# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/ # command:# reading dunbrack-2191.atoms # #computed average backbone with maximum peptide_sq_deviance = 0.002 # computed average trans backbone unit from 53157 examples # computed average trans backbone unit before proline from 2010 examples # computed average cis backbone unit from 97 examples # trans (non-proline) backbone unit: # CA= -2.2087 1.0126 -0.0030 # O= -0.1499 2.2440 0.0016 # C= -0.6889 1.1368 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4581 -0.0000 0.0000 # cis backbone unit: # CA= -0.1436 2.4534 -0.0002 # O= -2.0284 0.9742 0.0015 # C= -0.8018 1.0771 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4668 0.0000 0.0000 # trans backbone unit before proline: # CA= -2.2100 1.0631 -0.0014 # O= -0.1236 2.2458 0.0075 # C= -0.6872 1.1517 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4660 0.0000 0.0000 # After reading dunbrack-2191.atoms have 2191 chains in training database # Count of chains,residues,atoms: 2191,500310,3902258 # 493341 residues have no bad marker # 3226 residues lack atoms needed to compute omega # 1453 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 4 # HAS_OXT 1167 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 3052 # HAS_UNKNOWN_ATOMS 9 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 979 # NON_PLANAR_PEPTIDE 888 # BAD_PEPTIDE 2680 # Note: may sum to more than number of residues, # because one residue may have multiple problems # command:# Reading rotamer library from dunbrack-2191.rot # command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/ # command:# ReadAtomType exp-pdb.types Read AtomType exp-pdb with 49 types. # command:# ReadClashTable exp-pdb-2191-2symm.clash # Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2 # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0312/ # command:# Making conformation for sequence T0312 numbered 1 through 146 Created new target T0312 from T0312.a2m # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0312/ # command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0312//projects/compbio/experiments/protein-predict/casp7/T0312/align.constraints_v3.costfcn or /projects/compbio/experiments/protein-predict/casp7/T0312//projects/compbio/experiments/protein-predict/casp7/T0312/align.constraints_v3.costfcn.gz for input Trying /projects/compbio/experiments/protein-predict/casp7/T0312/align.constraints_v3.costfcn # reading script from file /projects/compbio/experiments/protein-predict/casp7/T0312/align.constraints_v3.costfcn # future Constraint commands -> align # future HelixConstraint commands -> align # future StrandConstraint commands -> align # future SheetConstraint commands -> align # future Hbond commands -> align # future SSbond commands -> align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)I40.CB) [> 3.6929 = 6.1548 < 8.0013] w=1.0000 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)S76.CB) [> 3.4573 = 5.7621 < 7.4908] w=0.7386 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)S76.CB) [> 4.3100 = 7.1833 < 9.3383] w=0.7386 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)L75.CB) [> 4.3320 = 7.2200 < 9.3860] w=0.7192 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)Q25.CB) [> 3.3847 = 5.6412 < 7.3336] w=0.6684 to align # Constraint # added constraint: constraint((T0312)V79.CB, (T0312)H89.CB) [> 3.9910 = 6.6517 < 8.6472] w=0.6556 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)S74.CB) [> 3.9877 = 6.6462 < 8.6401] w=0.6249 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)G102.CA) [> 3.6476 = 6.0793 < 7.9031] w=0.5761 to align # Constraint # added constraint: constraint((T0312)L16.CB, (T0312)Q25.CB) [> 2.9906 = 4.9844 < 6.4798] w=0.5727 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)F29.CB) [> 3.6660 = 6.1100 < 7.9429] w=0.5727 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)L75.CB) [> 3.7293 = 6.2155 < 8.0801] w=0.5536 to align # Constraint # added constraint: constraint((T0312)Y53.CB, (T0312)L70.CB) [> 3.9773 = 6.6289 < 8.6175] w=0.5471 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)S74.CB) [> 4.0182 = 6.6970 < 8.7061] w=0.5437 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)L73.CB) [> 4.2820 = 7.1366 < 9.2776] w=0.5361 to align # Constraint # added constraint: constraint((T0312)L30.CB, (T0312)I40.CB) [> 3.9797 = 6.6328 < 8.6227] w=0.5218 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)S74.CB) [> 3.8604 = 6.4339 < 8.3641] w=0.5190 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)V92.CB) [> 4.0491 = 6.7485 < 8.7731] w=0.5078 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)G102.CA) [> 3.7226 = 6.2043 < 8.0657] w=0.5063 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)V92.CB) [> 3.5673 = 5.9455 < 7.7291] w=0.5042 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)G77.CA) [> 3.7941 = 6.3234 < 8.2205] w=0.5021 to align # Constraint # added constraint: constraint((T0312)N78.CB, (T0312)I90.CB) [> 4.3482 = 7.2470 < 9.4211] w=0.5021 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)H91.CB) [> 3.4518 = 5.7530 < 7.4789] w=0.4982 to align # Constraint # added constraint: constraint((T0312)Y53.CB, (T0312)E71.CB) [> 4.2237 = 7.0395 < 9.1514] w=0.4976 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)A38.CB) [> 3.8401 = 6.4001 < 8.3202] w=0.4921 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)A38.CB) [> 4.5318 = 7.5530 < 9.8189] w=0.4906 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)V62.CB) [> 3.7248 = 6.2080 < 8.0704] w=0.4901 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)K63.CB) [> 4.1538 = 6.9229 < 8.9998] w=0.4901 to align # Constraint # added constraint: constraint((T0312)N78.CB, (T0312)H89.CB) [> 3.6601 = 6.1002 < 7.9302] w=0.4821 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)G102.CA) [> 4.0423 = 6.7371 < 8.7583] w=0.4802 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)K63.CB) [> 3.7248 = 6.2081 < 8.0705] w=0.4760 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)G95.CA) [> 3.1163 = 5.1938 < 6.7520] w=0.4747 to align # Constraint # added constraint: constraint((T0312)Y53.CB, (T0312)K64.CB) [> 3.7553 = 6.2588 < 8.1364] w=0.4686 to align # Constraint # added constraint: constraint((T0312)Y53.CB, (T0312)V62.CB) [> 3.0939 = 5.1565 < 6.7034] w=0.4680 to align # Constraint # added constraint: constraint((T0312)S80.CB, (T0312)H89.CB) [> 3.7262 = 6.2103 < 8.0734] w=0.4617 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)G95.CA) [> 3.8732 = 6.4553 < 8.3919] w=0.4601 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)E71.CB) [> 3.4196 = 5.6993 < 7.4091] w=0.4559 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)L70.CB) [> 2.9883 = 4.9806 < 6.4747] w=0.4559 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)L93.CB) [> 3.5635 = 5.9391 < 7.7208] w=0.4548 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)I90.CB) [> 3.8128 = 6.3546 < 8.2610] w=0.4546 to align # Constraint # added constraint: constraint((T0312)Y54.CB, (T0312)L70.CB) [> 3.9062 = 6.5104 < 8.4635] w=0.4514 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)S76.CB) [> 3.3024 = 5.5041 < 7.1553] w=0.4514 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)L73.CB) [> 4.2111 = 7.0185 < 9.1241] w=0.4485 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)L94.CB) [> 3.2758 = 5.4596 < 7.0975] w=0.4475 to align # Constraint # added constraint: constraint((T0312)R15.CB, (T0312)A38.CB) [> 4.4187 = 7.3645 < 9.5739] w=0.4451 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)L75.CB) [> 2.9730 = 4.9549 < 6.4414] w=0.4384 to align # Constraint # added constraint: constraint((T0312)E27.CB, (T0312)A37.CB) [> 3.2246 = 5.3743 < 6.9866] w=0.4373 to align # Constraint # added constraint: constraint((T0312)V23.CB, (T0312)H39.CB) [> 3.9567 = 6.5945 < 8.5729] w=0.4373 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)L66.CB) [> 4.2762 = 7.1269 < 9.2650] w=0.4371 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)E65.CB) [> 3.4110 = 5.6850 < 7.3905] w=0.4371 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)G103.CA) [> 3.4666 = 5.7777 < 7.5110] w=0.4361 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)H104.CB) [> 4.2180 = 7.0299 < 9.1389] w=0.4320 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)L70.CB) [> 3.5282 = 5.8803 < 7.6444] w=0.4290 to align # Constraint # added constraint: constraint((T0312)I35.CB, (T0312)S48.CB) [> 4.4069 = 7.3449 < 9.5484] w=0.4208 to align # Constraint # added constraint: constraint((T0312)L30.CB, (T0312)A49.CB) [> 4.5178 = 7.5297 < 9.7887] w=0.4208 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)L105.CB) [> 3.4242 = 5.7069 < 7.4190] w=0.4207 to align # Constraint # added constraint: constraint((T0312)G44.CA, (T0312)L73.CB) [> 4.1580 = 6.9300 < 9.0090] w=0.4202 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)V115.CB) [> 4.4960 = 7.4933 < 9.7412] w=0.4202 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)H89.CB) [> 3.9879 = 6.6465 < 8.6405] w=0.4179 to align # Constraint # added constraint: constraint((T0312)V79.CB, (T0312)C88.CB) [> 3.5084 = 5.8473 < 7.6015] w=0.4171 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)S76.CB) [> 3.6638 = 6.1063 < 7.9382] w=0.4166 to align # Constraint # added constraint: constraint((T0312)S48.CB, (T0312)L66.CB) [> 4.1668 = 6.9447 < 9.0281] w=0.4021 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)I72.CB) [> 4.5331 = 7.5552 < 9.8218] w=0.4019 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)A49.CB) [> 3.8093 = 6.3488 < 8.2534] w=0.4009 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)S48.CB) [> 2.4579 = 4.0965 < 5.3255] w=0.4009 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)L73.CB) [> 4.1149 = 6.8582 < 8.9156] w=0.3997 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)I26.CB) [> 4.1961 = 6.9935 < 9.0916] w=0.3989 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)L66.CB) [> 2.8142 = 4.6904 < 6.0975] w=0.3971 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)E65.CB) [> 4.2661 = 7.1102 < 9.2432] w=0.3971 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)I51.CB) [> 4.3156 = 7.1926 < 9.3504] w=0.3966 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)A38.CB) [> 3.7351 = 6.2251 < 8.0927] w=0.3827 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)A37.CB) [> 3.2168 = 5.3614 < 6.9698] w=0.3827 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)S74.CB) [> 2.8818 = 4.8029 < 6.2438] w=0.3820 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)G103.CA) [> 3.6386 = 6.0642 < 7.8835] w=0.3792 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)L93.CB) [> 4.0653 = 6.7755 < 8.8082] w=0.3789 to align # Constraint # added constraint: constraint((T0312)V79.CB, (T0312)I90.CB) [> 3.5527 = 5.9212 < 7.6976] w=0.3763 to align # Constraint # added constraint: constraint((T0312)N78.CB, (T0312)H91.CB) [> 3.0988 = 5.1646 < 6.7140] w=0.3720 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)G77.CA) [> 3.7581 = 6.2635 < 8.1426] w=0.3692 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)I90.CB) [> 4.2610 = 7.1017 < 9.2323] w=0.3631 to align # Constraint # added constraint: constraint((T0312)N78.CB, (T0312)C88.CB) [> 4.3368 = 7.2280 < 9.3964] w=0.3625 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)V115.CB) [> 4.0005 = 6.6675 < 8.6677] w=0.3611 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)V115.CB) [> 4.4823 = 7.4705 < 9.7117] w=0.3611 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)V92.CB) [> 3.1143 = 5.1904 < 6.7476] w=0.3602 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)L94.CB) [> 4.0770 = 6.7949 < 8.8334] w=0.3602 to align # Constraint # added constraint: constraint((T0312)L30.CB, (T0312)S76.CB) [> 3.3015 = 5.5026 < 7.1534] w=0.3602 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)I72.CB) [> 4.1617 = 6.9362 < 9.0171] w=0.3602 to align # Constraint # added constraint: constraint((T0312)R15.CB, (T0312)H39.CB) [> 3.4790 = 5.7984 < 7.5379] w=0.3592 to align # Constraint # added constraint: constraint((T0312)R15.CB, (T0312)A37.CB) [> 3.6602 = 6.1004 < 7.9305] w=0.3592 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)H39.CB) [> 4.2873 = 7.1455 < 9.2892] w=0.3592 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)A38.CB) [> 2.9906 = 4.9842 < 6.4795] w=0.3592 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)A37.CB) [> 4.5462 = 7.5770 < 9.8501] w=0.3592 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)H36.CB) [> 4.1112 = 6.8520 < 8.9076] w=0.3592 to align # Constraint # added constraint: constraint((T0312)E71.CB, (T0312)K96.CB) [> 3.8561 = 6.4268 < 8.3548] w=0.3579 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)C88.CB) [> 4.1073 = 6.8456 < 8.8993] w=0.3574 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)N78.CB) [> 3.6869 = 6.1448 < 7.9883] w=0.3569 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)N78.CB) [> 3.9397 = 6.5662 < 8.5361] w=0.3569 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)N78.CB) [> 3.8952 = 6.4920 < 8.4396] w=0.3569 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)A42.CB) [> 4.3316 = 7.2193 < 9.3851] w=0.3569 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)L105.CB) [> 2.9353 = 4.8922 < 6.3598] w=0.3547 to align # Constraint # added constraint: constraint((T0312)G44.CA, (T0312)S74.CB) [> 4.1635 = 6.9391 < 9.0209] w=0.3537 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)S76.CB) [> 4.5314 = 7.5523 < 9.8180] w=0.3485 to align # Constraint # added constraint: constraint((T0312)E27.CB, (T0312)H39.CB) [> 3.1752 = 5.2920 < 6.8796] w=0.3467 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)S74.CB) [> 4.3633 = 7.2722 < 9.4539] w=0.3467 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)V92.CB) [> 3.8553 = 6.4255 < 8.3532] w=0.3463 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)E71.CB) [> 4.0611 = 6.7685 < 8.7991] w=0.3446 to align # Constraint # added constraint: constraint((T0312)L70.CB, (T0312)K96.CB) [> 2.7696 = 4.6161 < 6.0009] w=0.3433 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)A37.CB) [> 4.4663 = 7.4439 < 9.6771] w=0.3409 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)H104.CB) [> 3.8899 = 6.4832 < 8.4282] w=0.3403 to align # Constraint # added constraint: constraint((T0312)Y54.CB, (T0312)E68.CB) [> 3.9449 = 6.5749 < 8.5473] w=0.3390 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)G103.CA) [> 3.4776 = 5.7959 < 7.5347] w=0.3386 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)L94.CB) [> 3.4751 = 5.7919 < 7.5294] w=0.3367 to align # Constraint # added constraint: constraint((T0312)G11.CA, (T0312)H36.CB) [> 3.5271 = 5.8784 < 7.6420] w=0.3357 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)A37.CB) [> 4.6416 = 7.7360 < 10.0568] w=0.3357 to align # Constraint # added constraint: constraint((T0312)R15.CB, (T0312)I26.CB) [> 3.2090 = 5.3483 < 6.9527] w=0.3357 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)G77.CA) [> 4.4681 = 7.4468 < 9.6808] w=0.3343 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)A108.CB) [> 4.1853 = 6.9755 < 9.0681] w=0.3295 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)L105.CB) [> 3.7799 = 6.2998 < 8.1898] w=0.3295 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)R47.CB) [> 3.1006 = 5.1677 < 6.7180] w=0.3270 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)I51.CB) [> 4.2742 = 7.1237 < 9.2607] w=0.3270 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)V115.CB) [> 3.7767 = 6.2945 < 8.1829] w=0.3259 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)L75.CB) [> 4.3672 = 7.2787 < 9.4623] w=0.3249 to align # Constraint # added constraint: constraint((T0312)G44.CA, (T0312)I72.CB) [> 3.5884 = 5.9807 < 7.7749] w=0.3245 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)H104.CB) [> 3.3401 = 5.5668 < 7.2368] w=0.3240 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)V46.CB) [> 3.8650 = 6.4417 < 8.3743] w=0.3237 to align # Constraint # added constraint: constraint((T0312)R47.CB, (T0312)M67.CB) [> 3.9771 = 6.6284 < 8.6169] w=0.3193 to align # Constraint # added constraint: constraint((T0312)Y54.CB, (T0312)E71.CB) [> 3.3050 = 5.5083 < 7.1608] w=0.3184 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)I72.CB) [> 3.4200 = 5.6999 < 7.4099] w=0.3184 to align # Constraint # added constraint: constraint((T0312)K33.CB, (T0312)S76.CB) [> 3.5237 = 5.8728 < 7.6347] w=0.3184 to align # Constraint # added constraint: constraint((T0312)F29.CB, (T0312)S74.CB) [> 3.2225 = 5.3708 < 6.9820] w=0.3184 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)S74.CB) [> 3.4223 = 5.7038 < 7.4149] w=0.3184 to align # Constraint # added constraint: constraint((T0312)Q25.CB, (T0312)S74.CB) [> 3.2508 = 5.4181 < 7.0435] w=0.3184 to align # Constraint # added constraint: constraint((T0312)G11.CA, (T0312)F29.CB) [> 4.7483 = 7.9139 < 10.2881] w=0.3173 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)F29.CB) [> 2.9188 = 4.8647 < 6.3241] w=0.3173 to align # Constraint # added constraint: constraint((T0312)S48.CB, (T0312)E109.CB) [> 2.3871 = 3.9786 < 5.1721] w=0.3134 to align # Constraint # added constraint: constraint((T0312)R47.CB, (T0312)V110.CB) [> 4.1796 = 6.9660 < 9.0557] w=0.3134 to align # Constraint # added constraint: constraint((T0312)R47.CB, (T0312)E109.CB) [> 2.6430 = 4.4050 < 5.7266] w=0.3134 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)V110.CB) [> 3.1762 = 5.2937 < 6.8818] w=0.3134 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)E109.CB) [> 3.6821 = 6.1368 < 7.9778] w=0.3134 to align # Constraint # added constraint: constraint((T0312)A45.CB, (T0312)V110.CB) [> 4.5543 = 7.5906 < 9.8678] w=0.3134 to align # Constraint # added constraint: constraint((T0312)G11.CA, (T0312)I35.CB) [> 3.5283 = 5.8804 < 7.6446] w=0.3122 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)I35.CB) [> 4.4281 = 7.3802 < 9.5942] w=0.3122 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)H36.CB) [> 2.9004 = 4.8341 < 6.2843] w=0.3122 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)L30.CB) [> 3.4192 = 5.6987 < 7.4083] w=0.3122 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)I35.CB) [> 3.0785 = 5.1308 < 6.6701] w=0.3122 to align # Constraint # added constraint: constraint((T0312)L16.CB, (T0312)H39.CB) [> 4.4481 = 7.4135 < 9.6376] w=0.3122 to align # Constraint # added constraint: constraint((T0312)Y53.CB, (T0312)G103.CA) [> 3.3713 = 5.6189 < 7.3046] w=0.3108 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)V117.CB) [> 4.1474 = 6.9123 < 8.9860] w=0.3072 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)V117.CB) [> 3.6271 = 6.0452 < 7.8588] w=0.3072 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)Y101.CB) [> 4.6519 = 7.7532 < 10.0792] w=0.3064 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)G102.CA) [> 3.2201 = 5.3669 < 6.9770] w=0.3014 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)Y101.CB) [> 4.5358 = 7.5597 < 9.8276] w=0.3014 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)A49.CB) [> 3.9404 = 6.5674 < 8.5376] w=0.3010 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)F116.CB) [> 3.7467 = 6.2446 < 8.1179] w=0.2995 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)V117.CB) [> 3.6906 = 6.1510 < 7.9963] w=0.2995 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)V117.CB) [> 4.0812 = 6.8021 < 8.8427] w=0.2983 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)V92.CB) [> 3.8209 = 6.3682 < 8.2787] w=0.2922 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)S76.CB) [> 4.5528 = 7.5881 < 9.8645] w=0.2906 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)F116.CB) [> 4.7712 = 7.9520 < 10.3376] w=0.2873 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)L118.CB) [> 2.5356 = 4.2260 < 5.4938] w=0.2873 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)L120.CB) [> 4.2500 = 7.0834 < 9.2084] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)V79.CB) [> 4.0999 = 6.8333 < 8.8832] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)V115.CB) [> 4.0942 = 6.8237 < 8.8708] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)F116.CB) [> 4.1615 = 6.9358 < 9.0166] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)V117.CB) [> 3.5405 = 5.9008 < 7.6710] w=0.2873 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)E114.CB) [> 4.7698 = 7.9497 < 10.3346] w=0.2873 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)F116.CB) [> 2.4978 = 4.1631 < 5.4120] w=0.2873 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)V117.CB) [> 4.7976 = 7.9961 < 10.3949] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)V110.CB) [> 4.2320 = 7.0533 < 9.1693] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)C113.CB) [> 3.1237 = 5.2062 < 6.7681] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)E114.CB) [> 4.2617 = 7.1027 < 9.2336] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)V115.CB) [> 3.2193 = 5.3656 < 6.9752] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)F116.CB) [> 4.6406 = 7.7343 < 10.0546] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)C113.CB) [> 3.6877 = 6.1461 < 7.9900] w=0.2873 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)A108.CB) [> 4.5539 = 7.5899 < 9.8668] w=0.2873 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)V110.CB) [> 3.4794 = 5.7991 < 7.5388] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)V79.CB) [> 4.4384 = 7.3974 < 9.6166] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)V117.CB) [> 3.8769 = 6.4615 < 8.3999] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)V79.CB) [> 3.8486 = 6.4143 < 8.3386] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)S80.CB) [> 3.5851 = 5.9752 < 7.7678] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)L120.CB) [> 2.5097 = 4.1828 < 5.4377] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)V79.CB) [> 2.5708 = 4.2846 < 5.5700] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)L118.CB) [> 3.8154 = 6.3591 < 8.2668] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)P119.CB) [> 2.9971 = 4.9951 < 6.4936] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)L120.CB) [> 3.7388 = 6.2313 < 8.1006] w=0.2873 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)V79.CB) [> 4.5981 = 7.6635 < 9.9626] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)A108.CB) [> 3.0234 = 5.0389 < 6.5506] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)E109.CB) [> 4.7061 = 7.8434 < 10.1965] w=0.2873 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)L105.CB) [> 4.4237 = 7.3728 < 9.5846] w=0.2873 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)S107.CB) [> 2.7590 = 4.5983 < 5.9778] w=0.2873 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)A108.CB) [> 3.9171 = 6.5286 < 8.4871] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)G103.CA) [> 2.4418 = 4.0697 < 5.2906] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)H104.CB) [> 3.6134 = 6.0224 < 7.8291] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)L105.CB) [> 3.6050 = 6.0083 < 7.8108] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)F106.CB) [> 3.9817 = 6.6361 < 8.6270] w=0.2873 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)G103.CA) [> 3.3468 = 5.5780 < 7.2513] w=0.2873 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)H104.CB) [> 3.0657 = 5.1095 < 6.6424] w=0.2873 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)F106.CB) [> 3.7667 = 6.2779 < 8.1612] w=0.2873 to align # Constraint # added constraint: constraint((T0312)Y53.CB, (T0312)G102.CA) [> 4.4658 = 7.4429 < 9.6758] w=0.2873 to align # Constraint # added constraint: constraint((T0312)Y53.CB, (T0312)H104.CB) [> 4.2913 = 7.1521 < 9.2978] w=0.2873 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)G102.CA) [> 4.5306 = 7.5509 < 9.8162] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)E114.CB) [> 3.1457 = 5.2428 < 6.8157] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)F116.CB) [> 4.7213 = 7.8688 < 10.2295] w=0.2873 to align # Constraint # added constraint: constraint((T0312)G44.CA, (T0312)V110.CB) [> 4.6107 = 7.6844 < 9.9897] w=0.2873 to align # Constraint # added constraint: constraint((T0312)G44.CA, (T0312)F111.CB) [> 4.7299 = 7.8832 < 10.2481] w=0.2873 to align # Constraint # added constraint: constraint((T0312)G44.CA, (T0312)A112.CB) [> 3.7071 = 6.1785 < 8.0321] w=0.2873 to align # Constraint # added constraint: constraint((T0312)G44.CA, (T0312)C113.CB) [> 2.5774 = 4.2956 < 5.5843] w=0.2873 to align # Constraint # added constraint: constraint((T0312)G44.CA, (T0312)E114.CB) [> 3.8201 = 6.3668 < 8.2768] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A45.CB, (T0312)F111.CB) [> 2.6748 = 4.4579 < 5.7953] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A45.CB, (T0312)A112.CB) [> 3.0370 = 5.0617 < 6.5802] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A45.CB, (T0312)C113.CB) [> 4.1139 = 6.8566 < 8.9135] w=0.2873 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)L73.CB) [> 4.0166 = 6.6943 < 8.7025] w=0.2873 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)A108.CB) [> 3.2299 = 5.3831 < 6.9980] w=0.2873 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)F111.CB) [> 3.6372 = 6.0619 < 7.8805] w=0.2873 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)C113.CB) [> 4.1961 = 6.9934 < 9.0915] w=0.2873 to align # Constraint # added constraint: constraint((T0312)R47.CB, (T0312)F111.CB) [> 2.6996 = 4.4994 < 5.8492] w=0.2873 to align # Constraint # added constraint: constraint((T0312)S48.CB, (T0312)S107.CB) [> 4.3245 = 7.2075 < 9.3697] w=0.2873 to align # Constraint # added constraint: constraint((T0312)S48.CB, (T0312)A108.CB) [> 3.4388 = 5.7314 < 7.4508] w=0.2873 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)L105.CB) [> 4.4699 = 7.4497 < 9.6847] w=0.2873 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)G95.CA) [> 3.6542 = 6.0903 < 7.9174] w=0.2867 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)I90.CB) [> 3.8587 = 6.4311 < 8.3605] w=0.2857 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)L93.CB) [> 3.5901 = 5.9835 < 7.7786] w=0.2839 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)L105.CB) [> 3.4489 = 5.7482 < 7.4726] w=0.2827 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)L93.CB) [> 3.6420 = 6.0700 < 7.8909] w=0.2759 to align # Constraint # added constraint: constraint((T0312)V100.CB, (T0312)V115.CB) [> 3.3754 = 5.6256 < 7.3133] w=0.2748 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)G95.CA) [> 4.5365 = 7.5608 < 9.8290] w=0.2698 to align # Constraint # added constraint: constraint((T0312)S48.CB, (T0312)M67.CB) [> 3.7887 = 6.3146 < 8.2089] w=0.2698 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)A49.CB) [> 3.9949 = 6.6582 < 8.6556] w=0.2687 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)L94.CB) [> 3.8386 = 6.3976 < 8.3169] w=0.2673 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)L66.CB) [> 4.6140 = 7.6900 < 9.9970] w=0.2648 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)K96.CB) [> 3.8666 = 6.4444 < 8.3777] w=0.2632 to align # Constraint # added constraint: constraint((T0312)L70.CB, (T0312)D97.CB) [> 3.8356 = 6.3926 < 8.3104] w=0.2630 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)I90.CB) [> 3.9939 = 6.6565 < 8.6534] w=0.2606 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)I72.CB) [> 4.4083 = 7.3471 < 9.5512] w=0.2580 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)E71.CB) [> 3.9474 = 6.5791 < 8.5528] w=0.2580 to align # Constraint # added constraint: constraint((T0312)A45.CB, (T0312)I72.CB) [> 3.3459 = 5.5765 < 7.2495] w=0.2580 to align # Constraint # added constraint: constraint((T0312)A45.CB, (T0312)E71.CB) [> 3.7752 = 6.2920 < 8.1797] w=0.2580 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)V92.CB) [> 4.4240 = 7.3734 < 9.5854] w=0.2578 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)L93.CB) [> 3.9386 = 6.5644 < 8.5337] w=0.2560 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)V46.CB) [> 3.3536 = 5.5893 < 7.2661] w=0.2532 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)A49.CB) [> 4.0646 = 6.7743 < 8.8066] w=0.2488 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)I72.CB) [> 4.4866 = 7.4776 < 9.7209] w=0.2488 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)S74.CB) [> 2.7848 = 4.6414 < 6.0338] w=0.2488 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)I72.CB) [> 4.2307 = 7.0512 < 9.1666] w=0.2488 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)L73.CB) [> 2.6862 = 4.4771 < 5.8202] w=0.2488 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)S74.CB) [> 4.3472 = 7.2453 < 9.4189] w=0.2488 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)L75.CB) [> 4.5541 = 7.5902 < 9.8673] w=0.2488 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)I90.CB) [> 3.9688 = 6.6146 < 8.5990] w=0.2400 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)V92.CB) [> 4.5017 = 7.5029 < 9.7538] w=0.2400 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)L94.CB) [> 4.5226 = 7.5377 < 9.7990] w=0.2386 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)H91.CB) [> 3.4234 = 5.7056 < 7.4173] w=0.2380 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)H91.CB) [> 4.0440 = 6.7399 < 8.7619] w=0.2380 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)C113.CB) [> 3.8844 = 6.4739 < 8.4161] w=0.2369 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)H104.CB) [> 4.3107 = 7.1845 < 9.3399] w=0.2361 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)I40.CB) [> 3.8340 = 6.3899 < 8.3069] w=0.2350 to align # Constraint # added constraint: constraint((T0312)V79.CB, (T0312)H91.CB) [> 4.6726 = 7.7876 < 10.1239] w=0.2337 to align # Constraint # added constraint: constraint((T0312)S80.CB, (T0312)H91.CB) [> 4.0897 = 6.8163 < 8.8611] w=0.2337 to align # Constraint # added constraint: constraint((T0312)L94.CB, (T0312)A108.CB) [> 4.3402 = 7.2337 < 9.4039] w=0.2337 to align # Constraint # added constraint: constraint((T0312)Y54.CB, (T0312)P69.CB) [> 4.1241 = 6.8736 < 8.9357] w=0.2334 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)V117.CB) [> 3.5885 = 5.9808 < 7.7750] w=0.2330 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)L73.CB) [> 3.9635 = 6.6058 < 8.5875] w=0.2322 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)L118.CB) [> 3.9972 = 6.6620 < 8.6607] w=0.2319 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)I90.CB) [> 4.2968 = 7.1613 < 9.3097] w=0.2314 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)V92.CB) [> 3.9093 = 6.5154 < 8.4701] w=0.2262 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)V115.CB) [> 3.3463 = 5.5772 < 7.2504] w=0.2257 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)V115.CB) [> 3.4190 = 5.6984 < 7.4079] w=0.2217 to align # Constraint # added constraint: constraint((T0312)F6.CB, (T0312)K33.CB) [> 3.8749 = 6.4581 < 8.3955] w=0.2216 to align # Constraint # added constraint: constraint((T0312)V8.CB, (T0312)K33.CB) [> 4.6450 = 7.7417 < 10.0641] w=0.2216 to align # Constraint # added constraint: constraint((T0312)D17.CB, (T0312)I26.CB) [> 4.0520 = 6.7533 < 8.7793] w=0.2215 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)Y101.CB) [> 3.8795 = 6.4658 < 8.4056] w=0.2214 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)F116.CB) [> 3.8330 = 6.3883 < 8.3047] w=0.2205 to align # Constraint # added constraint: constraint((T0312)F87.CB, (T0312)L118.CB) [> 4.1601 = 6.9335 < 9.0136] w=0.2205 to align # Constraint # added constraint: constraint((T0312)F87.CB, (T0312)V117.CB) [> 3.7559 = 6.2598 < 8.1378] w=0.2205 to align # Constraint # added constraint: constraint((T0312)F116.CB, (T0312)A128.CB) [> 3.4538 = 5.7563 < 7.4832] w=0.2157 to align # Constraint # added constraint: constraint((T0312)V115.CB, (T0312)A128.CB) [> 4.0337 = 6.7228 < 8.7396] w=0.2157 to align # Constraint # added constraint: constraint((T0312)V100.CB, (T0312)E114.CB) [> 4.1212 = 6.8687 < 8.9293] w=0.2157 to align # Constraint # added constraint: constraint((T0312)Y101.CB, (T0312)E114.CB) [> 4.2895 = 7.1492 < 9.2940] w=0.2157 to align # Constraint # added constraint: constraint((T0312)Y101.CB, (T0312)V115.CB) [> 3.3921 = 5.6535 < 7.3495] w=0.2157 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)L120.CB) [> 3.9031 = 6.5052 < 8.4567] w=0.2131 to align # Constraint # added constraint: constraint((T0312)F87.CB, (T0312)L120.CB) [> 4.4705 = 7.4508 < 9.6861] w=0.2131 to align # Constraint # added constraint: constraint((T0312)F87.CB, (T0312)P119.CB) [> 3.2685 = 5.4476 < 7.0819] w=0.2131 to align # Constraint # added constraint: constraint((T0312)L94.CB, (T0312)V115.CB) [> 3.2249 = 5.3748 < 6.9873] w=0.2120 to align # Constraint # added constraint: constraint((T0312)L16.CB, (T0312)I40.CB) [> 3.3599 = 5.5998 < 7.2798] w=0.2115 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)P119.CB) [> 3.2910 = 5.4850 < 7.1305] w=0.2114 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)Y61.CB) [> 2.9568 = 4.9280 < 6.4064] w=0.2112 to align # Constraint # added constraint: constraint((T0312)G102.CA, (T0312)V115.CB) [> 3.9752 = 6.6254 < 8.6130] w=0.2083 to align # Constraint # added constraint: constraint((T0312)G102.CA, (T0312)A112.CB) [> 3.8291 = 6.3819 < 8.2965] w=0.2083 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)G77.CA) [> 3.7218 = 6.2030 < 8.0639] w=0.2082 to align # Constraint # added constraint: constraint((T0312)F129.CB, (T0312)W138.CB) [> 4.5374 = 7.5623 < 9.8310] w=0.2068 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)H91.CB) [> 4.4151 = 7.3585 < 9.5660] w=0.2067 to align # Constraint # added constraint: constraint((T0312)V23.CB, (T0312)H89.CB) [> 4.6520 = 7.7533 < 10.0793] w=0.2057 to align # Constraint # added constraint: constraint((T0312)V23.CB, (T0312)I90.CB) [> 3.4706 = 5.7843 < 7.5195] w=0.2057 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)L94.CB) [> 3.5482 = 5.9136 < 7.6877] w=0.2057 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)L105.CB) [> 3.9193 = 6.5322 < 8.4918] w=0.2045 to align # Constraint # added constraint: constraint((T0312)Y53.CB, (T0312)P69.CB) [> 3.3754 = 5.6257 < 7.3134] w=0.2040 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)A42.CB) [> 3.8077 = 6.3462 < 8.2500] w=0.2034 to align # Constraint # added constraint: constraint((T0312)P86.CB, (T0312)P119.CB) [> 4.5864 = 7.6441 < 9.9373] w=0.1994 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)L75.CB) [> 3.9594 = 6.5990 < 8.5787] w=0.1974 to align # Constraint # added constraint: constraint((T0312)M67.CB, (T0312)G98.CA) [> 4.0057 = 6.6762 < 8.6791] w=0.1965 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)I90.CB) [> 3.6736 = 6.1226 < 7.9594] w=0.1946 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)I90.CB) [> 4.1214 = 6.8690 < 8.9297] w=0.1946 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)H91.CB) [> 4.0737 = 6.7896 < 8.8265] w=0.1946 to align # Constraint # added constraint: constraint((T0312)K85.CB, (T0312)S121.CB) [> 3.1170 = 5.1950 < 6.7535] w=0.1920 to align # Constraint # added constraint: constraint((T0312)G34.CA, (T0312)D83.CB) [> 4.4647 = 7.4412 < 9.6735] w=0.1915 to align # Constraint # added constraint: constraint((T0312)E32.CB, (T0312)P119.CB) [> 4.2537 = 7.0895 < 9.2164] w=0.1915 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)I90.CB) [> 4.6279 = 7.7132 < 10.0271] w=0.1915 to align # Constraint # added constraint: constraint((T0312)L94.CB, (T0312)L105.CB) [> 3.0617 = 5.1028 < 6.6337] w=0.1915 to align # Constraint # added constraint: constraint((T0312)L94.CB, (T0312)G103.CA) [> 3.3391 = 5.5651 < 7.2347] w=0.1915 to align # Constraint # added constraint: constraint((T0312)L66.CB, (T0312)Y101.CB) [> 3.7740 = 6.2900 < 8.1770] w=0.1915 to align # Constraint # added constraint: constraint((T0312)K64.CB, (T0312)G102.CA) [> 4.5990 = 7.6649 < 9.9644] w=0.1915 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)L94.CB) [> 3.6838 = 6.1397 < 7.9816] w=0.1915 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)V92.CB) [> 4.0172 = 6.6953 < 8.7039] w=0.1915 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)L120.CB) [> 3.6609 = 6.1014 < 7.9318] w=0.1915 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)M81.CB) [> 3.6114 = 6.0189 < 7.8246] w=0.1915 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)H91.CB) [> 4.1381 = 6.8968 < 8.9659] w=0.1876 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)H89.CB) [> 3.1653 = 5.2755 < 6.8582] w=0.1849 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)I90.CB) [> 3.1417 = 5.2361 < 6.8069] w=0.1849 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)L73.CB) [> 3.8827 = 6.4712 < 8.4125] w=0.1847 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)H91.CB) [> 3.5286 = 5.8810 < 7.6452] w=0.1832 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)L73.CB) [> 4.4623 = 7.4372 < 9.6683] w=0.1823 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)I72.CB) [> 2.8267 = 4.7111 < 6.1245] w=0.1823 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)I72.CB) [> 4.2840 = 7.1400 < 9.2820] w=0.1823 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)C88.CB) [> 4.0874 = 6.8123 < 8.8560] w=0.1779 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)V117.CB) [> 4.3952 = 7.3253 < 9.5229] w=0.1776 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)H89.CB) [> 3.6486 = 6.0810 < 7.9053] w=0.1773 to align # Constraint # added constraint: constraint((T0312)Y61.CB, (T0312)L75.CB) [> 3.1916 = 5.3194 < 6.9152] w=0.1773 to align # Constraint # added constraint: constraint((T0312)Y53.CB, (T0312)L75.CB) [> 2.9176 = 4.8626 < 6.3214] w=0.1773 to align # Constraint # added constraint: constraint((T0312)A128.CB, (T0312)L139.CB) [> 3.8186 = 6.3643 < 8.2736] w=0.1751 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)I90.CB) [> 3.3953 = 5.6589 < 7.3565] w=0.1747 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)H89.CB) [> 4.1597 = 6.9329 < 9.0127] w=0.1747 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)H91.CB) [> 4.3335 = 7.2224 < 9.3892] w=0.1747 to align # Constraint # added constraint: constraint((T0312)L70.CB, (T0312)V92.CB) [> 4.0772 = 6.7954 < 8.8340] w=0.1734 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)F116.CB) [> 3.9113 = 6.5188 < 8.4744] w=0.1728 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)C88.CB) [> 3.8036 = 6.3392 < 8.2410] w=0.1715 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)G102.CA) [> 3.7956 = 6.3260 < 8.2238] w=0.1706 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)F116.CB) [> 3.6546 = 6.0909 < 7.9182] w=0.1666 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)V115.CB) [> 3.6930 = 6.1550 < 8.0015] w=0.1642 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)Y101.CB) [> 3.9989 = 6.6648 < 8.6643] w=0.1617 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)I72.CB) [> 4.1319 = 6.8865 < 8.9524] w=0.1588 to align # Constraint # added constraint: constraint((T0312)V117.CB, (T0312)R127.CB) [> 3.2591 = 5.4319 < 7.0615] w=0.1566 to align # Constraint # added constraint: constraint((T0312)F116.CB, (T0312)R127.CB) [> 3.8522 = 6.4203 < 8.3464] w=0.1566 to align # Constraint # added constraint: constraint((T0312)V115.CB, (T0312)F129.CB) [> 3.1284 = 5.2140 < 6.7782] w=0.1566 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)I40.CB) [> 3.5742 = 5.9571 < 7.7442] w=0.1564 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)I40.CB) [> 4.5582 = 7.5970 < 9.8761] w=0.1564 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)L73.CB) [> 3.2137 = 5.3562 < 6.9630] w=0.1540 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)G103.CA) [> 3.5561 = 5.9269 < 7.7049] w=0.1533 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)C88.CB) [> 4.2068 = 7.0113 < 9.1147] w=0.1528 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)H91.CB) [> 2.9963 = 4.9939 < 6.4920] w=0.1528 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)L93.CB) [> 4.1615 = 6.9359 < 9.0166] w=0.1528 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)H91.CB) [> 3.9180 = 6.5300 < 8.4889] w=0.1528 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)L93.CB) [> 4.2154 = 7.0258 < 9.1335] w=0.1528 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)F111.CB) [> 3.9901 = 6.6502 < 8.6453] w=0.1517 to align # Constraint # added constraint: constraint((T0312)F87.CB, (T0312)F111.CB) [> 3.6673 = 6.1121 < 7.9457] w=0.1517 to align # Constraint # added constraint: constraint((T0312)P86.CB, (T0312)F111.CB) [> 4.0242 = 6.7070 < 8.7191] w=0.1517 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)C88.CB) [> 3.4299 = 5.7165 < 7.4314] w=0.1515 to align # Constraint # added constraint: constraint((T0312)G103.CA, (T0312)C113.CB) [> 4.1156 = 6.8594 < 8.9172] w=0.1492 to align # Constraint # added constraint: constraint((T0312)G102.CA, (T0312)E114.CB) [> 4.7816 = 7.9694 < 10.3602] w=0.1492 to align # Constraint # added constraint: constraint((T0312)A45.CB, (T0312)H89.CB) [> 3.7362 = 6.2270 < 8.0950] w=0.1488 to align # Constraint # added constraint: constraint((T0312)E7.CB, (T0312)A49.CB) [> 4.5799 = 7.6331 < 9.9230] w=0.1477 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)I90.CB) [> 3.7529 = 6.2549 < 8.1313] w=0.1469 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)Y101.CB) [> 3.6613 = 6.1021 < 7.9327] w=0.1430 to align # Constraint # added constraint: constraint((T0312)E99.CB, (T0312)F116.CB) [> 3.9886 = 6.6476 < 8.6419] w=0.1419 to align # Constraint # added constraint: constraint((T0312)V100.CB, (T0312)V117.CB) [> 3.5280 = 5.8800 < 7.6440] w=0.1419 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)V115.CB) [> 4.2095 = 7.0158 < 9.1205] w=0.1381 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)V117.CB) [> 4.4915 = 7.4858 < 9.7316] w=0.1381 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)V117.CB) [> 3.7524 = 6.2540 < 8.1301] w=0.1381 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)V110.CB) [> 3.9783 = 6.6304 < 8.6196] w=0.1347 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)C113.CB) [> 4.0467 = 6.7445 < 8.7678] w=0.1336 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)V92.CB) [> 3.0443 = 5.0739 < 6.5961] w=0.1329 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)L93.CB) [> 2.8996 = 4.8326 < 6.2824] w=0.1329 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)V92.CB) [> 4.3268 = 7.2114 < 9.3748] w=0.1329 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)L93.CB) [> 4.2514 = 7.0856 < 9.2113] w=0.1329 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)L137.CB) [> 3.7320 = 6.2199 < 8.0859] w=0.1329 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)G95.CA) [> 3.2317 = 5.3862 < 7.0021] w=0.1329 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)C88.CB) [> 3.7864 = 6.3107 < 8.2039] w=0.1329 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)I90.CB) [> 4.5732 = 7.6220 < 9.9085] w=0.1329 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)H89.CB) [> 2.2951 = 3.8251 < 4.9727] w=0.1329 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)L93.CB) [> 3.9134 = 6.5223 < 8.4789] w=0.1329 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)H91.CB) [> 4.0766 = 6.7944 < 8.8327] w=0.1329 to align # Constraint # added constraint: constraint((T0312)G11.CA, (T0312)G95.CA) [> 4.2202 = 7.0336 < 9.1437] w=0.1329 to align # Constraint # added constraint: constraint((T0312)G11.CA, (T0312)I40.CB) [> 4.3075 = 7.1792 < 9.3329] w=0.1329 to align # Constraint # added constraint: constraint((T0312)A124.CB, (T0312)L139.CB) [> 3.4137 = 5.6894 < 7.3962] w=0.1329 to align # Constraint # added constraint: constraint((T0312)Y101.CB, (T0312)L137.CB) [> 4.2197 = 7.0328 < 9.1426] w=0.1329 to align # Constraint # added constraint: constraint((T0312)S84.CB, (T0312)L120.CB) [> 4.1298 = 6.8829 < 8.9478] w=0.1329 to align # Constraint # added constraint: constraint((T0312)M81.CB, (T0312)W138.CB) [> 3.2058 = 5.3430 < 6.9460] w=0.1329 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)I72.CB) [> 3.7324 = 6.2206 < 8.0868] w=0.1329 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)E99.CB) [> 2.7701 = 4.6169 < 6.0020] w=0.1329 to align # Constraint # added constraint: constraint((T0312)S80.CB, (T0312)F136.CB) [> 3.3664 = 5.6106 < 7.2938] w=0.1329 to align # Constraint # added constraint: constraint((T0312)S80.CB, (T0312)L137.CB) [> 4.5114 = 7.5191 < 9.7748] w=0.1329 to align # Constraint # added constraint: constraint((T0312)S80.CB, (T0312)W138.CB) [> 4.0451 = 6.7419 < 8.7645] w=0.1329 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)L73.CB) [> 4.1389 = 6.8982 < 8.9676] w=0.1305 to align # Constraint # added constraint: constraint((T0312)P86.CB, (T0312)E109.CB) [> 4.7448 = 7.9081 < 10.2805] w=0.1291 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)L75.CB) [> 3.8521 = 6.4202 < 8.3463] w=0.1278 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)A112.CB) [> 3.7346 = 6.2244 < 8.0917] w=0.1274 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)L105.CB) [> 3.3275 = 5.5458 < 7.2095] w=0.1257 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)H39.CB) [> 3.8193 = 6.3655 < 8.2752] w=0.1252 to align # Constraint # added constraint: constraint((T0312)L16.CB, (T0312)I26.CB) [> 4.4555 = 7.4258 < 9.6535] w=0.1252 to align # Constraint # added constraint: constraint((T0312)C113.CB, (T0312)F129.CB) [> 3.7095 = 6.1824 < 8.0372] w=0.1249 to align # Constraint # added constraint: constraint((T0312)C113.CB, (T0312)F136.CB) [> 3.9107 = 6.5179 < 8.4732] w=0.1249 to align # Constraint # added constraint: constraint((T0312)G9.CA, (T0312)F116.CB) [> 4.1680 = 6.9467 < 9.0307] w=0.1218 to align # Constraint # added constraint: constraint((T0312)G11.CA, (T0312)E114.CB) [> 4.2184 = 7.0307 < 9.1399] w=0.1218 to align # Constraint # added constraint: constraint((T0312)G11.CA, (T0312)V115.CB) [> 3.6753 = 6.1254 < 7.9631] w=0.1218 to align # Constraint # added constraint: constraint((T0312)G11.CA, (T0312)F116.CB) [> 3.0916 = 5.1527 < 6.6986] w=0.1218 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)E114.CB) [> 4.4581 = 7.4302 < 9.6593] w=0.1218 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)V115.CB) [> 3.2817 = 5.4694 < 7.1102] w=0.1218 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)A112.CB) [> 4.5378 = 7.5630 < 9.8318] w=0.1218 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)C113.CB) [> 4.4536 = 7.4227 < 9.6495] w=0.1218 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)E114.CB) [> 3.5246 = 5.8744 < 7.6367] w=0.1218 to align # Constraint # added constraint: constraint((T0312)L13.CB, (T0312)V115.CB) [> 4.4998 = 7.4997 < 9.7496] w=0.1218 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)A112.CB) [> 4.4624 = 7.4373 < 9.6685] w=0.1218 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)C113.CB) [> 3.3745 = 5.6241 < 7.3114] w=0.1218 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)E114.CB) [> 4.6627 = 7.7712 < 10.1026] w=0.1218 to align # Constraint # added constraint: constraint((T0312)R15.CB, (T0312)F111.CB) [> 3.7972 = 6.3287 < 8.2273] w=0.1218 to align # Constraint # added constraint: constraint((T0312)R15.CB, (T0312)A112.CB) [> 2.9227 = 4.8713 < 6.3326] w=0.1218 to align # Constraint # added constraint: constraint((T0312)L16.CB, (T0312)F111.CB) [> 3.6264 = 6.0440 < 7.8572] w=0.1218 to align # Constraint # added constraint: constraint((T0312)L16.CB, (T0312)A112.CB) [> 4.4262 = 7.3770 < 9.5901] w=0.1218 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)I51.CB) [> 4.0865 = 6.8108 < 8.8541] w=0.1218 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)I72.CB) [> 4.1582 = 6.9304 < 9.0095] w=0.1183 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)F116.CB) [> 3.8944 = 6.4907 < 8.4379] w=0.1182 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)F116.CB) [> 4.3964 = 7.3273 < 9.5255] w=0.1182 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)V115.CB) [> 3.2902 = 5.4836 < 7.1287] w=0.1182 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)I90.CB) [> 4.4865 = 7.4775 < 9.7208] w=0.1182 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)H89.CB) [> 4.1167 = 6.8611 < 8.9195] w=0.1182 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)C113.CB) [> 3.2484 = 5.4140 < 7.0382] w=0.1182 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)V100.CB) [> 3.5533 = 5.9221 < 7.6987] w=0.1143 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)L75.CB) [> 3.6837 = 6.1394 < 7.9812] w=0.1135 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)S74.CB) [> 3.8033 = 6.3389 < 8.2405] w=0.1135 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)H89.CB) [> 3.2006 = 5.3344 < 6.9347] w=0.1130 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)V50.CB) [> 3.2544 = 5.4239 < 7.0511] w=0.1119 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)M81.CB) [> 3.6620 = 6.1034 < 7.9344] w=0.1109 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)I90.CB) [> 4.3715 = 7.2858 < 9.4716] w=0.1099 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)C88.CB) [> 4.4337 = 7.3895 < 9.6063] w=0.1099 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)P125.CB) [> 4.6434 = 7.7391 < 10.0608] w=0.1087 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)P125.CB) [> 3.7938 = 6.3230 < 8.2199] w=0.1087 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)E114.CB) [> 4.3168 = 7.1946 < 9.3530] w=0.1075 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)C113.CB) [> 4.4762 = 7.4603 < 9.6985] w=0.1051 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)A112.CB) [> 4.1166 = 6.8610 < 8.9193] w=0.1038 to align # Constraint # added constraint: constraint((T0312)L118.CB, (T0312)R127.CB) [> 3.8227 = 6.3711 < 8.2824] w=0.1027 to align # Constraint # added constraint: constraint((T0312)V62.CB, (T0312)N78.CB) [> 4.3279 = 7.2132 < 9.3772] w=0.1027 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)C113.CB) [> 2.5677 = 4.2794 < 5.5633] w=0.1013 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)H91.CB) [> 4.3418 = 7.2364 < 9.4073] w=0.0994 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)I72.CB) [> 3.7883 = 6.3138 < 8.2079] w=0.0992 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)V117.CB) [> 3.8916 = 6.4860 < 8.4318] w=0.0986 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)V110.CB) [> 3.9493 = 6.5822 < 8.5568] w=0.0973 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)L105.CB) [> 4.1766 = 6.9610 < 9.0493] w=0.0966 to align # Constraint # added constraint: constraint((T0312)Y18.CB, (T0312)E109.CB) [> 3.6946 = 6.1577 < 8.0050] w=0.0958 to align # Constraint # added constraint: constraint((T0312)D17.CB, (T0312)V110.CB) [> 3.0814 = 5.1357 < 6.6764] w=0.0958 to align # Constraint # added constraint: constraint((T0312)D17.CB, (T0312)E109.CB) [> 4.2616 = 7.1026 < 9.2334] w=0.0958 to align # Constraint # added constraint: constraint((T0312)L16.CB, (T0312)V110.CB) [> 4.3055 = 7.1759 < 9.3286] w=0.0958 to align # Constraint # added constraint: constraint((T0312)L16.CB, (T0312)R47.CB) [> 4.5346 = 7.5576 < 9.8249] w=0.0958 to align # Constraint # added constraint: constraint((T0312)R15.CB, (T0312)C113.CB) [> 4.5424 = 7.5707 < 9.8419] w=0.0958 to align # Constraint # added constraint: constraint((T0312)R15.CB, (T0312)V110.CB) [> 4.0601 = 6.7669 < 8.7969] w=0.0958 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)V115.CB) [> 3.4721 = 5.7868 < 7.5228] w=0.0958 to align # Constraint # added constraint: constraint((T0312)L14.CB, (T0312)V110.CB) [> 3.2384 = 5.3974 < 7.0166] w=0.0958 to align # Constraint # added constraint: constraint((T0312)G11.CA, (T0312)V117.CB) [> 3.9951 = 6.6585 < 8.6561] w=0.0958 to align # Constraint # added constraint: constraint((T0312)K10.CB, (T0312)L118.CB) [> 4.7278 = 7.8797 < 10.2436] w=0.0958 to align # Constraint # added constraint: constraint((T0312)K10.CB, (T0312)V117.CB) [> 2.7897 = 4.6495 < 6.0444] w=0.0958 to align # Constraint # added constraint: constraint((T0312)G9.CA, (T0312)P119.CB) [> 4.2674 = 7.1124 < 9.2461] w=0.0958 to align # Constraint # added constraint: constraint((T0312)G9.CA, (T0312)L118.CB) [> 3.3276 = 5.5461 < 7.2099] w=0.0958 to align # Constraint # added constraint: constraint((T0312)G9.CA, (T0312)V117.CB) [> 3.8153 = 6.3588 < 8.2664] w=0.0958 to align # Constraint # added constraint: constraint((T0312)D55.CB, (T0312)P69.CB) [> 3.8828 = 6.4713 < 8.4127] w=0.0958 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)V92.CB) [> 3.4267 = 5.7112 < 7.4245] w=0.0958 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)P125.CB) [> 3.1923 = 5.3205 < 6.9166] w=0.0958 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)G52.CA) [> 3.5244 = 5.8740 < 7.6362] w=0.0939 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)G52.CA) [> 3.7423 = 6.2372 < 8.1083] w=0.0939 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)F106.CB) [> 3.6380 = 6.0634 < 7.8824] w=0.0926 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)F111.CB) [> 3.6047 = 6.0078 < 7.8101] w=0.0926 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)F106.CB) [> 3.6734 = 6.1223 < 7.9590] w=0.0926 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)V110.CB) [> 3.5929 = 5.9881 < 7.7846] w=0.0926 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)V115.CB) [> 4.3301 = 7.2168 < 9.3819] w=0.0926 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)I72.CB) [> 4.5619 = 7.6031 < 9.8840] w=0.0900 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)S74.CB) [> 4.1582 = 6.9303 < 9.0094] w=0.0887 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)Y101.CB) [> 4.3041 = 7.1734 < 9.3254] w=0.0878 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)E114.CB) [> 3.8543 = 6.4239 < 8.3510] w=0.0876 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)C113.CB) [> 4.4655 = 7.4425 < 9.6752] w=0.0876 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)V115.CB) [> 4.1579 = 6.9299 < 9.0089] w=0.0876 to align # Constraint # added constraint: constraint((T0312)G44.CA, (T0312)G77.CA) [> 3.3839 = 5.6398 < 7.3317] w=0.0847 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)L93.CB) [> 3.8051 = 6.3418 < 8.2444] w=0.0840 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)L73.CB) [> 2.8112 = 4.6854 < 6.0910] w=0.0835 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)L73.CB) [> 3.2584 = 5.4306 < 7.0598] w=0.0835 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)G77.CA) [> 2.7185 = 4.5308 < 5.8901] w=0.0835 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)L73.CB) [> 3.9194 = 6.5324 < 8.4921] w=0.0835 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)S74.CB) [> 3.8083 = 6.3472 < 8.2514] w=0.0835 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)G77.CA) [> 3.8829 = 6.4715 < 8.4130] w=0.0835 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)S74.CB) [> 2.8705 = 4.7842 < 6.2195] w=0.0835 to align # Constraint # added constraint: constraint((T0312)P86.CB, (T0312)S107.CB) [> 3.6054 = 6.0090 < 7.8116] w=0.0828 to align # Constraint # added constraint: constraint((T0312)F87.CB, (T0312)S107.CB) [> 3.4537 = 5.7562 < 7.4830] w=0.0828 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)G103.CA) [> 4.3685 = 7.2809 < 9.4652] w=0.0828 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)H104.CB) [> 4.0961 = 6.8269 < 8.8750] w=0.0828 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)G103.CA) [> 3.8052 = 6.3420 < 8.2446] w=0.0828 to align # Constraint # added constraint: constraint((T0312)V100.CB, (T0312)F116.CB) [> 4.0631 = 6.7718 < 8.8033] w=0.0828 to align # Constraint # added constraint: constraint((T0312)Y61.CB, (T0312)P125.CB) [> 4.3305 = 7.2175 < 9.3828] w=0.0828 to align # Constraint # added constraint: constraint((T0312)E114.CB, (T0312)F136.CB) [> 4.5536 = 7.5894 < 9.8662] w=0.0828 to align # Constraint # added constraint: constraint((T0312)C113.CB, (T0312)L135.CB) [> 3.5609 = 5.9349 < 7.7154] w=0.0828 to align # Constraint # added constraint: constraint((T0312)A112.CB, (T0312)L137.CB) [> 4.1092 = 6.8486 < 8.9032] w=0.0828 to align # Constraint # added constraint: constraint((T0312)A112.CB, (T0312)F136.CB) [> 2.7415 = 4.5691 < 5.9398] w=0.0828 to align # Constraint # added constraint: constraint((T0312)V110.CB, (T0312)L137.CB) [> 3.3190 = 5.5316 < 7.1911] w=0.0828 to align # Constraint # added constraint: constraint((T0312)F111.CB, (T0312)W138.CB) [> 4.3073 = 7.1788 < 9.3324] w=0.0828 to align # Constraint # added constraint: constraint((T0312)A112.CB, (T0312)L135.CB) [> 4.1790 = 6.9650 < 9.0545] w=0.0828 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)G77.CA) [> 2.7915 = 4.6526 < 6.0483] w=0.0819 to align # Constraint # added constraint: constraint((T0312)V115.CB, (T0312)A124.CB) [> 3.6854 = 6.1424 < 7.9851] w=0.0802 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)V115.CB) [> 4.6410 = 7.7350 < 10.0555] w=0.0802 to align # Constraint # added constraint: constraint((T0312)S48.CB, (T0312)V117.CB) [> 3.8879 = 6.4798 < 8.4237] w=0.0790 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)F116.CB) [> 3.9861 = 6.6435 < 8.6365] w=0.0790 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)V115.CB) [> 4.0486 = 6.7477 < 8.7720] w=0.0790 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)E114.CB) [> 4.1716 = 6.9526 < 9.0384] w=0.0790 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)C113.CB) [> 3.4783 = 5.7972 < 7.5363] w=0.0790 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)E114.CB) [> 3.6416 = 6.0693 < 7.8900] w=0.0790 to align # Constraint # added constraint: constraint((T0312)A45.CB, (T0312)C88.CB) [> 3.2417 = 5.4028 < 7.0237] w=0.0783 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)C88.CB) [> 3.7252 = 6.2087 < 8.0713] w=0.0783 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)H89.CB) [> 3.1868 = 5.3113 < 6.9047] w=0.0783 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)V92.CB) [> 3.5287 = 5.8811 < 7.6455] w=0.0783 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)H104.CB) [> 3.8335 = 6.3891 < 8.3059] w=0.0783 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)H89.CB) [> 4.4055 = 7.3425 < 9.5452] w=0.0758 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)G77.CA) [> 3.4506 = 5.7510 < 7.4763] w=0.0753 to align # Constraint # added constraint: constraint((T0312)D21.CB, (T0312)G134.CA) [> 2.8970 = 4.8284 < 6.2769] w=0.0739 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)V50.CB) [> 3.8306 = 6.3843 < 8.2995] w=0.0739 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)L135.CB) [> 3.2373 = 5.3955 < 7.0142] w=0.0739 to align # Constraint # added constraint: constraint((T0312)K20.CB, (T0312)F136.CB) [> 4.4219 = 7.3699 < 9.5808] w=0.0739 to align # Constraint # added constraint: constraint((T0312)G19.CA, (T0312)L135.CB) [> 4.1208 = 6.8679 < 8.9283] w=0.0739 to align # Constraint # added constraint: constraint((T0312)Y18.CB, (T0312)F136.CB) [> 3.1333 = 5.2222 < 6.7888] w=0.0739 to align # Constraint # added constraint: constraint((T0312)D17.CB, (T0312)L135.CB) [> 4.6858 = 7.8097 < 10.1526] w=0.0739 to align # Constraint # added constraint: constraint((T0312)L16.CB, (T0312)W138.CB) [> 4.3430 = 7.2383 < 9.4097] w=0.0739 to align # Constraint # added constraint: constraint((T0312)L16.CB, (T0312)F136.CB) [> 3.6035 = 6.0059 < 7.8076] w=0.0739 to align # Constraint # added constraint: constraint((T0312)E7.CB, (T0312)C113.CB) [> 4.5799 = 7.6331 < 9.9230] w=0.0739 to align # Constraint # added constraint: constraint((T0312)V117.CB, (T0312)W138.CB) [> 4.4576 = 7.4293 < 9.6580] w=0.0739 to align # Constraint # added constraint: constraint((T0312)Q56.CB, (T0312)V115.CB) [> 4.5928 = 7.6547 < 9.9511] w=0.0739 to align # Constraint # added constraint: constraint((T0312)Q56.CB, (T0312)C113.CB) [> 3.3581 = 5.5968 < 7.2758] w=0.0739 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)C113.CB) [> 4.1178 = 6.8631 < 8.9220] w=0.0739 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)Q56.CB) [> 3.5093 = 5.8488 < 7.6034] w=0.0739 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)W138.CB) [> 3.9617 = 6.6028 < 8.5837] w=0.0739 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)V50.CB) [> 4.4285 = 7.3808 < 9.5951] w=0.0739 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)H39.CB) [> 3.6000 = 6.0000 < 7.8000] w=0.0705 to align # Constraint # added constraint: constraint((T0312)R15.CB, (T0312)S41.CB) [> 4.3628 = 7.2713 < 9.4527] w=0.0705 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)V46.CB) [> 3.8749 = 6.4581 < 8.3956] w=0.0705 to align # Constraint # added constraint: constraint((T0312)G44.CA, (T0312)H91.CB) [> 4.4717 = 7.4528 < 9.6886] w=0.0705 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)G77.CA) [> 3.8579 = 6.4297 < 8.3587] w=0.0705 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)I51.CB) [> 4.4360 = 7.3933 < 9.6112] w=0.0696 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)G52.CA) [> 4.0437 = 6.7396 < 8.7614] w=0.0696 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)G52.CA) [> 3.2276 = 5.3793 < 6.9930] w=0.0696 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)L73.CB) [> 3.9752 = 6.6253 < 8.6129] w=0.0696 to align # Constraint # added constraint: constraint((T0312)D55.CB, (T0312)L75.CB) [> 2.7736 = 4.6227 < 6.0096] w=0.0687 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)A112.CB) [> 3.5539 = 5.9231 < 7.7001] w=0.0683 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)G77.CA) [> 3.5019 = 5.8365 < 7.5875] w=0.0671 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)V115.CB) [> 4.3690 = 7.2816 < 9.4661] w=0.0665 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)F116.CB) [> 4.4233 = 7.3721 < 9.5838] w=0.0665 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)V117.CB) [> 3.4099 = 5.6832 < 7.3882] w=0.0665 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)L137.CB) [> 3.2034 = 5.3391 < 6.9408] w=0.0665 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)V115.CB) [> 4.6891 = 7.8152 < 10.1597] w=0.0665 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)F116.CB) [> 3.2311 = 5.3851 < 7.0006] w=0.0665 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)V117.CB) [> 4.6175 = 7.6959 < 10.0047] w=0.0665 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)L137.CB) [> 3.2471 = 5.4119 < 7.0354] w=0.0665 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)C113.CB) [> 3.9483 = 6.5805 < 8.5546] w=0.0665 to align # Constraint # added constraint: constraint((T0312)C88.CB, (T0312)F116.CB) [> 3.6324 = 6.0540 < 7.8702] w=0.0665 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)E114.CB) [> 3.4987 = 5.8311 < 7.5804] w=0.0665 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)F106.CB) [> 3.5951 = 5.9918 < 7.7894] w=0.0665 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)F106.CB) [> 3.8622 = 6.4370 < 8.3681] w=0.0665 to align # Constraint # added constraint: constraint((T0312)P125.CB, (T0312)L139.CB) [> 3.7887 = 6.3145 < 8.2088] w=0.0665 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)E114.CB) [> 4.7233 = 7.8722 < 10.2339] w=0.0665 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)V115.CB) [> 3.3815 = 5.6358 < 7.3265] w=0.0665 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)E114.CB) [> 2.8969 = 4.8282 < 6.2767] w=0.0665 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)F116.CB) [> 3.8128 = 6.3546 < 8.2610] w=0.0665 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)F111.CB) [> 3.0890 = 5.1484 < 6.6929] w=0.0633 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)C113.CB) [> 3.8076 = 6.3460 < 8.2498] w=0.0633 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)V92.CB) [> 4.5368 = 7.5613 < 9.8297] w=0.0616 to align # Constraint # added constraint: constraint((T0312)D55.CB, (T0312)A112.CB) [> 4.1786 = 6.9643 < 9.0536] w=0.0591 to align # Constraint # added constraint: constraint((T0312)Y53.CB, (T0312)L135.CB) [> 2.7999 = 4.6665 < 6.0665] w=0.0591 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)L135.CB) [> 3.5931 = 5.9884 < 7.7850] w=0.0591 to align # Constraint # added constraint: constraint((T0312)R47.CB, (T0312)G122.CA) [> 4.2851 = 7.1418 < 9.2844] w=0.0591 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)S107.CB) [> 4.6765 = 7.7942 < 10.1325] w=0.0591 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)I43.CB) [> 4.6958 = 7.8263 < 10.1742] w=0.0591 to align # Constraint # added constraint: constraint((T0312)Y18.CB, (T0312)S121.CB) [> 4.4350 = 7.3916 < 9.6091] w=0.0591 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)V117.CB) [> 4.5452 = 7.5754 < 9.8480] w=0.0591 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)V117.CB) [> 3.2751 = 5.4585 < 7.0961] w=0.0591 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)F116.CB) [> 2.7348 = 4.5580 < 5.9254] w=0.0591 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)V100.CB) [> 3.2891 = 5.4818 < 7.1263] w=0.0591 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)L120.CB) [> 4.6862 = 7.8104 < 10.1535] w=0.0591 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)G77.CA) [> 3.3142 = 5.5237 < 7.1808] w=0.0578 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)C88.CB) [> 4.4491 = 7.4151 < 9.6397] w=0.0559 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)C88.CB) [> 4.3502 = 7.2502 < 9.4253] w=0.0559 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)A112.CB) [> 4.5735 = 7.6226 < 9.9093] w=0.0552 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)I51.CB) [> 3.4768 = 5.7947 < 7.5331] w=0.0522 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)G52.CA) [> 4.0006 = 6.6677 < 8.6681] w=0.0522 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)G52.CA) [> 3.3108 = 5.5180 < 7.1734] w=0.0522 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)C113.CB) [> 4.5688 = 7.6147 < 9.8992] w=0.0522 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)I90.CB) [> 3.9985 = 6.6642 < 8.6634] w=0.0522 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)H104.CB) [> 2.9993 = 4.9988 < 6.4985] w=0.0522 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)I51.CB) [> 4.2785 = 7.1309 < 9.2702] w=0.0522 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)V50.CB) [> 4.5345 = 7.5575 < 9.8248] w=0.0522 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)I51.CB) [> 3.8214 = 6.3691 < 8.2798] w=0.0522 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)G52.CA) [> 4.5756 = 7.6259 < 9.9137] w=0.0522 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)Y61.CB) [> 3.3714 = 5.6189 < 7.3046] w=0.0522 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)V117.CB) [> 4.2670 = 7.1117 < 9.2452] w=0.0496 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)A112.CB) [> 3.1809 = 5.3014 < 6.8918] w=0.0487 to align # Constraint # added constraint: constraint((T0312)V92.CB, (T0312)V117.CB) [> 4.2243 = 7.0404 < 9.1525] w=0.0475 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)F111.CB) [> 3.4730 = 5.7883 < 7.5248] w=0.0446 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)K82.CB) [> 3.8983 = 6.4972 < 8.4463] w=0.0429 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)V110.CB) [> 2.8061 = 4.6769 < 6.0799] w=0.0422 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)A112.CB) [> 4.2098 = 7.0163 < 9.1212] w=0.0422 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)F111.CB) [> 3.2809 = 5.4682 < 7.1086] w=0.0422 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)V110.CB) [> 4.1657 = 6.9428 < 9.0257] w=0.0422 to align # Constraint # added constraint: constraint((T0312)H91.CB, (T0312)F111.CB) [> 4.3192 = 7.1986 < 9.3582] w=0.0422 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)L75.CB) [> 4.4315 = 7.3858 < 9.6015] w=0.0417 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)S76.CB) [> 4.4284 = 7.3807 < 9.5949] w=0.0417 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)V92.CB) [> 2.9664 = 4.9441 < 6.4273] w=0.0417 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)H91.CB) [> 4.4619 = 7.4365 < 9.6675] w=0.0417 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)H89.CB) [> 3.3188 = 5.5313 < 7.1907] w=0.0417 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)L75.CB) [> 4.4440 = 7.4067 < 9.6286] w=0.0417 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)H89.CB) [> 2.8033 = 4.6721 < 6.0738] w=0.0417 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)C88.CB) [> 4.5049 = 7.5082 < 9.7606] w=0.0417 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)L75.CB) [> 3.0257 = 5.0428 < 6.5556] w=0.0417 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)S76.CB) [> 3.0154 = 5.0257 < 6.5334] w=0.0417 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)H89.CB) [> 4.2332 = 7.0553 < 9.1719] w=0.0417 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)H89.CB) [> 2.9735 = 4.9558 < 6.4425] w=0.0417 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)E114.CB) [> 3.3798 = 5.6330 < 7.3229] w=0.0410 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)C113.CB) [> 4.5268 = 7.5447 < 9.8081] w=0.0410 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)S76.CB) [> 4.4198 = 7.3663 < 9.5762] w=0.0377 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)C88.CB) [> 4.1192 = 6.8654 < 8.9250] w=0.0340 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)I90.CB) [> 4.3522 = 7.2537 < 9.4298] w=0.0340 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)H89.CB) [> 2.6621 = 4.4369 < 5.7680] w=0.0340 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)C88.CB) [> 4.1643 = 6.9406 < 9.0227] w=0.0340 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)H89.CB) [> 4.1628 = 6.9380 < 9.0194] w=0.0295 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)H39.CB) [> 4.5265 = 7.5443 < 9.8075] w=0.0287 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)H89.CB) [> 3.2357 = 5.3928 < 7.0107] w=0.0287 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)H89.CB) [> 4.7453 = 7.9088 < 10.2814] w=0.0287 to align # Constraint # added constraint: constraint((T0312)I26.CB, (T0312)I72.CB) [> 3.0875 = 5.1459 < 6.6896] w=0.0283 to align # Constraint # added constraint: constraint((T0312)S48.CB, (T0312)L73.CB) [> 4.2286 = 7.0477 < 9.1620] w=0.0283 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)V110.CB) [> 3.7625 = 6.2709 < 8.1521] w=0.0276 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)F116.CB) [> 4.3131 = 7.1885 < 9.3450] w=0.0261 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)F106.CB) [> 3.5770 = 5.9616 < 7.7501] w=0.0261 to align # Constraint # added constraint: constraint((T0312)F12.CB, (T0312)Y54.CB) [> 3.3686 = 5.6143 < 7.2986] w=0.0261 to align # Constraint # added constraint: constraint((T0312)G11.CA, (T0312)F106.CB) [> 4.3427 = 7.2378 < 9.4092] w=0.0261 to align # Constraint # added constraint: constraint((T0312)F6.CB, (T0312)A112.CB) [> 3.3395 = 5.5659 < 7.2356] w=0.0261 to align # Constraint # added constraint: constraint((T0312)F6.CB, (T0312)F111.CB) [> 2.3695 = 3.9492 < 5.1339] w=0.0261 to align # Constraint # added constraint: constraint((T0312)F6.CB, (T0312)H89.CB) [> 4.7670 = 7.9450 < 10.3285] w=0.0261 to align # Constraint # added constraint: constraint((T0312)F6.CB, (T0312)C88.CB) [> 3.2296 = 5.3827 < 6.9975] w=0.0261 to align # Constraint # added constraint: constraint((T0312)E5.CB, (T0312)E126.CB) [> 2.9632 = 4.9386 < 6.4202] w=0.0261 to align # Constraint # added constraint: constraint((T0312)F4.CB, (T0312)I51.CB) [> 3.1790 = 5.2984 < 6.8879] w=0.0261 to align # Constraint # added constraint: constraint((T0312)K10.CB, (T0312)S107.CB) [> 3.8752 = 6.4586 < 8.3962] w=0.0261 to align # Constraint # added constraint: constraint((T0312)K10.CB, (T0312)Y54.CB) [> 3.2442 = 5.4070 < 7.0291] w=0.0261 to align # Constraint # added constraint: constraint((T0312)G9.CA, (T0312)F111.CB) [> 3.0521 = 5.0868 < 6.6129] w=0.0261 to align # Constraint # added constraint: constraint((T0312)G9.CA, (T0312)Y54.CB) [> 3.4083 = 5.6805 < 7.3846] w=0.0261 to align # Constraint # added constraint: constraint((T0312)V8.CB, (T0312)F116.CB) [> 3.9233 = 6.5388 < 8.5004] w=0.0261 to align # Constraint # added constraint: constraint((T0312)V8.CB, (T0312)F111.CB) [> 3.2234 = 5.3723 < 6.9840] w=0.0261 to align # Constraint # added constraint: constraint((T0312)V8.CB, (T0312)S107.CB) [> 3.6521 = 6.0869 < 7.9130] w=0.0261 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)V117.CB) [> 4.4054 = 7.3423 < 9.5449] w=0.0261 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)F116.CB) [> 3.4446 = 5.7410 < 7.4632] w=0.0261 to align # Constraint # added constraint: constraint((T0312)G77.CA, (T0312)F111.CB) [> 3.7840 = 6.3066 < 8.1986] w=0.0261 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)V117.CB) [> 2.5154 = 4.1923 < 5.4500] w=0.0261 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)F116.CB) [> 3.8564 = 6.4274 < 8.3556] w=0.0261 to align # Constraint # added constraint: constraint((T0312)S76.CB, (T0312)F111.CB) [> 4.2113 = 7.0189 < 9.1245] w=0.0261 to align # Constraint # added constraint: constraint((T0312)L75.CB, (T0312)V110.CB) [> 4.4426 = 7.4043 < 9.6256] w=0.0261 to align # Constraint # added constraint: constraint((T0312)S74.CB, (T0312)V117.CB) [> 4.0942 = 6.8237 < 8.8708] w=0.0261 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)V110.CB) [> 2.7997 = 4.6662 < 6.0661] w=0.0261 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)C113.CB) [> 3.4187 = 5.6978 < 7.4072] w=0.0261 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)V110.CB) [> 3.3881 = 5.6468 < 7.3409] w=0.0261 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)A112.CB) [> 4.4473 = 7.4121 < 9.6357] w=0.0261 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)V110.CB) [> 4.0823 = 6.8039 < 8.8450] w=0.0261 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)G52.CA) [> 3.4169 = 5.6948 < 7.4033] w=0.0235 to align # Constraint # added constraint: constraint((T0312)K10.CB, (T0312)H39.CB) [> 3.7946 = 6.3243 < 8.2216] w=0.0235 to align # Constraint # added constraint: constraint((T0312)K10.CB, (T0312)A38.CB) [> 2.4879 = 4.1466 < 5.3905] w=0.0235 to align # Constraint # added constraint: constraint((T0312)V8.CB, (T0312)C113.CB) [> 2.6384 = 4.3973 < 5.7165] w=0.0235 to align # Constraint # added constraint: constraint((T0312)H104.CB, (T0312)V117.CB) [> 2.7914 = 4.6524 < 6.0481] w=0.0235 to align # Constraint # added constraint: constraint((T0312)L73.CB, (T0312)A112.CB) [> 3.6477 = 6.0795 < 7.9034] w=0.0235 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)L75.CB) [> 3.1635 = 5.2724 < 6.8541] w=0.0235 to align # Constraint # added constraint: constraint((T0312)V46.CB, (T0312)S76.CB) [> 4.3774 = 7.2958 < 9.4845] w=0.0235 to align # Constraint # added constraint: constraint((T0312)I90.CB, (T0312)E114.CB) [> 4.3909 = 7.3181 < 9.5136] w=0.0211 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)V117.CB) [> 2.7911 = 4.6518 < 6.0474] w=0.0199 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)L93.CB) [> 2.8268 = 4.7114 < 6.1248] w=0.0199 to align # Constraint # added constraint: constraint((T0312)H36.CB, (T0312)L73.CB) [> 4.4883 = 7.4804 < 9.7246] w=0.0199 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)L93.CB) [> 2.6354 = 4.3924 < 5.7101] w=0.0199 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)V115.CB) [> 4.5752 = 7.6254 < 9.9130] w=0.0199 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)F116.CB) [> 4.5737 = 7.6229 < 9.9097] w=0.0199 to align # Constraint # added constraint: constraint((T0312)A37.CB, (T0312)V117.CB) [> 2.6217 = 4.3695 < 5.6803] w=0.0199 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)V92.CB) [> 3.1957 = 5.3261 < 6.9239] w=0.0199 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)E114.CB) [> 4.3003 = 7.1671 < 9.3172] w=0.0199 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)V115.CB) [> 4.2172 = 7.0287 < 9.1373] w=0.0199 to align # Constraint # added constraint: constraint((T0312)A38.CB, (T0312)F116.CB) [> 3.2096 = 5.3493 < 6.9541] w=0.0199 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)E114.CB) [> 4.2241 = 7.0402 < 9.1522] w=0.0199 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)V115.CB) [> 4.0928 = 6.8213 < 8.8676] w=0.0199 to align # Constraint # added constraint: constraint((T0312)L93.CB, (T0312)F116.CB) [> 2.4332 = 4.0553 < 5.2719] w=0.0199 to align # Constraint # added constraint: constraint((T0312)H39.CB, (T0312)V115.CB) [> 2.9086 = 4.8476 < 6.3019] w=0.0199 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)A112.CB) [> 3.7175 = 6.1959 < 8.0546] w=0.0199 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)C113.CB) [> 4.3994 = 7.3324 < 9.5321] w=0.0199 to align # Constraint # added constraint: constraint((T0312)I40.CB, (T0312)E114.CB) [> 3.3813 = 5.6354 < 7.3261] w=0.0199 to align # Constraint # added constraint: constraint((T0312)S41.CB, (T0312)H91.CB) [> 3.8798 = 6.4663 < 8.4061] w=0.0199 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)A112.CB) [> 3.6667 = 6.1112 < 7.9446] w=0.0199 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)A112.CB) [> 3.7175 = 6.1959 < 8.0546] w=0.0199 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)E114.CB) [> 4.4231 = 7.3718 < 9.5834] w=0.0199 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)G77.CA) [> 3.1481 = 5.2468 < 6.8208] w=0.0199 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)E114.CB) [> 4.3003 = 7.1671 < 9.3172] w=0.0199 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)S74.CB) [> 3.2409 = 5.4016 < 7.0220] w=0.0192 to align # Constraint # added constraint: constraint((T0312)I72.CB, (T0312)C88.CB) [> 3.0575 = 5.0958 < 6.6245] w=0.0192 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)H89.CB) [> 4.0578 = 6.7629 < 8.7918] w=0.0141 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)H91.CB) [> 4.6801 = 7.8002 < 10.1403] w=0.0141 to align # Constraint # added constraint: constraint((T0312)A42.CB, (T0312)L93.CB) [> 4.1186 = 6.8644 < 8.9237] w=0.0141 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)H89.CB) [> 4.1244 = 6.8741 < 8.9363] w=0.0141 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)I90.CB) [> 4.1838 = 6.9731 < 9.0650] w=0.0141 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)H91.CB) [> 3.9622 = 6.6036 < 8.5847] w=0.0141 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)V92.CB) [> 3.7395 = 6.2325 < 8.1022] w=0.0141 to align # Constraint # added constraint: constraint((T0312)I43.CB, (T0312)L93.CB) [> 2.2492 = 3.7487 < 4.8733] w=0.0141 to align # Constraint # added constraint: constraint((T0312)L22.CB, (T0312)I90.CB) [> 4.2302 = 7.0503 < 9.1654] w=0.0141 to align # Constraint # added constraint: constraint((T0312)G52.CA, (T0312)L93.CB) [> 4.4333 = 7.3889 < 9.6056] w=0.0141 to align # Constraint # added constraint: constraint((T0312)I51.CB, (T0312)L93.CB) [> 1.9242 = 3.2069 < 4.1690] w=0.0141 to align # Constraint # added constraint: constraint((T0312)V50.CB, (T0312)L93.CB) [> 4.7771 = 7.9618 < 10.3503] w=0.0141 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)L93.CB) [> 3.7493 = 6.2489 < 8.1236] w=0.0141 to align # Constraint # added constraint: constraint((T0312)A49.CB, (T0312)G77.CA) [> 4.2261 = 7.0435 < 9.1565] w=0.0141 to align # Constraint # added constraint: constraint((T0312)H89.CB, (T0312)H104.CB) [> 3.2034 = 5.3391 < 6.9408] w=0.0130 to align # SetCost created cost = # ( 1.0000 * align ) # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/constraints_v3/T0312/ # command:# reading script from file servers-clean.under # Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0312/decoys/ # ReadConformPDB reading from PDB file scrambled-loop.pdb.gz looking for model 1 # choosing archetypes in rotamer library # Found a chain break before 100 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS1 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS2 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS3 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS4 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS5 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS1 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS2 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS3 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS4 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS5 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS1 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS2 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS3 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS4 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS5 # ReadConformPDB reading from PDB file servers/3Dpro_TS1.pdb.gz looking for model 1 # Found a chain break before 54 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS1 # ReadConformPDB reading from PDB file servers/3Dpro_TS2.pdb.gz looking for model 1 # Found a chain break before 70 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS2 # ReadConformPDB reading from PDB file servers/3Dpro_TS3.pdb.gz looking for model 1 # Found a chain break before 118 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS3 # ReadConformPDB reading from PDB file servers/3Dpro_TS4.pdb.gz looking for model 1 # Found a chain break before 109 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS4 # ReadConformPDB reading from PDB file servers/3Dpro_TS5.pdb.gz looking for model 1 # Found a chain break before 118 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS5 # ReadConformPDB reading from PDB file servers/ABIpro_TS1.pdb.gz looking for model 1 # Found a chain break before 118 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS1 # ReadConformPDB reading from PDB file servers/ABIpro_TS2.pdb.gz looking for model 1 # Found a chain break before 109 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS2 # ReadConformPDB reading from PDB file servers/ABIpro_TS3.pdb.gz looking for model 1 # Found a chain break before 140 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS3 # ReadConformPDB reading from PDB file servers/ABIpro_TS4.pdb.gz looking for model 1 # Found a chain break before 107 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS4 # ReadConformPDB reading from PDB file servers/ABIpro_TS5.pdb.gz looking for model 1 # Found a chain break before 128 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS5 # ReadConformPDB reading from PDB file servers/BayesHH_TS1.pdb.gz looking for model 1 # naming current conformation BayesHH_TS1 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS1.pdb.gz looking for model 1 # Found a chain break before 145 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS1 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS2.pdb.gz looking for model 1 # Found a chain break before 145 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS2 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS3.pdb.gz looking for model 1 # Found a chain break before 145 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS3 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS4.pdb.gz looking for model 1 # Found a chain break before 145 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS4 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS5.pdb.gz looking for model 1 # Found a chain break before 145 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS5 # ReadConformPDB reading from PDB file servers/CIRCLE_TS1.pdb.gz looking for model 1 # Found a chain break before 129 # copying to AlignedFragments data structure # naming current conformation CIRCLE_TS1 # ReadConformPDB reading from PDB file servers/CIRCLE_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS2 # ReadConformPDB reading from PDB file servers/CIRCLE_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS3 # ReadConformPDB reading from PDB file servers/CIRCLE_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS4 # ReadConformPDB reading from PDB file servers/CIRCLE_TS5.pdb.gz looking for model 1 # Found a chain break before 134 # copying to AlignedFragments data structure # naming current conformation CIRCLE_TS5 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation CaspIta-FOX_TS1 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS2 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS3 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS4 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS5 # ReadConformPDB reading from PDB file servers/Distill_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Distill_TS1 # ReadConformPDB reading from PDB file servers/Distill_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Distill_TS2 # ReadConformPDB reading from PDB file servers/Distill_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Distill_TS3 # ReadConformPDB reading from PDB file servers/Distill_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Distill_TS4 # ReadConformPDB reading from PDB file servers/Distill_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Distill_TS5 # ReadConformPDB reading from PDB file servers/FAMSD_TS1.pdb.gz looking for model 1 # Found a chain break before 145 # copying to AlignedFragments data structure # naming current conformation FAMSD_TS1 # ReadConformPDB reading from PDB file servers/FAMSD_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FAMSD_TS2 # ReadConformPDB reading from PDB file servers/FAMSD_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FAMSD_TS3 # ReadConformPDB reading from PDB file servers/FAMSD_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FAMSD_TS4 # ReadConformPDB reading from PDB file servers/FAMSD_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FAMSD_TS5 # ReadConformPDB reading from PDB file servers/FAMS_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FAMS_TS1 # ReadConformPDB reading from PDB file servers/FAMS_TS2.pdb.gz looking for model 1 # Found a chain break before 135 # copying to AlignedFragments data structure # naming current conformation FAMS_TS2 # ReadConformPDB reading from PDB file servers/FAMS_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FAMS_TS3 # ReadConformPDB reading from PDB file servers/FAMS_TS4.pdb.gz looking for model 1 # Found a chain break before 133 # copying to AlignedFragments data structure # naming current conformation FAMS_TS4 # ReadConformPDB reading from PDB file servers/FAMS_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FAMS_TS5 # ReadConformPDB reading from PDB file servers/FOLDpro_TS1.pdb.gz looking for model 1 # Found a chain break before 56 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS1 # ReadConformPDB reading from PDB file servers/FOLDpro_TS2.pdb.gz looking for model 1 # Found a chain break before 144 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS2 # ReadConformPDB reading from PDB file servers/FOLDpro_TS3.pdb.gz looking for model 1 # Found a chain break before 54 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS3 # ReadConformPDB reading from PDB file servers/FOLDpro_TS4.pdb.gz looking for model 1 # Found a chain break before 82 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS4 # ReadConformPDB reading from PDB file servers/FOLDpro_TS5.pdb.gz looking for model 1 # Found a chain break before 47 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS5 # ReadConformPDB reading from PDB file servers/FORTE1_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FORTE1_AL1 # ReadConformPDB reading from PDB file servers/FORTE1_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation FORTE1_AL2 # ReadConformPDB reading from PDB file servers/FORTE1_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FORTE1_AL3 # ReadConformPDB reading from PDB file servers/FORTE1_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation FORTE1_AL4 # ReadConformPDB reading from PDB file servers/FORTE1_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation FORTE1_AL5 # ReadConformPDB reading from PDB file servers/FORTE2_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation FORTE2_AL1 # ReadConformPDB reading from PDB file servers/FORTE2_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FORTE2_AL2 # ReadConformPDB reading from PDB file servers/FORTE2_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FORTE2_AL3 # ReadConformPDB reading from PDB file servers/FORTE2_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FORTE2_AL4 # ReadConformPDB reading from PDB file servers/FORTE2_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FORTE2_AL5 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS1.pdb.gz looking for model 1 # Found a chain break before 124 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS1 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS2.pdb.gz looking for model 1 # Found a chain break before 109 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS2 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS3.pdb.gz looking for model 1 # Found a chain break before 89 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS3 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS4.pdb.gz looking for model 1 # Found a chain break before 138 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS4 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS5.pdb.gz looking for model 1 # Found a chain break before 53 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS5 # ReadConformPDB reading from PDB file servers/FUGMOD_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS1 # ReadConformPDB reading from PDB file servers/FUGMOD_TS2.pdb.gz looking for model 1 # naming current conformation FUGMOD_TS2 # ReadConformPDB reading from PDB file servers/FUGMOD_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS3 # ReadConformPDB reading from PDB file servers/FUGMOD_TS4.pdb.gz looking for model 1 # Found a chain break before 89 # copying to AlignedFragments data structure # naming current conformation FUGMOD_TS4 # ReadConformPDB reading from PDB file servers/FUGMOD_TS5.pdb.gz looking for model 1 # Found a chain break before 66 # copying to AlignedFragments data structure # naming current conformation FUGMOD_TS5 # ReadConformPDB reading from PDB file servers/FUGUE_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FUGUE_AL1 # ReadConformPDB reading from PDB file servers/FUGUE_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FUGUE_AL2 # ReadConformPDB reading from PDB file servers/FUGUE_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FUGUE_AL3 # ReadConformPDB reading from PDB file servers/FUGUE_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation FUGUE_AL4 # ReadConformPDB reading from PDB file servers/FUGUE_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation FUGUE_AL5 # ReadConformPDB reading from PDB file servers/FUNCTION_TS1.pdb.gz looking for model 1 # Found a chain break before 133 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS1 # ReadConformPDB reading from PDB file servers/FUNCTION_TS2.pdb.gz looking for model 1 # Found a chain break before 140 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS2 # ReadConformPDB reading from PDB file servers/FUNCTION_TS3.pdb.gz looking for model 1 # Found a chain break before 118 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS3 # ReadConformPDB reading from PDB file servers/FUNCTION_TS4.pdb.gz looking for model 1 # Found a chain break before 135 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS4 # ReadConformPDB reading from PDB file servers/FUNCTION_TS5.pdb.gz looking for model 1 # Found a chain break before 139 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS5 # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS3.pdb.gz looking for model 1 # Found a chain break before 100 # copying to AlignedFragments data structure # naming current conformation GeneSilicoMetaServer_TS3 # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS4.pdb.gz looking for model 1 # Found a chain break before 98 # copying to AlignedFragments data structure # naming current conformation GeneSilicoMetaServer_TS4 # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS5.pdb.gz looking for model 1 # Found a chain break before 112 # copying to AlignedFragments data structure # naming current conformation GeneSilicoMetaServer_TS5 # ReadConformPDB reading from PDB file servers/HHpred1_TS1.pdb.gz looking for model 1 # Found a chain break before 112 # copying to AlignedFragments data structure # naming current conformation HHpred1_TS1 # ReadConformPDB reading from PDB file servers/HHpred2_TS1.pdb.gz looking for model 1 # naming current conformation HHpred2_TS1 # ReadConformPDB reading from PDB file servers/HHpred3_TS1.pdb.gz looking for model 1 # naming current conformation HHpred3_TS1 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS1 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS2 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS3 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS4 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS5 # ReadConformPDB reading from PDB file servers/LOOPP_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation LOOPP_TS1 # ReadConformPDB reading from PDB file servers/LOOPP_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation LOOPP_TS2 # ReadConformPDB reading from PDB file servers/LOOPP_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation LOOPP_TS3 # ReadConformPDB reading from PDB file servers/LOOPP_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation LOOPP_TS4 # ReadConformPDB reading from PDB file servers/LOOPP_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation LOOPP_TS5 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS1.pdb.gz looking for model 1 # Found a chain break before 10 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS1 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS2.pdb.gz looking for model 1 # Found a chain break before 94 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS2 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS3.pdb.gz looking for model 1 # Found a chain break before 84 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS3 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS4.pdb.gz looking for model 1 # Found a chain break before 141 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS4 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS5.pdb.gz looking for model 1 # Found a chain break before 103 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS5 # ReadConformPDB reading from PDB file servers/MetaTasser_TS1.pdb.gz looking for model 1 # Found a chain break before 145 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS1 # ReadConformPDB reading from PDB file servers/MetaTasser_TS2.pdb.gz looking for model 1 # Found a chain break before 132 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS2 # ReadConformPDB reading from PDB file servers/MetaTasser_TS3.pdb.gz looking for model 1 # Found a chain break before 130 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS3 # ReadConformPDB reading from PDB file servers/MetaTasser_TS4.pdb.gz looking for model 1 # Found a chain break before 144 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS4 # ReadConformPDB reading from PDB file servers/MetaTasser_TS5.pdb.gz looking for model 1 # Found a chain break before 145 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS5 # ReadConformPDB reading from PDB file servers/NN_PUT_lab_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation NN_PUT_lab_TS1 # ReadConformPDB reading from PDB file servers/POMYSL_TS1.pdb.gz looking for model 1 # Found a chain break before 139 # copying to AlignedFragments data structure # naming current conformation POMYSL_TS1 # ReadConformPDB reading from PDB file servers/POMYSL_TS2.pdb.gz looking for model 1 # Found a chain break before 132 # copying to AlignedFragments data structure # naming current conformation POMYSL_TS2 # ReadConformPDB reading from PDB file servers/POMYSL_TS3.pdb.gz looking for model 1 # Found a chain break before 140 # copying to AlignedFragments data structure # naming current conformation POMYSL_TS3 # ReadConformPDB reading from PDB file servers/POMYSL_TS4.pdb.gz looking for model 1 # Found a chain break before 115 # copying to AlignedFragments data structure # naming current conformation POMYSL_TS4 # ReadConformPDB reading from PDB file servers/POMYSL_TS5.pdb.gz looking for model 1 # Found a chain break before 106 # copying to AlignedFragments data structure # naming current conformation POMYSL_TS5 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS1.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS1 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS2.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS2 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS3.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS3 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS4.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS4 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS5.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS5 # ReadConformPDB reading from PDB file servers/PROTINFO_TS1.pdb.gz looking for model 1 # Found a chain break before 85 # copying to AlignedFragments data structure # naming current conformation PROTINFO_TS1 # ReadConformPDB reading from PDB file servers/PROTINFO_TS2.pdb.gz looking for model 1 # naming current conformation PROTINFO_TS2 # ReadConformPDB reading from PDB file servers/PROTINFO_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation PROTINFO_TS3 # ReadConformPDB reading from PDB file servers/PROTINFO_TS4.pdb.gz looking for model 1 # naming current conformation PROTINFO_TS4 # ReadConformPDB reading from PDB file servers/PROTINFO_TS5.pdb.gz looking for model 1 # Found a chain break before 90 # copying to AlignedFragments data structure # naming current conformation PROTINFO_TS5 # ReadConformPDB reading from PDB file servers/Pcons6_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Pcons6_TS1 # ReadConformPDB reading from PDB file servers/Pcons6_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Pcons6_TS2 # ReadConformPDB reading from PDB file servers/Pcons6_TS3.pdb.gz looking for model 1 # Found a chain break before 128 # copying to AlignedFragments data structure # naming current conformation Pcons6_TS3 # ReadConformPDB reading from PDB file servers/Pcons6_TS4.pdb.gz looking for model 1 # Found a chain break before 82 # copying to AlignedFragments data structure # naming current conformation Pcons6_TS4 # ReadConformPDB reading from PDB file servers/Pcons6_TS5.pdb.gz looking for model 1 # Found a chain break before 131 # copying to AlignedFragments data structure # naming current conformation Pcons6_TS5 # ReadConformPDB reading from PDB file servers/Phyre-1_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Phyre-1_TS1 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS1.pdb.gz looking for model 1 # Found a chain break before 128 # copying to AlignedFragments data structure # naming current conformation Pmodeller6_TS1 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS2.pdb.gz looking for model 1 # Found a chain break before 124 # copying to AlignedFragments data structure # naming current conformation Pmodeller6_TS2 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS3.pdb.gz looking for model 1 # Found a chain break before 131 # copying to AlignedFragments data structure # naming current conformation Pmodeller6_TS3 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS4.pdb.gz looking for model 1 # Found a chain break before 120 # copying to AlignedFragments data structure # naming current conformation Pmodeller6_TS4 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS5 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS1.pdb.gz looking for model 1 # Found a chain break before 102 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS1 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS2.pdb.gz looking for model 1 # Found a chain break before 68 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS2 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS3.pdb.gz looking for model 1 # Found a chain break before 78 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS3 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS4.pdb.gz looking for model 1 # Found a chain break before 105 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS4 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS5.pdb.gz looking for model 1 # Found a chain break before 139 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS5 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS1.pdb.gz looking for model 1 # Found a chain break before 124 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS1 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS2.pdb.gz looking for model 1 # Found a chain break before 124 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS2 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS3.pdb.gz looking for model 1 # Found a chain break before 21 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS3 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS4.pdb.gz looking for model 1 # Found a chain break before 122 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS4 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS5.pdb.gz looking for model 1 # Found a chain break before 124 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS5 # ReadConformPDB reading from PDB file servers/RAPTOR_TS1.pdb.gz looking for model 1 # naming current conformation RAPTOR_TS1 # ReadConformPDB reading from PDB file servers/RAPTOR_TS2.pdb.gz looking for model 1 # naming current conformation RAPTOR_TS2 # ReadConformPDB reading from PDB file servers/RAPTOR_TS3.pdb.gz looking for model 1 # Found a chain break before 136 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS3 # ReadConformPDB reading from PDB file servers/RAPTOR_TS4.pdb.gz looking for model 1 # Found a chain break before 122 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS4 # ReadConformPDB reading from PDB file servers/RAPTOR_TS5.pdb.gz looking for model 1 # Found a chain break before 124 