=0.0720 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)P76.CB) [> 3.4315 = 5.7192 < 7.4349] w=0.0712 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)D127.CB) [> 3.5862 = 5.9770 < 7.7701] w=0.0712 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)A47.CB) [> 3.3817 = 5.6361 < 7.3269] w=0.0703 to align # Constraint # added constraint: constraint((T0325)L75.CB, (T0325)S128.CB) [> 3.3137 = 5.5228 < 7.1796] w=0.0701 to align # Constraint # added constraint: constraint((T0325)D177.CB, (T0325)N211.CB) [> 3.8973 = 6.4955 < 8.4441] w=0.0699 to align # Constraint # added constraint: constraint((T0325)G22.CA, (T0325)V235.CB) [> 3.4039 = 5.6732 < 7.3751] w=0.0698 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)L68.CB) [> 2.8495 = 4.7492 < 6.1740] w=0.0694 to align # Constraint # added constraint: constraint((T0325)F90.CB, (T0325)V105.CB) [> 3.8589 = 6.4316 < 8.3611] w=0.0690 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)N211.CB) [> 4.4334 = 7.3891 < 9.6058] w=0.0689 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)S128.CB) [> 3.3950 = 5.6583 < 7.3558] w=0.0689 to align # Constraint # added constraint: constraint((T0325)R77.CB, (T0325)G134.CA) [> 3.5083 = 5.8472 < 7.6014] w=0.0688 to align # Constraint # added constraint: constraint((T0325)S41.CB, (T0325)W91.CB) [> 3.4921 = 5.8202 < 7.5663] w=0.0688 to align # Constraint # added constraint: constraint((T0325)A215.CB, (T0325)R233.CB) [> 4.2730 = 7.1216 < 9.2581] w=0.0686 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)N156.CB) [> 3.7994 = 6.3323 < 8.2320] w=0.0685 to align # Constraint # added constraint: constraint((T0325)A26.CB, (T0325)E236.CB) [> 3.8228 = 6.3713 < 8.2827] w=0.0685 to align # Constraint # added constraint: constraint((T0325)E178.CB, (T0325)I210.CB) [> 4.2954 = 7.1589 < 9.3066] w=0.0682 to align # Constraint # added constraint: constraint((T0325)G22.CA, (T0325)D127.CB) [> 4.0690 = 6.7816 < 8.8161] w=0.0681 to align # Constraint # added constraint: constraint((T0325)D218.CB, (T0325)I232.CB) [> 3.7929 = 6.3215 < 8.2179] w=0.0681 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)S128.CB) [> 3.6963 = 6.1606 < 8.0087] w=0.0678 to align # Constraint # added constraint: constraint((T0325)L68.CB, (T0325)V132.CB) [> 4.0508 = 6.7514 < 8.7768] w=0.0677 to align # Constraint # added constraint: constraint((T0325)M179.CB, (T0325)E209.CB) [> 3.8448 = 6.4080 < 8.3305] w=0.0674 to align # Constraint # added constraint: constraint((T0325)L180.CB, (T0325)H213.CB) [> 2.8498 = 4.7497 < 6.1746] w=0.0673 to align # Constraint # added constraint: constraint((T0325)G22.CA, (T0325)T33.CB) [> 4.4349 = 7.3914 < 9.6088] w=0.0668 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)E108.CB) [> 4.0311 = 6.7185 < 8.7340] w=0.0668 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)V207.CB) [> 3.8200 = 6.3667 < 8.2767] w=0.0667 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)L64.CB) [> 4.2832 = 7.1387 < 9.2803] w=0.0666 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)G30.CA) [> 3.7642 = 6.2737 < 8.1558] w=0.0659 to align # Constraint # added constraint: constraint((T0325)L221.CB, (T0325)V243.CB) [> 3.3378 = 5.5630 < 7.2320] w=0.0656 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)L238.CB) [> 3.6624 = 6.1040 < 7.9352] w=0.0655 to align # Constraint # added constraint: constraint((T0325)F216.CB, (T0325)V235.CB) [> 3.9378 = 6.5630 < 8.5319] w=0.0652 to align # Constraint # added constraint: constraint((T0325)I210.CB, (T0325)V235.CB) [> 4.0588 = 6.7646 < 8.7940] w=0.0648 to align # Constraint # added constraint: constraint((T0325)C212.CB, (T0325)I237.CB) [> 4.2880 = 7.1466 < 9.2906] w=0.0646 to align # Constraint # added constraint: constraint((T0325)L221.CB, (T0325)P230.CB) [> 3.8826 = 6.4709 < 8.4122] w=0.0644 to align # Constraint # added constraint: constraint((T0325)D177.CB, (T0325)G226.CA) [> 4.1793 = 6.9655 < 9.0551] w=0.0642 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)V62.CB) [> 3.8798 = 6.4663 < 8.4062] w=0.0641 to align # Constraint # added constraint: constraint((T0325)T163.CB, (T0325)P214.CB) [> 2.5413 = 4.2355 < 5.5062] w=0.0639 to align # Constraint # added constraint: constraint((T0325)H213.CB, (T0325)I237.CB) [> 3.6774 = 6.1291 < 7.9678] w=0.0638 to align # Constraint # added constraint: constraint((T0325)L68.CB, (T0325)D127.CB) [> 4.2720 = 7.1201 < 9.2561] w=0.0636 to align # Constraint # added constraint: constraint((T0325)A215.CB, (T0325)S259.CB) [> 3.7004 = 6.1673 < 8.0175] w=0.0625 to align # Constraint # added constraint: constraint((T0325)L180.CB, (T0325)I210.CB) [> 4.1917 = 6.9861 < 9.0820] w=0.0624 to align # Constraint # added constraint: constraint((T0325)L180.CB, (T0325)E209.CB) [> 3.4222 = 5.7037 < 7.4148] w=0.0624 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)N211.CB) [> 4.3594 = 7.2656 < 9.4453] w=0.0612 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)N211.CB) [> 3.9724 = 6.6206 < 8.6068] w=0.0611 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)C212.CB) [> 3.9584 = 6.5973 < 8.5765] w=0.0610 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)P73.CB) [> 4.4023 = 7.3371 < 9.5383] w=0.0604 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)I74.CB) [> 4.1233 = 6.8721 < 8.9337] w=0.0604 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)R159.CB) [> 3.9280 = 6.5466 < 8.5106] w=0.0602 to align # Constraint # added constraint: constraint((T0325)Y227.CB, (T0325)E236.CB) [> 3.0219 = 5.0364 < 6.5473] w=0.0600 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)P214.CB) [> 4.0239 = 6.7065 < 8.7185] w=0.0592 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)A47.CB) [> 4.3320 = 7.2201 < 9.3861] w=0.0590 to align # Constraint # added constraint: constraint((T0325)G14.CA, (T0325)H213.CB) [> 3.7413 = 6.2354 < 8.1061] w=0.0590 to align # Constraint # added constraint: constraint((T0325)D177.CB, (T0325)E209.CB) [> 4.3109 = 7.1849 < 9.3403] w=0.0587 to align # Constraint # added constraint: constraint((T0325)N211.CB, (T0325)E234.CB) [> 4.0042 = 6.6737 < 8.6758] w=0.0587 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)N211.CB) [> 3.4794 = 5.7990 < 7.5387] w=0.0579 to align # Constraint # added constraint: constraint((T0325)P230.CB, (T0325)T239.CB) [> 2.9814 = 4.9689 < 6.4596] w=0.0578 to align # Constraint # added constraint: constraint((T0325)M229.CB, (T0325)S240.CB) [> 4.4304 = 7.3840 < 9.5992] w=0.0578 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)L144.CB) [> 3.8530 = 6.4216 < 8.3481] w=0.0571 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)D177.CB) [> 4.0778 = 6.7963 < 8.8352] w=0.0566 to align # Constraint # added constraint: constraint((T0325)N211.CB, (T0325)C228.CB) [> 3.2390 = 5.3984 < 7.0179] w=0.0565 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)L66.CB) [> 4.2180 = 7.0300 < 9.1390] w=0.0564 to align # Constraint # added constraint: constraint((T0325)H213.CB, (T0325)M229.CB) [> 4.4519 = 7.4198 < 9.6458] w=0.0563 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)Y227.CB) [> 3.8578 = 6.4297 < 8.3586] w=0.0555 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)I126.CB) [> 3.5930 = 5.9883 < 7.7848] w=0.0554 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)L238.CB) [> 3.8956 = 6.4927 < 8.4404] w=0.0546 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)A47.CB) [> 2.9481 = 4.9135 < 6.3875] w=0.0544 to align # Constraint # added constraint: constraint((T0325)Y181.CB, (T0325)P214.CB) [> 3.6721 = 6.1201 < 7.9562] w=0.0544 to align # Constraint # added constraint: constraint((T0325)L180.CB, (T0325)P214.CB) [> 3.0065 = 5.0108 < 6.5141] w=0.0544 to align # Constraint # added constraint: constraint((T0325)M199.CB, (T0325)T239.CB) [> 4.2805 = 7.1342 < 9.2744] w=0.0539 to align # Constraint # added constraint: constraint((T0325)A59.CB, (T0325)I126.CB) [> 4.2914 = 7.1523 < 9.2979] w=0.0533 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)Y89.CB) [> 3.6821 = 6.1369 < 7.9780] w=0.0533 to align # Constraint # added constraint: constraint((T0325)Y181.CB, (T0325)L196.CB) [> 3.9803 = 6.6339 < 8.6241] w=0.0527 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)A59.CB) [> 4.1678 = 6.9464 < 9.0303] w=0.0526 to align # Constraint # added constraint: constraint((T0325)L196.CB, (T0325)C212.CB) [> 4.7087 = 7.8478 < 10.2021] w=0.0525 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)H63.CB) [> 3.0497 = 5.0828 < 6.6076] w=0.0520 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)V84.CB) [> 3.6058 = 6.0097 < 7.8127] w=0.0518 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)H213.CB) [> 4.2382 = 7.0636 < 9.1827] w=0.0515 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)I237.CB) [> 3.4014 = 5.6691 < 7.3698] w=0.0511 to align # Constraint # added constraint: constraint((T0325)Y181.CB, (T0325)I193.CB) [> 3.7189 = 6.1982 < 8.0577] w=0.0509 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)M229.CB) [> 4.1926 = 6.9876 < 9.0839] w=0.0509 to align # Constraint # added constraint: constraint((T0325)D218.CB, (T0325)S240.CB) [> 3.8299 = 6.3832 < 8.2981] w=0.0492 to align # Constraint # added constraint: constraint((T0325)I193.CB, (T0325)H213.CB) [> 4.5452 = 7.5753 < 9.8479] w=0.0490 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)C212.CB) [> 3.0231 = 5.0386 < 6.5501] w=0.0488 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)S128.CB) [> 3.9773 = 6.6289 < 8.6175] w=0.0486 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)L238.CB) [> 4.5534 = 7.5890 < 9.8656] w=0.0484 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)V84.CB) [> 3.1652 = 5.2753 < 6.8579] w=0.0479 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)H213.CB) [> 4.3954 = 7.3257 < 9.5233] w=0.0473 to align # Constraint # added constraint: constraint((T0325)S2.CB, (T0325)I252.CB) [> 4.2511 = 7.0852 < 9.2107] w=0.0471 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)I126.CB) [> 4.6901 = 7.8168 < 10.1618] w=0.0461 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)V105.CB) [> 3.0750 = 5.1250 < 6.6625] w=0.0459 to align # Constraint # added constraint: constraint((T0325)Y89.CB, (T0325)Y181.CB) [> 3.9325 = 6.5542 < 8.5204] w=0.0456 to align # Constraint # added constraint: constraint((T0325)R29.CB, (T0325)T57.CB) [> 4.7306 = 7.8843 < 10.2496] w=0.0456 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)A215.CB) [> 4.0465 = 6.7441 < 8.7673] w=0.0454 to align # Constraint # added constraint: constraint((T0325)L196.CB, (T0325)I237.CB) [> 2.8830 = 4.8050 < 6.2465] w=0.0454 to align # Constraint # added constraint: constraint((T0325)E209.CB, (T0325)Y227.CB) [> 4.5660 = 7.6100 < 9.8930] w=0.0453 to align # Constraint # added constraint: constraint((T0325)I220.CB, (T0325)T239.CB) [> 3.3700 = 5.6166 < 7.3016] w=0.0447 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)N211.CB) [> 2.7753 = 4.6255 < 6.0131] w=0.0445 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)N211.CB) [> 4.6839 = 7.8065 < 10.1484] w=0.0445 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)E209.CB) [> 4.2986 = 7.1643 < 9.3135] w=0.0445 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)D127.CB) [> 4.2667 = 7.1111 < 9.2444] w=0.0444 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)D127.CB) [> 3.6343 = 6.0571 < 7.8743] w=0.0444 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)N211.CB) [> 4.4552 = 7.4254 < 9.6530] w=0.0438 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)H213.CB) [> 4.3257 = 7.2096 < 9.3724] w=0.0438 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)P214.CB) [> 4.0406 = 6.7343 < 8.7546] w=0.0436 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)L196.CB) [> 3.8691 = 6.4486 < 8.3831] w=0.0433 to align # Constraint # added constraint: constraint((T0325)L221.CB, (T0325)I232.CB) [> 2.5949 = 4.3248 < 5.6222] w=0.0433 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)F90.CB) [> 3.7512 = 6.2520 < 8.1277] w=0.0428 to align # Constraint # added constraint: constraint((T0325)Y170.CB, (T0325)H213.CB) [> 2.9677 = 4.9461 < 6.4299] w=0.0427 to align # Constraint # added constraint: constraint((T0325)L196.CB, (T0325)N211.CB) [> 4.1464 = 6.9107 < 8.9839] w=0.0424 to align # Constraint # added constraint: constraint((T0325)C212.CB, (T0325)L260.CB) [> 3.6215 = 6.0358 < 7.8466] w=0.0418 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)C212.CB) [> 3.7022 = 6.1703 < 8.0214] w=0.0408 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)P214.CB) [> 4.5043 = 7.5071 < 9.7593] w=0.0408 to align # Constraint # added constraint: constraint((T0325)H130.CB, (T0325)Y170.CB) [> 3.8938 = 6.4896 < 8.4365] w=0.0402 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)I193.CB) [> 4.1657 = 6.9429 < 9.0258] w=0.0398 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)L75.CB) [> 2.2762 = 3.7937 < 4.9319] w=0.0397 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)E108.CB) [> 3.3974 = 5.6624 < 7.3611] w=0.0396 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)I210.CB) [> 4.2723 = 7.1204 < 9.2565] w=0.0392 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)L196.CB) [> 4.0529 = 6.7548 < 8.7812] w=0.0384 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)I60.CB) [> 3.6633 = 6.1055 < 7.9372] w=0.0383 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)H63.CB) [> 4.3685 = 7.2809 < 9.4651] w=0.0368 to align # Constraint # added constraint: constraint((T0325)I60.CB, (T0325)D127.CB) [> 3.8060 = 6.3434 < 8.2464] w=0.0364 to align # Constraint # added constraint: constraint((T0325)A18.CB, (T0325)R29.CB) [> 4.0608 = 6.7680 < 8.7984] w=0.0363 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)S128.CB) [> 3.6016 = 6.0027 < 7.8035] w=0.0362 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)P73.CB) [> 3.1613 = 5.2688 < 6.8494] w=0.0362 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)H63.CB) [> 4.0227 = 6.7045 < 8.7158] w=0.0360 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)N156.CB) [> 3.4464 = 5.7441 < 7.4673] w=0.0360 to align # Constraint # added constraint: constraint((T0325)E25.CB, (T0325)L238.CB) [> 2.4143 = 4.0239 < 5.2311] w=0.0360 to align # Constraint # added constraint: constraint((T0325)V80.CB, (T0325)F96.CB) [> 4.0486 = 6.7477 < 8.7720] w=0.0356 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)D127.CB) [> 2.8999 = 4.8332 < 6.2832] w=0.0355 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)R159.CB) [> 3.8588 = 6.4314 < 8.3608] w=0.0353 to align # Constraint # added constraint: constraint((T0325)L75.CB, (T0325)F90.CB) [> 2.8847 = 4.8078 < 6.2502] w=0.0353 to align # Constraint # added constraint: constraint((T0325)F44.CB, (T0325)V84.CB) [> 4.0622 = 6.7704 < 8.8015] w=0.0353 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)T36.CB) [> 4.3453 = 7.2421 < 9.4148] w=0.0352 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)L38.CB) [> 3.7106 = 6.1844 < 8.0397] w=0.0352 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)L38.CB) [> 4.3571 = 7.2618 < 9.4404] w=0.0352 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)F96.CB) [> 4.5091 = 7.5152 < 9.7697] w=0.0352 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)Y170.CB) [> 4.4568 = 7.4280 < 9.6564] w=0.0351 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)L196.CB) [> 4.2516 = 7.0861 < 9.2119] w=0.0347 to align # Constraint # added constraint: constraint((T0325)I217.CB, (T0325)L260.CB) [> 4.4873 = 7.4789 < 9.7226] w=0.0347 to align # Constraint # added constraint: constraint((T0325)A215.CB, (T0325)L260.CB) [> 2.9491 = 4.9151 < 6.3896] w=0.0347 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)L260.CB) [> 2.6604 = 4.4341 < 5.7643] w=0.0347 to align # Constraint # added constraint: constraint((T0325)P214.CB, (T0325)S259.CB) [> 4.4959 = 7.4932 < 9.7411] w=0.0347 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)H213.CB) [> 4.4905 = 7.4842 < 9.7294] w=0.0346 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)L64.CB) [> 4.1600 = 6.9333 < 9.0133] w=0.0343 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)L66.CB) [> 4.5462 = 7.5770 < 9.8501] w=0.0341 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)E209.CB) [> 3.8624 = 6.4373 < 8.3685] w=0.0338 to align # Constraint # added constraint: constraint((T0325)I210.CB, (T0325)L260.CB) [> 4.3909 = 7.3182 < 9.5136] w=0.0335 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)T67.CB) [> 3.9253 = 6.5422 < 8.5048] w=0.0335 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)D127.CB) [> 4.7026 = 7.8377 < 10.1890] w=0.0334 to align # Constraint # added constraint: constraint((T0325)F90.CB, (T0325)E108.CB) [> 3.6237 = 6.0396 < 7.8515] w=0.0332 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)T40.CB) [> 4.5018 = 7.5030 < 9.7539] w=0.0330 to align # Constraint # added constraint: constraint((T0325)E25.CB, (T0325)Y227.CB) [> 4.2265 = 7.0441 < 9.1574] w=0.0328 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)C212.CB) [> 3.5776 = 5.9626 < 7.7514] w=0.0325 to align # Constraint # added constraint: constraint((T0325)A215.CB, (T0325)I237.CB) [> 3.0305 = 5.0509 < 6.5662] w=0.0325 to align # Constraint # added constraint: constraint((T0325)L196.CB, (T0325)L238.CB) [> 4.6788 = 7.7980 < 10.1374] w=0.0324 to align # Constraint # added constraint: constraint((T0325)N156.CB, (T0325)H213.CB) [> 3.3094 = 5.5157 < 7.1704] w=0.0320 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)P214.CB) [> 4.2939 = 7.1566 < 9.3035] w=0.0318 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)N156.CB) [> 4.6461 = 7.7436 < 10.0666] w=0.0316 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)C212.CB) [> 4.5046 = 7.5077 < 9.7600] w=0.0315 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)L64.CB) [> 4.1290 = 6.8816 < 8.9461] w=0.0313 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)H63.CB) [> 4.4705 = 7.4508 < 9.6860] w=0.0311 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)H63.CB) [> 3.4658 = 5.7764 < 7.5093] w=0.0311 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)H63.CB) [> 3.8486 = 6.4144 < 8.3387] w=0.0311 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)S128.CB) [> 3.3589 = 5.5982 < 7.2776] w=0.0306 to align # Constraint # added constraint: constraint((T0325)Y181.CB, (T0325)G226.CA) [> 4.4439 = 7.4064 < 9.6284] w=0.0305 to align # Constraint # added constraint: constraint((T0325)P42.CB, (T0325)T65.CB) [> 4.5408 = 7.5679 < 9.8383] w=0.0296 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)N211.CB) [> 3.6531 = 6.0885 < 7.9150] w=0.0296 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)I210.CB) [> 3.4249 = 5.7083 < 7.4207] w=0.0296 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)I193.CB) [> 3.9354 = 6.5590 < 8.5266] w=0.0296 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)L196.CB) [> 4.6958 = 7.8263 < 10.1741] w=0.0296 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)I210.CB) [> 3.8573 = 6.4288 < 8.3574] w=0.0295 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)E209.CB) [> 4.5507 = 7.5845 < 9.8599] w=0.0294 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)C212.CB) [> 4.1233 = 6.8721 < 8.9337] w=0.0293 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)I193.CB) [> 2.8745 = 4.7909 < 6.2281] w=0.0292 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)T65.CB) [> 4.0418 = 6.7364 < 8.7573] w=0.0290 to align # Constraint # added constraint: constraint((T0325)L75.CB, (T0325)R159.CB) [> 3.6463 = 6.0771 < 7.9003] w=0.0287 to align # Constraint # added constraint: constraint((T0325)S2.CB, (T0325)A59.CB) [> 4.7057 = 7.8428 < 10.1957] w=0.0283 to align # Constraint # added constraint: constraint((T0325)S2.CB, (T0325)I60.CB) [> 3.3063 = 5.5105 < 7.1636] w=0.0283 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)T40.CB) [> 4.4141 = 7.3568 < 9.5638] w=0.0283 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)P73.CB) [> 4.2834 = 7.1390 < 9.2807] w=0.0283 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)A59.CB) [> 4.3984 = 7.3306 < 9.5298] w=0.0283 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)I60.CB) [> 3.9494 = 6.5823 < 8.5570] w=0.0252 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)A59.CB) [> 4.4430 = 7.4050 < 9.6265] w=0.0249 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)R159.CB) [> 4.5703 = 7.6172 < 9.9024] w=0.0246 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)R159.CB) [> 3.2940 = 5.4901 < 7.1371] w=0.0246 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)R159.CB) [> 4.6723 = 7.7872 < 10.1233] w=0.0242 to align # Constraint # added constraint: constraint((T0325)L64.CB, (T0325)N156.CB) [> 4.0541 = 6.7569 < 8.7840] w=0.0241 to align # Constraint # added constraint: constraint((T0325)R159.CB, (T0325)C202.CB) [> 2.9313 = 4.8855 < 6.3512] w=0.0241 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)L75.CB) [> 3.7796 = 6.2994 < 8.1892] w=0.0238 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)L75.CB) [> 4.2202 = 7.0337 < 9.1439] w=0.0237 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)I126.CB) [> 4.7581 = 7.9302 < 10.3093] w=0.0237 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)S128.CB) [> 4.0836 = 6.8060 < 8.8478] w=0.0237 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)F96.CB) [> 4.2308 = 7.0513 < 9.1667] w=0.0237 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)L75.CB) [> 2.8110 = 4.6851 < 6.0906] w=0.0237 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)L75.CB) [> 2.5791 = 4.2985 < 5.5880] w=0.0237 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)L66.CB) [> 4.2581 = 7.0968 < 9.2259] w=0.0236 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)L64.CB) [> 4.2007 = 7.0012 < 9.1016] w=0.0235 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)E209.CB) [> 4.5318 = 7.5529 < 9.8188] w=0.0231 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)I217.CB) [> 4.7432 = 7.9053 < 10.2768] w=0.0231 to align # Constraint # added constraint: constraint((T0325)E108.CB, (T0325)N211.CB) [> 2.9959 = 4.9931 < 6.4911] w=0.0231 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)E209.CB) [> 4.7938 = 7.9897 < 10.3866] w=0.0231 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)F216.CB) [> 4.4080 = 7.3467 < 9.5507] w=0.0231 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)S34.CB) [> 3.6897 = 6.1494 < 7.9943] w=0.0231 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)L75.CB) [> 4.5972 = 7.6621 < 9.9607] w=0.0231 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)I210.CB) [> 3.1935 = 5.3226 < 6.9193] w=0.0228 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)T65.CB) [> 4.0340 = 6.7234 < 8.7404] w=0.0222 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)T65.CB) [> 4.6266 = 7.7110 < 10.0243] w=0.0222 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)T67.CB) [> 3.0666 = 5.1110 < 6.6442] w=0.0222 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)A215.CB) [> 4.5240 = 7.5399 < 9.8019] w=0.0222 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)I217.CB) [> 3.7671 = 6.2784 < 8.1620] w=0.0222 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)N211.CB) [> 4.6285 = 7.7141 < 10.0284] w=0.0222 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)C212.CB) [> 3.8750 = 6.4584 < 8.3959] w=0.0222 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)H213.CB) [> 4.3813 = 7.3021 < 9.4927] w=0.0222 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)P214.CB) [> 4.0872 = 6.8120 < 8.8556] w=0.0222 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)E209.CB) [> 4.2825 = 7.1375 < 9.2788] w=0.0222 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)L64.CB) [> 4.1111 = 6.8519 < 8.9075] w=0.0205 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)N156.CB) [> 3.9419 = 6.5699 < 8.5408] w=0.0205 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)N156.CB) [> 3.3036 = 5.5060 < 7.1578] w=0.0205 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)L144.CB) [> 4.6083 = 7.6805 < 9.9846] w=0.0205 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)C212.CB) [> 4.2239 = 7.0398 < 9.1517] w=0.0205 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)A215.CB) [> 3.0619 = 5.1032 < 6.6341] w=0.0205 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)P214.CB) [> 4.2800 = 7.1334 < 9.2734] w=0.0205 to align # Constraint # added constraint: constraint((T0325)V105.CB, (T0325)K149.CB) [> 4.1369 = 6.8948 < 8.9633] w=0.0202 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)I210.CB) [> 4.5618 = 7.6030 < 9.8839] w=0.0200 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)C212.CB) [> 4.3004 = 7.1673 < 9.3175] w=0.0198 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)E209.CB) [> 3.2124 = 5.3541 < 6.9603] w=0.0198 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)P214.CB) [> 2.9447 = 4.9078 < 6.3801] w=0.0198 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)P214.CB) [> 3.8615 = 6.4359 < 8.3667] w=0.0198 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)A215.CB) [> 4.2075 = 7.0124 < 9.1162] w=0.0198 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)C212.CB) [> 3.6297 = 6.0495 < 7.8643] w=0.0198 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)C212.CB) [> 4.3517 = 7.2529 < 9.4288] w=0.0198 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)I193.CB) [> 4.5528 = 7.5880 < 9.8644] w=0.0198 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)E108.CB) [> 3.6340 = 6.0567 < 7.8738] w=0.0196 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)E108.CB) [> 3.4443 = 5.7405 < 7.4626] w=0.0196 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)V105.CB) [> 4.7530 = 7.9218 < 10.2983] w=0.0196 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)L196.CB) [> 3.8660 = 6.4434 < 8.3764] w=0.0195 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)L64.CB) [> 3.6448 = 6.0746 < 7.8970] w=0.0194 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)S128.CB) [> 4.2329 = 7.0549 < 9.1714] w=0.0194 to align # Constraint # added constraint: constraint((T0325)D12.CB, (T0325)S34.CB) [> 3.3314 = 5.5523 < 7.2180] w=0.0193 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)T33.CB) [> 4.5391 = 7.5651 < 9.8347] w=0.0193 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)C202.CB) [> 4.5537 = 7.5895 < 9.8664] w=0.0185 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)T67.CB) [> 4.3560 = 7.2601 < 9.4381] w=0.0178 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)C212.CB) [> 4.5895 = 7.6491 < 9.9439] w=0.0176 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)A215.CB) [> 3.5898 = 5.9831 < 7.7780] w=0.0176 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)A215.CB) [> 4.1106 = 6.8510 < 8.9063] w=0.0176 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)P214.CB) [> 3.9587 = 6.5979 < 8.5772] w=0.0176 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)A215.CB) [> 2.4746 = 4.1243 < 5.3616] w=0.0176 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)P214.CB) [> 3.9125 = 6.5209 < 8.4772] w=0.0174 to align # Constraint # added constraint: constraint((T0325)A59.CB, (T0325)D127.CB) [> 3.5931 = 5.9885 < 7.7851] w=0.0170 to align # Constraint # added constraint: constraint((T0325)Q21.CB, (T0325)E108.CB) [> 4.7015 = 7.8359 < 10.1866] w=0.0169 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)A215.CB) [> 4.3663 = 7.2772 < 9.4604] w=0.0169 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)A215.CB) [> 4.0650 = 6.7751 < 8.8076] w=0.0169 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)N211.CB) [> 2.7066 = 4.5110 < 5.8643] w=0.0148 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)L75.CB) [> 3.5336 = 5.8893 < 7.6561] w=0.0121 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)S128.CB) [> 2.5453 = 4.2421 < 5.5148] w=0.0121 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)I126.CB) [> 4.2317 = 7.0528 < 9.1686] w=0.0121 to align # Constraint # added constraint: constraint((T0325)L144.CB, (T0325)E209.CB) [> 4.2696 = 7.1160 < 9.2508] w=0.0121 to align # Constraint # added constraint: constraint((T0325)V105.CB, (T0325)L196.CB) [> 3.9368 = 6.5614 < 8.5298] w=0.0120 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)L196.CB) [> 4.7758 = 7.9597 < 10.3477] w=0.0120 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)L196.CB) [> 3.3228 = 5.5380 < 7.1994] w=0.0119 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)I193.CB) [> 4.0645 = 6.7742 < 8.8064] w=0.0119 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)E209.CB) [> 4.0823 = 6.8039 < 8.8450] w=0.0119 to align # Constraint # added constraint: constraint((T0325)T36.CB, (T0325)P73.CB) [> 4.6120 = 7.6867 < 9.9927] w=0.0119 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)E209.CB) [> 3.3910 = 5.6517 < 7.3472] w=0.0119 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)L169.CB) [> 3.5285 = 5.8809 < 7.6452] w=0.0119 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)R159.CB) [> 4.5332 = 7.5553 < 9.8219] w=0.0119 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)R159.CB) [> 3.5146 = 5.8576 < 7.6149] w=0.0119 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)I193.CB) [> 4.5645 = 7.6075 < 9.8897] w=0.0119 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)L196.CB) [> 2.7362 = 4.5603 < 5.9284] w=0.0119 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)P73.CB) [> 4.3195 = 7.1992 < 9.3590] w=0.0119 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)P73.CB) [> 4.4620 = 7.4366 < 9.6676] w=0.0119 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)L144.CB) [> 2.8039 = 4.6732 < 6.0752] w=0.0119 to align # Constraint # added constraint: constraint((T0325)H63.CB, (T0325)R159.CB) [> 4.0343 = 6.7238 < 8.7410] w=0.0119 to align # Constraint # added constraint: constraint((T0325)T65.CB, (T0325)R159.CB) [> 4.0146 = 6.6910 < 8.6983] w=0.0119 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)R159.CB) [> 3.7590 = 6.2649 < 8.1444] w=0.0119 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)H63.CB) [> 3.8057 = 6.3429 < 8.2458] w=0.0119 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)E108.CB) [> 4.7590 = 7.9317 < 10.3112] w=0.0117 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)L75.CB) [> 3.1719 = 5.2865 < 6.8725] w=0.0117 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)L75.CB) [> 3.9102 = 6.5171 < 8.4722] w=0.0117 to align # Constraint # added constraint: constraint((T0325)I126.CB, (T0325)H213.CB) [> 4.0607 = 6.7678 < 8.7981] w=0.0116 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)P214.CB) [> 3.8419 = 6.4032 < 8.3241] w=0.0116 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)H213.CB) [> 4.3050 = 7.1750 < 9.3275] w=0.0116 to align # Constraint # added constraint: constraint((T0325)S128.CB, (T0325)A215.CB) [> 4.2441 = 7.0734 < 9.1954] w=0.0116 to align # Constraint # added constraint: constraint((T0325)T40.CB, (T0325)D127.CB) [> 3.4540 = 5.7566 < 7.4837] w=0.0116 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)D127.CB) [> 3.9178 = 6.5296 < 8.4885] w=0.0116 to align # Constraint # added constraint: constraint((T0325)L66.CB, (T0325)E209.CB) [> 3.6897 = 6.1496 < 7.9945] w=0.0113 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)A215.CB) [> 2.3696 = 3.9494 < 5.1342] w=0.0112 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)N156.CB) [> 3.2472 = 5.4119 < 7.0355] w=0.0112 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)A215.CB) [> 2.3261 = 3.8769 < 5.0400] w=0.0112 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)P214.CB) [> 4.3185 = 7.1975 < 9.3568] w=0.0112 to align # Constraint # added constraint: constraint((T0325)I7.CB, (T0325)H213.CB) [> 3.7819 = 6.3032 < 8.1941] w=0.0112 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)N156.CB) [> 4.6344 = 7.7240 < 10.0412] w=0.0112 to align # Constraint # added constraint: constraint((T0325)L6.CB, (T0325)H63.CB) [> 4.4101 = 7.3501 < 9.5551] w=0.0112 to align # Constraint # added constraint: constraint((T0325)V62.CB, (T0325)V105.CB) [> 4.1378 = 6.8963 < 8.9652] w=0.0111 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)C202.CB) [> 4.1023 = 6.8371 < 8.8883] w=0.0101 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)R159.CB) [> 3.1920 = 5.3199 < 6.9159] w=0.0099 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)I210.CB) [> 3.2632 = 5.4386 < 7.0702] w=0.0099 to align # Constraint # added constraint: constraint((T0325)T67.CB, (T0325)H213.CB) [> 4.7748 = 7.9580 < 10.3453] w=0.0099 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)H213.CB) [> 4.4117 = 7.3528 < 9.5586] w=0.0099 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)H213.CB) [> 4.6285 = 7.7141 < 10.0284] w=0.0099 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)C212.CB) [> 4.2183 = 7.0305 < 9.1397] w=0.0099 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)H213.CB) [> 3.8668 = 6.4446 < 8.3780] w=0.0099 to align # Constraint # added constraint: constraint((T0325)L38.CB, (T0325)A215.CB) [> 3.8093 = 6.3489 < 8.2535] w=0.0099 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)H213.CB) [> 2.5130 = 4.1883 < 5.4448] w=0.0099 to align # Constraint # added constraint: constraint((T0325)P39.CB, (T0325)A215.CB) [> 3.3191 = 5.5319 < 7.1915] w=0.0099 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)D127.CB) [> 2.8751 = 4.7919 < 6.2294] w=0.0098 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)S128.CB) [> 3.6616 = 6.1026 < 7.9334] w=0.0098 to align # Constraint # added constraint: constraint((T0325)A47.CB, (T0325)N156.CB) [> 4.4055 = 7.3424 < 9.5452] w=0.0098 to align # Constraint # added constraint: constraint((T0325)M1.CB, (T0325)V31.CB) [> 3.6892 = 6.1487 < 7.9933] w=0.0098 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)I126.CB) [> 3.9423 = 6.5706 < 8.5418] w=0.0098 to align # Constraint # added constraint: constraint((T0325)S34.CB, (T0325)D127.CB) [> 3.2533 = 5.4222 < 7.0489] w=0.0098 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)D127.CB) [> 3.0605 = 5.1007 < 6.6310] w=0.0096 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)L75.CB) [> 4.0178 = 6.6963 < 8.7051] w=0.0094 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)H213.CB) [> 3.1646 = 5.2743 < 6.8566] w=0.0092 to align # Constraint # added constraint: constraint((T0325)A59.CB, (T0325)E209.CB) [> 4.6600 = 7.7667 < 10.0967] w=0.0092 to align # Constraint # added constraint: constraint((T0325)T33.CB, (T0325)A47.CB) [> 4.5300 = 7.5499 < 9.8149] w=0.0085 to align # Constraint # added constraint: constraint((T0325)I60.CB, (T0325)P73.CB) [> 4.4841 = 7.4735 < 9.7155] w=0.0083 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)T40.CB) [> 3.8890 = 6.4817 < 8.4263] w=0.0082 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)H213.CB) [> 3.2837 = 5.4729 < 7.1148] w=0.0082 to align # Constraint # added constraint: constraint((T0325)P73.CB, (T0325)A215.CB) [> 2.5468 = 4.2447 < 5.5181] w=0.0082 to align # Constraint # added constraint: constraint((T0325)I8.CB, (T0325)L64.CB) [> 4.3702 = 7.2837 < 9.4688] w=0.0082 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)L64.CB) [> 4.6080 = 7.6800 < 9.9840] w=0.0082 to align # Constraint # added constraint: constraint((T0325)F13.CB, (T0325)T65.CB) [> 4.1768 = 6.9614 < 9.0498] w=0.0082 to align # Constraint # added constraint: constraint((T0325)L75.CB, (T0325)P214.CB) [> 4.3611 = 7.2684 < 9.4490] w=0.0082 to align # Constraint # added constraint: constraint((T0325)D127.CB, (T0325)I193.CB) [> 4.6072 = 7.6786 < 9.9822] w=0.0082 to align # Constraint # added constraint: constraint((T0325)N9.CB, (T0325)P73.CB) [> 3.4151 = 5.6918 < 7.3993] w=0.0075 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)P73.CB) [> 4.1144 = 6.8574 < 8.9146] w=0.0075 to align # Constraint # added constraint: constraint((T0325)A37.CB, (T0325)E108.CB) [> 4.6966 = 7.8277 < 10.1760] w=0.0075 to align # Constraint # added constraint: constraint((T0325)L196.CB, (T0325)H213.CB) [> 4.6314 = 7.7189 < 10.0346] w=0.0057 to align # Constraint # added constraint: constraint((T0325)L196.CB, (T0325)P214.CB) [> 4.1675 = 6.9458 < 9.0295] w=0.0057 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)N156.CB) [> 4.5766 = 7.6276 < 9.9159] w=0.0056 to align # Constraint # added constraint: constraint((T0325)A10.CB, (T0325)I210.CB) [> 4.4693 = 7.4489 < 9.6836] w=0.0056 to align # SetCost created cost = # ( 1.0000 * align ) # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/constraints_v3/T0325/ # command:# reading script from file servers-clean.under # Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0325/decoys/ # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS1 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS2 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS3 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS4 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS5 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS1 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS2 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS3 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS1 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS2 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS3 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS4.pdb.gz looking for model 1 # choosing archetypes in rotamer library # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation 3D-JIGSAW_TS4 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS5 # ReadConformPDB reading from PDB file servers/3Dpro_TS1.pdb.gz looking for model 1 # Found a chain break before 222 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS1 # ReadConformPDB reading from PDB file servers/3Dpro_TS2.pdb.gz looking for model 1 # Found a chain break before 204 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS2 # ReadConformPDB reading from PDB file servers/3Dpro_TS3.pdb.gz looking for model 1 # Found a chain break before 198 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS3 # ReadConformPDB reading from PDB file servers/3Dpro_TS4.pdb.gz looking for model 1 # Found a chain break before 190 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS4 # ReadConformPDB reading from PDB file servers/3Dpro_TS5.pdb.gz looking for model 1 # Found a chain break before 210 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS5 # ReadConformPDB reading from PDB file servers/ABIpro_TS1.pdb.gz looking for model 1 # Found a chain break before 254 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS1 # ReadConformPDB reading from PDB file servers/ABIpro_TS2.pdb.gz looking for model 1 # Found a chain break before 254 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS2 # ReadConformPDB reading from PDB file servers/ABIpro_TS3.pdb.gz looking for model 1 # Found a chain break before 245 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS3 # ReadConformPDB reading from PDB file servers/ABIpro_TS4.pdb.gz looking for model 1 # Found a chain break before 240 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS4 # ReadConformPDB reading from PDB file servers/ABIpro_TS5.pdb.gz looking for model 1 # Found a chain break before 209 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS5 # ReadConformPDB reading from PDB file servers/BayesHH_TS1.pdb.gz looking for model 1 # Found a chain break before 236 # copying to AlignedFragments data structure # naming current conformation BayesHH_TS1 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS1.pdb.gz looking for model 1 # naming current conformation Bilab-ENABLE_TS1 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS2.pdb.gz looking for model 1 # naming current conformation Bilab-ENABLE_TS2 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS3.pdb.gz looking for model 1 # naming current conformation Bilab-ENABLE_TS3 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS4.pdb.gz looking for model 1 # naming current conformation Bilab-ENABLE_TS4 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS5.pdb.gz looking for model 1 # Found a chain break before 178 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS5 # ReadConformPDB reading from PDB file servers/CIRCLE_TS1.pdb.gz looking for model 1 # Found a chain break before 238 # copying to AlignedFragments data structure # naming current conformation CIRCLE_TS1 # ReadConformPDB reading from PDB file servers/CIRCLE_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS2 # ReadConformPDB reading from PDB file servers/CIRCLE_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS3 # ReadConformPDB reading from PDB file servers/CIRCLE_TS4.pdb.gz looking for model 1 # Found a chain break before 256 # copying to AlignedFragments data structure # naming current conformation CIRCLE_TS4 # ReadConformPDB reading from PDB file servers/CIRCLE_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS5 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS1 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS2 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS3 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS4 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS5 # ReadConformPDB reading from PDB file servers/Distill_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Distill_TS1 # ReadConformPDB reading from PDB file servers/Distill_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Distill_TS2 # ReadConformPDB reading from PDB file servers/Distill_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Distill_TS3 # ReadConformPDB reading from PDB file servers/Distill_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Distill_TS4 # ReadConformPDB reading from PDB file servers/Distill_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Distill_TS5 # ReadConformPDB reading from PDB file servers/FAMSD_TS1.pdb.gz looking for model 1 # Found a chain break before 258 # copying to AlignedFragments data structure # naming current conformation FAMSD_TS1 # ReadConformPDB reading from PDB file servers/FAMSD_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FAMSD_TS2 # ReadConformPDB reading from PDB file servers/FAMSD_TS3.pdb.gz looking for model 1 # Found a chain break before 260 # copying to AlignedFragments data structure # naming current conformation FAMSD_TS3 # ReadConformPDB reading from PDB file servers/FAMSD_TS4.pdb.gz looking for model 1 # Found a chain break before 261 # copying to AlignedFragments data structure # naming current conformation FAMSD_TS4 # ReadConformPDB reading from PDB file servers/FAMSD_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FAMSD_TS5 # ReadConformPDB reading from PDB file servers/FAMS_TS1.pdb.gz looking for model 1 # Found a chain break before 255 # copying to AlignedFragments data structure # naming current conformation FAMS_TS1 # ReadConformPDB reading from PDB file servers/FAMS_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FAMS_TS2 # ReadConformPDB reading from PDB file servers/FAMS_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FAMS_TS3 # ReadConformPDB reading from PDB file servers/FAMS_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FAMS_TS4 # ReadConformPDB reading from PDB file servers/FAMS_TS5.pdb.gz looking for model 1 # Found a chain break before 256 # copying to AlignedFragments data structure # naming current conformation FAMS_TS5 # ReadConformPDB reading from PDB file servers/FOLDpro_TS1.pdb.gz looking for model 1 # Found a chain break before 216 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS1 # ReadConformPDB reading from PDB file servers/FOLDpro_TS2.pdb.gz looking for model 1 # Found a chain break before 228 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS2 # ReadConformPDB reading from PDB file servers/FOLDpro_TS3.pdb.gz looking for model 1 # Found a chain break before 160 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS3 # ReadConformPDB reading from PDB file servers/FOLDpro_TS4.pdb.gz looking for model 1 # Found a chain break before 156 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS4 # ReadConformPDB reading from PDB file servers/FOLDpro_TS5.pdb.gz looking for model 1 # Found a chain break before 166 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS5 # ReadConformPDB reading from PDB file servers/FORTE1_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FORTE1_AL1 # ReadConformPDB reading from PDB file servers/FORTE1_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FORTE1_AL2 # ReadConformPDB reading from PDB file servers/FORTE1_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FORTE1_AL3 # ReadConformPDB reading from PDB file servers/FORTE1_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FORTE1_AL4 # ReadConformPDB reading from PDB file servers/FORTE1_AL5.pdb.gz looking for model 1 Skipped atom 149, because occupancy 1 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz Skipped atom 150, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz Skipped atom 151, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz Skipped atom 152, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz Skipped atom 545, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz Skipped atom 546, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz Skipped atom 547, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz Skipped atom 548, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FORTE1_AL5 # ReadConformPDB reading from PDB file servers/FORTE2_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FORTE2_AL1 # ReadConformPDB reading from PDB file servers/FORTE2_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FORTE2_AL2 # ReadConformPDB reading from PDB file servers/FORTE2_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FORTE2_AL3 # ReadConformPDB reading from PDB file servers/FORTE2_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FORTE2_AL4 # ReadConformPDB reading from PDB file servers/FORTE2_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FORTE2_AL5 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS1.pdb.gz looking for model 1 # Found a chain break before 233 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS1 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS2.pdb.gz looking for model 1 # Found a chain break before 260 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS2 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS3.pdb.gz looking for model 1 # Found a chain break before 182 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS3 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS4.pdb.gz looking for model 1 # Found a chain break before 257 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS4 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS5.pdb.gz looking for model 1 # Found a chain break before 261 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS5 # ReadConformPDB reading from PDB file servers/FUGMOD_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS1 # ReadConformPDB reading from PDB file servers/FUGMOD_TS2.pdb.gz looking for model 1 # Found a chain break before 227 # copying to AlignedFragments data structure # naming current conformation FUGMOD_TS2 # ReadConformPDB reading from PDB file servers/FUGMOD_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation FUGMOD_TS3 # ReadConformPDB reading from PDB file servers/FUGMOD_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS4 # ReadConformPDB reading from PDB file servers/FUGMOD_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS5 # ReadConformPDB reading from PDB file servers/FUGUE_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FUGUE_AL1 # ReadConformPDB reading from PDB file servers/FUGUE_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FUGUE_AL3 # ReadConformPDB reading from PDB file servers/FUGUE_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FUGUE_AL4 # ReadConformPDB reading from PDB file servers/FUGUE_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation FUGUE_AL5 # ReadConformPDB reading from PDB file servers/FUNCTION_TS1.pdb.gz looking for model 1 # Found a chain break before 255 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS1 # ReadConformPDB reading from PDB file servers/FUNCTION_TS2.pdb.gz looking for model 1 # Found a chain break before 258 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS2 # ReadConformPDB reading from PDB file servers/FUNCTION_TS3.pdb.gz looking for model 1 # Found a chain break before 258 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS3 # ReadConformPDB reading from PDB file servers/FUNCTION_TS4.pdb.gz looking for model 1 # Found a chain break before 261 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS4 # ReadConformPDB reading from PDB file servers/FUNCTION_TS5.pdb.gz looking for model 1 # Found a chain break before 238 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS5 # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS1.pdb.gz looking for model 1 # Found a chain break before 241 # copying to AlignedFragments data structure # naming current conformation GeneSilicoMetaServer_TS1 # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS2.pdb.gz looking for model 1 # Found a chain break before 189 # copying to AlignedFragments data structure # naming current conformation GeneSilicoMetaServer_TS2 # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS3.pdb.gz looking for model 1 # Found a chain break before 187 # copying to AlignedFragments data structure # naming current conformation GeneSilicoMetaServer_TS3 # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation GeneSilicoMetaServer_TS4 # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation GeneSilicoMetaServer_TS5 # ReadConformPDB reading from PDB file servers/HHpred1_TS1.pdb.gz looking for model 1 # Found a chain break before 189 # copying to AlignedFragments data structure # naming current conformation HHpred1_TS1 # ReadConformPDB reading from PDB file servers/HHpred2_TS1.pdb.gz looking for model 1 # Found a chain break before 190 # copying to AlignedFragments data structure # naming current conformation HHpred2_TS1 # ReadConformPDB reading from PDB file servers/HHpred3_TS1.pdb.gz looking for model 1 # Found a chain break before 176 # copying to AlignedFragments data structure # naming current conformation HHpred3_TS1 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS1 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS2 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS3 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS4 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS5 # ReadConformPDB reading from PDB file servers/LOOPP_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation LOOPP_TS1 # ReadConformPDB reading from PDB file servers/LOOPP_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation LOOPP_TS2 # ReadConformPDB reading from PDB file servers/LOOPP_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation LOOPP_TS3 # ReadConformPDB reading from PDB file servers/LOOPP_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation LOOPP_TS4 # ReadConformPDB reading from PDB file servers/LOOPP_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation LOOPP_TS5 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS1.pdb.gz looking for model 1 # Found a chain break before 257 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server2_TS1 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS2.pdb.gz looking for model 1 # Found a chain break before 200 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server2_TS2 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS3.pdb.gz looking for model 1 # Found a chain break before 253 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server2_TS3 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS4.pdb.gz looking for model 1 # Found a chain break before 217 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server2_TS4 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS5.pdb.gz looking for model 1 # Found a chain break before 259 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server2_TS5 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS1.pdb.gz looking for model 1 # Found a chain break before 259 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS1 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS2.pdb.gz looking for model 1 # Found a chain break before 253 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS2 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS3.pdb.gz looking for model 1 # Found a chain break before 251 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS3 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS4.pdb.gz looking for model 1 # Found a chain break before 156 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS4 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS5.pdb.gz looking for model 1 # Found a chain break before 257 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS5 # ReadConformPDB reading from PDB file servers/MetaTasser_TS1.pdb.gz looking for model 1 # Found a chain break before 254 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS1 # ReadConformPDB reading from PDB file servers/MetaTasser_TS2.pdb.gz looking for model 1 # Found a chain break before 260 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS2 # ReadConformPDB reading from PDB file servers/MetaTasser_TS3.pdb.gz looking for model 1 # Found a chain break before 261 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS3 # ReadConformPDB reading from PDB file servers/MetaTasser_TS4.pdb.gz looking for model 1 # Found a chain break before 261 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS4 # ReadConformPDB reading from PDB file servers/MetaTasser_TS5.pdb.gz looking for model 1 # Found a chain break before 254 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS5 # ReadConformPDB reading from PDB file servers/NN_PUT_lab_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation NN_PUT_lab_TS1 # ReadConformPDB reading from PDB file servers/POMYSL_TS1.pdb.gz looking for model 1 # Found a chain break before 257 # copying to AlignedFragments data structure # naming current conformation POMYSL_TS1 # ReadConformPDB reading from PDB file servers/POMYSL_TS2.pdb.gz looking for model 1 # Found a chain break before 254 # copying to AlignedFragments data structure # naming current conformation POMYSL_TS2 # ReadConformPDB reading from PDB file servers/POMYSL_TS3.pdb.gz looking for model 1 # Found a chain break before 250 # copying to AlignedFragments data structure # naming current conformation POMYSL_TS3 # ReadConformPDB reading from PDB file servers/POMYSL_TS4.pdb.gz looking for model 1 # Found a chain break before 258 # copying to AlignedFragments data structure # naming current conformation POMYSL_TS4 # ReadConformPDB reading from PDB file servers/POMYSL_TS5.pdb.gz looking for model 1 # Found a chain break before 256 # copying to AlignedFragments data structure # naming current conformation POMYSL_TS5 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS1.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS1 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS2.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS2 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS3.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS3 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS4.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS4 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS5.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS5 # ReadConformPDB reading from PDB file servers/PROTINFO_TS1.pdb.gz looking for model 1 # Found a chain break before 236 # copying to AlignedFragments data structure # naming current conformation PROTINFO_TS1 # ReadConformPDB reading from PDB file servers/PROTINFO_TS2.pdb.gz looking for model 1 # Found a chain break before 232 # copying to AlignedFragments data structure # naming current conformation PROTINFO_TS2 # ReadConformPDB reading from PDB file servers/PROTINFO_TS3.pdb.gz looking for model 1 # Found a chain break before 241 # copying to AlignedFragments data structure # naming current conformation PROTINFO_TS3 # ReadConformPDB reading from PDB file servers/PROTINFO_TS4.pdb.gz looking for model 1 # Found a chain break before 232 # copying to AlignedFragments data structure # naming current conformation PROTINFO_TS4 # ReadConformPDB reading from PDB file servers/PROTINFO_TS5.pdb.gz looking for model 1 # Found a chain break before 238 # copying to AlignedFragments data structure # naming current conformation PROTINFO_TS5 # ReadConformPDB reading from PDB file servers/Pcons6_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Pcons6_TS1 # ReadConformPDB reading from PDB file servers/Pcons6_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Pcons6_TS2 # ReadConformPDB reading from PDB file servers/Pcons6_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Pcons6_TS3 # ReadConformPDB reading from PDB file servers/Pcons6_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Pcons6_TS4 # ReadConformPDB reading from PDB file servers/Pcons6_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Pcons6_TS5 # ReadConformPDB reading from PDB file servers/Phyre-1_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Phyre-1_TS1 # ReadConformPDB reading from PDB file servers/Phyre-2_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS1 # ReadConformPDB reading from PDB file servers/Phyre-2_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Phyre-2_TS2 # ReadConformPDB reading from PDB file servers/Phyre-2_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Phyre-2_TS3 # ReadConformPDB reading from PDB file servers/Phyre-2_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Phyre-2_TS4 # ReadConformPDB reading from PDB file servers/Phyre-2_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS5 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS1 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS2 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS3.pdb.gz looking for model 1 # Found a chain break before 237 # copying to AlignedFragments data structure # naming current conformation Pmodeller6_TS3 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS4.pdb.gz looking for model 1 # Found a chain break before 211 # copying to AlignedFragments data structure # naming current conformation Pmodeller6_TS4 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS5.pdb.gz looking for model 1 # Found a chain break before 238 # copying to AlignedFragments data structure # naming current conformation Pmodeller6_TS5 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS1.pdb.gz looking for model 1 # Found a chain break before 228 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS1 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS2.pdb.gz looking for model 1 # Found a chain break before 223 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS2 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS3.pdb.gz looking for model 1 # Found a chain break before 225 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS3 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS4.pdb.gz looking for model 1 # Found a chain break before 261 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS4 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS5.pdb.gz looking for model 1 # Found a chain break before 44 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS5 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS1.pdb.gz looking for model 1 # Found a chain break before 176 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS1 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS2.pdb.gz looking for model 1 # Found a chain break before 258 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS2 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS3.pdb.gz looking for model 1 # Found a chain break before 100 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS3 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS4.pdb.gz looking for model 1 # Found a chain break before 258 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS4 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS5.pdb.gz looking for model 1 # Found a chain break before 229 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS5 # ReadConformPDB reading from PDB file servers/RAPTOR_TS1.pdb.gz looking for model 1 # Found a chain break before 187 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS1 # ReadConformPDB reading from PDB file servers/RAPTOR_TS2.pdb.gz looking for model 1 # Found a chain break before 251 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS2 # ReadConformPDB reading from PDB file servers/RAPTOR_TS3.pdb.gz looking for model 1 Faking rotamer for incomplete or colinear backbone at (T0325)N107 Faking rotamer for incomplete or colinear backbone at (T0325)N107 # Found a chain break before 258 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS3 # ReadConformPDB reading from PDB file servers/RAPTOR_TS4.pdb.gz looking for model 1 # Found a chain break before 208 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS4 # ReadConformPDB reading from PDB file servers/RAPTOR_TS5.pdb.gz looking for model 1 # Found a chain break before 154 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS5 # ReadConformPDB reading from PDB file servers/ROBETTA_TS1.pdb.gz looking for model 1 # Found a chain break before 238 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS1 # ReadConformPDB reading from PDB file servers/ROBETTA_TS2.pdb.gz looking for model 1 # Found a chain break before 239 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS2 # ReadConformPDB reading from PDB file servers/ROBETTA_TS3.pdb.gz looking for model 1 # Found a chain break before 237 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS3 # ReadConformPDB reading from PDB file servers/ROBETTA_TS4.pdb.gz looking for model 1 # Found a chain break before 211 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS4 # ReadConformPDB reading from PDB file servers/ROBETTA_TS5.pdb.gz looking for model 1 # Found a chain break before 241 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS5 # ReadConformPDB reading from PDB file servers/ROKKY_TS1.pdb.gz looking for model 1 WARNING: atoms too close: (T0325)N9.CA and (T0325)N9.CB only 0.000 apart, marking (T0325)N9.CB as missing WARNING: atoms too close: (T0325)V19.CA and (T0325)V19.CB only 0.000 apart, marking (T0325)V19.CB as missing WARNING: atoms too close: (T0325)E25.CA and (T0325)E25.CB only 0.000 apart, marking (T0325)E25.CB as missing WARNING: atoms too close: (T0325)T40.CA and (T0325)T40.CB only 0.000 apart, marking (T0325)T40.CB as missing WARNING: atoms too close: (T0325)Y43.CA and (T0325)Y43.CB only 0.000 apart, marking (T0325)Y43.CB as missing WARNING: atoms too close: (T0325)P73.CA and (T0325)P73.CB only 0.000 apart, marking (T0325)P73.CB as missing WARNING: atoms too close: (T0325)R77.CA and (T0325)R77.CB only 0.000 apart, marking (T0325)R77.CB as missing WARNING: atoms too close: (T0325)V80.CA and (T0325)V80.CB only 0.000 apart, marking (T0325)V80.CB as missing WARNING: atoms too close: (T0325)D85.CA and (T0325)D85.CB only 0.000 apart, marking (T0325)D85.CB as missing WARNING: atoms too close: (T0325)A87.CA and (T0325)A87.CB only 0.000 apart, marking (T0325)A87.CB as missing WARNING: atoms too close: (T0325)F90.CA and (T0325)F90.CB only 0.000 apart, marking (T0325)F90.CB as missing WARNING: atoms too close: (T0325)S94.CA and (T0325)S94.CB only 0.000 apart, marking (T0325)S94.CB as missing WARNING: atoms too close: (T0325)E97.CA and (T0325)E97.CB only 0.000 apart, marking (T0325)E97.CB as missing WARNING: atoms too close: (T0325)E103.CA and (T0325)E103.CB only 0.000 apart, marking (T0325)E103.CB as missing WARNING: atoms too close: (T0325)E108.CA and (T0325)E108.CB only 0.000 apart, marking (T0325)E108.CB as missing WARNING: atoms too close: (T0325)I114.CA and (T0325)I114.CB only 0.000 apart, marking (T0325)I114.CB as missing WARNING: atoms too close: (T0325)D124.CA and (T0325)D124.CB only 0.000 apart, marking (T0325)D124.CB as missing WARNING: atoms too close: (T0325)V132.CA and (T0325)V132.CB only 0.000 apart, marking (T0325)V132.CB as missing WARNING: atoms too close: (T0325)A147.CA and (T0325)A147.CB only 0.000 apart, marking (T0325)A147.CB as missing WARNING: atoms too close: (T0325)Y150.CA and (T0325)Y150.CB only 0.000 apart, marking (T0325)Y150.CB as missing WARNING: atoms too close: (T0325)S160.CA and (T0325)S160.CB only 0.000 apart, marking (T0325)S160.CB as missing WARNING: atoms too close: (T0325)T163.CA and (T0325)T163.CB only 0.000 apart, marking (T0325)T163.CB as missing WARNING: atoms too close: (T0325)Y166.CA and (T0325)Y166.CB only 0.000 apart, marking (T0325)Y166.CB as missing WARNING: atoms too close: (T0325)L169.CA and (T0325)L169.CB only 0.000 apart, marking (T0325)L169.CB as missing WARNING: atoms too close: (T0325)Q171.CA and (T0325)Q171.CB only 0.000 apart, marking (T0325)Q171.CB as missing WARNING: atoms too close: (T0325)K186.CA and (T0325)K186.CB only 0.000 apart, marking (T0325)K186.CB as missing WARNING: atoms too close: (T0325)T192.CA and (T0325)T192.CB only 0.000 apart, marking (T0325)T192.CB as missing WARNING: atoms too close: (T0325)I193.CA and (T0325)I193.CB only 0.000 apart, marking (T0325)I193.CB as missing WARNING: atoms too close: (T0325)M199.CA and (T0325)M199.CB only 0.000 apart, marking (T0325)M199.CB as missing WARNING: atoms too close: (T0325)E209.CA and (T0325)E209.CB only 0.000 apart, marking (T0325)E209.CB as missing WARNING: atoms too close: (T0325)C228.CA and (T0325)C228.CB only 0.000 apart, marking (T0325)C228.CB as missing WARNING: atoms too close: (T0325)E236.CA and (T0325)E236.CB only 0.000 apart, marking (T0325)E236.CB as missing WARNING: atoms too close: (T0325)S259.CA and (T0325)S259.CB only 0.000 apart, marking (T0325)S259.CB as missing # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation ROKKY_TS1 # ReadConformPDB reading from PDB file servers/ROKKY_TS2.pdb.gz looking for model 1 WARNING: atoms too close: (T0325)K4.CA and (T0325)K4.CB only 0.000 apart, marking (T0325)K4.CB as missing WARNING: atoms too close: (T0325)Y15.CA and (T0325)Y15.CB only 0.000 apart, marking (T0325)Y15.CB as missing WARNING: atoms too close: (T0325)I23.CA and (T0325)I23.CB only 0.000 apart, marking (T0325)I23.CB as missing WARNING: atoms too close: (T0325)L38.CA and (T0325)L38.CB only 0.000 apart, marking (T0325)L38.CB as missing WARNING: atoms too close: (T0325)Y43.CA and (T0325)Y43.CB only 0.000 apart, marking (T0325)Y43.CB as missing WARNING: atoms too close: (T0325)A51.CA and (T0325)A51.CB only 0.000 apart, marking (T0325)A51.CB as missing WARNING: atoms too close: (T0325)R52.CA and (T0325)R52.CB only 0.000 apart, marking (T0325)R52.CB as missing WARNING: atoms too close: (T0325)A59.CA and (T0325)A59.CB only 0.000 apart, marking (T0325)A59.CB as missing WARNING: atoms too close: (T0325)I60.CA and (T0325)I60.CB only 0.000 apart, marking (T0325)I60.CB as missing WARNING: atoms too close: (T0325)P73.CA and (T0325)P73.CB only 0.000 apart, marking (T0325)P73.CB as missing WARNING: atoms too close: (T0325)E78.CA and (T0325)E78.CB only 0.000 apart, marking (T0325)E78.CB as missing WARNING: atoms too close: (T0325)V80.CA and (T0325)V80.CB only 0.000 apart, marking (T0325)V80.CB as missing WARNING: atoms too close: (T0325)P81.CA and (T0325)P81.CB only 0.000 apart, marking (T0325)P81.CB as missing WARNING: atoms too close: (T0325)D85.CA and (T0325)D85.CB only 0.000 apart, marking (T0325)D85.CB as missing WARNING: atoms too close: (T0325)Y89.CA and (T0325)Y89.CB only 0.000 apart, marking (T0325)Y89.CB as missing WARNING: atoms too close: (T0325)E97.CA and (T0325)E97.CB only 0.000 apart, marking (T0325)E97.CB as missing WARNING: atoms too close: (T0325)I114.CA and (T0325)I114.CB only 0.000 apart, marking (T0325)I114.CB as missing WARNING: atoms too close: (T0325)M117.CA and (T0325)M117.CB only 0.000 apart, marking (T0325)M117.CB as missing WARNING: atoms too close: (T0325)D124.CA and (T0325)D124.CB only 0.000 apart, marking (T0325)D124.CB as missing WARNING: atoms too close: (T0325)R148.CA and (T0325)R148.CB only 0.000 apart, marking (T0325)R148.CB as missing WARNING: atoms too close: (T0325)Y150.CA and (T0325)Y150.CB only 0.000 apart, marking (T0325)Y150.CB as missing WARNING: atoms too close: (T0325)L154.CA and (T0325)L154.CB only 0.000 apart, marking (T0325)L154.CB as missing WARNING: atoms too close: (T0325)R155.CA and (T0325)R155.CB only 0.000 apart, marking (T0325)R155.CB as missing WARNING: atoms too close: (T0325)S158.CA and (T0325)S158.CB only 0.000 apart, marking (T0325)S158.CB as missing WARNING: atoms too close: (T0325)K164.CA and (T0325)K164.CB only 0.000 apart, marking (T0325)K164.CB as missing WARNING: atoms too close: (T0325)V173.CA and (T0325)V173.CB only 0.000 apart, marking (T0325)V173.CB as missing WARNING: atoms too close: (T0325)Y184.CA and (T0325)Y184.CB only 0.000 apart, marking (T0325)Y184.CB as missing WARNING: atoms too close: (T0325)I193.CA and (T0325)I193.CB only 0.000 apart, marking (T0325)I193.CB as missing WARNING: atoms too close: (T0325)L194.CA and (T0325)L194.CB only 0.000 apart, marking (T0325)L194.CB as missing WARNING: atoms too close: (T0325)Q222.CA and (T0325)Q222.CB only 0.000 apart, marking (T0325)Q222.CB as missing WARNING: atoms too close: (T0325)C228.CA and (T0325)C228.CB only 0.000 apart, marking (T0325)C228.CB as missing WARNING: atoms too close: (T0325)E236.CA and (T0325)E236.CB only 0.000 apart, marking (T0325)E236.CB as missing WARNING: atoms too close: (T0325)Q241.CA and (T0325)Q241.CB only 0.000 apart, marking (T0325)Q241.CB as missing WARNING: atoms too close: (T0325)K244.CA and (T0325)K244.CB only 0.000 apart, marking (T0325)K244.CB as missing WARNING: atoms too close: (T0325)E249.CA and (T0325)E249.CB only 0.000 apart, marking (T0325)E249.CB as missing WARNING: atoms too close: (T0325)L253.CA and (T0325)L253.CB only 0.000 apart, marking (T0325)L253.CB as missing WARNING: atoms too close: (T0325)M262.CA and (T0325)M262.CB only 0.000 apart, marking (T0325)M262.CB as missing # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation ROKKY_TS2 # ReadConformPDB reading from PDB file servers/ROKKY_TS3.pdb.gz looking for model 1 WARNING: atoms too close: (T0325)S2.CA and (T0325)S2.CB only 0.000 apart, marking (T0325)S2.CB as missing WARNING: atoms too close: (T0325)I7.CA and (T0325)I7.CB only 0.000 apart, marking (T0325)I7.CB as missing WARNING: atoms too close: (T0325)D11.CA and (T0325)D11.CB only 0.000 apart, marking (T0325)D11.CB as missing WARNING: atoms too close: (T0325)F13.CA and (T0325)F13.CB only 0.000 apart, marking (T0325)F13.CB as missing WARNING: atoms too close: (T0325)Q21.CA and (T0325)Q21.CB only 0.000 apart, marking (T0325)Q21.CB as missing WARNING: atoms too close: (T0325)L38.CA and (T0325)L38.CB only 0.000 apart, marking (T0325)L38.CB as missing WARNING: atoms too close: (T0325)T40.CA and (T0325)T40.CB only 0.000 apart, marking (T0325)T40.CB as missing WARNING: atoms too close: (T0325)S41.CA and (T0325)S41.CB only 0.000 apart, marking (T0325)S41.CB as missing WARNING: atoms too close: (T0325)P56.CA and (T0325)P56.CB only 0.000 apart, marking (T0325)P56.CB as missing WARNING: atoms too close: (T0325)T65.CA and (T0325)T65.CB only 0.000 apart, marking (T0325)T65.CB as missing WARNING: atoms too close: (T0325)S82.CA and (T0325)S82.CB only 0.000 apart, marking (T0325)S82.CB as missing WARNING: atoms too close: (T0325)V84.CA and (T0325)V84.CB only 0.000 apart, marking (T0325)V84.CB as missing WARNING: atoms too close: (T0325)F90.CA and (T0325)F90.CB only 0.000 apart, marking (T0325)F90.CB as missing WARNING: atoms too close: (T0325)V105.CA and (T0325)V105.CB only 0.000 apart, marking (T0325)V105.CB as missing WARNING: atoms too close: (T0325)I114.CA and (T0325)I114.CB only 0.000 apart, marking (T0325)I114.CB as missing WARNING: atoms too close: (T0325)H125.CA and (T0325)H125.CB only 0.000 apart, marking (T0325)H125.CB as missing WARNING: atoms too close: (T0325)D127.CA and (T0325)D127.CB only 0.000 apart, marking (T0325)D127.CB as missing WARNING: atoms too close: (T0325)K138.CA and (T0325)K138.CB only 0.000 apart, marking (T0325)K138.CB as missing WARNING: atoms too close: (T0325)A147.CA and (T0325)A147.CB only 0.000 apart, marking (T0325)A147.CB as missing WARNING: atoms too close: (T0325)K149.CA and (T0325)K149.CB only 0.000 apart, marking (T0325)K149.CB as missing WARNING: atoms too close: (T0325)Y150.CA and (T0325)Y150.CB only 0.000 apart, marking (T0325)Y150.CB as missing WARNING: atoms too close: (T0325)K164.CA and (T0325)K164.CB only 0.000 apart, marking (T0325)K164.CB as missing WARNING: atoms too close: (T0325)Q171.CA and (T0325)Q171.CB only 0.000 apart, marking (T0325)Q171.CB as missing WARNING: atoms too close: (T0325)K186.CA and (T0325)K186.CB only 0.000 apart, marking (T0325)K186.CB as missing WARNING: atoms too close: (T0325)I188.CA and (T0325)I188.CB only 0.000 apart, marking (T0325)I188.CB as missing WARNING: atoms too close: (T0325)T190.CA and (T0325)T190.CB only 0.000 apart, marking (T0325)T190.CB as missing WARNING: atoms too close: (T0325)L194.CA and (T0325)L194.CB only 0.000 apart, marking (T0325)L194.CB as missing WARNING: atoms too close: (T0325)L196.CA and (T0325)L196.CB only 0.000 apart, marking (T0325)L196.CB as missing WARNING: atoms too close: (T0325)I210.CA and (T0325)I210.CB only 0.000 apart, marking (T0325)I210.CB as missing WARNING: atoms too close: (T0325)R231.CA and (T0325)R231.CB only 0.000 apart, marking (T0325)R231.CB as missing WARNING: atoms too close: (T0325)L238.CA and (T0325)L238.CB only 0.000 apart, marking (T0325)L238.CB as missing WARNING: atoms too close: (T0325)R250.CA and (T0325)R250.CB only 0.000 apart, marking (T0325)R250.CB as missing WARNING: atoms too close: (T0325)L253.CA and (T0325)L253.CB only 0.000 apart, marking (T0325)L253.CB as missing WARNING: atoms too close: (T0325)A255.CA and (T0325)A255.CB only 0.000 apart, marking (T0325)A255.CB as missing WARNING: atoms too close: (T0325)S259.CA and (T0325)S259.CB only 0.000 apart, marking (T0325)S259.CB as missing WARNING: atoms too close: (T0325)M262.CA and (T0325)M262.CB only 0.000 apart, marking (T0325)M262.CB as missing # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation ROKKY_TS3 # ReadConformPDB reading from PDB file servers/ROKKY_TS4.pdb.gz looking for model 1 WARNING: atoms too close: (T0325)M1.CA and (T0325)M1.CB only 0.000 apart, marking (T0325)M1.CB as missing WARNING: atoms too close: (T0325)K4.CA and (T0325)K4.CB only 0.000 apart, marking (T0325)K4.CB as missing WARNING: atoms too close: (T0325)I24.CA and (T0325)I24.CB only 0.000 apart, marking (T0325)I24.CB as missing WARNING: atoms too close: (T0325)Y43.CA and (T0325)Y43.CB only 0.000 apart, marking (T0325)Y43.CB as missing WARNING: atoms too close: (T0325)R52.CA and (T0325)R52.CB only 0.000 apart, marking (T0325)R52.CB as missing WARNING: atoms too close: (T0325)P56.CA and (T0325)P56.CB only 0.000 apart, marking (T0325)P56.CB as missing WARNING: atoms too close: (T0325)L58.CA and (T0325)L58.CB only 0.000 apart, marking (T0325)L58.CB as missing WARNING: atoms too close: (T0325)A59.CA and (T0325)A59.CB only 0.000 apart, marking (T0325)A59.CB as missing WARNING: atoms too close: (T0325)I60.CA and (T0325)I60.CB only 0.000 apart, marking (T0325)I60.CB as missing WARNING: atoms too close: (T0325)T65.CA and (T0325)T65.CB only 0.000 apart, marking (T0325)T65.CB as missing WARNING: atoms too close: (T0325)R77.CA and (T0325)R77.CB only 0.000 apart, marking (T0325)R77.CB as missing WARNING: atoms too close: (T0325)E97.CA and (T0325)E97.CB only 0.000 apart, marking (T0325)E97.CB as missing WARNING: atoms too close: (T0325)N101.CA and (T0325)N101.CB only 0.000 apart, marking (T0325)N101.CB as missing WARNING: atoms too close: (T0325)I113.CA and (T0325)I113.CB only 0.000 apart, marking (T0325)I113.CB as missing WARNING: atoms too close: (T0325)F116.CA and (T0325)F116.CB only 0.000 apart, marking (T0325)F116.CB as missing WARNING: atoms too close: (T0325)M117.CA and (T0325)M117.CB only 0.000 apart, marking (T0325)M117.CB as missing WARNING: atoms too close: (T0325)R122.CA and (T0325)R122.CB only 0.000 apart, marking (T0325)R122.CB as missing WARNING: atoms too close: (T0325)D124.CA and (T0325)D124.CB only 0.000 apart, marking (T0325)D124.CB as missing WARNING: atoms too close: (T0325)H129.CA and (T0325)H129.CB only 0.000 apart, marking (T0325)H129.CB as missing WARNING: atoms too close: (T0325)A145.CA and (T0325)A145.CB only 0.000 apart, marking (T0325)A145.CB as missing WARNING: atoms too close: (T0325)L146.CA and (T0325)L146.CB only 0.000 apart, marking (T0325)L146.CB as missing WARNING: atoms too close: (T0325)K149.CA and (T0325)K149.CB only 0.000 apart, marking (T0325)K149.CB as missing WARNING: atoms too close: (T0325)Y150.CA and (T0325)Y150.CB only 0.000 apart, marking (T0325)Y150.CB as missing WARNING: atoms too close: (T0325)T163.CA and (T0325)T163.CB only 0.000 apart, marking (T0325)T163.CB as missing WARNING: atoms too close: (T0325)D177.CA and (T0325)D177.CB only 0.000 apart, marking (T0325)D177.CB as missing WARNING: atoms too close: (T0325)K186.CA and (T0325)K186.CB only 0.000 apart, marking (T0325)K186.CB as missing WARNING: atoms too close: (T0325)I193.CA and (T0325)I193.CB only 0.000 apart, marking (T0325)I193.CB as missing WARNING: atoms too close: (T0325)L197.CA and (T0325)L197.CB only 0.000 apart, marking (T0325)L197.CB as missing WARNING: atoms too close: (T0325)S203.CA and (T0325)S203.CB only 0.000 apart, marking (T0325)S203.CB as missing WARNING: atoms too close: (T0325)V207.CA and (T0325)V207.CB only 0.000 apart, marking (T0325)V207.CB as missing WARNING: atoms too close: (T0325)C212.CA and (T0325)C212.CB only 0.000 apart, marking (T0325)C212.CB as missing WARNING: atoms too close: (T0325)H213.CA and (T0325)H213.CB only 0.000 apart, marking (T0325)H213.CB as missing WARNING: atoms too close: (T0325)N223.CA and (T0325)N223.CB only 0.000 apart, marking (T0325)N223.CB as missing WARNING: atoms too close: (T0325)S225.CA and (T0325)S225.CB only 0.000 apart, marking (T0325)S225.CB as missing WARNING: atoms too close: (T0325)L238.CA and (T0325)L238.CB only 0.000 apart, marking (T0325)L238.CB as missing WARNING: atoms too close: (T0325)L253.CA and (T0325)L253.CB only 0.000 apart, marking (T0325)L253.CB as missing WARNING: atoms too close: (T0325)A255.CA and (T0325)A255.CB only 0.000 apart, marking (T0325)A255.CB as missing WARNING: atoms too close: (T0325)S259.CA and (T0325)S259.CB only 0.000 apart, marking (T0325)S259.CB as missing # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation ROKKY_TS4 # ReadConformPDB reading from PDB file servers/ROKKY_TS5.pdb.gz looking for model 1 WARNING: atoms too close: (T0325)S2.CA and (T0325)S2.CB only 0.000 apart, marking (T0325)S2.CB as missing WARNING: atoms too close: (T0325)N9.CA and (T0325)N9.CB only 0.000 apart, marking (T0325)N9.CB as missing WARNING: atoms too close: (T0325)Q21.CA and (T0325)Q21.CB only 0.000 apart, marking (T0325)Q21.CB as missing WARNING: atoms too close: (T0325)I24.CA and (T0325)I24.CB only 0.000 apart, marking (T0325)I24.CB as missing WARNING: atoms too close: (T0325)M48.CA and (T0325)M48.CB only 0.000 apart, marking (T0325)M48.CB as missing WARNING: atoms too close: (T0325)A51.CA and (T0325)A51.CB only 0.000 apart, marking (T0325)A51.CB as missing WARNING: atoms too close: (T0325)A55.CA and (T0325)A55.CB only 0.000 apart, marking (T0325)A55.CB as missing WARNING: atoms too close: (T0325)L58.CA and (T0325)L58.CB only 0.000 apart, marking (T0325)L58.CB as missing WARNING: atoms too close: (T0325)I60.CA and (T0325)I60.CB only 0.000 apart, marking (T0325)I60.CB as missing WARNING: atoms too close: (T0325)L64.CA and (T0325)L64.CB only 0.000 apart, marking (T0325)L64.CB as missing WARNING: atoms too close: (T0325)Q70.CA and (T0325)Q70.CB only 0.000 apart, marking (T0325)Q70.CB as missing WARNING: atoms too close: (T0325)K72.CA and (T0325)K72.CB only 0.000 apart, marking (T0325)K72.CB as missing WARNING: atoms too close: (T0325)M79.CA and (T0325)M79.CB only 0.000 apart, marking (T0325)M79.CB as missing WARNING: atoms too close: (T0325)A87.CA and (T0325)A87.CB only 0.000 apart, marking (T0325)A87.CB as missing WARNING: atoms too close: (T0325)F90.CA and (T0325)F90.CB only 0.000 apart, marking (T0325)F90.CB as missing WARNING: atoms too close: (T0325)V100.CA and (T0325)V100.CB only 0.000 apart, marking (T0325)V100.CB as missing WARNING: atoms too close: (T0325)N101.CA and (T0325)N101.CB only 0.000 apart, marking (T0325)N101.CB as missing WARNING: atoms too close: (T0325)V105.CA and (T0325)V105.CB only 0.000 apart, marking (T0325)V105.CB as missing WARNING: atoms too close: (T0325)H125.CA and (T0325)H125.CB only 0.000 apart, marking (T0325)H125.CB as missing WARNING: atoms too close: (T0325)H130.CA and (T0325)H130.CB only 0.000 apart, marking (T0325)H130.CB as missing WARNING: atoms too close: (T0325)K149.CA and (T0325)K149.CB only 0.000 apart, marking (T0325)K149.CB as missing WARNING: atoms too close: (T0325)L152.CA and (T0325)L152.CB only 0.000 apart, marking (T0325)L152.CB as missing WARNING: atoms too close: (T0325)A157.CA and (T0325)A157.CB only 0.000 apart, marking (T0325)A157.CB as missing WARNING: atoms too close: (T0325)L169.CA and (T0325)L169.CB only 0.000 apart, marking (T0325)L169.CB as missing WARNING: atoms too close: (T0325)Q171.CA and (T0325)Q171.CB only 0.000 apart, marking (T0325)Q171.CB as missing WARNING: atoms too close: (T0325)T175.CA and (T0325)T175.CB only 0.000 apart, marking (T0325)T175.CB as missing WARNING: atoms too close: (T0325)L180.CA and (T0325)L180.CB only 0.000 apart, marking (T0325)L180.CB as missing WARNING: atoms too close: (T0325)Q182.CA and (T0325)Q182.CB only 0.000 apart, marking (T0325)Q182.CB as missing WARNING: atoms too close: (T0325)F183.CA and (T0325)F183.CB only 0.000 apart, marking (T0325)F183.CB as missing WARNING: atoms too close: (T0325)S189.CA and (T0325)S189.CB only 0.000 apart, marking (T0325)S189.CB as missing WARNING: atoms too close: (T0325)E206.CA and (T0325)E206.CB only 0.000 apart, marking (T0325)E206.CB as missing WARNING: atoms too close: (T0325)F208.CA and (T0325)F208.CB only 0.000 apart, marking (T0325)F208.CB as missing WARNING: atoms too close: (T0325)H213.CA and (T0325)H213.CB only 0.000 apart, marking (T0325)H213.CB as missing WARNING: atoms too close: (T0325)I232.CA and (T0325)I232.CB only 0.000 apart, marking (T0325)I232.CB as missing WARNING: atoms too close: (T0325)E236.CA and (T0325)E236.CB only 0.000 apart, marking (T0325)E236.CB as missing WARNING: atoms too close: (T0325)K244.CA and (T0325)K244.CB only 0.000 apart, marking (T0325)K244.CB as missing WARNING: atoms too close: (T0325)A246.CA and (T0325)A246.CB only 0.000 apart, marking (T0325)A246.CB as missing WARNING: atoms too close: (T0325)R250.CA and (T0325)R250.CB only 0.000 apart, marking (T0325)R250.CB as missing WARNING: atoms too close: (T0325)A255.CA and (T0325)A255.CB only 0.000 apart, marking (T0325)A255.CB as missing WARNING: atoms too close: (T0325)M262.CA and (T0325)M262.CB only 0.000 apart, marking (T0325)M262.CB as missing # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation ROKKY_TS5 # ReadConformPDB reading from PDB file servers/SAM-T02_AL1.pdb.gz looking for model 1 Skipped atom 2, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 4, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 6, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 8, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 10, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 12, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 14, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 16, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 18, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 20, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 22, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 24, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 94, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 96, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 98, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 100, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 102, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 104, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 106, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 108, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 122, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 124, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 126, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 128, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 142, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 144, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 146, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 148, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 170, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 172, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 174, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 176, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 190, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 192, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 194, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 196, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 242, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 244, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 246, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 248, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 250, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 252, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 254, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 256, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 258, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 260, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 262, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 264, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 278, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 280, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 282, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 284, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 286, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 288, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 290, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 292, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 294, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 296, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 298, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz Skipped atom 300, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL1.pdb.gz # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL1 # ReadConformPDB reading from PDB file servers/SAM-T02_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL2 # ReadConformPDB reading from PDB file servers/SAM-T02_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL3 # ReadConformPDB reading from PDB file servers/SAM-T02_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL4 # ReadConformPDB reading from PDB file servers/SAM-T02_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL5 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS1.pdb.gz looking for model 1 # Found a chain break before 257 # copying to AlignedFragments data structure # naming current conformation SAM_T06_server_TS1 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS2 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS3 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS4 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS5 # ReadConformPDB reading from PDB file servers/SP3_TS1.pdb.gz looking for model 1 # Found a chain break before 228 # copying to AlignedFragments data structure # naming current conformation SP3_TS1 # ReadConformPDB reading from PDB file servers/SP3_TS2.pdb.gz looking for model 1 # Found a chain break before 223 # copying to AlignedFragments data structure # naming current conformation SP3_TS2 # ReadConformPDB reading from PDB file servers/SP3_TS3.pdb.gz looking for model 1 # Found a chain break before 155 # copying to AlignedFragments data structure # naming current conformation SP3_TS3 # ReadConformPDB reading from PDB file servers/SP3_TS4.pdb.gz looking for model 1 # Found a chain break before 208 # copying to AlignedFragments data structure # naming current conformation SP3_TS4 # ReadConformPDB reading from PDB file servers/SP3_TS5.pdb.gz looking for model 1 # Found a chain break before 260 # copying to AlignedFragments data structure # naming current conformation SP3_TS5 # ReadConformPDB reading from PDB file servers/SP4_TS1.pdb.gz looking for model 1 # Found a chain break before 83 # copying to AlignedFragments data structure # naming current conformation SP4_TS1 # ReadConformPDB reading from PDB file servers/SP4_TS2.pdb.gz looking for model 1 # Found a chain break before 254 # copying to AlignedFragments data structure # naming current conformation SP4_TS2 # ReadConformPDB reading from PDB file servers/SP4_TS3.pdb.gz looking for model 1 # Found a chain break before 260 # copying to AlignedFragments data structure # naming current conformation SP4_TS3 # ReadConformPDB reading from PDB file servers/SP4_TS4.pdb.gz looking for model 1 # Found a chain break before 213 # copying to AlignedFragments data structure # naming current conformation SP4_TS4 # ReadConformPDB reading from PDB file servers/SP4_TS5.pdb.gz looking for model 1 # Found a chain break before 236 # copying to AlignedFragments data structure # naming current conformation SP4_TS5 # ReadConformPDB reading from PDB file servers/SPARKS2_TS1.pdb.gz looking for model 1 # Found a chain break before 188 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS1 # ReadConformPDB reading from PDB file servers/SPARKS2_TS2.pdb.gz looking for model 1 # Found a chain break before 236 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS2 # ReadConformPDB reading from PDB file servers/SPARKS2_TS3.pdb.gz looking for model 1 # Found a chain break before 241 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS3 # ReadConformPDB reading from PDB file servers/SPARKS2_TS4.pdb.gz looking for model 1 # Found a chain break before 256 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS4 # ReadConformPDB reading from PDB file servers/SPARKS2_TS5.pdb.gz looking for model 1 # Found a chain break before 189 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS5 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS1 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS2 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS3 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS4 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS5 # ReadConformPDB reading from PDB file servers/UNI-EID_expm_TS1.pdb.gz looking for model 1 WARNING: atoms too close: (T0325)A157.CA and (T0325)D177.CA only 0.000 apart, marking (T0325)D177.CA as missing WARNING: atoms too close: (T0325)S158.CA and (T0325)E178.CA only 0.000 apart, marking (T0325)E178.CA as missing # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_expm_TS1 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL1 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL2.pdb.gz looking for model 1 Skipped atom 13, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 14, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 15, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 16, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 25, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 26, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 27, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 28, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 157, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 158, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 159, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 160, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 165, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 166, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 167, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 168, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 193, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 206, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 207, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 208, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 209, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 310, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 311, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 312, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 313, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 314, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 327, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 328, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 329, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 330, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 383, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 384, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 385, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz Skipped atom 386, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL2 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL3.pdb.gz looking for model 1 Skipped atom 57, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 170, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 255, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 308, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 313, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 366, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 419, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 420, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 465, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 526, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 675, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 688, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz Skipped atom 705, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL3.pdb.gz # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL3 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL4.pdb.gz looking for model 1 Skipped atom 139, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL4.pdb.gz Skipped atom 152, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL4.pdb.gz Skipped atom 221, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL4.pdb.gz Skipped atom 266, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL4.pdb.gz Skipped atom 311, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL4.pdb.gz Skipped atom 316, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL4.pdb.gz # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL4 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL5 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS1.pdb.gz looking for model 1 # Found a chain break before 251 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS1 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS2.pdb.gz looking for model 1 # Found a chain break before 251 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS2 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS3.pdb.gz looking for model 1 # Found a chain break before 256 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS3 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS4.pdb.gz looking for model 1 # Found a chain break before 255 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS4 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS5.pdb.gz looking for model 1 # Found a chain break before 226 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS5 # ReadConformPDB reading from PDB file servers/beautshot_TS1.pdb.gz looking for model 1 # Found a chain break before 260 # copying to AlignedFragments data structure # naming current conformation beautshot_TS1 # ReadConformPDB reading from PDB file servers/beautshotbase_TS1.pdb.gz looking for model 1 # Found a chain break before 261 # copying to AlignedFragments data structure # naming current conformation beautshotbase_TS1 # ReadConformPDB reading from PDB file servers/forecast-s_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation forecast-s_AL1 # ReadConformPDB reading from PDB file servers/forecast-s_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation forecast-s_AL2 # ReadConformPDB reading from PDB file servers/forecast-s_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation forecast-s_AL3 # ReadConformPDB reading from PDB file servers/forecast-s_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation forecast-s_AL4 # ReadConformPDB reading from PDB file servers/forecast-s_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation forecast-s_AL5 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS1.pdb.gz looking for model 1 # Found a chain break before 158 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS1 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS2.pdb.gz looking for model 1 # Found a chain break before 169 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS2 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS3.pdb.gz looking for model 1 # Found a chain break before 221 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS3 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS4.pdb.gz looking for model 1 # Found a chain break before 167 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS4 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS5.pdb.gz looking for model 1 # Found a chain break before 256 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS5 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS1.pdb.gz looking for model 1 WARNING: atoms too close: (T0325)N9.O and (T0325)A10.N only 0.000 apart, marking (T0325)A10.N as missing # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS1 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS2.pdb.gz looking for model 1 WARNING: atoms too close: (T0325)S2.O and (T0325)N3.N only 0.000 apart, marking (T0325)N3.N as missing # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS2 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS3.pdb.gz looking for model 1 # Found a chain break before 259 # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS3 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS4.pdb.gz looking for model 1 WARNING: atoms too close: (T0325)A87.O and (T0325)G88.N only 0.000 apart, marking (T0325)G88.N as missing # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS4 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS5.pdb.gz looking for model 1 WARNING: atoms too close: (T0325)T33.O and (T0325)S34.N only 0.000 apart, marking (T0325)S34.N as missing WARNING: atoms too close: (T0325)A87.O and (T0325)G88.N only 0.000 apart, marking (T0325)G88.N as missing # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS5 # ReadConformPDB reading from PDB file servers/karypis.srv_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS1 # ReadConformPDB reading from PDB file servers/karypis.srv_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS2 # ReadConformPDB reading from PDB file servers/karypis.srv_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS3 # ReadConformPDB reading from PDB file servers/karypis.srv_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS4 # ReadConformPDB reading from PDB file servers/karypis.srv_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS5 # ReadConformPDB reading from PDB file servers/keasar-server_TS1.pdb.gz looking for model 1 # Found a chain break before 259 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS1 # ReadConformPDB reading from PDB file servers/keasar-server_TS2.pdb.gz looking for model 1 # Found a chain break before 240 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS2 # ReadConformPDB reading from PDB file servers/keasar-server_TS3.pdb.gz looking for model 1 # Found a chain break before 232 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS3 # ReadConformPDB reading from PDB file servers/keasar-server_TS4.pdb.gz looking for model 1 # Found a chain break before 232 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS4 # ReadConformPDB reading from PDB file servers/keasar-server_TS5.pdb.gz looking for model 1 # Found a chain break before 260 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS5 # ReadConformPDB reading from PDB file servers/mGen-3D_TS1.pdb.gz looking for model 1 WARNING: atom 903 has residue number 1 < previous residue 262 in servers/mGen-3D_TS1.pdb.gz # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation mGen-3D_TS1 # ReadConformPDB reading from PDB file servers/nFOLD_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation nFOLD_TS1 # ReadConformPDB reading from PDB file servers/nFOLD_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation nFOLD_TS2 # ReadConformPDB reading from PDB file servers/nFOLD_TS3.pdb.gz looking for model 1 WARNING: atom 1 has residue number 32 < previous residue 262 in servers/nFOLD_TS3.pdb.gz # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation nFOLD_TS3 # ReadConformPDB reading from PDB file servers/nFOLD_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation nFOLD_TS4 # ReadConformPDB reading from PDB file servers/nFOLD_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation nFOLD_TS5 # ReadConformPDB reading from PDB file servers/panther2_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # naming current conformation panther2_TS1 # ReadConformPDB reading from PDB file servers/shub_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0325 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation shub_TS1 # command:Using radius: 8.0000 Metaserver mode NUMB_ALIGNS: 254 model score 1.8665 model score 1.8783 model score 1.8751 model score 1.8701 model score 1.8752 model score 1.3634 model score 1.4381 model score 1.3865 model score 1.7220 model score 1.4010 model score 1.7857 model score 1.1271 model score 1.7646 model score 1.0341 model score 2.0294 model score 2.2270 model score 1.9871 model score 1.8717 model score 1.4602 model score 1.7150 model score 1.7979 model score 1.7041 model score 1.7353 model score 0.6218 model score 2.0329 model score 1.7781 model score 1.8759 model score 1.5561 model score 2.1705 model score 0.6240 model score 0.5813 model score 0.5717 model score 0.6391 model score 0.5642 model score 1.1998 model score 1.1771 model score 1.5708 model score 1.7319 model score 1.3738 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 0.5740 model score 0.5595 model score 0.8644 model score 0.6480 model score 0.6027 model score 0.5727 model score 0.5717 model score 0.5642 model score 0.5813 model score 0.6391 model score 1.0363 model score 2.2644 model score 1.8559 model score 1.4776 model score 2.2430 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 2.4970 model score 2.4293 model score 2.3221 model score 2.4951 model score 2.3565 model score 1.4463 model score 2.2294 model score 1.9986 model score 1.5691 model score 1.2386 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 0.6239 model score 0.7493 model score 1.5376 model score 1.3776 model score 1.5707 model score 0.8072 model score 1.2350 model score 0.7164 model score 0.7282 model score 0.7131 model score 0.7475 model score 0.6495 model score 0.6860 model score 1.4838 model score 1.2395 model score 0.9093 model score 1.3299 model score 1.3746 model score 1.4407 model score 1.4745 model score 1.6705 model score 1.0101 model score 1.4068 model score 1.5305 model score 2.0793 model score 1.3884 model score 1.6935 model score 2.1178 model score 2.3332 model score 1.3884 model score 1.6064 model score 1.4493 model score 1.5283 model score 0.2583 model score 0.2723 model score 0.3800 model score 0.2407 model score 0.2523 model score 1.4407 model score 2.2751 model score 2.2180 model score 1.9477 model score 2.0915 model score 1.9916 model score 1.0959 model score 1.0674 model score 1.0845 model score 1.0734 model score 1.0516 model score 0.7160 model score 0.8267 model score 0.6135 model score 1.4312 model score 1.0850 model score 0.7290 model score 1.0974 model score 1.1208 model score 0.9242 model score 1.1298 model score 0.6060 model score 0.8656 model score 0.8980 model score 0.8707 model score 1.1516 model score 1.3513 model score 0.5849 model score 0.6099 model score 0.6179 model score 0.6112 model score 0.7312 model score 0.6153 model score 1.0477 model score 1.1541 model score 1.1048 model score 0.6768 model score 1.1734 model score 1.5049 model score 0.7034 model score 0.9643 model score 0.6615 model score 1.1513 model score 0.6731 model score 0.9596 model score 0.6675 model score 0.8922 model score 0.7312 model score 0.7052 model score 0.6179 model score 0.6112 model score 0.7245 model score 2.1866 model score 2.0616 model score 1.8237 model score 1.7592 model score 1.9306 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 0.4841 model score 0.3665 model score 0.8665 model score 0.5066 model score 0.4835 model score 0.6153 model score 1.0477 model score 1.6365 model score 1.2302 model score 1.0929 model score 0.5949 model score 1.0146 model score 0.5761 model score 1.3796 model score 1.2999 model score 0.6199 model score 0.6704 model score 1.0507 model score 1.2894 model score 1.8941 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 0.4971 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 0.3562 model score 0.4031 model score 0.3248 model score 0.3464 model score 0.3425 model score 0.5195 model score 0.5928 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.2771 model score 1.5080 model score 1.5099 model score 2.1700 model score 1.5353 model score 2.1963 model score 2.1626 model score 2.2729 model score 2.4352 model score 2.4916 model score 2.3178 model score 1.5856 model score 1.0765 model score 1.1015 model score 1.8840 model score 1.0351 model score 1.1381 model score 1.1364 model score 0.7301 model score 1.1108 model score 0.8123 model score 0.6499 model score 1.8450 model score 1.4302 model score 1.5074 model score 1.3310 model score 1.2000 model score 1.6139 model score 0.8679 weight: 0.3515 eval: 1.8665 min: 0.2407 max: 2.4970 weight: 0.3468 eval: 1.8783 min: 0.2407 max: 2.4970 weight: 0.3481 eval: 1.8751 min: 0.2407 max: 2.4970 weight: 0.3500 eval: 1.8701 min: 0.2407 max: 2.4970 weight: 0.3480 eval: 1.8752 min: 0.2407 max: 2.4970 weight: 0.5522 eval: 1.3634 min: 0.2407 max: 2.4970 weight: 0.5224 eval: 1.4381 min: 0.2407 max: 2.4970 weight: 0.5430 eval: 1.3865 min: 0.2407 max: 2.4970 weight: 0.4091 eval: 1.7220 min: 0.2407 max: 2.4970 weight: 0.5372 eval: 1.4010 min: 0.2407 max: 2.4970 weight: 0.3837 eval: 1.7857 min: 0.2407 max: 2.4970 weight: 0.6464 eval: 1.1271 min: 0.2407 max: 2.4970 weight: 0.3921 eval: 1.7646 min: 0.2407 max: 2.4970 weight: 0.6835 eval: 1.0341 min: 0.2407 max: 2.4970 weight: 0.2865 eval: 2.0294 min: 0.2407 max: 2.4970 weight: 0.2077 eval: 2.2270 min: 0.2407 max: 2.4970 weight: 0.3034 eval: 1.9871 min: 0.2407 max: 2.4970 weight: 0.3494 eval: 1.8717 min: 0.2407 max: 2.4970 weight: 0.5136 eval: 1.4602 min: 0.2407 max: 2.4970 weight: 0.4119 eval: 1.7150 min: 0.2407 max: 2.4970 weight: 0.3789 eval: 1.7979 min: 0.2407 max: 2.4970 weight: 0.4163 eval: 1.7041 min: 0.2407 max: 2.4970 weight: 0.4038 eval: 1.7353 min: 0.2407 max: 2.4970 weight: 0.8480 eval: 0.6218 min: 0.2407 max: 2.4970 weight: 0.2851 eval: 2.0329 min: 0.2407 max: 2.4970 weight: 0.3868 eval: 1.7781 min: 0.2407 max: 2.4970 weight: 0.3478 eval: 1.8759 min: 0.2407 max: 2.4970 weight: 0.4753 eval: 1.5561 min: 0.2407 max: 2.4970 weight: 0.2302 eval: 2.1705 min: 0.2407 max: 2.4970 weight: 0.8471 eval: 0.6240 min: 0.2407 max: 2.4970 weight: 0.8641 eval: 0.5813 min: 0.2407 max: 2.4970 weight: 0.8680 eval: 0.5717 min: 0.2407 max: 2.4970 weight: 0.8411 eval: 0.6391 min: 0.2407 max: 2.4970 weight: 0.8710 eval: 0.5642 min: 0.2407 max: 2.4970 weight: 0.6174 eval: 1.1998 min: 0.2407 max: 2.4970 weight: 0.6265 eval: 1.1771 min: 0.2407 max: 2.4970 weight: 0.4694 eval: 1.5708 min: 0.2407 max: 2.4970 weight: 0.4052 eval: 1.7319 min: 0.2407 max: 2.4970 weight: 0.5480 eval: 1.3738 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.8671 eval: 0.5740 min: 0.2407 max: 2.4970 weight: 0.8728 eval: 0.5595 min: 0.2407 max: 2.4970 weight: 0.7512 eval: 0.8644 min: 0.2407 max: 2.4970 weight: 0.8375 eval: 0.6480 min: 0.2407 max: 2.4970 weight: 0.8556 eval: 0.6027 min: 0.2407 max: 2.4970 weight: 0.8676 eval: 0.5727 min: 0.2407 max: 2.4970 weight: 0.8680 eval: 0.5717 min: 0.2407 max: 2.4970 weight: 0.8710 eval: 0.5642 min: 0.2407 max: 2.4970 weight: 0.8641 eval: 0.5813 min: 0.2407 max: 2.4970 weight: 0.8411 eval: 0.6391 min: 0.2407 max: 2.4970 weight: 0.6826 eval: 1.0363 min: 0.2407 max: 2.4970 weight: 0.1928 eval: 2.2644 min: 0.2407 max: 2.4970 weight: 0.3557 eval: 1.8559 min: 0.2407 max: 2.4970 weight: 0.5066 eval: 1.4776 min: 0.2407 max: 2.4970 weight: 0.2013 eval: 2.2430 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.1000 eval: 2.4970 min: 0.2407 max: 2.4970 weight: 0.1270 eval: 2.4293 min: 0.2407 max: 2.4970 weight: 0.1698 eval: 2.3221 min: 0.2407 max: 2.4970 weight: 0.1008 eval: 2.4951 min: 0.2407 max: 2.4970 weight: 0.1561 eval: 2.3565 min: 0.2407 max: 2.4970 weight: 0.5191 eval: 1.4463 min: 0.2407 max: 2.4970 weight: 0.2067 eval: 2.2294 min: 0.2407 max: 2.4970 weight: 0.2988 eval: 1.9986 min: 0.2407 max: 2.4970 weight: 0.4701 eval: 1.5691 min: 0.2407 max: 2.4970 weight: 0.6019 eval: 1.2386 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.8471 eval: 0.6239 min: 0.2407 max: 2.4970 weight: 0.7971 eval: 0.7493 min: 0.2407 max: 2.4970 weight: 0.4827 eval: 1.5376 min: 0.2407 max: 2.4970 weight: 0.5465 eval: 1.3776 min: 0.2407 max: 2.4970 weight: 0.4695 eval: 1.5707 min: 0.2407 max: 2.4970 weight: 0.7740 eval: 0.8072 min: 0.2407 max: 2.4970 weight: 0.6034 eval: 1.2350 min: 0.2407 max: 2.4970 weight: 0.8103 eval: 0.7164 min: 0.2407 max: 2.4970 weight: 0.8056 eval: 0.7282 min: 0.2407 max: 2.4970 weight: 0.8116 eval: 0.7131 min: 0.2407 max: 2.4970 weight: 0.7979 eval: 0.7475 min: 0.2407 max: 2.4970 weight: 0.8370 eval: 0.6495 min: 0.2407 max: 2.4970 weight: 0.8224 eval: 0.6860 min: 0.2407 max: 2.4970 weight: 0.5041 eval: 1.4838 min: 0.2407 max: 2.4970 weight: 0.6016 eval: 1.2395 min: 0.2407 max: 2.4970 weight: 0.7333 eval: 0.9093 min: 0.2407 max: 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weight: 0.9444 eval: 0.3800 min: 0.2407 max: 2.4970 weight: 1.0000 eval: 0.2407 min: 0.2407 max: 2.4970 weight: 0.9954 eval: 0.2523 min: 0.2407 max: 2.4970 weight: 0.5214 eval: 1.4407 min: 0.2407 max: 2.4970 weight: 0.1885 eval: 2.2751 min: 0.2407 max: 2.4970 weight: 0.2113 eval: 2.2180 min: 0.2407 max: 2.4970 weight: 0.3191 eval: 1.9477 min: 0.2407 max: 2.4970 weight: 0.2618 eval: 2.0915 min: 0.2407 max: 2.4970 weight: 0.3016 eval: 1.9916 min: 0.2407 max: 2.4970 weight: 0.6589 eval: 1.0959 min: 0.2407 max: 2.4970 weight: 0.6702 eval: 1.0674 min: 0.2407 max: 2.4970 weight: 0.6634 eval: 1.0845 min: 0.2407 max: 2.4970 weight: 0.6679 eval: 1.0734 min: 0.2407 max: 2.4970 weight: 0.6765 eval: 1.0516 min: 0.2407 max: 2.4970 weight: 0.8104 eval: 0.7160 min: 0.2407 max: 2.4970 weight: 0.7663 eval: 0.8267 min: 0.2407 max: 2.4970 weight: 0.8513 eval: 0.6135 min: 0.2407 max: 2.4970 weight: 0.5251 eval: 1.4312 min: 0.2407 max: 2.4970 weight: 0.6632 eval: 1.0850 min: 0.2407 max: 2.4970 weight: 0.8053 eval: 0.7290 min: 0.2407 max: 2.4970 weight: 0.6583 eval: 1.0974 min: 0.2407 max: 2.4970 weight: 0.6490 eval: 1.1208 min: 0.2407 max: 2.4970 weight: 0.7274 eval: 0.9242 min: 0.2407 max: 2.4970 weight: 0.6454 eval: 1.1298 min: 0.2407 max: 2.4970 weight: 0.8543 eval: 0.6060 min: 0.2407 max: 2.4970 weight: 0.7507 eval: 0.8656 min: 0.2407 max: 2.4970 weight: 0.7378 eval: 0.8980 min: 0.2407 max: 2.4970 weight: 0.7487 eval: 0.8707 min: 0.2407 max: 2.4970 weight: 0.6367 eval: 1.1516 min: 0.2407 max: 2.4970 weight: 0.5570 eval: 1.3513 min: 0.2407 max: 2.4970 weight: 0.8627 eval: 0.5849 min: 0.2407 max: 2.4970 weight: 0.8527 eval: 0.6099 min: 0.2407 max: 2.4970 weight: 0.8495 eval: 0.6179 min: 0.2407 max: 2.4970 weight: 0.8522 eval: 0.6112 min: 0.2407 max: 2.4970 weight: 0.8044 eval: 0.7312 min: 0.2407 max: 2.4970 weight: 0.8506 eval: 0.6153 min: 0.2407 max: 2.4970 weight: 0.6781 eval: 1.0477 min: 0.2407 max: 2.4970 weight: 0.6357 eval: 1.1541 min: 0.2407 max: 2.4970 weight: 0.6553 eval: 1.1048 min: 0.2407 max: 2.4970 weight: 0.8261 eval: 0.6768 min: 0.2407 max: 2.4970 weight: 0.6280 eval: 1.1734 min: 0.2407 max: 2.4970 weight: 0.4957 eval: 1.5049 min: 0.2407 max: 2.4970 weight: 0.8154 eval: 0.7034 min: 0.2407 max: 2.4970 weight: 0.7114 eval: 0.9643 min: 0.2407 max: 2.4970 weight: 0.8322 eval: 0.6615 min: 0.2407 max: 2.4970 weight: 0.6368 eval: 1.1513 min: 0.2407 max: 2.4970 weight: 0.8275 eval: 0.6731 min: 0.2407 max: 2.4970 weight: 0.7132 eval: 0.9596 min: 0.2407 max: 2.4970 weight: 0.8298 eval: 0.6675 min: 0.2407 max: 2.4970 weight: 0.7401 eval: 0.8922 min: 0.2407 max: 2.4970 weight: 0.8044 eval: 0.7312 min: 0.2407 max: 2.4970 weight: 0.8147 eval: 0.7052 min: 0.2407 max: 2.4970 weight: 0.8495 eval: 0.6179 min: 0.2407 max: 2.4970 weight: 0.8522 eval: 0.6112 min: 0.2407 max: 2.4970 weight: 0.8070 eval: 0.7245 min: 0.2407 max: 2.4970 weight: 0.2238 eval: 2.1866 min: 0.2407 max: 2.4970 weight: 0.2737 eval: 2.0616 min: 0.2407 max: 2.4970 weight: 0.3686 eval: 1.8237 min: 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weight: 0.9539 eval: 0.3562 min: 0.2407 max: 2.4970 weight: 0.9352 eval: 0.4031 min: 0.2407 max: 2.4970 weight: 0.9665 eval: 0.3248 min: 0.2407 max: 2.4970 weight: 0.9579 eval: 0.3464 min: 0.2407 max: 2.4970 weight: 0.9594 eval: 0.3425 min: 0.2407 max: 2.4970 weight: 0.8888 eval: 0.5195 min: 0.2407 max: 2.4970 weight: 0.8596 eval: 0.5928 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.5866 eval: 1.2771 min: 0.2407 max: 2.4970 weight: 0.4945 eval: 1.5080 min: 0.2407 max: 2.4970 weight: 0.4938 eval: 1.5099 min: 0.2407 max: 2.4970 weight: 0.2304 eval: 2.1700 min: 0.2407 max: 2.4970 weight: 0.4836 eval: 1.5353 min: 0.2407 max: 2.4970 weight: 0.2200 eval: 2.1963 min: 0.2407 max: 2.4970 weight: 0.2334 eval: 2.1626 min: 0.2407 max: 2.4970 weight: 0.1894 eval: 2.2729 min: 0.2407 max: 2.4970 weight: 0.1247 eval: 2.4352 min: 0.2407 max: 2.4970 weight: 0.1022 eval: 2.4916 min: 0.2407 max: 2.4970 weight: 0.1715 eval: 2.3178 min: 0.2407 max: 2.4970 weight: 0.4635 eval: 1.5856 min: 0.2407 max: 2.4970 weight: 0.6666 eval: 1.0765 min: 0.2407 max: 2.4970 weight: 0.6567 eval: 1.1015 min: 0.2407 max: 2.4970 weight: 0.3445 eval: 1.8840 min: 0.2407 max: 2.4970 weight: 0.6831 eval: 1.0351 min: 0.2407 max: 2.4970 weight: 0.6421 eval: 1.1381 min: 0.2407 max: 2.4970 weight: 0.6427 eval: 1.1364 min: 0.2407 max: 2.4970 weight: 0.8048 eval: 0.7301 min: 0.2407 max: 2.4970 weight: 0.6530 eval: 1.1108 min: 0.2407 max: 2.4970 weight: 0.7720 eval: 0.8123 min: 0.2407 max: 2.4970 weight: 0.8368 eval: 0.6499 min: 0.2407 max: 2.4970 weight: 0.3601 eval: 1.8450 min: 0.2407 max: 2.4970 weight: 0.5255 eval: 1.4302 min: 0.2407 max: 2.4970 weight: 0.4947 eval: 1.5074 min: 0.2407 max: 2.4970 weight: 0.5651 eval: 1.3310 min: 0.2407 max: 2.4970 weight: 0.6174 eval: 1.2000 min: 0.2407 max: 2.4970 weight: 0.4522 eval: 1.6139 min: 0.2407 max: 2.4970 weight: 0.7498 eval: 0.8679 min: 0.2407 max: 2.4970 Adding 19999 constraints to all2.constraints Done adding distance constraints # command:Reading probabilities from probabilities.dat Reading constraints from ConstraintSet all2.constraints maxweight: 1.0000 Optimizing... Probability sum: -480.1309, CN propb: -480.1309 weights: 0.2251 constraints: 1309 # command:Found ConstraintSet # PrintContacts align.constraints_meta02 Number of constraints in align2.constraints 1309 # command:Found ConstraintSet # PrintContacts align_bonus.constraints_meta02 Number of constraints in align2.constraints.bonus 1309 # command:Found ConstraintSet # PrintContacts rejected.constraints_meta02 Number of constraints in rejected2.constraints 18690 # command:Found ConstraintSet # PrintContacts rejected_bonus.constraints_meta02 Number of constraints in rejected2.constraints.bonus 18690 # command:Found ConstraintSet # PrintContacts non_contacts.constraints_meta02 Number of constraints in noncontact2.constraints 0 # command:Found ConstraintSet # PrintContacts non_contacts_bonus.constraints_meta02 Number of constraints in noncontact2.constraints.bonus 0 # command:Found ConstraintSet # PrintContacts all.constraints_meta02 Number of constraints in all2.constraints 19999 # command: