# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/
# command:# reading dunbrack-2191.atoms
#
#computed average backbone with maximum peptide_sq_deviance = 0.002
# computed average trans backbone unit from 53157 examples
# computed average trans backbone unit before proline from 2010 examples
# computed average cis backbone unit from 97 examples
# trans (non-proline) backbone unit:
#	  CA= -2.2087 1.0126 -0.0030
#	   O= -0.1499 2.2440 0.0016
#	   C= -0.6889 1.1368 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4581 -0.0000 0.0000
# cis backbone unit:
#	  CA= -0.1436 2.4534 -0.0002
#	   O= -2.0284 0.9742 0.0015
#	   C= -0.8018 1.0771 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4668 0.0000 0.0000
# trans backbone unit before proline:
#	  CA= -2.2100 1.0631 -0.0014
#	   O= -0.1236 2.2458 0.0075
#	   C= -0.6872 1.1517 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4660 0.0000 0.0000


# After reading dunbrack-2191.atoms have 2191 chains in training database
#  Count of chains,residues,atoms: 2191,500310,3902258
#  493341 residues have no bad marker
#  3226 residues lack atoms needed to compute omega
#  1453 residues have cis peptide
#  number of each bad type:
#	NON_STANDARD_RESIDUE	4
#	HAS_OXT	1167
#	TOO_MANY_ATOMS	1
#	TOO_FEW_ATOMS	3052
#	HAS_UNKNOWN_ATOMS	9
#	HAS_DUPLICATE_ATOMS	0
#	CHAIN_BREAK_BEFORE	979
#	NON_PLANAR_PEPTIDE	888
#	BAD_PEPTIDE	2680
#  Note: may sum to more than number of residues, 
#    because one residue may have multiple problems
# command:# Reading rotamer library from dunbrack-2191.rot
# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/
# command:# ReadAtomType exp-pdb.types
Read AtomType exp-pdb with 49 types.
# command:# ReadClashTable exp-pdb-2191-2symm.clash
# Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2
# command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0315/
# command:# Making conformation for sequence T0315 numbered 1 through 257
Created new target T0315 from T0315.a2m
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0315/
# command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0315//projects/compbio/experiments/protein-predict/casp7/T0315/align.constraints_v3.costfcn or /projects/compbio/experiments/protein-predict/casp7/T0315//projects/compbio/experiments/protein-predict/casp7/T0315/align.constraints_v3.costfcn.gz for input
Trying /projects/compbio/experiments/protein-predict/casp7/T0315/align.constraints_v3.costfcn
# reading script from file /projects/compbio/experiments/protein-predict/casp7/T0315/align.constraints_v3.costfcn
# future Constraint commands -> align
# future HelixConstraint commands -> align
# future StrandConstraint commands -> align
# future SheetConstraint commands -> align
# future Hbond commands -> align
# future SSbond commands -> align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)G150.CA) [> 3.5691 = 5.9486 < 7.7331] w=1.0000 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)I151.CB) [> 3.7527 = 6.2545 < 8.1308] w=0.9998 to align
# Constraint # added constraint: constraint((T0315)I125.CB, (T0315)G149.CA) [> 3.6360 = 6.0599 < 7.8779] w=0.9922 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)S174.CB) [> 3.5257 = 5.8762 < 7.6390] w=0.9847 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)G150.CA) [> 4.0623 = 6.7705 < 8.8017] w=0.9635 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)I173.CB) [> 3.7810 = 6.3017 < 8.1922] w=0.9626 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)G58.CA) [> 3.8618 = 6.4364 < 8.3673] w=0.9623 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)I151.CB) [> 3.5195 = 5.8659 < 7.6256] w=0.9552 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)M152.CB) [> 3.7120 = 6.1867 < 8.0427] w=0.9551 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)G58.CA) [> 3.4269 = 5.7115 < 7.4250] w=0.9548 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)I125.CB) [> 4.0539 = 6.7566 < 8.7836] w=0.9473 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)I126.CB) [> 3.8298 = 6.3830 < 8.2979] w=0.9473 to align
# Constraint # added constraint: constraint((T0315)I115.CB, (T0315)I125.CB) [> 3.7731 = 6.2885 < 8.1751] w=0.9407 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)I59.CB) [> 3.9704 = 6.6173 < 8.6025] w=0.9404 to align
# Constraint # added constraint: constraint((T0315)M33.CB, (T0315)L56.CB) [> 3.5493 = 5.9155 < 7.6901] w=0.9402 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)I59.CB) [> 3.6041 = 6.0068 < 7.8088] w=0.9400 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)S174.CB) [> 3.6190 = 6.0316 < 7.8411] w=0.9344 to align
# Constraint # added constraint: constraint((T0315)G150.CA, (T0315)Y172.CB) [> 3.2456 = 5.4094 < 7.0322] w=0.9331 to align
# Constraint # added constraint: constraint((T0315)S174.CB, (T0315)L200.CB) [> 2.9913 = 4.9855 < 6.4812] w=0.9260 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)F34.CB) [> 3.0236 = 5.0393 < 6.5511] w=0.9256 to align
# Constraint # added constraint: constraint((T0315)I125.CB, (T0315)G150.CA) [> 3.5973 = 5.9956 < 7.7942] w=0.9186 to align
# Constraint # added constraint: constraint((T0315)P124.CB, (T0315)G149.CA) [> 3.4680 = 5.7800 < 7.5141] w=0.9179 to align
# Constraint # added constraint: constraint((T0315)G150.CA, (T0315)F171.CB) [> 3.4560 = 5.7599 < 7.4879] w=0.9108 to align
# Constraint # added constraint: constraint((T0315)M33.CB, (T0315)Y57.CB) [> 4.2307 = 7.0512 < 9.1665] w=0.9030 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)Y57.CB) [> 3.5642 = 5.9403 < 7.7224] w=0.9030 to align
# Constraint # added constraint: constraint((T0315)I173.CB, (T0315)R198.CB) [> 3.8415 = 6.4025 < 8.3233] w=0.8969 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)F34.CB) [> 4.0074 = 6.6790 < 8.6827] w=0.8965 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)L56.CB) [> 4.0028 = 6.6713 < 8.6727] w=0.8955 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)V30.CB) [> 4.1698 = 6.9497 < 9.0346] w=0.8890 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)A46.CB) [> 3.5538 = 5.9230 < 7.7000] w=0.8814 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)M33.CB) [> 2.9166 = 4.8611 < 6.3194] w=0.8749 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)V30.CB) [> 3.3016 = 5.5027 < 7.1535] w=0.8749 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)R32.CB) [> 2.6708 = 4.4513 < 5.7867] w=0.8742 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)D31.CB) [> 4.0542 = 6.7569 < 8.7840] w=0.8675 to align
# Constraint # added constraint: constraint((T0315)Y172.CB, (T0315)R198.CB) [> 3.3251 = 5.5419 < 7.2045] w=0.8672 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)Y172.CB) [> 3.4681 = 5.7801 < 7.5142] w=0.8662 to align
# Constraint # added constraint: constraint((T0315)G149.CA, (T0315)Y172.CB) [> 3.8858 = 6.4763 < 8.4192] w=0.8604 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)L123.CB) [> 3.0182 = 5.0304 < 6.5395] w=0.8592 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)M152.CB) [> 3.8461 = 6.4102 < 8.3333] w=0.8583 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)F171.CB) [> 3.9952 = 6.6586 < 8.6562] w=0.8514 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)F34.CB) [> 3.8920 = 6.4867 < 8.4328] w=0.8446 to align
# Constraint # added constraint: constraint((T0315)V87.CB, (T0315)L123.CB) [> 4.0156 = 6.6927 < 8.7006] w=0.8360 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)R32.CB) [> 4.2382 = 7.0637 < 9.1828] w=0.8303 to align
# Constraint # added constraint: constraint((T0315)A82.CB, (T0315)L123.CB) [> 3.7200 = 6.2000 < 8.0600] w=0.8295 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)L200.CB) [> 4.1600 = 6.9333 < 9.0133] w=0.8213 to align
# Constraint # added constraint: constraint((T0315)L75.CB, (T0315)L117.CB) [> 3.2585 = 5.4309 < 7.0601] w=0.8152 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)D31.CB) [> 3.7048 = 6.1747 < 8.0271] w=0.8147 to align
# Constraint # added constraint: constraint((T0315)I90.CB, (T0315)I125.CB) [> 3.4685 = 5.7809 < 7.5152] w=0.8144 to align
# Constraint # added constraint: constraint((T0315)I90.CB, (T0315)I126.CB) [> 4.0982 = 6.8303 < 8.8793] w=0.8140 to align
# Constraint # added constraint: constraint((T0315)I173.CB, (T0315)L199.CB) [> 3.3338 = 5.5564 < 7.2233] w=0.8077 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)P124.CB) [> 3.0793 = 5.1322 < 6.6719] w=0.8071 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)V35.CB) [> 3.3828 = 5.6379 < 7.3293] w=0.8016 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)M33.CB) [> 4.2129 = 7.0214 < 9.1278] w=0.8001 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)F34.CB) [> 3.8335 = 6.3892 < 8.3060] w=0.7941 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)S174.CB) [> 3.7346 = 6.2244 < 8.0917] w=0.7927 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)I88.CB) [> 3.8492 = 6.4153 < 8.3399] w=0.7918 to align
# Constraint # added constraint: constraint((T0315)H8.CB, (T0315)V35.CB) [> 4.0823 = 6.8039 < 8.8450] w=0.7868 to align
# Constraint # added constraint: constraint((T0315)Q114.CB, (T0315)I125.CB) [> 3.6688 = 6.1146 < 7.9489] w=0.7849 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)I173.CB) [> 3.8352 = 6.3919 < 8.3095] w=0.7829 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)V201.CB) [> 3.9111 = 6.5185 < 8.4740] w=0.7790 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)E202.CB) [> 3.1976 = 5.3293 < 6.9280] w=0.7724 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)M33.CB) [> 3.0933 = 5.1556 < 6.7022] w=0.7721 to align
# Constraint # added constraint: constraint((T0315)H8.CB, (T0315)V36.CB) [> 3.6981 = 6.1635 < 8.0125] w=0.7714 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)L199.CB) [> 3.6461 = 6.0768 < 7.8999] w=0.7649 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)V201.CB) [> 3.5215 = 5.8692 < 7.6300] w=0.7644 to align
# Constraint # added constraint: constraint((T0315)G149.CA, (T0315)F171.CB) [> 3.7437 = 6.2396 < 8.1114] w=0.7625 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)G89.CA) [> 3.7599 = 6.2664 < 8.1464] w=0.7620 to align
# Constraint # added constraint: constraint((T0315)A28.CB, (T0315)T224.CB) [> 3.3926 = 5.6544 < 7.3507] w=0.7617 to align
# Constraint # added constraint: constraint((T0315)I22.CB, (T0315)Y53.CB) [> 3.3967 = 5.6611 < 7.3595] w=0.7569 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)H153.CB) [> 3.7938 = 6.3230 < 8.2199] w=0.7563 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)G89.CA) [> 3.3706 = 5.6177 < 7.3030] w=0.7548 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)V87.CB) [> 3.7153 = 6.1922 < 8.0498] w=0.7541 to align
# Constraint # added constraint: constraint((T0315)Y172.CB, (T0315)L199.CB) [> 4.2487 = 7.0812 < 9.2055] w=0.7484 to align
# Constraint # added constraint: constraint((T0315)S174.CB, (T0315)E202.CB) [> 3.1140 = 5.1900 < 6.7470] w=0.7422 to align
# Constraint # added constraint: constraint((T0315)Y172.CB, (T0315)L200.CB) [> 3.6825 = 6.1375 < 7.9788] w=0.7416 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)E202.CB) [> 3.5232 = 5.8720 < 7.6336] w=0.7359 to align
# Constraint # added constraint: constraint((T0315)P124.CB, (T0315)G150.CA) [> 3.6588 = 6.0981 < 7.9275] w=0.7348 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)P124.CB) [> 3.9464 = 6.5773 < 8.5505] w=0.7320 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)A25.CB) [> 3.9810 = 6.6350 < 8.6256] w=0.7266 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)E202.CB) [> 2.3229 = 3.8715 < 5.0329] w=0.7211 to align
# Constraint # added constraint: constraint((T0315)E79.CB, (T0315)L117.CB) [> 3.5713 = 5.9521 < 7.7378] w=0.7202 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)D204.CB) [> 3.2501 = 5.4169 < 7.0420] w=0.7201 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)V36.CB) [> 4.0832 = 6.8053 < 8.8469] w=0.7200 to align
# Constraint # added constraint: constraint((T0315)L18.CB, (T0315)L49.CB) [> 3.5965 = 5.9942 < 7.7924] w=0.7172 to align
# Constraint # added constraint: constraint((T0315)L9.CB, (T0315)V35.CB) [> 3.1855 = 5.3091 < 6.9019] w=0.7129 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)G29.CA) [> 3.3406 = 5.5677 < 7.2380] w=0.7120 to align
# Constraint # added constraint: constraint((T0315)I173.CB, (T0315)L200.CB) [> 4.1958 = 6.9930 < 9.0908] w=0.7113 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)G176.CA) [> 3.8472 = 6.4120 < 8.3357] w=0.7034 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)E202.CB) [> 2.8799 = 4.7998 < 6.2397] w=0.6976 to align
# Constraint # added constraint: constraint((T0315)L75.CB, (T0315)K113.CB) [> 3.2824 = 5.4707 < 7.1119] w=0.6960 to align
# Constraint # added constraint: constraint((T0315)V30.CB, (T0315)V223.CB) [> 3.7426 = 6.2376 < 8.1089] w=0.6957 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)E202.CB) [> 4.0714 = 6.7857 < 8.8215] w=0.6902 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)V87.CB) [> 3.3727 = 5.6211 < 7.3075] w=0.6889 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)I127.CB) [> 3.8813 = 6.4688 < 8.4094] w=0.6875 to align
# Constraint # added constraint: constraint((T0315)I22.CB, (T0315)M33.CB) [> 4.1910 = 6.9849 < 9.0804] w=0.6873 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)L200.CB) [> 3.1074 = 5.1791 < 6.7328] w=0.6832 to align
# Constraint # added constraint: constraint((T0315)S174.CB, (T0315)V201.CB) [> 4.1737 = 6.9561 < 9.0430] w=0.6821 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)M152.CB) [> 3.6575 = 6.0958 < 7.9245] w=0.6801 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)T203.CB) [> 3.5588 = 5.9314 < 7.7108] w=0.6757 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)S174.CB) [> 4.3112 = 7.1853 < 9.3410] w=0.6740 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)I90.CB) [> 3.7197 = 6.1995 < 8.0593] w=0.6730 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)V36.CB) [> 3.8178 = 6.3630 < 8.2719] w=0.6690 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)L117.CB) [> 3.1636 = 5.2727 < 6.8545] w=0.6686 to align
# Constraint # added constraint: constraint((T0315)H8.CB, (T0315)D204.CB) [> 4.2322 = 7.0536 < 9.1697] w=0.6681 to align
# Constraint # added constraint: constraint((T0315)D31.CB, (T0315)F55.CB) [> 3.9781 = 6.6301 < 8.6192] w=0.6680 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)H153.CB) [> 3.5901 = 5.9836 < 7.7786] w=0.6662 to align
# Constraint # added constraint: constraint((T0315)T203.CB, (T0315)R222.CB) [> 3.5641 = 5.9401 < 7.7222] w=0.6619 to align
# Constraint # added constraint: constraint((T0315)I90.CB, (T0315)L123.CB) [> 3.3578 = 5.5964 < 7.2753] w=0.6518 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)F34.CB) [> 4.1277 = 6.8795 < 8.9433] w=0.6515 to align
# Constraint # added constraint: constraint((T0315)V201.CB, (T0315)V226.CB) [> 3.5992 = 5.9987 < 7.7983] w=0.6461 to align
# Constraint # added constraint: constraint((T0315)M93.CB, (T0315)H128.CB) [> 3.2357 = 5.3929 < 7.0108] w=0.6440 to align
# Constraint # added constraint: constraint((T0315)A227.CB, (T0315)V241.CB) [> 3.4365 = 5.7275 < 7.4458] w=0.6391 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)T203.CB) [> 3.7039 = 6.1731 < 8.0251] w=0.6390 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)T203.CB) [> 4.2536 = 7.0894 < 9.2162] w=0.6387 to align
# Constraint # added constraint: constraint((T0315)A82.CB, (T0315)L121.CB) [> 3.1593 = 5.2655 < 6.8451] w=0.6384 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)Q114.CB) [> 3.7702 = 6.2836 < 8.1687] w=0.6372 to align
# Constraint # added constraint: constraint((T0315)E79.CB, (T0315)L121.CB) [> 3.7321 = 6.2202 < 8.0863] w=0.6366 to align
# Constraint # added constraint: constraint((T0315)I125.CB, (T0315)V148.CB) [> 3.5142 = 5.8570 < 7.6140] w=0.6362 to align
# Constraint # added constraint: constraint((T0315)S174.CB, (T0315)L199.CB) [> 4.1425 = 6.9042 < 8.9754] w=0.6361 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)D204.CB) [> 4.1662 = 6.9437 < 9.0268] w=0.6309 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)P187.CB) [> 3.6466 = 6.0776 < 7.9009] w=0.6309 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)T203.CB) [> 4.0337 = 6.7229 < 8.7398] w=0.6306 to align
# Constraint # added constraint: constraint((T0315)K108.CB, (T0315)I139.CB) [> 3.6922 = 6.1536 < 7.9997] w=0.6302 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)V87.CB) [> 3.6438 = 6.0730 < 7.8949] w=0.6288 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)I88.CB) [> 3.4575 = 5.7626 < 7.4913] w=0.6286 to align
# Constraint # added constraint: constraint((T0315)L200.CB, (T0315)A249.CB) [> 3.2269 = 5.3781 < 6.9916] w=0.6243 to align
# Constraint # added constraint: constraint((T0315)L200.CB, (T0315)N248.CB) [> 3.2380 = 5.3966 < 7.0156] w=0.6243 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)E202.CB) [> 4.2094 = 7.0158 < 9.1205] w=0.6241 to align
# Constraint # added constraint: constraint((T0315)T203.CB, (T0315)V223.CB) [> 3.4419 = 5.7364 < 7.4574] w=0.6238 to align
# Constraint # added constraint: constraint((T0315)I230.CB, (T0315)V241.CB) [> 3.6534 = 6.0890 < 7.9157] w=0.6221 to align
# Constraint # added constraint: constraint((T0315)A46.CB, (T0315)G58.CA) [> 4.0128 = 6.6880 < 8.6944] w=0.6220 to align
# Constraint # added constraint: constraint((T0315)A28.CB, (T0315)V223.CB) [> 3.3103 = 5.5171 < 7.1723] w=0.6215 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)A249.CB) [> 2.4962 = 4.1603 < 5.4085] w=0.6168 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)I59.CB) [> 3.0947 = 5.1579 < 6.7053] w=0.6163 to align
# Constraint # added constraint: constraint((T0315)A162.CB, (T0315)I173.CB) [> 3.7064 = 6.1773 < 8.0305] w=0.6153 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)L175.CB) [> 3.9291 = 6.5484 < 8.5130] w=0.6137 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)A249.CB) [> 3.1852 = 5.3086 < 6.9012] w=0.6094 to align
# Constraint # added constraint: constraint((T0315)F171.CB, (T0315)R198.CB) [> 4.1230 = 6.8716 < 8.9331] w=0.6080 to align
# Constraint # added constraint: constraint((T0315)I90.CB, (T0315)P124.CB) [> 4.3917 = 7.3194 < 9.5153] w=0.6071 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)M152.CB) [> 3.2197 = 5.3662 < 6.9760] w=0.6056 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)S174.CB) [> 3.4032 = 5.6720 < 7.3736] w=0.6020 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)S174.CB) [> 3.5323 = 5.8872 < 7.6534] w=0.6014 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)Y57.CB) [> 4.0467 = 6.7445 < 8.7679] w=0.6010 to align
# Constraint # added constraint: constraint((T0315)I90.CB, (T0315)Q114.CB) [> 3.4783 = 5.7971 < 7.5362] w=0.6007 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)S174.CB) [> 3.8249 = 6.3749 < 8.2873] w=0.6006 to align
# Constraint # added constraint: constraint((T0315)V190.CB, (T0315)L199.CB) [> 3.4059 = 5.6766 < 7.3795] w=0.5945 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)Y57.CB) [> 3.0158 = 5.0263 < 6.5342] w=0.5938 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)I90.CB) [> 3.5813 = 5.9688 < 7.7594] w=0.5909 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)H128.CB) [> 3.7110 = 6.1850 < 8.0405] w=0.5909 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)T246.CB) [> 3.7339 = 6.2231 < 8.0900] w=0.5872 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)V223.CB) [> 3.7104 = 6.1839 < 8.0391] w=0.5856 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)S154.CB) [> 3.7624 = 6.2707 < 8.1519] w=0.5847 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)R32.CB) [> 4.3208 = 7.2013 < 9.3617] w=0.5847 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)G91.CA) [> 3.7409 = 6.2348 < 8.1052] w=0.5843 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)I126.CB) [> 2.9766 = 4.9611 < 6.4494] w=0.5841 to align
# Constraint # added constraint: constraint((T0315)A231.CB, (T0315)V241.CB) [> 3.4121 = 5.6869 < 7.3930] w=0.5798 to align
# Constraint # added constraint: constraint((T0315)H8.CB, (T0315)A205.CB) [> 3.6852 = 6.1420 < 7.9845] w=0.5797 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)F55.CB) [> 3.1242 = 5.2071 < 6.7692] w=0.5789 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)I126.CB) [> 3.8778 = 6.4629 < 8.4018] w=0.5769 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)G61.CA) [> 3.4779 = 5.7965 < 7.5355] w=0.5768 to align
# Constraint # added constraint: constraint((T0315)R198.CB, (T0315)N248.CB) [> 4.1020 = 6.8367 < 8.8877] w=0.5722 to align
# Constraint # added constraint: constraint((T0315)I90.CB, (T0315)A118.CB) [> 3.2688 = 5.4480 < 7.0824] w=0.5713 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)I78.CB) [> 3.2013 = 5.3354 < 6.9361] w=0.5708 to align
# Constraint # added constraint: constraint((T0315)L9.CB, (T0315)L18.CB) [> 3.3881 = 5.6468 < 7.3409] w=0.5707 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)G89.CA) [> 3.8923 = 6.4872 < 8.4333] w=0.5696 to align
# Constraint # added constraint: constraint((T0315)G150.CA, (T0315)I173.CB) [> 3.9379 = 6.5632 < 8.5321] w=0.5695 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)G149.CA) [> 3.9365 = 6.5609 < 8.5291] w=0.5684 to align
# Constraint # added constraint: constraint((T0315)L200.CB, (T0315)L252.CB) [> 3.9031 = 6.5051 < 8.4566] w=0.5650 to align
# Constraint # added constraint: constraint((T0315)F111.CB, (T0315)I139.CB) [> 3.3033 = 5.5055 < 7.1571] w=0.5649 to align
# Constraint # added constraint: constraint((T0315)V201.CB, (T0315)T245.CB) [> 3.4069 = 5.6782 < 7.3816] w=0.5649 to align
# Constraint # added constraint: constraint((T0315)L199.CB, (T0315)N248.CB) [> 3.8963 = 6.4938 < 8.4420] w=0.5648 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)C136.CB) [> 3.7440 = 6.2400 < 8.1120] w=0.5578 to align
# Constraint # added constraint: constraint((T0315)R112.CB, (T0315)E143.CB) [> 3.4236 = 5.7059 < 7.4177] w=0.5577 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)T245.CB) [> 4.1422 = 6.9037 < 8.9748] w=0.5575 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)D204.CB) [> 3.4846 = 5.8077 < 7.5500] w=0.5574 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)L56.CB) [> 3.6068 = 6.0114 < 7.8148] w=0.5566 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)G176.CA) [> 3.9222 = 6.5371 < 8.4982] w=0.5557 to align
# Constraint # added constraint: constraint((T0315)I137.CB, (T0315)V165.CB) [> 3.6956 = 6.1593 < 8.0071] w=0.5547 to align
# Constraint # added constraint: constraint((T0315)A162.CB, (T0315)V190.CB) [> 3.5634 = 5.9389 < 7.7206] w=0.5545 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)G91.CA) [> 3.4297 = 5.7162 < 7.4310] w=0.5541 to align
# Constraint # added constraint: constraint((T0315)Y172.CB, (T0315)L252.CB) [> 3.2838 = 5.4729 < 7.1148] w=0.5501 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)T246.CB) [> 3.6305 = 6.0509 < 7.8662] w=0.5500 to align
# Constraint # added constraint: constraint((T0315)T133.CB, (T0315)I161.CB) [> 3.6228 = 6.0381 < 7.8495] w=0.5498 to align
# Constraint # added constraint: constraint((T0315)V201.CB, (T0315)V223.CB) [> 3.8298 = 6.3831 < 8.2980] w=0.5496 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)A205.CB) [> 3.5872 = 5.9787 < 7.7723] w=0.5425 to align
# Constraint # added constraint: constraint((T0315)E92.CB, (T0315)I127.CB) [> 3.5558 = 5.9264 < 7.7043] w=0.5399 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)I90.CB) [> 3.6624 = 6.1040 < 7.9352] w=0.5390 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)E250.CB) [> 3.7882 = 6.3137 < 8.2079] w=0.5351 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)V223.CB) [> 3.4482 = 5.7469 < 7.4710] w=0.5335 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)I90.CB) [> 3.7776 = 6.2960 < 8.1848] w=0.5325 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)I125.CB) [> 3.9194 = 6.5323 < 8.4920] w=0.5321 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)I88.CB) [> 3.1927 = 5.3211 < 6.9175] w=0.5318 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)V201.CB) [> 4.1995 = 6.9991 < 9.0989] w=0.5281 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)I126.CB) [> 4.3269 = 7.2115 < 9.3749] w=0.5278 to align
# Constraint # added constraint: constraint((T0315)I115.CB, (T0315)L140.CB) [> 3.7707 = 6.2846 < 8.1699] w=0.5263 to align
# Constraint # added constraint: constraint((T0315)L199.CB, (T0315)Q244.CB) [> 3.5180 = 5.8633 < 7.6223] w=0.5203 to align
# Constraint # added constraint: constraint((T0315)M33.CB, (T0315)F55.CB) [> 4.0860 = 6.8100 < 8.8530] w=0.5194 to align
# Constraint # added constraint: constraint((T0315)L9.CB, (T0315)V21.CB) [> 3.7123 = 6.1872 < 8.0434] w=0.5187 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)T245.CB) [> 3.0972 = 5.1619 < 6.7105] w=0.5129 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)G176.CA) [> 3.8834 = 6.4724 < 8.4141] w=0.5125 to align
# Constraint # added constraint: constraint((T0315)I43.CB, (T0315)L81.CB) [> 3.5563 = 5.9271 < 7.7052] w=0.5113 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)I151.CB) [> 3.5985 = 5.9975 < 7.7968] w=0.5098 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)M33.CB) [> 4.3450 = 7.2417 < 9.4142] w=0.5093 to align
# Constraint # added constraint: constraint((T0315)A227.CB, (T0315)T245.CB) [> 4.0696 = 6.7827 < 8.8175] w=0.5055 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)F253.CB) [> 4.0809 = 6.8015 < 8.8420] w=0.5055 to align
# Constraint # added constraint: constraint((T0315)H8.CB, (T0315)G37.CA) [> 3.7849 = 6.3082 < 8.2006] w=0.5055 to align
# Constraint # added constraint: constraint((T0315)P124.CB, (T0315)L252.CB) [> 3.7044 = 6.1741 < 8.0263] w=0.5055 to align
# Constraint # added constraint: constraint((T0315)F111.CB, (T0315)C136.CB) [> 3.8691 = 6.4485 < 8.3831] w=0.5047 to align
# Constraint # added constraint: constraint((T0315)G150.CA, (T0315)S174.CB) [> 4.0403 = 6.7338 < 8.7540] w=0.5041 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)I60.CB) [> 3.7701 = 6.2834 < 8.1685] w=0.5027 to align
# Constraint # added constraint: constraint((T0315)I22.CB, (T0315)L56.CB) [> 3.7915 = 6.3191 < 8.2149] w=0.5026 to align
# Constraint # added constraint: constraint((T0315)F111.CB, (T0315)I127.CB) [> 4.1130 = 6.8550 < 8.9115] w=0.5024 to align
# Constraint # added constraint: constraint((T0315)E92.CB, (T0315)H128.CB) [> 3.8009 = 6.3348 < 8.2352] w=0.5019 to align
# Constraint # added constraint: constraint((T0315)Y172.CB, (T0315)N248.CB) [> 4.2273 = 7.0455 < 9.1591] w=0.4980 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)L56.CB) [> 4.4500 = 7.4167 < 9.6417] w=0.4976 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)V201.CB) [> 4.0937 = 6.8228 < 8.8697] w=0.4976 to align
# Constraint # added constraint: constraint((T0315)I125.CB, (T0315)I151.CB) [> 4.2372 = 7.0621 < 9.1807] w=0.4974 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)A118.CB) [> 4.3241 = 7.2068 < 9.3688] w=0.4974 to align
# Constraint # added constraint: constraint((T0315)M93.CB, (T0315)I127.CB) [> 3.9917 = 6.6528 < 8.6486] w=0.4969 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)L175.CB) [> 4.1405 = 6.9008 < 8.9710] w=0.4959 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)V190.CB) [> 3.6351 = 6.0584 < 7.8760] w=0.4955 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)V87.CB) [> 3.8234 = 6.3724 < 8.2841] w=0.4948 to align
# Constraint # added constraint: constraint((T0315)G37.CA, (T0315)H63.CB) [> 3.8542 = 6.4237 < 8.3509] w=0.4913 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)G58.CA) [> 4.2054 = 7.0090 < 9.1116] w=0.4900 to align
# Constraint # added constraint: constraint((T0315)I115.CB, (T0315)A145.CB) [> 3.3487 = 5.5812 < 7.2556] w=0.4890 to align
# Constraint # added constraint: constraint((T0315)I137.CB, (T0315)L169.CB) [> 3.5831 = 5.9718 < 7.7634] w=0.4871 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)I90.CB) [> 3.9483 = 6.5806 < 8.5548] w=0.4871 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)L140.CB) [> 3.5884 = 5.9807 < 7.7749] w=0.4867 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)A28.CB) [> 4.3529 = 7.2549 < 9.4314] w=0.4828 to align
# Constraint # added constraint: constraint((T0315)I173.CB, (T0315)V190.CB) [> 4.0199 = 6.6998 < 8.7098] w=0.4823 to align
# Constraint # added constraint: constraint((T0315)P187.CB, (T0315)I230.CB) [> 3.9383 = 6.5639 < 8.5330] w=0.4821 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)I173.CB) [> 3.3091 = 5.5152 < 7.1698] w=0.4816 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)G58.CA) [> 3.7374 = 6.2290 < 8.0977] w=0.4801 to align
# Constraint # added constraint: constraint((T0315)P159.CB, (T0315)H193.CB) [> 3.4433 = 5.7388 < 7.4605] w=0.4794 to align
# Constraint # added constraint: constraint((T0315)E197.CB, (T0315)N248.CB) [> 3.7359 = 6.2265 < 8.0944] w=0.4758 to align
# Constraint # added constraint: constraint((T0315)H63.CB, (T0315)M93.CB) [> 3.6593 = 6.0988 < 7.9285] w=0.4739 to align
# Constraint # added constraint: constraint((T0315)L9.CB, (T0315)L49.CB) [> 3.8385 = 6.3975 < 8.3167] w=0.4684 to align
# Constraint # added constraint: constraint((T0315)H8.CB, (T0315)P206.CB) [> 3.2661 = 5.4436 < 7.0766] w=0.4683 to align
# Constraint # added constraint: constraint((T0315)F38.CB, (T0315)H63.CB) [> 3.2651 = 5.4418 < 7.0743] w=0.4683 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)I88.CB) [> 4.1032 = 6.8387 < 8.8903] w=0.4680 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)L81.CB) [> 3.2127 = 5.3544 < 6.9608] w=0.4665 to align
# Constraint # added constraint: constraint((T0315)I125.CB, (T0315)A145.CB) [> 4.1545 = 6.9241 < 9.0013] w=0.4657 to align
# Constraint # added constraint: constraint((T0315)M33.CB, (T0315)G58.CA) [> 3.4604 = 5.7674 < 7.4976] w=0.4653 to align
# Constraint # added constraint: constraint((T0315)P124.CB, (T0315)F253.CB) [> 3.7569 = 6.2615 < 8.1399] w=0.4609 to align
# Constraint # added constraint: constraint((T0315)P124.CB, (T0315)I151.CB) [> 3.9556 = 6.5926 < 8.5704] w=0.4602 to align
# Constraint # added constraint: constraint((T0315)G37.CA, (T0315)G61.CA) [> 3.5282 = 5.8804 < 7.6445] w=0.4595 to align
# Constraint # added constraint: constraint((T0315)G29.CA, (T0315)T224.CB) [> 3.8853 = 6.4754 < 8.4181] w=0.4587 to align
# Constraint # added constraint: constraint((T0315)L141.CB, (T0315)L169.CB) [> 3.4437 = 5.7395 < 7.4614] w=0.4569 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)F253.CB) [> 4.1313 = 6.8856 < 8.9512] w=0.4535 to align
# Constraint # added constraint: constraint((T0315)P187.CB, (T0315)L199.CB) [> 3.7278 = 6.2130 < 8.0769] w=0.4533 to align
# Constraint # added constraint: constraint((T0315)G37.CA, (T0315)I59.CB) [> 3.6976 = 6.1627 < 8.0115] w=0.4532 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)G91.CA) [> 3.7816 = 6.3026 < 8.1934] w=0.4508 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)I60.CB) [> 3.6825 = 6.1375 < 7.9788] w=0.4507 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)I126.CB) [> 3.9098 = 6.5164 < 8.4713] w=0.4459 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)T203.CB) [> 3.8309 = 6.3848 < 8.3002] w=0.4448 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)L175.CB) [> 3.6146 = 6.0243 < 7.8316] w=0.4435 to align
# Constraint # added constraint: constraint((T0315)R26.CB, (T0315)F55.CB) [> 3.6297 = 6.0496 < 7.8644] w=0.4430 to align
# Constraint # added constraint: constraint((T0315)L9.CB, (T0315)M33.CB) [> 4.2527 = 7.0879 < 9.2142] w=0.4386 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)A249.CB) [> 4.4699 = 7.4498 < 9.6847] w=0.4386 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)I50.CB) [> 3.5830 = 5.9716 < 7.7631] w=0.4381 to align
# Constraint # added constraint: constraint((T0315)K119.CB, (T0315)E143.CB) [> 4.0973 = 6.8288 < 8.8775] w=0.4379 to align
# Constraint # added constraint: constraint((T0315)A116.CB, (T0315)E143.CB) [> 3.9387 = 6.5645 < 8.5338] w=0.4378 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)K86.CB) [> 3.6635 = 6.1058 < 7.9375] w=0.4370 to align
# Constraint # added constraint: constraint((T0315)G150.CA, (T0315)L252.CB) [> 4.1775 = 6.9625 < 9.0513] w=0.4311 to align
# Constraint # added constraint: constraint((T0315)G94.CA, (T0315)H128.CB) [> 3.6291 = 6.0485 < 7.8631] w=0.4307 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)F171.CB) [> 3.5516 = 5.9194 < 7.6952] w=0.4304 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)G177.CA) [> 3.8656 = 6.4427 < 8.3756] w=0.4297 to align
# Constraint # added constraint: constraint((T0315)M1.CB, (T0315)D31.CB) [> 2.0760 = 3.4601 < 4.4981] w=0.4295 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)L200.CB) [> 4.3116 = 7.1859 < 9.3417] w=0.4290 to align
# Constraint # added constraint: constraint((T0315)I43.CB, (T0315)I60.CB) [> 3.4452 = 5.7421 < 7.4647] w=0.4289 to align
# Constraint # added constraint: constraint((T0315)I22.CB, (T0315)L49.CB) [> 3.3584 = 5.5973 < 7.2765] w=0.4260 to align
# Constraint # added constraint: constraint((T0315)E92.CB, (T0315)I125.CB) [> 4.1284 = 6.8806 < 8.9448] w=0.4216 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)I78.CB) [> 3.7783 = 6.2972 < 8.1864] w=0.4206 to align
# Constraint # added constraint: constraint((T0315)A82.CB, (T0315)L117.CB) [> 3.6699 = 6.1166 < 7.9515] w=0.4175 to align
# Constraint # added constraint: constraint((T0315)R24.CB, (T0315)P220.CB) [> 3.7260 = 6.2099 < 8.0729] w=0.4162 to align
# Constraint # added constraint: constraint((T0315)A191.CB, (T0315)L236.CB) [> 4.1057 = 6.8429 < 8.8958] w=0.4161 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)D204.CB) [> 3.8356 = 6.3927 < 8.3105] w=0.4154 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)E202.CB) [> 3.9106 = 6.5176 < 8.4729] w=0.4151 to align
# Constraint # added constraint: constraint((T0315)I115.CB, (T0315)H144.CB) [> 3.5144 = 5.8573 < 7.6145] w=0.4149 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)I88.CB) [> 3.5857 = 5.9761 < 7.7690] w=0.4144 to align
# Constraint # added constraint: constraint((T0315)Q134.CB, (T0315)I161.CB) [> 4.0245 = 6.7075 < 8.7197] w=0.4131 to align
# Constraint # added constraint: constraint((T0315)P124.CB, (T0315)V148.CB) [> 3.5193 = 5.8655 < 7.6252] w=0.4086 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)Y172.CB) [> 4.0767 = 6.7944 < 8.8328] w=0.4081 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)K86.CB) [> 3.5449 = 5.9082 < 7.6806] w=0.4078 to align
# Constraint # added constraint: constraint((T0315)E92.CB, (T0315)F111.CB) [> 3.8401 = 6.4002 < 8.3203] w=0.4071 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)G176.CA) [> 3.7580 = 6.2634 < 8.1424] w=0.4070 to align
# Constraint # added constraint: constraint((T0315)H63.CB, (T0315)G91.CA) [> 3.5914 = 5.9857 < 7.7814] w=0.4059 to align
# Constraint # added constraint: constraint((T0315)S19.CB, (T0315)L49.CB) [> 3.5770 = 5.9617 < 7.7502] w=0.4059 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)F253.CB) [> 3.6302 = 6.0504 < 7.8656] w=0.4014 to align
# Constraint # added constraint: constraint((T0315)F38.CB, (T0315)W62.CB) [> 3.7148 = 6.1913 < 8.0487] w=0.4014 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)I78.CB) [> 3.6895 = 6.1491 < 7.9939] w=0.4006 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)G89.CA) [> 3.2099 = 5.3498 < 6.9547] w=0.4003 to align
# Constraint # added constraint: constraint((T0315)M47.CB, (T0315)K86.CB) [> 3.5976 = 5.9960 < 7.7948] w=0.3993 to align
# Constraint # added constraint: constraint((T0315)F111.CB, (T0315)L140.CB) [> 3.8797 = 6.4661 < 8.4059] w=0.3986 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)I59.CB) [> 3.7068 = 6.1779 < 8.0313] w=0.3986 to align
# Constraint # added constraint: constraint((T0315)A25.CB, (T0315)V223.CB) [> 4.2835 = 7.1392 < 9.2810] w=0.3985 to align
# Constraint # added constraint: constraint((T0315)K40.CB, (T0315)W77.CB) [> 3.4816 = 5.8027 < 7.5436] w=0.3984 to align
# Constraint # added constraint: constraint((T0315)V201.CB, (T0315)A227.CB) [> 3.7748 = 6.2914 < 8.1788] w=0.3938 to align
# Constraint # added constraint: constraint((T0315)N170.CB, (T0315)R198.CB) [> 4.3143 = 7.1905 < 9.3476] w=0.3938 to align
# Constraint # added constraint: constraint((T0315)L140.CB, (T0315)F171.CB) [> 3.8709 = 6.4515 < 8.3869] w=0.3935 to align
# Constraint # added constraint: constraint((T0315)T166.CB, (T0315)R198.CB) [> 3.4861 = 5.8101 < 7.5531] w=0.3930 to align
# Constraint # added constraint: constraint((T0315)A205.CB, (T0315)R222.CB) [> 4.0788 = 6.7980 < 8.8374] w=0.3924 to align
# Constraint # added constraint: constraint((T0315)V201.CB, (T0315)I230.CB) [> 3.9356 = 6.5593 < 8.5271] w=0.3922 to align
# Constraint # added constraint: constraint((T0315)K188.CB, (T0315)L233.CB) [> 3.6100 = 6.0166 < 7.8216] w=0.3909 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)L200.CB) [> 3.6834 = 6.1391 < 7.9808] w=0.3864 to align
# Constraint # added constraint: constraint((T0315)L140.CB, (T0315)G150.CA) [> 4.1001 = 6.8335 < 8.8835] w=0.3862 to align
# Constraint # added constraint: constraint((T0315)T203.CB, (T0315)V226.CB) [> 3.6912 = 6.1520 < 7.9976] w=0.3860 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)G61.CA) [> 3.7535 = 6.2559 < 8.1327] w=0.3837 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)G61.CA) [> 3.9827 = 6.6379 < 8.6293] w=0.3837 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)D204.CB) [> 3.9304 = 6.5507 < 8.5159] w=0.3791 to align
# Constraint # added constraint: constraint((T0315)M196.CB, (T0315)Q244.CB) [> 3.6287 = 6.0478 < 7.8622] w=0.3791 to align
# Constraint # added constraint: constraint((T0315)H8.CB, (T0315)Y207.CB) [> 4.2371 = 7.0619 < 9.1804] w=0.3791 to align
# Constraint # added constraint: constraint((T0315)L9.CB, (T0315)A46.CB) [> 3.7144 = 6.1907 < 8.0479] w=0.3791 to align
# Constraint # added constraint: constraint((T0315)G37.CA, (T0315)I60.CB) [> 3.9427 = 6.5712 < 8.5426] w=0.3790 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)I60.CB) [> 3.9411 = 6.5684 < 8.5390] w=0.3783 to align
# Constraint # added constraint: constraint((T0315)T166.CB, (T0315)S195.CB) [> 3.6794 = 6.1323 < 7.9720] w=0.3783 to align
# Constraint # added constraint: constraint((T0315)H74.CB, (T0315)V110.CB) [> 3.9074 = 6.5123 < 8.4660] w=0.3765 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)G91.CA) [> 3.5231 = 5.8718 < 7.6333] w=0.3765 to align
# Constraint # added constraint: constraint((T0315)D31.CB, (T0315)L56.CB) [> 3.8741 = 6.4568 < 8.3939] w=0.3762 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)F253.CB) [> 3.9386 = 6.5643 < 8.5336] w=0.3717 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)L252.CB) [> 3.9280 = 6.5467 < 8.5106] w=0.3717 to align
# Constraint # added constraint: constraint((T0315)I137.CB, (T0315)F171.CB) [> 3.7696 = 6.2827 < 8.1675] w=0.3715 to align
# Constraint # added constraint: constraint((T0315)I43.CB, (T0315)V87.CB) [> 4.0961 = 6.8269 < 8.8750] w=0.3702 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)A82.CB) [> 3.5494 = 5.9157 < 7.6904] w=0.3699 to align
# Constraint # added constraint: constraint((T0315)A191.CB, (T0315)I230.CB) [> 3.8311 = 6.3852 < 8.3007] w=0.3685 to align
# Constraint # added constraint: constraint((T0315)F38.CB, (T0315)G61.CA) [> 3.5476 = 5.9126 < 7.6864] w=0.3641 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)S154.CB) [> 4.0913 = 6.8189 < 8.8646] w=0.3628 to align
# Constraint # added constraint: constraint((T0315)G157.CA, (T0315)Q186.CB) [> 3.9819 = 6.6365 < 8.6274] w=0.3621 to align
# Constraint # added constraint: constraint((T0315)E92.CB, (T0315)I126.CB) [> 4.1602 = 6.9337 < 9.0138] w=0.3620 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)L121.CB) [> 3.9663 = 6.6106 < 8.5938] w=0.3619 to align
# Constraint # added constraint: constraint((T0315)V148.CB, (T0315)Y172.CB) [> 4.2269 = 7.0448 < 9.1582] w=0.3565 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)V201.CB) [> 4.1100 = 6.8500 < 8.9050] w=0.3553 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)G176.CA) [> 3.8328 = 6.3880 < 8.3044] w=0.3552 to align
# Constraint # added constraint: constraint((T0315)M1.CB, (T0315)V30.CB) [> 4.2324 = 7.0541 < 9.1703] w=0.3552 to align
# Constraint # added constraint: constraint((T0315)T166.CB, (T0315)V194.CB) [> 3.3849 = 5.6415 < 7.3340] w=0.3549 to align
# Constraint # added constraint: constraint((T0315)H63.CB, (T0315)E92.CB) [> 3.6455 = 6.0759 < 7.8987] w=0.3542 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)L252.CB) [> 3.9105 = 6.5176 < 8.4728] w=0.3494 to align
# Constraint # added constraint: constraint((T0315)V148.CB, (T0315)N170.CB) [> 3.3670 = 5.6116 < 7.2951] w=0.3493 to align
# Constraint # added constraint: constraint((T0315)E147.CB, (T0315)N170.CB) [> 3.2816 = 5.4693 < 7.1101] w=0.3493 to align
# Constraint # added constraint: constraint((T0315)G37.CA, (T0315)W62.CB) [> 3.8152 = 6.3586 < 8.2662] w=0.3493 to align
# Constraint # added constraint: constraint((T0315)A118.CB, (T0315)V148.CB) [> 3.6303 = 6.0505 < 7.8656] w=0.3480 to align
# Constraint # added constraint: constraint((T0315)H63.CB, (T0315)H128.CB) [> 4.0986 = 6.8311 < 8.8804] w=0.3473 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)A191.CB) [> 3.9649 = 6.6082 < 8.5906] w=0.3472 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)Q114.CB) [> 4.0115 = 6.6858 < 8.6915] w=0.3470 to align
# Constraint # added constraint: constraint((T0315)L18.CB, (T0315)R45.CB) [> 4.0528 = 6.7546 < 8.7810] w=0.3465 to align
# Constraint # added constraint: constraint((T0315)G37.CA, (T0315)A46.CB) [> 3.5238 = 5.8730 < 7.6349] w=0.3419 to align
# Constraint # added constraint: constraint((T0315)A25.CB, (T0315)P220.CB) [> 3.0819 = 5.1364 < 6.6773] w=0.3419 to align
# Constraint # added constraint: constraint((T0315)A67.CB, (T0315)V110.CB) [> 3.3287 = 5.5478 < 7.2121] w=0.3418 to align
# Constraint # added constraint: constraint((T0315)G94.CA, (T0315)I127.CB) [> 3.7301 = 6.2168 < 8.0818] w=0.3417 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)W62.CB) [> 3.8867 = 6.4778 < 8.4212] w=0.3417 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)P178.CB) [> 3.9189 = 6.5315 < 8.4910] w=0.3415 to align
# Constraint # added constraint: constraint((T0315)R26.CB, (T0315)D54.CB) [> 4.0899 = 6.8165 < 8.8614] w=0.3415 to align
# Constraint # added constraint: constraint((T0315)T133.CB, (T0315)V165.CB) [> 3.6534 = 6.0889 < 7.9156] w=0.3409 to align
# Constraint # added constraint: constraint((T0315)M1.CB, (T0315)R32.CB) [> 3.6772 = 6.1287 < 7.9673] w=0.3404 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)E92.CB) [> 3.4757 = 5.7929 < 7.5308] w=0.3397 to align
# Constraint # added constraint: constraint((T0315)A162.CB, (T0315)V194.CB) [> 3.3657 = 5.6094 < 7.2923] w=0.3395 to align
# Constraint # added constraint: constraint((T0315)M47.CB, (T0315)P85.CB) [> 3.7464 = 6.2440 < 8.1172] w=0.3392 to align
# Constraint # added constraint: constraint((T0315)A162.CB, (T0315)H193.CB) [> 3.3218 = 5.5363 < 7.1972] w=0.3383 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)I151.CB) [> 4.0528 = 6.7547 < 8.7811] w=0.3345 to align
# Constraint # added constraint: constraint((T0315)G149.CA, (T0315)L252.CB) [> 4.2078 = 7.0131 < 9.1170] w=0.3345 to align
# Constraint # added constraint: constraint((T0315)M196.CB, (T0315)E240.CB) [> 3.3669 = 5.6115 < 7.2950] w=0.3345 to align
# Constraint # added constraint: constraint((T0315)A205.CB, (T0315)P220.CB) [> 3.4230 = 5.7049 < 7.4164] w=0.3345 to align
# Constraint # added constraint: constraint((T0315)I43.CB, (T0315)W77.CB) [> 3.7336 = 6.2227 < 8.0895] w=0.3345 to align
# Constraint # added constraint: constraint((T0315)I173.CB, (T0315)V194.CB) [> 3.7298 = 6.2163 < 8.0812] w=0.3341 to align
# Constraint # added constraint: constraint((T0315)M47.CB, (T0315)L81.CB) [> 3.7301 = 6.2169 < 8.0819] w=0.3340 to align
# Constraint # added constraint: constraint((T0315)V148.CB, (T0315)F171.CB) [> 4.1123 = 6.8538 < 8.9100] w=0.3337 to align
# Constraint # added constraint: constraint((T0315)I22.CB, (T0315)I50.CB) [> 3.7125 = 6.1874 < 8.0436] w=0.3321 to align
# Constraint # added constraint: constraint((T0315)A25.CB, (T0315)L56.CB) [> 3.8817 = 6.4694 < 8.4103] w=0.3316 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)I126.CB) [> 4.4843 = 7.4738 < 9.7159] w=0.3271 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)I126.CB) [> 4.3570 = 7.2618 < 9.4403] w=0.3271 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)V87.CB) [> 3.5257 = 5.8762 < 7.6390] w=0.3270 to align
# Constraint # added constraint: constraint((T0315)L95.CB, (T0315)N129.CB) [> 3.8299 = 6.3831 < 8.2980] w=0.3265 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)G89.CA) [> 3.7680 = 6.2800 < 8.1640] w=0.3254 to align
# Constraint # added constraint: constraint((T0315)D31.CB, (T0315)Y57.CB) [> 4.0003 = 6.6672 < 8.6673] w=0.3243 to align
# Constraint # added constraint: constraint((T0315)A191.CB, (T0315)L233.CB) [> 3.5115 = 5.8525 < 7.6082] w=0.3241 to align
# Constraint # added constraint: constraint((T0315)T203.CB, (T0315)A221.CB) [> 3.3818 = 5.6363 < 7.3271] w=0.3203 to align
# Constraint # added constraint: constraint((T0315)V201.CB, (T0315)A249.CB) [> 4.3156 = 7.1927 < 9.3505] w=0.3196 to align
# Constraint # added constraint: constraint((T0315)A46.CB, (T0315)L56.CB) [> 3.4676 = 5.7793 < 7.5132] w=0.3190 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)V87.CB) [> 3.5354 = 5.8923 < 7.6600] w=0.3187 to align
# Constraint # added constraint: constraint((T0315)V21.CB, (T0315)M33.CB) [> 4.0781 = 6.7969 < 8.8359] w=0.3181 to align
# Constraint # added constraint: constraint((T0315)P64.CB, (T0315)M93.CB) [> 4.2452 = 7.0754 < 9.1980] w=0.3181 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)I173.CB) [> 4.1020 = 6.8367 < 8.8877] w=0.3170 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)I151.CB) [> 4.0928 = 6.8213 < 8.8677] w=0.3167 to align
# Constraint # added constraint: constraint((T0315)R24.CB, (T0315)A221.CB) [> 2.9000 = 4.8333 < 6.2833] w=0.3122 to align
# Constraint # added constraint: constraint((T0315)N10.CB, (T0315)G37.CA) [> 4.2079 = 7.0131 < 9.1171] w=0.3122 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)M93.CB) [> 4.0571 = 6.7619 < 8.7905] w=0.3121 to align
# Constraint # added constraint: constraint((T0315)Q83.CB, (T0315)L121.CB) [> 4.1447 = 6.9079 < 8.9802] w=0.3114 to align
# Constraint # added constraint: constraint((T0315)E92.CB, (T0315)Q114.CB) [> 3.3543 = 5.5905 < 7.2676] w=0.3108 to align
# Constraint # added constraint: constraint((T0315)L18.CB, (T0315)V35.CB) [> 4.2821 = 7.1368 < 9.2778] w=0.3106 to align
# Constraint # added constraint: constraint((T0315)I125.CB, (T0315)E147.CB) [> 3.5692 = 5.9486 < 7.7332] w=0.3102 to align
# Constraint # added constraint: constraint((T0315)P159.CB, (T0315)V190.CB) [> 3.5216 = 5.8693 < 7.6301] w=0.3094 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)G149.CA) [> 4.2996 = 7.1660 < 9.3158] w=0.3083 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)L255.CB) [> 4.1110 = 6.8517 < 8.9073] w=0.3048 to align
# Constraint # added constraint: constraint((T0315)P206.CB, (T0315)E219.CB) [> 3.9255 = 6.5425 < 8.5053] w=0.3047 to align
# Constraint # added constraint: constraint((T0315)G94.CA, (T0315)N129.CB) [> 3.8373 = 6.3954 < 8.3141] w=0.3045 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)G89.CA) [> 3.9388 = 6.5647 < 8.5342] w=0.3039 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)Q114.CB) [> 4.2795 = 7.1325 < 9.2723] w=0.3037 to align
# Constraint # added constraint: constraint((T0315)L140.CB, (T0315)L169.CB) [> 3.8410 = 6.4016 < 8.3222] w=0.3035 to align
# Constraint # added constraint: constraint((T0315)D96.CB, (T0315)H128.CB) [> 3.8361 = 6.3934 < 8.3115] w=0.3034 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)V201.CB) [> 3.9282 = 6.5470 < 8.5111] w=0.3033 to align
# Constraint # added constraint: constraint((T0315)D96.CB, (T0315)N129.CB) [> 4.1898 = 6.9831 < 9.0780] w=0.3032 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)E92.CB) [> 3.8758 = 6.4596 < 8.3975] w=0.3023 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)H153.CB) [> 3.5237 = 5.8728 < 7.6346] w=0.2974 to align
# Constraint # added constraint: constraint((T0315)E146.CB, (T0315)N170.CB) [> 3.7490 = 6.2483 < 8.1228] w=0.2973 to align
# Constraint # added constraint: constraint((T0315)L9.CB, (T0315)V36.CB) [> 4.3012 = 7.1687 < 9.3193] w=0.2973 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)T203.CB) [> 3.7359 = 6.2265 < 8.0945] w=0.2972 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)M93.CB) [> 3.5730 = 5.9549 < 7.7414] w=0.2968 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)L200.CB) [> 3.8263 = 6.3771 < 8.2903] w=0.2959 to align
# Constraint # added constraint: constraint((T0315)A25.CB, (T0315)A221.CB) [> 3.2044 = 5.3407 < 6.9429] w=0.2899 to align
# Constraint # added constraint: constraint((T0315)L9.CB, (T0315)L56.CB) [> 4.3766 = 7.2944 < 9.4827] w=0.2899 to align
# Constraint # added constraint: constraint((T0315)I90.CB, (T0315)L117.CB) [> 3.7294 = 6.2156 < 8.0803] w=0.2825 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)A46.CB) [> 4.0507 = 6.7511 < 8.7765] w=0.2824 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)L200.CB) [> 4.4463 = 7.4105 < 9.6337] w=0.2823 to align
# Constraint # added constraint: constraint((T0315)K188.CB, (T0315)K234.CB) [> 3.6458 = 6.0763 < 7.8991] w=0.2823 to align
# Constraint # added constraint: constraint((T0315)L95.CB, (T0315)H128.CB) [> 4.1257 = 6.8761 < 8.9389] w=0.2822 to align
# Constraint # added constraint: constraint((T0315)I22.CB, (T0315)E52.CB) [> 4.1313 = 6.8855 < 8.9511] w=0.2819 to align
# Constraint # added constraint: constraint((T0315)H8.CB, (T0315)F38.CB) [> 4.1081 = 6.8468 < 8.9008] w=0.2810 to align
# Constraint # added constraint: constraint((T0315)A184.CB, (T0315)V226.CB) [> 3.6361 = 6.0602 < 7.8783] w=0.2810 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)P206.CB) [> 4.1132 = 6.8553 < 8.9119] w=0.2809 to align
# Constraint # added constraint: constraint((T0315)V65.CB, (T0315)W99.CB) [> 3.6284 = 6.0472 < 7.8614] w=0.2808 to align
# Constraint # added constraint: constraint((T0315)V87.CB, (T0315)P124.CB) [> 3.3268 = 5.5446 < 7.2080] w=0.2807 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)V148.CB) [> 3.2973 = 5.4955 < 7.1441] w=0.2802 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)E202.CB) [> 3.7009 = 6.1681 < 8.0186] w=0.2751 to align
# Constraint # added constraint: constraint((T0315)I3.CB, (T0315)L255.CB) [> 4.4034 = 7.3389 < 9.5406] w=0.2751 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)M152.CB) [> 3.5043 = 5.8404 < 7.5926] w=0.2750 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)Q114.CB) [> 3.8766 = 6.4611 < 8.3994] w=0.2749 to align
# Constraint # added constraint: constraint((T0315)L56.CB, (T0315)K86.CB) [> 4.0198 = 6.6998 < 8.7097] w=0.2740 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)L175.CB) [> 3.9138 = 6.5230 < 8.4799] w=0.2712 to align
# Constraint # added constraint: constraint((T0315)T133.CB, (T0315)I164.CB) [> 3.7731 = 6.2884 < 8.1749] w=0.2677 to align
# Constraint # added constraint: constraint((T0315)Y207.CB, (T0315)N218.CB) [> 3.5874 = 5.9789 < 7.7726] w=0.2676 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)G177.CA) [> 3.8811 = 6.4685 < 8.4091] w=0.2675 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)I88.CB) [> 3.6714 = 6.1189 < 7.9546] w=0.2672 to align
# Constraint # added constraint: constraint((T0315)I50.CB, (T0315)K86.CB) [> 3.3894 = 5.6490 < 7.3437] w=0.2670 to align
# Constraint # added constraint: constraint((T0315)V179.CB, (T0315)V226.CB) [> 4.1930 = 6.9884 < 9.0849] w=0.2670 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)H153.CB) [> 3.8208 = 6.3679 < 8.2783] w=0.2669 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)F155.CB) [> 3.8128 = 6.3547 < 8.2611] w=0.2660 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)V226.CB) [> 3.4313 = 5.7188 < 7.4344] w=0.2602 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)A249.CB) [> 4.6744 = 7.7907 < 10.1279] w=0.2602 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)A25.CB) [> 4.5558 = 7.5929 < 9.8708] w=0.2602 to align
# Constraint # added constraint: constraint((T0315)D11.CB, (T0315)P206.CB) [> 3.5489 = 5.9149 < 7.6893] w=0.2601 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)H63.CB) [> 3.1886 = 5.3143 < 6.9086] w=0.2601 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)P187.CB) [> 3.9670 = 6.6117 < 8.5951] w=0.2599 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)G89.CA) [> 4.4992 = 7.4986 < 9.7482] w=0.2599 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)A205.CB) [> 4.1597 = 6.9329 < 9.0128] w=0.2587 to align
# Constraint # added constraint: constraint((T0315)P64.CB, (T0315)H74.CB) [> 3.3632 = 5.6054 < 7.2870] w=0.2580 to align
# Constraint # added constraint: constraint((T0315)F70.CB, (T0315)V110.CB) [> 3.5839 = 5.9731 < 7.7651] w=0.2533 to align
# Constraint # added constraint: constraint((T0315)C136.CB, (T0315)M152.CB) [> 4.0502 = 6.7503 < 8.7754] w=0.2527 to align
# Constraint # added constraint: constraint((T0315)H63.CB, (T0315)G94.CA) [> 4.1147 = 6.8579 < 8.9152] w=0.2527 to align
# Constraint # added constraint: constraint((T0315)F38.CB, (T0315)I60.CB) [> 4.1224 = 6.8707 < 8.9319] w=0.2527 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)G91.CA) [> 3.9156 = 6.5260 < 8.4837] w=0.2526 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)E202.CB) [> 4.0584 = 6.7641 < 8.7933] w=0.2525 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)V190.CB) [> 4.0664 = 6.7773 < 8.8105] w=0.2519 to align
# Constraint # added constraint: constraint((T0315)D163.CB, (T0315)V194.CB) [> 3.7952 = 6.3253 < 8.2228] w=0.2508 to align
# Constraint # added constraint: constraint((T0315)T71.CB, (T0315)V110.CB) [> 3.3770 = 5.6284 < 7.3169] w=0.2498 to align
# Constraint # added constraint: constraint((T0315)K192.CB, (T0315)L233.CB) [> 3.7032 = 6.1719 < 8.0235] w=0.2497 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)V165.CB) [> 3.4518 = 5.7531 < 7.4790] w=0.2452 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)Q114.CB) [> 4.3806 = 7.3011 < 9.4914] w=0.2445 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)V165.CB) [> 4.1050 = 6.8417 < 8.8942] w=0.2438 to align
# Constraint # added constraint: constraint((T0315)P64.CB, (T0315)E92.CB) [> 4.0124 = 6.6873 < 8.6936] w=0.2437 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)I125.CB) [> 3.4810 = 5.8016 < 7.5421] w=0.2435 to align
# Constraint # added constraint: constraint((T0315)G157.CA, (T0315)V190.CB) [> 4.1877 = 6.9794 < 9.0733] w=0.2423 to align
# Constraint # added constraint: constraint((T0315)A227.CB, (T0315)C242.CB) [> 4.0660 = 6.7767 < 8.8097] w=0.2379 to align
# Constraint # added constraint: constraint((T0315)I68.CB, (T0315)V106.CB) [> 3.4042 = 5.6737 < 7.3758] w=0.2378 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)H153.CB) [> 3.5952 = 5.9920 < 7.7896] w=0.2372 to align
# Constraint # added constraint: constraint((T0315)A184.CB, (T0315)Q229.CB) [> 3.4742 = 5.7903 < 7.5274] w=0.2363 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)V165.CB) [> 3.7093 = 6.1822 < 8.0369] w=0.2362 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)G89.CA) [> 3.8568 = 6.4279 < 8.3563] w=0.2362 to align
# Constraint # added constraint: constraint((T0315)E131.CB, (T0315)S156.CB) [> 4.1960 = 6.9933 < 9.0913] w=0.2362 to align
# Constraint # added constraint: constraint((T0315)L95.CB, (T0315)R130.CB) [> 3.8412 = 6.4020 < 8.3226] w=0.2300 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)P178.CB) [> 4.1005 = 6.8342 < 8.8845] w=0.2295 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)S174.CB) [> 3.9652 = 6.6087 < 8.5913] w=0.2289 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)A227.CB) [> 3.7192 = 6.1987 < 8.0583] w=0.2289 to align
# Constraint # added constraint: constraint((T0315)H63.CB, (T0315)H98.CB) [> 3.7750 = 6.2917 < 8.1792] w=0.2288 to align
# Constraint # added constraint: constraint((T0315)A191.CB, (T0315)K234.CB) [> 4.0733 = 6.7889 < 8.8256] w=0.2280 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)I230.CB) [> 3.7801 = 6.3002 < 8.1903] w=0.2231 to align
# Constraint # added constraint: constraint((T0315)V65.CB, (T0315)M93.CB) [> 4.0417 = 6.7362 < 8.7571] w=0.2229 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)D204.CB) [> 3.4797 = 5.7995 < 7.5394] w=0.2229 to align
# Constraint # added constraint: constraint((T0315)L95.CB, (T0315)A132.CB) [> 3.0196 = 5.0327 < 6.5425] w=0.2229 to align
# Constraint # added constraint: constraint((T0315)C136.CB, (T0315)I151.CB) [> 4.0471 = 6.7452 < 8.7688] w=0.2228 to align
# Constraint # added constraint: constraint((T0315)A162.CB, (T0315)L175.CB) [> 3.9196 = 6.5327 < 8.4925] w=0.2221 to align
# Constraint # added constraint: constraint((T0315)K40.CB, (T0315)L81.CB) [> 3.5852 = 5.9754 < 7.7680] w=0.2212 to align
# Constraint # added constraint: constraint((T0315)Y97.CB, (T0315)R130.CB) [> 3.9349 = 6.5581 < 8.5256] w=0.2198 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)V201.CB) [> 3.9589 = 6.5981 < 8.5775] w=0.2155 to align
# Constraint # added constraint: constraint((T0315)L95.CB, (T0315)C136.CB) [> 3.5126 = 5.8543 < 7.6106] w=0.2154 to align
# Constraint # added constraint: constraint((T0315)I43.CB, (T0315)H84.CB) [> 3.6407 = 6.0679 < 7.8883] w=0.2141 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)I126.CB) [> 3.9515 = 6.5858 < 8.5616] w=0.2137 to align
# Constraint # added constraint: constraint((T0315)D96.CB, (T0315)A132.CB) [> 3.6333 = 6.0555 < 7.8722] w=0.2136 to align
# Constraint # added constraint: constraint((T0315)L75.CB, (T0315)R120.CB) [> 4.3622 = 7.2703 < 9.4514] w=0.2130 to align
# Constraint # added constraint: constraint((T0315)H98.CB, (T0315)R130.CB) [> 3.5626 = 5.9376 < 7.7189] w=0.2118 to align
# Constraint # added constraint: constraint((T0315)L9.CB, (T0315)A205.CB) [> 4.3643 = 7.2739 < 9.4560] w=0.2082 to align
# Constraint # added constraint: constraint((T0315)P206.CB, (T0315)R217.CB) [> 3.3866 = 5.6444 < 7.3377] w=0.2082 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)I151.CB) [> 4.5816 = 7.6360 < 9.9268] w=0.2081 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)V226.CB) [> 3.6131 = 6.0218 < 7.8283] w=0.2080 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)V190.CB) [> 3.9937 = 6.6562 < 8.6531] w=0.2068 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)S156.CB) [> 4.0439 = 6.7398 < 8.7617] w=0.2059 to align
# Constraint # added constraint: constraint((T0315)P64.CB, (T0315)V110.CB) [> 3.8842 = 6.4736 < 8.4157] w=0.2007 to align
# Constraint # added constraint: constraint((T0315)P64.CB, (T0315)G94.CA) [> 2.9948 = 4.9913 < 6.4886] w=0.2006 to align
# Constraint # added constraint: constraint((T0315)M93.CB, (T0315)Q114.CB) [> 2.9504 = 4.9172 < 6.3924] w=0.2004 to align
# Constraint # added constraint: constraint((T0315)G94.CA, (T0315)F111.CB) [> 3.6196 = 6.0327 < 7.8426] w=0.2001 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)I88.CB) [> 3.6989 = 6.1648 < 8.0142] w=0.2000 to align
# Constraint # added constraint: constraint((T0315)H98.CB, (T0315)H128.CB) [> 3.3063 = 5.5105 < 7.1637] w=0.2000 to align
# Constraint # added constraint: constraint((T0315)D96.CB, (T0315)Q107.CB) [> 3.8492 = 6.4153 < 8.3399] w=0.1992 to align
# Constraint # added constraint: constraint((T0315)M93.CB, (T0315)N129.CB) [> 3.9969 = 6.6614 < 8.6598] w=0.1988 to align
# Constraint # added constraint: constraint((T0315)A205.CB, (T0315)R217.CB) [> 4.1807 = 6.9679 < 9.0583] w=0.1933 to align
# Constraint # added constraint: constraint((T0315)M33.CB, (T0315)P220.CB) [> 3.8545 = 6.4242 < 8.3514] w=0.1933 to align
# Constraint # added constraint: constraint((T0315)I230.CB, (T0315)Q244.CB) [> 4.2210 = 7.0349 < 9.1454] w=0.1933 to align
# Constraint # added constraint: constraint((T0315)M93.CB, (T0315)I126.CB) [> 4.0934 = 6.8224 < 8.8691] w=0.1933 to align
# Constraint # added constraint: constraint((T0315)M93.CB, (T0315)I125.CB) [> 3.4931 = 5.8219 < 7.5684] w=0.1933 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)R222.CB) [> 3.7295 = 6.2159 < 8.0807] w=0.1933 to align
# Constraint # added constraint: constraint((T0315)Y97.CB, (T0315)A132.CB) [> 3.0411 = 5.0685 < 6.5891] w=0.1932 to align
# Constraint # added constraint: constraint((T0315)D163.CB, (T0315)V190.CB) [> 4.0547 = 6.7578 < 8.7851] w=0.1932 to align
# Constraint # added constraint: constraint((T0315)V179.CB, (T0315)T203.CB) [> 3.1362 = 5.2270 < 6.7951] w=0.1928 to align
# Constraint # added constraint: constraint((T0315)G94.CA, (T0315)Q107.CB) [> 3.8857 = 6.4761 < 8.4190] w=0.1928 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)G177.CA) [> 3.7747 = 6.2911 < 8.1785] w=0.1926 to align
# Constraint # added constraint: constraint((T0315)H98.CB, (T0315)Q107.CB) [> 3.6080 = 6.0133 < 7.8173] w=0.1920 to align
# Constraint # added constraint: constraint((T0315)S174.CB, (T0315)R198.CB) [> 3.2851 = 5.4751 < 7.1177] w=0.1916 to align
# Constraint # added constraint: constraint((T0315)Y97.CB, (T0315)Q107.CB) [> 3.9493 = 6.5821 < 8.5568] w=0.1905 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)I173.CB) [> 3.0108 = 5.0179 < 6.5233] w=0.1859 to align
# Constraint # added constraint: constraint((T0315)N10.CB, (T0315)R45.CB) [> 3.6052 = 6.0087 < 7.8113] w=0.1859 to align
# Constraint # added constraint: constraint((T0315)A227.CB, (T0315)Y238.CB) [> 3.8723 = 6.4538 < 8.3900] w=0.1858 to align
# Constraint # added constraint: constraint((T0315)F38.CB, (T0315)V65.CB) [> 4.0817 = 6.8029 < 8.8438] w=0.1858 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)E202.CB) [> 3.9898 = 6.6496 < 8.6445] w=0.1858 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)V179.CB) [> 3.4773 = 5.7955 < 7.5342] w=0.1856 to align
# Constraint # added constraint: constraint((T0315)R130.CB, (T0315)S156.CB) [> 3.6488 = 6.0813 < 7.9058] w=0.1851 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)F155.CB) [> 4.0268 = 6.7114 < 8.7248] w=0.1841 to align
# Constraint # added constraint: constraint((T0315)A191.CB, (T0315)V201.CB) [> 4.1432 = 6.9053 < 8.9768] w=0.1841 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)V35.CB) [> 3.6336 = 6.0560 < 7.8727] w=0.1840 to align
# Constraint # added constraint: constraint((T0315)P64.CB, (T0315)W77.CB) [> 3.4477 = 5.7462 < 7.4701] w=0.1839 to align
# Constraint # added constraint: constraint((T0315)D96.CB, (T0315)R130.CB) [> 2.8432 = 4.7386 < 6.1602] w=0.1838 to align
# Constraint # added constraint: constraint((T0315)W99.CB, (T0315)R130.CB) [> 4.1195 = 6.8659 < 8.9256] w=0.1789 to align
# Constraint # added constraint: constraint((T0315)N39.CB, (T0315)D66.CB) [> 2.9757 = 4.9594 < 6.4473] w=0.1784 to align
# Constraint # added constraint: constraint((T0315)T133.CB, (T0315)G157.CA) [> 4.1745 = 6.9574 < 9.0447] w=0.1784 to align
# Constraint # added constraint: constraint((T0315)A231.CB, (T0315)E240.CB) [> 4.3826 = 7.3044 < 9.4957] w=0.1784 to align
# Constraint # added constraint: constraint((T0315)V65.CB, (T0315)D96.CB) [> 3.5732 = 5.9553 < 7.7419] w=0.1783 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)G89.CA) [> 4.1354 = 6.8924 < 8.9601] w=0.1783 to align
# Constraint # added constraint: constraint((T0315)T5.CB, (T0315)G176.CA) [> 4.3821 = 7.3035 < 9.4945] w=0.1781 to align
# Constraint # added constraint: constraint((T0315)T180.CB, (T0315)V226.CB) [> 3.9052 = 6.5087 < 8.4613] w=0.1778 to align
# Constraint # added constraint: constraint((T0315)H98.CB, (T0315)N129.CB) [> 4.2747 = 7.1244 < 9.2618] w=0.1775 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)I127.CB) [> 4.0553 = 6.7588 < 8.7865] w=0.1774 to align
# Constraint # added constraint: constraint((T0315)L95.CB, (T0315)D135.CB) [> 3.7111 = 6.1852 < 8.0408] w=0.1710 to align
# Constraint # added constraint: constraint((T0315)V21.CB, (T0315)A221.CB) [> 4.1872 = 6.9787 < 9.0724] w=0.1710 to align
# Constraint # added constraint: constraint((T0315)L9.CB, (T0315)Y207.CB) [> 3.2660 = 5.4433 < 7.0763] w=0.1709 to align
# Constraint # added constraint: constraint((T0315)L208.CB, (T0315)N218.CB) [> 3.6444 = 6.0740 < 7.8962] w=0.1709 to align
# Constraint # added constraint: constraint((T0315)A145.CB, (T0315)F171.CB) [> 4.0930 = 6.8216 < 8.8681] w=0.1700 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)V190.CB) [> 4.4343 = 7.3905 < 9.6076] w=0.1695 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)Y172.CB) [> 4.3266 = 7.2110 < 9.3743] w=0.1693 to align
# Constraint # added constraint: constraint((T0315)A162.CB, (T0315)S195.CB) [> 3.5143 = 5.8572 < 7.6143] w=0.1680 to align
# Constraint # added constraint: constraint((T0315)T224.CB, (T0315)T245.CB) [> 4.4256 = 7.3760 < 9.5888] w=0.1635 to align
# Constraint # added constraint: constraint((T0315)F38.CB, (T0315)I59.CB) [> 3.5933 = 5.9888 < 7.7854] w=0.1635 to align
# Constraint # added constraint: constraint((T0315)S156.CB, (T0315)G176.CA) [> 3.9503 = 6.5838 < 8.5590] w=0.1634 to align
# Constraint # added constraint: constraint((T0315)V179.CB, (T0315)R222.CB) [> 3.4101 = 5.6836 < 7.3886] w=0.1631 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)M152.CB) [> 4.3846 = 7.3077 < 9.5000] w=0.1631 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)I126.CB) [> 4.3256 = 7.2092 < 9.3720] w=0.1627 to align
# Constraint # added constraint: constraint((T0315)A67.CB, (T0315)V106.CB) [> 3.5645 = 5.9409 < 7.7231] w=0.1561 to align
# Constraint # added constraint: constraint((T0315)S209.CB, (T0315)R222.CB) [> 3.8218 = 6.3696 < 8.2805] w=0.1561 to align
# Constraint # added constraint: constraint((T0315)H74.CB, (T0315)E109.CB) [> 3.8015 = 6.3358 < 8.2365] w=0.1561 to align
# Constraint # added constraint: constraint((T0315)S209.CB, (T0315)N218.CB) [> 2.8047 = 4.6744 < 6.0768] w=0.1561 to align
# Constraint # added constraint: constraint((T0315)F38.CB, (T0315)P64.CB) [> 3.5264 = 5.8774 < 7.6406] w=0.1560 to align
# Constraint # added constraint: constraint((T0315)F70.CB, (T0315)V106.CB) [> 3.8747 = 6.4578 < 8.3952] w=0.1560 to align
# Constraint # added constraint: constraint((T0315)L95.CB, (T0315)I127.CB) [> 4.0379 = 6.7298 < 8.7488] w=0.1560 to align
# Constraint # added constraint: constraint((T0315)T180.CB, (T0315)D204.CB) [> 4.0053 = 6.6755 < 8.6782] w=0.1560 to align
# Constraint # added constraint: constraint((T0315)Y207.CB, (T0315)E219.CB) [> 3.8823 = 6.4705 < 8.4116] w=0.1559 to align
# Constraint # added constraint: constraint((T0315)T180.CB, (T0315)L225.CB) [> 4.0843 = 6.8071 < 8.8492] w=0.1555 to align
# Constraint # added constraint: constraint((T0315)V21.CB, (T0315)Y207.CB) [> 3.7577 = 6.2628 < 8.1416] w=0.1554 to align
# Constraint # added constraint: constraint((T0315)A67.CB, (T0315)Q114.CB) [> 3.8919 = 6.4865 < 8.4324] w=0.1553 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)I139.CB) [> 3.8055 = 6.3425 < 8.2452] w=0.1549 to align
# Constraint # added constraint: constraint((T0315)G157.CA, (T0315)N183.CB) [> 3.2149 = 5.3582 < 6.9656] w=0.1547 to align
# Constraint # added constraint: constraint((T0315)V179.CB, (T0315)Q229.CB) [> 3.7543 = 6.2572 < 8.1343] w=0.1487 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)D204.CB) [> 3.5310 = 5.8849 < 7.6504] w=0.1487 to align
# Constraint # added constraint: constraint((T0315)P187.CB, (T0315)L236.CB) [> 4.5203 = 7.5338 < 9.7939] w=0.1487 to align
# Constraint # added constraint: constraint((T0315)N39.CB, (T0315)G61.CA) [> 4.2879 = 7.1465 < 9.2905] w=0.1486 to align
# Constraint # added constraint: constraint((T0315)V179.CB, (T0315)A205.CB) [> 4.1514 = 6.9189 < 8.9946] w=0.1486 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)I126.CB) [> 4.3235 = 7.2058 < 9.3675] w=0.1486 to align
# Constraint # added constraint: constraint((T0315)Y97.CB, (T0315)N129.CB) [> 4.0244 = 6.7074 < 8.7196] w=0.1480 to align
# Constraint # added constraint: constraint((T0315)V65.CB, (T0315)H98.CB) [> 3.6147 = 6.0245 < 7.8318] w=0.1478 to align
# Constraint # added constraint: constraint((T0315)G94.CA, (T0315)C136.CB) [> 3.8981 = 6.4969 < 8.4460] w=0.1413 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)S154.CB) [> 3.7896 = 6.3159 < 8.2107] w=0.1413 to align
# Constraint # added constraint: constraint((T0315)G94.CA, (T0315)A132.CB) [> 4.3429 = 7.2382 < 9.4096] w=0.1413 to align
# Constraint # added constraint: constraint((T0315)Q114.CB, (T0315)I127.CB) [> 3.8894 = 6.4823 < 8.4270] w=0.1411 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)H128.CB) [> 3.8759 = 6.4598 < 8.3978] w=0.1402 to align
# Constraint # added constraint: constraint((T0315)P64.CB, (T0315)Y97.CB) [> 4.0820 = 6.8032 < 8.8442] w=0.1390 to align
# Constraint # added constraint: constraint((T0315)P206.CB, (T0315)V223.CB) [> 4.3941 = 7.3236 < 9.5206] w=0.1386 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)I88.CB) [> 4.3677 = 7.2796 < 9.4634] w=0.1383 to align
# Constraint # added constraint: constraint((T0315)M196.CB, (T0315)L236.CB) [> 4.1603 = 6.9339 < 9.0141] w=0.1338 to align
# Constraint # added constraint: constraint((T0315)F38.CB, (T0315)D66.CB) [> 3.5280 = 5.8800 < 7.6440] w=0.1338 to align
# Constraint # added constraint: constraint((T0315)S156.CB, (T0315)P187.CB) [> 3.7601 = 6.2669 < 8.1470] w=0.1338 to align
# Constraint # added constraint: constraint((T0315)A82.CB, (T0315)A118.CB) [> 3.9916 = 6.6527 < 8.6485] w=0.1338 to align
# Constraint # added constraint: constraint((T0315)V179.CB, (T0315)D204.CB) [> 4.3028 = 7.1714 < 9.3228] w=0.1337 to align
# Constraint # added constraint: constraint((T0315)R198.CB, (T0315)K251.CB) [> 4.0839 = 6.8064 < 8.8484] w=0.1337 to align
# Constraint # added constraint: constraint((T0315)V201.CB, (T0315)V241.CB) [> 4.5104 = 7.5173 < 9.7725] w=0.1337 to align
# Constraint # added constraint: constraint((T0315)V179.CB, (T0315)V190.CB) [> 4.1247 = 6.8744 < 8.9368] w=0.1332 to align
# Constraint # added constraint: constraint((T0315)A82.CB, (T0315)K122.CB) [> 4.0349 = 6.7248 < 8.7423] w=0.1331 to align
# Constraint # added constraint: constraint((T0315)F70.CB, (T0315)Q114.CB) [> 3.6142 = 6.0237 < 7.8308] w=0.1270 to align
# Constraint # added constraint: constraint((T0315)V179.CB, (T0315)I230.CB) [> 4.0646 = 6.7744 < 8.8067] w=0.1264 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)L208.CB) [> 3.5132 = 5.8553 < 7.6118] w=0.1264 to align
# Constraint # added constraint: constraint((T0315)G149.CA, (T0315)I173.CB) [> 3.8748 = 6.4580 < 8.3954] w=0.1263 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)Q114.CB) [> 3.7238 = 6.2063 < 8.0682] w=0.1261 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)N129.CB) [> 4.4305 = 7.3842 < 9.5995] w=0.1258 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)D204.CB) [> 4.5086 = 7.5144 < 9.7687] w=0.1189 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)L208.CB) [> 3.2722 = 5.4538 < 7.0899] w=0.1189 to align
# Constraint # added constraint: constraint((T0315)G149.CA, (T0315)L169.CB) [> 4.4679 = 7.4465 < 9.6804] w=0.1189 to align
# Constraint # added constraint: constraint((T0315)I68.CB, (T0315)Q114.CB) [> 4.5127 = 7.5211 < 9.7774] w=0.1189 to align
# Constraint # added constraint: constraint((T0315)F181.CB, (T0315)H211.CB) [> 3.5276 = 5.8793 < 7.6431] w=0.1188 to align
# Constraint # added constraint: constraint((T0315)A67.CB, (T0315)I78.CB) [> 4.2603 = 7.1004 < 9.2306] w=0.1188 to align
# Constraint # added constraint: constraint((T0315)A67.CB, (T0315)H98.CB) [> 3.6816 = 6.1361 < 7.9769] w=0.1188 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)P178.CB) [> 3.8802 = 6.4671 < 8.4072] w=0.1188 to align
# Constraint # added constraint: constraint((T0315)D51.CB, (T0315)P85.CB) [> 4.1762 = 6.9604 < 9.0485] w=0.1187 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)L175.CB) [> 4.1738 = 6.9563 < 9.0432] w=0.1186 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)G91.CA) [> 3.6021 = 6.0034 < 7.8045] w=0.1184 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)N183.CB) [> 3.5724 = 5.9539 < 7.7401] w=0.1183 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)L199.CB) [> 3.8113 = 6.3522 < 8.2579] w=0.1183 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)V165.CB) [> 4.1000 = 6.8334 < 8.8834] w=0.1179 to align
# Constraint # added constraint: constraint((T0315)T180.CB, (T0315)P210.CB) [> 2.8379 = 4.7299 < 6.1488] w=0.1115 to align
# Constraint # added constraint: constraint((T0315)E228.CB, (T0315)V241.CB) [> 4.4334 = 7.3889 < 9.6056] w=0.1115 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)Y97.CB) [> 3.6762 = 6.1270 < 7.9651] w=0.1115 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)G94.CA) [> 4.2391 = 7.0652 < 9.1847] w=0.1114 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)V190.CB) [> 3.7990 = 6.3316 < 8.2311] w=0.1114 to align
# Constraint # added constraint: constraint((T0315)G94.CA, (T0315)Q114.CB) [> 4.3806 = 7.3009 < 9.4912] w=0.1113 to align
# Constraint # added constraint: constraint((T0315)V65.CB, (T0315)G91.CA) [> 4.1434 = 6.9057 < 8.9774] w=0.1113 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)G177.CA) [> 4.0925 = 6.8208 < 8.8670] w=0.1112 to align
# Constraint # added constraint: constraint((T0315)L225.CB, (T0315)Q244.CB) [> 3.2383 = 5.3972 < 7.0163] w=0.1092 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)L255.CB) [> 4.0040 = 6.6733 < 8.6753] w=0.1041 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)K182.CB) [> 3.5515 = 5.9191 < 7.6948] w=0.1040 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)I126.CB) [> 3.8270 = 6.3784 < 8.2919] w=0.1040 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)Y97.CB) [> 3.8449 = 6.4081 < 8.3306] w=0.1040 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)D204.CB) [> 4.1850 = 6.9750 < 9.0675] w=0.1040 to align
# Constraint # added constraint: constraint((T0315)G149.CA, (T0315)S174.CB) [> 4.0354 = 6.7257 < 8.7434] w=0.1040 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)G150.CA) [> 3.9830 = 6.6383 < 8.6298] w=0.1039 to align
# Constraint # added constraint: constraint((T0315)A67.CB, (T0315)W99.CB) [> 3.9117 = 6.5195 < 8.4753] w=0.1038 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)G176.CA) [> 3.7930 = 6.3216 < 8.2181] w=0.1038 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)I88.CB) [> 3.6765 = 6.1275 < 7.9658] w=0.1035 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)Q114.CB) [> 3.5275 = 5.8791 < 7.6429] w=0.1035 to align
# Constraint # added constraint: constraint((T0315)M93.CB, (T0315)R130.CB) [> 3.9767 = 6.6278 < 8.6161] w=0.1027 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)L199.CB) [> 3.7870 = 6.3117 < 8.2052] w=0.1024 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)H211.CB) [> 4.3675 = 7.2792 < 9.4630] w=0.0966 to align
# Constraint # added constraint: constraint((T0315)D17.CB, (T0315)L208.CB) [> 4.5967 = 7.6612 < 9.9596] w=0.0966 to align
# Constraint # added constraint: constraint((T0315)P210.CB, (T0315)L225.CB) [> 3.0087 = 5.0144 < 6.5188] w=0.0966 to align
# Constraint # added constraint: constraint((T0315)S156.CB, (T0315)G177.CA) [> 3.7288 = 6.2146 < 8.0790] w=0.0966 to align
# Constraint # added constraint: constraint((T0315)N10.CB, (T0315)V36.CB) [> 3.9627 = 6.6046 < 8.5859] w=0.0966 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)A205.CB) [> 3.8235 = 6.3725 < 8.2842] w=0.0965 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)I139.CB) [> 3.9969 = 6.6615 < 8.6599] w=0.0896 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)P210.CB) [> 2.6767 = 4.4611 < 5.7995] w=0.0892 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)L208.CB) [> 3.9152 = 6.5253 < 8.4829] w=0.0892 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)H128.CB) [> 4.5488 = 7.5813 < 9.8557] w=0.0892 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)I230.CB) [> 4.4771 = 7.4618 < 9.7004] w=0.0892 to align
# Constraint # added constraint: constraint((T0315)D11.CB, (T0315)F38.CB) [> 3.8977 = 6.4962 < 8.4450] w=0.0892 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)K122.CB) [> 4.2744 = 7.1239 < 9.2611] w=0.0892 to align
# Constraint # added constraint: constraint((T0315)Y14.CB, (T0315)L208.CB) [> 3.2087 = 5.3478 < 6.9521] w=0.0892 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)A205.CB) [> 4.0592 = 6.7654 < 8.7950] w=0.0892 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)G150.CA) [> 4.2553 = 7.0922 < 9.2198] w=0.0890 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)Y53.CB) [> 4.1757 = 6.9596 < 9.0475] w=0.0883 to align
# Constraint # added constraint: constraint((T0315)A132.CB, (T0315)S158.CB) [> 4.2569 = 7.0948 < 9.2233] w=0.0818 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)I60.CB) [> 4.1842 = 6.9736 < 9.0657] w=0.0818 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)W62.CB) [> 4.4118 = 7.3531 < 9.5590] w=0.0818 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)W62.CB) [> 3.7672 = 6.2787 < 8.1623] w=0.0818 to align
# Constraint # added constraint: constraint((T0315)V65.CB, (T0315)H74.CB) [> 3.8401 = 6.4002 < 8.3202] w=0.0818 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)V35.CB) [> 4.6570 = 7.7616 < 10.0901] w=0.0818 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)I125.CB) [> 4.0432 = 6.7387 < 8.7604] w=0.0817 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)H128.CB) [> 3.8214 = 6.3691 < 8.2798] w=0.0815 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)G91.CA) [> 3.4206 = 5.7010 < 7.4113] w=0.0814 to align
# Constraint # added constraint: constraint((T0315)D96.CB, (T0315)I127.CB) [> 4.1715 = 6.9525 < 9.0382] w=0.0805 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)P178.CB) [> 3.5736 = 5.9559 < 7.7427] w=0.0744 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)G91.CA) [> 4.3462 = 7.2436 < 9.4167] w=0.0743 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)T246.CB) [> 4.3802 = 7.3004 < 9.4905] w=0.0743 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)H128.CB) [> 4.1861 = 6.9768 < 9.0698] w=0.0743 to align
# Constraint # added constraint: constraint((T0315)S209.CB, (T0315)A221.CB) [> 3.6016 = 6.0027 < 7.8035] w=0.0743 to align
# Constraint # added constraint: constraint((T0315)V21.CB, (T0315)L208.CB) [> 3.4845 = 5.8076 < 7.5498] w=0.0742 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)G176.CA) [> 4.0108 = 6.6847 < 8.6901] w=0.0736 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)I173.CB) [> 4.4181 = 7.3635 < 9.5725] w=0.0729 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)M152.CB) [> 4.5006 = 7.5010 < 9.7513] w=0.0674 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)C242.CB) [> 3.5359 = 5.8932 < 7.6611] w=0.0669 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)L208.CB) [> 4.2403 = 7.0671 < 9.1872] w=0.0669 to align
# Constraint # added constraint: constraint((T0315)I68.CB, (T0315)I78.CB) [> 3.2910 = 5.4850 < 7.1304] w=0.0669 to align
# Constraint # added constraint: constraint((T0315)F181.CB, (T0315)D204.CB) [> 4.3919 = 7.3198 < 9.5158] w=0.0669 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)S174.CB) [> 4.3437 = 7.2394 < 9.4113] w=0.0669 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)S174.CB) [> 4.3691 = 7.2819 < 9.4664] w=0.0668 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)G176.CA) [> 4.4299 = 7.3831 < 9.5980] w=0.0667 to align
# Constraint # added constraint: constraint((T0315)A67.CB, (T0315)G91.CA) [> 3.6788 = 6.1313 < 7.9707] w=0.0667 to align
# Constraint # added constraint: constraint((T0315)A67.CB, (T0315)H128.CB) [> 4.1463 = 6.9105 < 8.9836] w=0.0662 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)G91.CA) [> 4.3551 = 7.2585 < 9.4361] w=0.0649 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)D204.CB) [> 4.6121 = 7.6868 < 9.9928] w=0.0595 to align
# Constraint # added constraint: constraint((T0315)S174.CB, (T0315)D204.CB) [> 4.5073 = 7.5122 < 9.7659] w=0.0595 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)I60.CB) [> 3.8356 = 6.3926 < 8.3104] w=0.0595 to align
# Constraint # added constraint: constraint((T0315)S41.CB, (T0315)G58.CA) [> 4.4741 = 7.4568 < 9.6938] w=0.0595 to align
# Constraint # added constraint: constraint((T0315)F181.CB, (T0315)E219.CB) [> 4.3988 = 7.3313 < 9.5307] w=0.0595 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)S154.CB) [> 3.4698 = 5.7829 < 7.5178] w=0.0595 to align
# Constraint # added constraint: constraint((T0315)Y14.CB, (T0315)N39.CB) [> 4.1618 = 6.9363 < 9.0172] w=0.0595 to align
# Constraint # added constraint: constraint((T0315)Y14.CB, (T0315)T42.CB) [> 3.8890 = 6.4816 < 8.4262] w=0.0595 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)G61.CA) [> 4.1941 = 6.9901 < 9.0872] w=0.0594 to align
# Constraint # added constraint: constraint((T0315)T180.CB, (T0315)V190.CB) [> 3.8900 = 6.4833 < 8.4282] w=0.0592 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)S174.CB) [> 4.1032 = 6.8387 < 8.8903] w=0.0591 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)I59.CB) [> 3.7633 = 6.2722 < 8.1538] w=0.0591 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)L175.CB) [> 3.7458 = 6.2430 < 8.1159] w=0.0580 to align
# Constraint # added constraint: constraint((T0315)S174.CB, (T0315)V190.CB) [> 3.4631 = 5.7719 < 7.5035] w=0.0578 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)P210.CB) [> 4.3536 = 7.2559 < 9.4327] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)G177.CA) [> 3.4168 = 5.6947 < 7.4030] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)G61.CA) [> 4.6621 = 7.7702 < 10.1012] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)I161.CB) [> 4.1652 = 6.9419 < 9.0245] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)G176.CA) [> 4.1672 = 6.9453 < 9.0288] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)I78.CB) [> 4.1047 = 6.8412 < 8.8936] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)L208.CB, (T0315)R217.CB) [> 3.9426 = 6.5710 < 8.5423] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)I161.CB) [> 3.7047 = 6.1745 < 8.0268] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)V190.CB) [> 3.3123 = 5.5205 < 7.1767] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)V190.CB) [> 3.4587 = 5.7645 < 7.4939] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)S154.CB) [> 3.4933 = 5.8222 < 7.5688] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)A132.CB, (T0315)I164.CB) [> 3.5487 = 5.9146 < 7.6890] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)I173.CB) [> 3.5968 = 5.9946 < 7.7930] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)P210.CB) [> 4.1854 = 6.9757 < 9.0684] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)I59.CB) [> 4.2272 = 7.0454 < 9.1590] w=0.0520 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)D96.CB) [> 4.1654 = 6.9423 < 9.0250] w=0.0518 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)T203.CB) [> 4.0945 = 6.8241 < 8.8713] w=0.0517 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)H128.CB) [> 4.4842 = 7.4737 < 9.7158] w=0.0516 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)M152.CB) [> 4.2505 = 7.0842 < 9.2095] w=0.0515 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)V190.CB) [> 4.4159 = 7.3599 < 9.5679] w=0.0513 to align
# Constraint # added constraint: constraint((T0315)V190.CB, (T0315)V201.CB) [> 3.9313 = 6.5521 < 8.5178] w=0.0512 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)D204.CB) [> 3.6167 = 6.0279 < 7.8362] w=0.0510 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)L175.CB) [> 3.7378 = 6.2296 < 8.0985] w=0.0506 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)P206.CB) [> 3.9621 = 6.6035 < 8.5845] w=0.0499 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)S174.CB) [> 4.4176 = 7.3627 < 9.5716] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)P178.CB) [> 4.4472 = 7.4120 < 9.6355] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)I125.CB, (T0315)M152.CB) [> 4.2108 = 7.0179 < 9.1233] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)I125.CB, (T0315)S174.CB) [> 3.3461 = 5.5769 < 7.2499] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)A205.CB) [> 3.7861 = 6.3101 < 8.2031] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)V201.CB) [> 3.3618 = 5.6030 < 7.2839] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)T203.CB) [> 3.5092 = 5.8487 < 7.6033] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)A231.CB, (T0315)T245.CB) [> 3.7533 = 6.2554 < 8.1321] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)V201.CB) [> 4.3353 = 7.2255 < 9.3932] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)A205.CB, (T0315)R214.CB) [> 4.1243 = 6.8738 < 8.9360] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)G177.CA) [> 4.3310 = 7.2183 < 9.3838] w=0.0446 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)D204.CB) [> 4.2328 = 7.0547 < 9.1711] w=0.0445 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)T203.CB) [> 4.6470 = 7.7450 < 10.0684] w=0.0445 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)G61.CA) [> 3.8977 = 6.4962 < 8.4451] w=0.0445 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)L175.CB) [> 4.1400 = 6.9000 < 8.9700] w=0.0445 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)G177.CA) [> 4.7141 = 7.8568 < 10.2138] w=0.0444 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)G176.CA) [> 4.1816 = 6.9694 < 9.0602] w=0.0444 to align
# Constraint # added constraint: constraint((T0315)T180.CB, (T0315)T203.CB) [> 4.1941 = 6.9901 < 9.0872] w=0.0444 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)I59.CB) [> 3.9794 = 6.6323 < 8.6220] w=0.0443 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)F34.CB) [> 3.4309 = 5.7181 < 7.4336] w=0.0438 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)S174.CB) [> 4.0678 = 6.7797 < 8.8137] w=0.0436 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)P206.CB) [> 3.7494 = 6.2490 < 8.1237] w=0.0431 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)I88.CB) [> 4.4830 = 7.4716 < 9.7131] w=0.0379 to align
# Constraint # added constraint: constraint((T0315)K122.CB, (T0315)G149.CA) [> 4.5208 = 7.5346 < 9.7950] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)P178.CB) [> 3.2163 = 5.3605 < 6.9687] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)Y53.CB, (T0315)W62.CB) [> 4.6231 = 7.7051 < 10.0166] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)I151.CB) [> 4.6684 = 7.7807 < 10.1149] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)V190.CB) [> 4.2479 = 7.0799 < 9.2039] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)T42.CB, (T0315)W62.CB) [> 4.5889 = 7.6481 < 9.9425] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)W62.CB) [> 4.3230 = 7.2051 < 9.3666] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)H153.CB) [> 4.7067 = 7.8445 < 10.1978] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)Y57.CB) [> 3.8802 = 6.4669 < 8.4070] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)T203.CB) [> 4.0100 = 6.6833 < 8.6883] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)G177.CA) [> 3.9246 = 6.5409 < 8.5032] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)I127.CB) [> 3.6695 = 6.1159 < 7.9507] w=0.0372 to align
# Constraint # added constraint: constraint((T0315)F181.CB, (T0315)R214.CB) [> 4.2501 = 7.0834 < 9.2085] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)H128.CB) [> 3.9108 = 6.5180 < 8.4734] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)V201.CB) [> 4.0391 = 6.7318 < 8.7513] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)I151.CB) [> 4.3128 = 7.1880 < 9.3445] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)I126.CB) [> 3.8404 = 6.4007 < 8.3209] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)I125.CB) [> 3.9555 = 6.5926 < 8.5703] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)I125.CB) [> 3.5663 = 5.9438 < 7.7270] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)I127.CB) [> 4.3264 = 7.2108 < 9.3740] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)V201.CB) [> 3.4318 = 5.7197 < 7.4356] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)Y57.CB) [> 3.8859 = 6.4766 < 8.4195] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)I60.CB) [> 4.0058 = 6.6763 < 8.6791] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)G58.CA) [> 3.2326 = 5.3876 < 7.0039] w=0.0371 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)A205.CB) [> 3.7031 = 6.1718 < 8.0233] w=0.0370 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)I151.CB) [> 4.0843 = 6.8072 < 8.8493] w=0.0369 to align
# Constraint # added constraint: constraint((T0315)E20.CB, (T0315)A205.CB) [> 4.6817 = 7.8028 < 10.1437] w=0.0369 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)I78.CB) [> 3.4173 = 5.6956 < 7.4043] w=0.0369 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)V201.CB) [> 4.5805 = 7.6341 < 9.9244] w=0.0368 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)I59.CB) [> 4.2327 = 7.0545 < 9.1708] w=0.0365 to align
# Constraint # added constraint: constraint((T0315)G37.CA, (T0315)D66.CB) [> 3.6701 = 6.1168 < 7.9519] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)I151.CB) [> 3.5821 = 5.9701 < 7.7611] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)G176.CA) [> 3.4476 = 5.7460 < 7.4698] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)I127.CB) [> 4.2091 = 7.0152 < 9.1198] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)Y207.CB) [> 3.7942 = 6.3236 < 8.2207] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)S154.CB) [> 4.7185 = 7.8641 < 10.2234] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)V201.CB) [> 3.1056 = 5.1761 < 6.7289] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)T203.CB) [> 3.8590 = 6.4317 < 8.3612] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)D204.CB) [> 3.5019 = 5.8365 < 7.5874] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)G91.CA) [> 4.3047 = 7.1746 < 9.3270] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)L95.CB, (T0315)I126.CB) [> 4.4036 = 7.3394 < 9.5412] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)L95.CB, (T0315)I125.CB) [> 3.2945 = 5.4908 < 7.1381] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)I126.CB) [> 4.0120 = 6.6867 < 8.6927] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)I126.CB) [> 4.3581 = 7.2636 < 9.4426] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)N129.CB) [> 3.7661 = 6.2768 < 8.1599] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)Y57.CB) [> 2.3710 = 3.9516 < 5.1371] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)V179.CB, (T0315)L208.CB) [> 3.5560 = 5.9266 < 7.7046] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)V201.CB) [> 4.4759 = 7.4598 < 9.6977] w=0.0297 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)P206.CB) [> 2.7567 = 4.5944 < 5.9728] w=0.0296 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)S154.CB) [> 4.3901 = 7.3168 < 9.5118] w=0.0295 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)W62.CB) [> 3.6547 = 6.0911 < 7.9185] w=0.0294 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)S154.CB) [> 3.8397 = 6.3995 < 8.3194] w=0.0293 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)A205.CB) [> 3.1432 = 5.2387 < 6.8103] w=0.0283 to align
# Constraint # added constraint: constraint((T0315)D135.CB, (T0315)K168.CB) [> 4.1050 = 6.8417 < 8.8942] w=0.0283 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)G58.CA) [> 4.4521 = 7.4201 < 9.6462] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)N129.CB) [> 4.4928 = 7.4880 < 9.7345] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)N129.CB) [> 4.3120 = 7.1866 < 9.3426] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)D204.CB) [> 3.6109 = 6.0181 < 7.8235] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)M1.CB, (T0315)C242.CB) [> 3.2627 = 5.4379 < 7.0693] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)F155.CB) [> 3.8475 = 6.4125 < 8.3363] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)M152.CB) [> 4.4749 = 7.4582 < 9.6956] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)L175.CB) [> 4.3216 = 7.2026 < 9.3634] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)G177.CA) [> 3.6498 = 6.0830 < 7.9079] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)G89.CA) [> 4.7151 = 7.8584 < 10.2160] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)I125.CB) [> 4.5885 = 7.6476 < 9.9418] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)G176.CA) [> 4.7247 = 7.8744 < 10.2368] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)P178.CB) [> 4.2490 = 7.0816 < 9.2061] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)Q114.CB, (T0315)I126.CB) [> 4.1893 = 6.9822 < 9.0768] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)P178.CB) [> 3.9296 = 6.5493 < 8.5141] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)G177.CA) [> 4.0213 = 6.7022 < 8.7129] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)P178.CB, (T0315)R214.CB) [> 4.5900 = 7.6501 < 9.9451] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)I125.CB, (T0315)I173.CB) [> 3.1931 = 5.3218 < 6.9183] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)L175.CB) [> 3.3290 = 5.5484 < 7.2129] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)G176.CA) [> 3.9072 = 6.5121 < 8.4657] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)G58.CA) [> 4.2300 = 7.0500 < 9.1650] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)S174.CB, (T0315)A205.CB) [> 4.1540 = 6.9233 < 9.0002] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)L95.CB, (T0315)Q114.CB) [> 3.8956 = 6.4927 < 8.4404] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)S158.CB, (T0315)A184.CB) [> 3.9603 = 6.6005 < 8.5806] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)I127.CB) [> 3.9329 = 6.5549 < 8.5213] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)V190.CB) [> 3.8593 = 6.4322 < 8.3618] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)I88.CB) [> 3.9685 = 6.6142 < 8.5985] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)H128.CB) [> 3.7686 = 6.2809 < 8.1652] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)A205.CB) [> 3.0500 = 5.0833 < 6.6083] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)G149.CA) [> 3.9654 = 6.6090 < 8.5918] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)G89.CA) [> 4.0706 = 6.7844 < 8.8197] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)I127.CB) [> 4.1183 = 6.8638 < 8.9230] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)F181.CB, (T0315)Y213.CB) [> 4.7154 = 7.8590 < 10.2168] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)I127.CB) [> 3.8077 = 6.3462 < 8.2500] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)H128.CB) [> 3.7990 = 6.3317 < 8.2312] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)N129.CB) [> 4.3719 = 7.2865 < 9.4725] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)N129.CB) [> 3.3674 = 5.6123 < 7.2960] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)H128.CB) [> 3.6616 = 6.1026 < 7.9334] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)P210.CB) [> 3.7197 = 6.1996 < 8.0594] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)V201.CB) [> 4.1192 = 6.8653 < 8.9249] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)G177.CA) [> 4.5228 = 7.5380 < 9.7993] w=0.0223 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)I127.CB) [> 4.5707 = 7.6179 < 9.9032] w=0.0221 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)H128.CB) [> 3.2663 = 5.4438 < 7.0769] w=0.0221 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)R32.CB) [> 4.1226 = 6.8710 < 8.9323] w=0.0217 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)I125.CB) [> 4.3753 = 7.2922 < 9.4799] w=0.0217 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)M152.CB) [> 3.7363 = 6.2271 < 8.0953] w=0.0153 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)Y57.CB) [> 4.7597 = 7.9328 < 10.3126] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)G157.CA, (T0315)K168.CB) [> 4.0785 = 6.7975 < 8.8368] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)P206.CB) [> 3.1872 = 5.3120 < 6.9056] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)A205.CB) [> 4.6872 = 7.8119 < 10.1555] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)F155.CB, (T0315)V201.CB) [> 3.2482 = 5.4137 < 7.0378] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)H6.CB, (T0315)G150.CA) [> 4.7849 = 7.9748 < 10.3673] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)G150.CA) [> 4.4871 = 7.4785 < 9.7220] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)G150.CA, (T0315)L175.CB) [> 4.0752 = 6.7921 < 8.8297] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)M152.CB, (T0315)P178.CB) [> 3.8197 = 6.3661 < 8.2759] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)I125.CB, (T0315)H153.CB) [> 3.6885 = 6.1474 < 7.9917] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)M152.CB) [> 4.0777 = 6.7961 < 8.8350] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)A205.CB) [> 4.6091 = 7.6819 < 9.9865] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)S154.CB, (T0315)A205.CB) [> 4.2753 = 7.1255 < 9.2632] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)I60.CB) [> 3.7924 = 6.3206 < 8.2168] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)E44.CB, (T0315)Y53.CB) [> 4.3696 = 7.2826 < 9.4675] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)H153.CB) [> 4.4735 = 7.4559 < 9.6926] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)I125.CB) [> 3.9212 = 6.5353 < 8.4959] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)H128.CB) [> 4.4697 = 7.4495 < 9.6844] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)G91.CA) [> 4.4587 = 7.4311 < 9.6604] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)H153.CB) [> 4.0712 = 6.7854 < 8.8210] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)G150.CA) [> 3.9400 = 6.5666 < 8.5366] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)G91.CA) [> 4.1064 = 6.8440 < 8.8972] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)G91.CA) [> 3.6224 = 6.0373 < 7.8485] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)I173.CB) [> 2.7710 = 4.6184 < 6.0039] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)N129.CB, (T0315)S174.CB) [> 4.2220 = 7.0366 < 9.1476] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)G149.CA) [> 3.5160 = 5.8600 < 7.6180] w=0.0149 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)I127.CB) [> 4.5728 = 7.6213 < 9.9077] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)S154.CB) [> 4.7797 = 7.9661 < 10.3560] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)N129.CB) [> 3.6095 = 6.0158 < 7.8205] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)G58.CA, (T0315)Q114.CB) [> 4.1761 = 6.9602 < 9.0483] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)H128.CB) [> 3.2468 = 5.4113 < 7.0347] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)N129.CB) [> 4.3766 = 7.2942 < 9.4825] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)H153.CB) [> 3.6771 = 6.1285 < 7.9670] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)Q114.CB) [> 4.3409 = 7.2349 < 9.4053] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)G58.CA) [> 4.6072 = 7.6786 < 9.9822] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)I78.CB, (T0315)K122.CB) [> 4.3065 = 7.1775 < 9.3308] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)Q229.CB, (T0315)Y238.CB) [> 4.7786 = 7.9644 < 10.3537] w=0.0148 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)V201.CB) [> 3.4744 = 5.7907 < 7.5279] w=0.0145 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)I151.CB) [> 4.3976 = 7.3294 < 9.5282] w=0.0142 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)P206.CB) [> 4.2751 = 7.1252 < 9.2628] w=0.0141 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)V36.CB) [> 3.0465 = 5.0776 < 6.6008] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)I126.CB) [> 4.1071 = 6.8452 < 8.8987] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)H153.CB) [> 3.4140 = 5.6900 < 7.3970] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)V7.CB, (T0315)R32.CB) [> 4.7746 = 7.9577 < 10.3450] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)H153.CB, (T0315)P206.CB) [> 3.7975 = 6.3292 < 8.2280] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)P206.CB) [> 4.4969 = 7.4949 < 9.7434] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)P206.CB, (T0315)V241.CB) [> 4.0355 = 6.7258 < 8.7435] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)Y213.CB, (T0315)Y238.CB) [> 4.7544 = 7.9240 < 10.3011] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)G149.CA) [> 3.5029 = 5.8381 < 7.5895] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)G149.CA) [> 3.6531 = 6.0885 < 7.9150] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G91.CA, (T0315)G150.CA) [> 2.7715 = 4.6191 < 6.0048] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G150.CA, (T0315)V190.CB) [> 4.6687 = 7.7812 < 10.1156] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G150.CA, (T0315)V201.CB) [> 4.2815 = 7.1359 < 9.2766] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)F155.CB) [> 3.1363 = 5.2271 < 6.7952] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)K122.CB, (T0315)L233.CB) [> 4.7765 = 7.9608 < 10.3491] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I173.CB, (T0315)A205.CB) [> 4.0553 = 6.7587 < 8.7864] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)S174.CB, (T0315)P206.CB) [> 4.0786 = 6.7976 < 8.8369] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)L175.CB, (T0315)P206.CB) [> 2.6234 = 4.3723 < 5.6840] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G176.CA, (T0315)P206.CB) [> 4.5846 = 7.6411 < 9.9334] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)F155.CB) [> 4.0466 = 6.7443 < 8.7676] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I151.CB, (T0315)P178.CB) [> 4.7296 = 7.8827 < 10.2475] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G150.CA, (T0315)G176.CA) [> 4.0321 = 6.7202 < 8.7362] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G149.CA, (T0315)A205.CB) [> 4.3579 = 7.2631 < 9.4421] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)D204.CB) [> 4.5745 = 7.6241 < 9.9114] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)K122.CB) [> 4.7620 = 7.9367 < 10.3177] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)V36.CB, (T0315)M152.CB) [> 4.7193 = 7.8655 < 10.2251] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)G61.CA) [> 2.9548 = 4.9247 < 6.4021] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)D4.CB, (T0315)S154.CB) [> 3.8372 = 6.3953 < 8.3139] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)S154.CB) [> 4.5603 = 7.6005 < 9.8806] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)S154.CB) [> 4.2582 = 7.0970 < 9.2261] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)M152.CB) [> 4.2745 = 7.1241 < 9.2613] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)V190.CB, (T0315)D204.CB) [> 4.5339 = 7.5564 < 9.8233] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G177.CA, (T0315)P206.CB) [> 4.7677 = 7.9461 < 10.3299] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I59.CB, (T0315)Q114.CB) [> 3.5315 = 5.8858 < 7.6516] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I60.CB, (T0315)I151.CB) [> 4.7609 = 7.9348 < 10.3153] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)G89.CA) [> 4.5553 = 7.5922 < 9.8699] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G61.CA, (T0315)H153.CB) [> 4.6423 = 7.7371 < 10.0582] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)R32.CB, (T0315)I125.CB) [> 4.4937 = 7.4895 < 9.7364] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)I88.CB) [> 4.4364 = 7.3940 < 9.6122] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)G89.CA) [> 3.2649 = 5.4415 < 7.0739] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)V35.CB, (T0315)V201.CB) [> 4.4805 = 7.4675 < 9.7078] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)Y57.CB, (T0315)V201.CB) [> 4.5739 = 7.6232 < 9.9101] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)G149.CA) [> 4.0206 = 6.7010 < 8.7112] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)G150.CA) [> 3.4041 = 5.6734 < 7.3755] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)G89.CA, (T0315)S174.CB) [> 4.2475 = 7.0792 < 9.2029] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)H128.CB, (T0315)V201.CB) [> 3.4773 = 5.7955 < 7.5342] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I127.CB, (T0315)V201.CB) [> 4.3116 = 7.1860 < 9.3419] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I126.CB, (T0315)V201.CB) [> 4.4517 = 7.4196 < 9.6455] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)I173.CB, (T0315)V201.CB) [> 4.6818 = 7.8031 < 10.1440] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)L2.CB, (T0315)M152.CB) [> 4.6979 = 7.8298 < 10.1788] w=0.0074 to align
# Constraint # added constraint: constraint((T0315)W62.CB, (T0315)I125.CB) [> 4.5871 = 7.6452 < 9.9387] w=0.0072 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)S174.CB) [> 4.4131 = 7.3551 < 9.5616] w=0.0072 to align
# Constraint # added constraint: constraint((T0315)F34.CB, (T0315)H153.CB) [> 4.7416 = 7.9026 < 10.2734] w=0.0068 to align
# Constraint # added constraint: constraint((T0315)I88.CB, (T0315)H153.CB) [> 4.0609 = 6.7681 < 8.7985] w=0.0068 to align
# SetCost created cost = 
#	( 1.0000 * align )
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/constraints_v3/T0315/
# command:# reading script from file servers-clean.under
# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0315/decoys/
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS1.pdb.gz looking for model 1
# choosing archetypes in rotamer library
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_RECOM_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_RECOM_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_RECOM_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_RECOM_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS4
# ReadConformPDB reading from PDB file servers/3Dpro_TS1.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS1
# ReadConformPDB reading from PDB file servers/3Dpro_TS2.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS2
# ReadConformPDB reading from PDB file servers/3Dpro_TS3.pdb.gz looking for model 1
# Found a chain break before 220
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS3
# ReadConformPDB reading from PDB file servers/3Dpro_TS4.pdb.gz looking for model 1
# Found a chain break before 176
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS4
# ReadConformPDB reading from PDB file servers/3Dpro_TS5.pdb.gz looking for model 1
# Found a chain break before 201
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS5
# ReadConformPDB reading from PDB file servers/ABIpro_TS1.pdb.gz looking for model 1
# Found a chain break before 253
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS1
# ReadConformPDB reading from PDB file servers/ABIpro_TS2.pdb.gz looking for model 1
# Found a chain break before 201
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS2
# ReadConformPDB reading from PDB file servers/ABIpro_TS3.pdb.gz looking for model 1
# Found a chain break before 182
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS3
# ReadConformPDB reading from PDB file servers/ABIpro_TS4.pdb.gz looking for model 1
# Found a chain break before 201
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS4
# ReadConformPDB reading from PDB file servers/ABIpro_TS5.pdb.gz looking for model 1
# Found a chain break before 216
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS5
# ReadConformPDB reading from PDB file servers/BayesHH_TS1.pdb.gz looking for model 1
# Found a chain break before 235
# copying to AlignedFragments data structure
# naming current conformation BayesHH_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS1.pdb.gz looking for model 1
# Found a chain break before 212
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS2.pdb.gz looking for model 1
# Found a chain break before 102
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS2
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS3.pdb.gz looking for model 1
# Found a chain break before 235
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS3
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS4.pdb.gz looking for model 1
# Found a chain break before 235
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS4
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS5.pdb.gz looking for model 1
# Found a chain break before 131
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS5
# ReadConformPDB reading from PDB file servers/CIRCLE_TS1.pdb.gz looking for model 1
# Found a chain break before 253
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS1
# ReadConformPDB reading from PDB file servers/CIRCLE_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS2
# ReadConformPDB reading from PDB file servers/CIRCLE_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS3
# ReadConformPDB reading from PDB file servers/CIRCLE_TS4.pdb.gz looking for model 1
# Found a chain break before 223
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS4
# ReadConformPDB reading from PDB file servers/CIRCLE_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS5
# ReadConformPDB reading from PDB file servers/CPHmodels_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation CPHmodels_TS1
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS1.pdb.gz looking for model 1
# Found a chain break before 169
# copying to AlignedFragments data structure
# naming current conformation CaspIta-FOX_TS1
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation CaspIta-FOX_TS2
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation CaspIta-FOX_TS3
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation CaspIta-FOX_TS4
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS5
# ReadConformPDB reading from PDB file servers/Distill_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Distill_TS1
# ReadConformPDB reading from PDB file servers/Distill_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Distill_TS2
# ReadConformPDB reading from PDB file servers/Distill_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Distill_TS3
# ReadConformPDB reading from PDB file servers/Distill_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Distill_TS4
# ReadConformPDB reading from PDB file servers/Distill_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Distill_TS5
# ReadConformPDB reading from PDB file servers/FAMSD_TS1.pdb.gz looking for model 1
# Found a chain break before 205
# copying to AlignedFragments data structure
# naming current conformation FAMSD_TS1
# ReadConformPDB reading from PDB file servers/FAMSD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FAMSD_TS2
# ReadConformPDB reading from PDB file servers/FAMSD_TS3.pdb.gz looking for model 1
# Found a chain break before 103
# copying to AlignedFragments data structure
# naming current conformation FAMSD_TS3
# ReadConformPDB reading from PDB file servers/FAMSD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS4
# ReadConformPDB reading from PDB file servers/FAMSD_TS5.pdb.gz looking for model 1
# Found a chain break before 91
# copying to AlignedFragments data structure
# naming current conformation FAMSD_TS5
# ReadConformPDB reading from PDB file servers/FAMS_TS1.pdb.gz looking for model 1
# Found a chain break before 211
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS1
# ReadConformPDB reading from PDB file servers/FAMS_TS2.pdb.gz looking for model 1
# Found a chain break before 253
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS2
# ReadConformPDB reading from PDB file servers/FAMS_TS3.pdb.gz looking for model 1
# Found a chain break before 223
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS3
# ReadConformPDB reading from PDB file servers/FAMS_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS4
# ReadConformPDB reading from PDB file servers/FAMS_TS5.pdb.gz looking for model 1
# Found a chain break before 246
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS5
# ReadConformPDB reading from PDB file servers/FOLDpro_TS1.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS1
# ReadConformPDB reading from PDB file servers/FOLDpro_TS2.pdb.gz looking for model 1
# Found a chain break before 213
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS2
# ReadConformPDB reading from PDB file servers/FOLDpro_TS3.pdb.gz looking for model 1
# Found a chain break before 229
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS3
# ReadConformPDB reading from PDB file servers/FOLDpro_TS4.pdb.gz looking for model 1
# Found a chain break before 206
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS4
# ReadConformPDB reading from PDB file servers/FOLDpro_TS5.pdb.gz looking for model 1
# Found a chain break before 176
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS5
# ReadConformPDB reading from PDB file servers/FORTE1_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL1
# ReadConformPDB reading from PDB file servers/FORTE1_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FORTE1_AL2
# ReadConformPDB reading from PDB file servers/FORTE1_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL3
# ReadConformPDB reading from PDB file servers/FORTE1_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL4
# ReadConformPDB reading from PDB file servers/FORTE1_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FORTE1_AL5
# ReadConformPDB reading from PDB file servers/FORTE2_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL1
# ReadConformPDB reading from PDB file servers/FORTE2_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FORTE2_AL2
# ReadConformPDB reading from PDB file servers/FORTE2_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL3
# ReadConformPDB reading from PDB file servers/FORTE2_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL4
# ReadConformPDB reading from PDB file servers/FORTE2_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL5
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS1.pdb.gz looking for model 1
# Found a chain break before 246
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS1
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS2.pdb.gz looking for model 1
# Found a chain break before 165
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS2
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS3.pdb.gz looking for model 1
# Found a chain break before 219
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS3
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS4.pdb.gz looking for model 1
# Found a chain break before 240
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS4
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS5.pdb.gz looking for model 1
# Found a chain break before 237
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS5
# ReadConformPDB reading from PDB file servers/FUGMOD_TS1.pdb.gz looking for model 1
# Found a chain break before 212
# copying to AlignedFragments data structure
# naming current conformation FUGMOD_TS1
# ReadConformPDB reading from PDB file servers/FUGMOD_TS2.pdb.gz looking for model 1
# Found a chain break before 91
# copying to AlignedFragments data structure
# naming current conformation FUGMOD_TS2
# ReadConformPDB reading from PDB file servers/FUGMOD_TS3.pdb.gz looking for model 1
# Found a chain break before 213
# copying to AlignedFragments data structure
# naming current conformation FUGMOD_TS3
# ReadConformPDB reading from PDB file servers/FUGMOD_TS4.pdb.gz looking for model 1
# Found a chain break before 197
# copying to AlignedFragments data structure
# naming current conformation FUGMOD_TS4
# ReadConformPDB reading from PDB file servers/FUGMOD_TS5.pdb.gz looking for model 1
# Found a chain break before 217
# copying to AlignedFragments data structure
# naming current conformation FUGMOD_TS5
# ReadConformPDB reading from PDB file servers/FUGUE_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FUGUE_AL1
# ReadConformPDB reading from PDB file servers/FUGUE_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL2
# ReadConformPDB reading from PDB file servers/FUGUE_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL3
# ReadConformPDB reading from PDB file servers/FUGUE_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL4
# ReadConformPDB reading from PDB file servers/FUGUE_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL5
# ReadConformPDB reading from PDB file servers/FUNCTION_TS1.pdb.gz looking for model 1
# Found a chain break before 255
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS1
# ReadConformPDB reading from PDB file servers/FUNCTION_TS2.pdb.gz looking for model 1
# Found a chain break before 246
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS2
# ReadConformPDB reading from PDB file servers/FUNCTION_TS3.pdb.gz looking for model 1
# Found a chain break before 256
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS3
# ReadConformPDB reading from PDB file servers/FUNCTION_TS4.pdb.gz looking for model 1
# Found a chain break before 222
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS4
# ReadConformPDB reading from PDB file servers/FUNCTION_TS5.pdb.gz looking for model 1
# Found a chain break before 205
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS5
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS1.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS1
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS2.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS2
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS3.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS3
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS4.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS4
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS5.pdb.gz looking for model 1
# Found a chain break before 235
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS5
# ReadConformPDB reading from PDB file servers/HHpred1_TS1.pdb.gz looking for model 1
# Found a chain break before 132
# copying to AlignedFragments data structure
# naming current conformation HHpred1_TS1
# ReadConformPDB reading from PDB file servers/HHpred2_TS1.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation HHpred2_TS1
# ReadConformPDB reading from PDB file servers/HHpred3_TS1.pdb.gz looking for model 1
# Found a chain break before 212
# copying to AlignedFragments data structure
# naming current conformation HHpred3_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Huber-Torda-Server_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Huber-Torda-Server_TS2
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS3
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS4
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS5
# ReadConformPDB reading from PDB file servers/LOOPP_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS1
# ReadConformPDB reading from PDB file servers/LOOPP_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation LOOPP_TS2
# ReadConformPDB reading from PDB file servers/LOOPP_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation LOOPP_TS3
# ReadConformPDB reading from PDB file servers/LOOPP_TS4.pdb.gz looking for model 1
# Found a chain break before 62
# copying to AlignedFragments data structure
# naming current conformation LOOPP_TS4
# ReadConformPDB reading from PDB file servers/LOOPP_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS5
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS1.pdb.gz looking for model 1
# Found a chain break before 198
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS1
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS2.pdb.gz looking for model 1
# Found a chain break before 235
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS2
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS3.pdb.gz looking for model 1
# Found a chain break before 131
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS3
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS4.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS4
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS5.pdb.gz looking for model 1
# Found a chain break before 252
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS5
# ReadConformPDB reading from PDB file servers/MetaTasser_TS1.pdb.gz looking for model 1
# Found a chain break before 256
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS1
# ReadConformPDB reading from PDB file servers/MetaTasser_TS2.pdb.gz looking for model 1
# Found a chain break before 244
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS2
# ReadConformPDB reading from PDB file servers/MetaTasser_TS3.pdb.gz looking for model 1
# Found a chain break before 252
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS3
# ReadConformPDB reading from PDB file servers/NN_PUT_lab_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation NN_PUT_lab_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS1.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS2.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS3.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS4.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS5.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS5
# ReadConformPDB reading from PDB file servers/PROTINFO_TS1.pdb.gz looking for model 1
# naming current conformation PROTINFO_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO_TS2.pdb.gz looking for model 1
# Found a chain break before 169
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO_TS3.pdb.gz looking for model 1
# Found a chain break before 91
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO_TS4.pdb.gz looking for model 1
# naming current conformation PROTINFO_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO_TS5.pdb.gz looking for model 1
# Found a chain break before 255
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS5
# ReadConformPDB reading from PDB file servers/Pcons6_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS1
# ReadConformPDB reading from PDB file servers/Pcons6_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS2
# ReadConformPDB reading from PDB file servers/Pcons6_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Pcons6_TS3
# ReadConformPDB reading from PDB file servers/Pcons6_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS4
# ReadConformPDB reading from PDB file servers/Pcons6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS5
# ReadConformPDB reading from PDB file servers/Phyre-1_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Phyre-1_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS1.pdb.gz looking for model 1
# Found a chain break before 208
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS2.pdb.gz looking for model 1
# Found a chain break before 208
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS2
# ReadConformPDB reading from PDB file servers/Phyre-2_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS3
# ReadConformPDB reading from PDB file servers/Phyre-2_TS4.pdb.gz looking for model 1
# Found a chain break before 254
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS4
# ReadConformPDB reading from PDB file servers/Phyre-2_TS5.pdb.gz looking for model 1
# Found a chain break before 208
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS5
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS1.pdb.gz looking for model 1
# Found a chain break before 170
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS1
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS2
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS3
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS4.pdb.gz looking for model 1
# Found a chain break before 167
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS4
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS1.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS2.pdb.gz looking for model 1
# Found a chain break before 254
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS3.pdb.gz looking for model 1
# Found a chain break before 235
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS4.pdb.gz looking for model 1
# Found a chain break before 132
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS5.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS5
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS1.pdb.gz looking for model 1
# Found a chain break before 90
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS1
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS2.pdb.gz looking for model 1
# Found a chain break before 209
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS2
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS3.pdb.gz looking for model 1
# Found a chain break before 84
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS3
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS4.pdb.gz looking for model 1
# Found a chain break before 90
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS4
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS5.pdb.gz looking for model 1
# Found a chain break before 84
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR_TS1.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR_TS2.pdb.gz looking for model 1
# Found a chain break before 206
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR_TS3.pdb.gz looking for model 1
# Found a chain break before 133
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR_TS4.pdb.gz looking for model 1
# Found a chain break before 253
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR_TS5.pdb.gz looking for model 1
# Found a chain break before 253
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS5
# ReadConformPDB reading from PDB file servers/ROBETTA_TS1.pdb.gz looking for model 1
# Found a chain break before 167
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS1
# ReadConformPDB reading from PDB file servers/ROBETTA_TS2.pdb.gz looking for model 1
# Found a chain break before 167
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS2
# ReadConformPDB reading from PDB file servers/ROBETTA_TS3.pdb.gz looking for model 1
# Found a chain break before 91
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS3
# ReadConformPDB reading from PDB file servers/ROBETTA_TS4.pdb.gz looking for model 1
# Found a chain break before 91
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS4
# ReadConformPDB reading from PDB file servers/ROBETTA_TS5.pdb.gz looking for model 1
# Found a chain break before 170
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS5
# ReadConformPDB reading from PDB file servers/ROKKY_TS1.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS1
# ReadConformPDB reading from PDB file servers/ROKKY_TS2.pdb.gz looking for model 1
# Found a chain break before 212
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS2
# ReadConformPDB reading from PDB file servers/ROKKY_TS3.pdb.gz looking for model 1
# Found a chain break before 235
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS3
# ReadConformPDB reading from PDB file servers/ROKKY_TS4.pdb.gz looking for model 1
# Found a chain break before 185
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS4
# ReadConformPDB reading from PDB file servers/ROKKY_TS5.pdb.gz looking for model 1
# Found a chain break before 176
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS5
# ReadConformPDB reading from PDB file servers/SAM-T02_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL1
# ReadConformPDB reading from PDB file servers/SAM-T02_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM-T02_AL2
# ReadConformPDB reading from PDB file servers/SAM-T02_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL3
# ReadConformPDB reading from PDB file servers/SAM-T02_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM-T02_AL4
# ReadConformPDB reading from PDB file servers/SAM-T02_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL5
# ReadConformPDB reading from PDB file servers/SAM-T99_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL1
# ReadConformPDB reading from PDB file servers/SAM-T99_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM-T99_AL2
# ReadConformPDB reading from PDB file servers/SAM-T99_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM-T99_AL3
# ReadConformPDB reading from PDB file servers/SAM-T99_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL4
# ReadConformPDB reading from PDB file servers/SAM-T99_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM-T99_AL5
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS1.pdb.gz looking for model 1
# Found a chain break before 251
# copying to AlignedFragments data structure
# naming current conformation SAM_T06_server_TS1
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS2
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM_T06_server_TS3
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM_T06_server_TS4
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS5
# ReadConformPDB reading from PDB file servers/SP3_TS1.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation SP3_TS1
# ReadConformPDB reading from PDB file servers/SP3_TS2.pdb.gz looking for model 1
# Found a chain break before 235
# copying to AlignedFragments data structure
# naming current conformation SP3_TS2
# ReadConformPDB reading from PDB file servers/SP3_TS3.pdb.gz looking for model 1
# Found a chain break before 131
# copying to AlignedFragments data structure
# naming current conformation SP3_TS3
# ReadConformPDB reading from PDB file servers/SP3_TS4.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation SP3_TS4
# ReadConformPDB reading from PDB file servers/SP3_TS5.pdb.gz looking for model 1
# Found a chain break before 91
# copying to AlignedFragments data structure
# naming current conformation SP3_TS5
# ReadConformPDB reading from PDB file servers/SP4_TS1.pdb.gz looking for model 1
# Found a chain break before 235
# copying to AlignedFragments data structure
# naming current conformation SP4_TS1
# ReadConformPDB reading from PDB file servers/SP4_TS2.pdb.gz looking for model 1
# Found a chain break before 253
# copying to AlignedFragments data structure
# naming current conformation SP4_TS2
# ReadConformPDB reading from PDB file servers/SP4_TS3.pdb.gz looking for model 1
# Found a chain break before 212
# copying to AlignedFragments data structure
# naming current conformation SP4_TS3
# ReadConformPDB reading from PDB file servers/SP4_TS4.pdb.gz looking for model 1
# Found a chain break before 149
# copying to AlignedFragments data structure
# naming current conformation SP4_TS4
# ReadConformPDB reading from PDB file servers/SP4_TS5.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation SP4_TS5
# ReadConformPDB reading from PDB file servers/SPARKS2_TS1.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS1
# ReadConformPDB reading from PDB file servers/SPARKS2_TS2.pdb.gz looking for model 1
# Found a chain break before 235
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS2
# ReadConformPDB reading from PDB file servers/SPARKS2_TS3.pdb.gz looking for model 1
# Found a chain break before 131
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS3
# ReadConformPDB reading from PDB file servers/SPARKS2_TS4.pdb.gz looking for model 1
# Found a chain break before 183
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS4
# ReadConformPDB reading from PDB file servers/SPARKS2_TS5.pdb.gz looking for model 1
# Found a chain break before 207
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS5
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation UNI-EID_bnmx_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS2
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation UNI-EID_bnmx_TS3
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation UNI-EID_bnmx_TS4
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS5
# ReadConformPDB reading from PDB file servers/UNI-EID_expm_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation UNI-EID_expm_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation UNI-EID_sfst_AL1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL2
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation UNI-EID_sfst_AL3
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation UNI-EID_sfst_AL4
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL5
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS1.pdb.gz looking for model 1
# Found a chain break before 168
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS1
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS2.pdb.gz looking for model 1
# Found a chain break before 90
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS2
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS3.pdb.gz looking for model 1
# Found a chain break before 145
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS3
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS4.pdb.gz looking for model 1
# Found a chain break before 147
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS4
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS5.pdb.gz looking for model 1
# Found a chain break before 253
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS5
# ReadConformPDB reading from PDB file servers/beautshot_TS1.pdb.gz looking for model 1
# Found a chain break before 255
# copying to AlignedFragments data structure
# naming current conformation beautshot_TS1
# ReadConformPDB reading from PDB file servers/beautshotbase_TS1.pdb.gz looking for model 1
# Found a chain break before 254
# copying to AlignedFragments data structure
# naming current conformation beautshotbase_TS1
# ReadConformPDB reading from PDB file servers/forecast-s_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation forecast-s_AL1
# ReadConformPDB reading from PDB file servers/forecast-s_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation forecast-s_AL2
# ReadConformPDB reading from PDB file servers/forecast-s_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL3
# ReadConformPDB reading from PDB file servers/forecast-s_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL4
# ReadConformPDB reading from PDB file servers/forecast-s_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL5
# ReadConformPDB reading from PDB file servers/gtg_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation gtg_AL1
# ReadConformPDB reading from PDB file servers/gtg_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation gtg_AL2
# ReadConformPDB reading from PDB file servers/gtg_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation gtg_AL3
# ReadConformPDB reading from PDB file servers/gtg_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation gtg_AL4
# ReadConformPDB reading from PDB file servers/gtg_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation gtg_AL5
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS1.pdb.gz looking for model 1
# Found a chain break before 253
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS2.pdb.gz looking for model 1
# Found a chain break before 253
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS3.pdb.gz looking for model 1
# Found a chain break before 254
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS4.pdb.gz looking for model 1
# Found a chain break before 215
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS5.pdb.gz looking for model 1
# Found a chain break before 128
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS5
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS1.pdb.gz looking for model 1
# Found a chain break before 254
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS2.pdb.gz looking for model 1
WARNING: atoms too close: (T0315)R32.O and (T0315)M33.N only 0 apart, marking (T0315)M33.N as missing
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS3.pdb.gz looking for model 1
# Found a chain break before 254
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS4.pdb.gz looking for model 1
# Found a chain break before 256
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS5.pdb.gz looking for model 1
# Found a chain break before 254
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS5
# ReadConformPDB reading from PDB file servers/karypis.srv_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv_TS2.pdb.gz looking for model 1
# Found a chain break before 206
# copying to AlignedFragments data structure
# naming current conformation karypis.srv_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv_TS5.pdb.gz looking for model 1
# Found a chain break before 250
# copying to AlignedFragments data structure
# naming current conformation karypis.srv_TS5
# ReadConformPDB reading from PDB file servers/keasar-server_TS1.pdb.gz looking for model 1
# Found a chain break before 197
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS1
# ReadConformPDB reading from PDB file servers/keasar-server_TS2.pdb.gz looking for model 1
# Found a chain break before 210
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS2
# ReadConformPDB reading from PDB file servers/keasar-server_TS3.pdb.gz looking for model 1
# Found a chain break before 211
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS3
# ReadConformPDB reading from PDB file servers/keasar-server_TS4.pdb.gz looking for model 1
# Found a chain break before 210
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS4
# ReadConformPDB reading from PDB file servers/keasar-server_TS5.pdb.gz looking for model 1
# Found a chain break before 210
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS5
# ReadConformPDB reading from PDB file servers/mGen-3D_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation mGen-3D_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation nFOLD_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation nFOLD_TS2
# ReadConformPDB reading from PDB file servers/nFOLD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation nFOLD_TS3
# ReadConformPDB reading from PDB file servers/nFOLD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS4
# ReadConformPDB reading from PDB file servers/nFOLD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation nFOLD_TS5
# ReadConformPDB reading from PDB file servers/panther2_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0315 can't currently be optimized by undertaker
# naming current conformation panther2_TS1
# ReadConformPDB reading from PDB file servers/shub_TS1.pdb.gz looking for model 1
# Found a chain break before 254
# copying to AlignedFragments data structure
# naming current conformation shub_TS1
# command:Using radius: 8.0000
Metaserver mode
NUMB_ALIGNS: 255
model score -0.2313
model score -0.2321
model score -0.2776
model score -0.1962
model score -0.2779
model score -0.2558
model score -0.2868
model score -0.2554
model score -0.2608
model score -0.2288
model score -0.2081
model score -0.2082
model score -0.2463
model score -0.2857
model score -0.3422
model score -0.3423
model score 1.0891
model score 0.1469
model score 0.9210
model score 1.4015
model score 1.3156
model score 1.3580
model score 1.2341
model score 1.2523
model score -0.3486
model score -0.3044
model score -0.2737
model score -0.2978
model score -0.2969
model score -0.3016
model score -0.2741
model score -0.2637
model score -0.2459
model score -0.2872
model score -0.2363
model score -0.2754
model score -0.3089
model score -0.2251
model score -0.2507
model score -0.2919
model score 0.4321
model score 1.2645
model score 1.2648
model score 1.2698
model score 1.2639
model score 1.2662
model score -0.2939
model score -0.2473
model score -0.2991
model score -0.2837
model score -0.2916
model score -0.3165
model score -0.2741
model score -0.2872
model score -0.2473
model score -0.2863
model score -0.3417
model score -0.3452
model score 0.1330
model score -0.1390
model score -0.2874
model score 1.2776
model score 1.2648
model score 1.2806
model score 1.2659
model score 1.2891
model score 1.2776
model score 1.2648
model score 1.2659
model score 1.2815
model score 1.2744
model score 2.6197
model score 2.5150
model score 2.4034
model score 2.3302
model score 2.5725
model score -0.2942
model score 0.4348
model score 0.8763
model score 1.6630
model score 0.8605
model score 1.2648
model score 1.2665
model score 1.2741
model score 1.2832
model score 1.2806
model score -0.2938
model score -0.2863
model score -0.2899
model score -0.2379
model score -0.2908
model score -0.3130
model score -0.2932
model score -0.3093
model score -0.3062
model score -0.2984
model score -0.2906
model score -0.3356
model score -0.3452
model score -0.2766
model score -0.2426
model score 0.1404
model score -0.2383
model score 1.1173
model score -0.1335
model score -0.1994
model score -0.1966
model score -0.3000
model score 0.3607
model score -0.3061
model score -0.2795
model score -0.3123
model score -0.3169
model score -0.1019
model score -0.3212
model score 0.5843
model score 0.6917
model score -0.1335
model score -0.3010
model score -0.2993
model score -0.3018
model score -0.3008
model score -0.2960
model score -0.2993
model score -0.2983
model score -0.3050
model score -0.3010
model score -0.2957
model score -0.2701
model score -0.2768
model score -0.2125
model score -0.2679
model score -0.2701
model score -0.2963
model score -0.1383
model score -0.1363
model score -0.1046
model score -0.2910
model score -0.2603
model score -0.3024
model score -0.2534
model score -0.1655
model score -0.3126
model score -0.2723
model score -0.2860
model score -0.3080
model score -0.2977
model score -0.2911
model score -0.2915
model score -0.3087
model score -0.1878
model score 0.3064
model score -0.3027
model score -0.3120
model score -0.3068
model score -0.1963
model score 0.2764
model score -0.3065
model score -0.3041
model score -0.3126
model score -0.3028
model score -0.2956
model score -0.3113
model score -0.3024
model score -0.3105
model score -0.3123
model score -0.2909
model score -0.3043
model score 0.7065
model score 1.2648
model score 1.2656
model score 1.2647
model score 1.2655
model score 1.2730
model score 1.2648
model score 1.2656
model score 1.2658
model score 1.2655
model score 1.2647
model score -0.2609
model score -0.2375
model score -0.1662
model score -0.0590
model score -0.2347
model score -0.2915
model score -0.3007
model score -0.2997
model score -0.3237
model score -0.0133
model score -0.2952
model score -0.2967
model score -0.3111
model score -0.3015
model score -0.0105
model score -0.2915
model score -0.2989
model score -0.2997
model score -0.3237
model score 0.0427
model score 1.2655
model score 1.2648
model score 1.2647
model score 1.2656
model score 1.2659
model score -0.2747
model score 1.2655
model score 1.2648
model score 1.2647
model score 1.2656
model score 1.2659
model score -0.3345
model score -0.3238
model score -0.3282
model score -0.3372
model score -0.3121
model score -0.3106
model score -0.2952
model score 1.2648
model score 1.2761
model score 1.2659
model score 1.2837
model score 1.2789
model score 1.2648
model score 1.2655
model score 1.2656
model score 1.2647
model score 1.2723
model score -0.3087
model score -0.3081
model score -0.3063
model score 0.0857
model score 0.1865
model score 2.4375
model score 2.0261
model score 2.0079
model score 2.2357
model score 1.9943
model score 0.0172
model score 0.1757
model score 0.1891
model score 0.3013
model score 1.0709
model score -0.2596
model score -0.2646
model score -0.2653
model score -0.2653
model score -0.2669
model score -0.2417
model score -0.2956
model score -0.2418
model score -0.2785
model score 0.2224
model score 0.2331
model score -0.2371
model score -0.3026
weight: 0.9644 eval: -0.2313 min: -0.3486 max: 2.6197
weight: 0.9647 eval: -0.2321 min: -0.3486 max: 2.6197
weight: 0.9785 eval: -0.2776 min: -0.3486 max: 2.6197
weight: 0.9538 eval: -0.1962 min: -0.3486 max: 2.6197
weight: 0.9786 eval: -0.2779 min: -0.3486 max: 2.6197
weight: 0.9719 eval: -0.2558 min: -0.3486 max: 2.6197
weight: 0.9813 eval: -0.2868 min: -0.3486 max: 2.6197
weight: 0.9718 eval: -0.2554 min: -0.3486 max: 2.6197
weight: 0.9734 eval: -0.2608 min: -0.3486 max: 2.6197
weight: 0.9637 eval: -0.2288 min: -0.3486 max: 2.6197
weight: 0.9574 eval: -0.2081 min: -0.3486 max: 2.6197
weight: 0.9574 eval: -0.2082 min: -0.3486 max: 2.6197
weight: 0.9690 eval: -0.2463 min: -0.3486 max: 2.6197
weight: 0.9809 eval: -0.2857 min: -0.3486 max: 2.6197
weight: 0.9981 eval: -0.3422 min: -0.3486 max: 2.6197
weight: 0.9981 eval: -0.3423 min: -0.3486 max: 2.6197
weight: 0.5641 eval: 1.0891 min: -0.3486 max: 2.6197
weight: 0.8498 eval: 0.1469 min: -0.3486 max: 2.6197
weight: 0.6151 eval: 0.9210 min: -0.3486 max: 2.6197
weight: 0.4694 eval: 1.4015 min: -0.3486 max: 2.6197
weight: 0.4954 eval: 1.3156 min: -0.3486 max: 2.6197
weight: 0.4825 eval: 1.3580 min: -0.3486 max: 2.6197
weight: 0.5201 eval: 1.2341 min: -0.3486 max: 2.6197
weight: 0.5146 eval: 1.2523 min: -0.3486 max: 2.6197
weight: 1.0000 eval: -0.3486 min: -0.3486 max: 2.6197
weight: 0.9866 eval: -0.3044 min: -0.3486 max: 2.6197
weight: 0.9773 eval: -0.2737 min: -0.3486 max: 2.6197
weight: 0.9846 eval: -0.2978 min: -0.3486 max: 2.6197
weight: 0.9843 eval: -0.2969 min: -0.3486 max: 2.6197
weight: 0.9857 eval: -0.3016 min: -0.3486 max: 2.6197
weight: 0.9774 eval: -0.2741 min: -0.3486 max: 2.6197
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Adding 7576 constraints to all2.constraints
Done adding distance constraints
# command:Reading probabilities from probabilities.dat
Reading constraints from ConstraintSet all2.constraints
maxweight: 1.0000
Optimizing...
 Probability sum: -397.6113, CN propb: -397.6113 weights: 0.4787 constraints: 860
# command:Found ConstraintSet
# PrintContacts align.constraints_meta02
Number of constraints in align2.constraints 860
# command:Found ConstraintSet
# PrintContacts align_bonus.constraints_meta02
Number of constraints in align2.constraints.bonus 860
# command:Found ConstraintSet
# PrintContacts rejected.constraints_meta02
Number of constraints in rejected2.constraints 6716
# command:Found ConstraintSet
# PrintContacts rejected_bonus.constraints_meta02
Number of constraints in rejected2.constraints.bonus 6716
# command:Found ConstraintSet
# PrintContacts non_contacts.constraints_meta02
Number of constraints in noncontact2.constraints 0
# command:Found ConstraintSet
# PrintContacts non_contacts_bonus.constraints_meta02
Number of constraints in noncontact2.constraints.bonus 0
# command:Found ConstraintSet
# PrintContacts all.constraints_meta02
Number of constraints in all2.constraints 7576
# command: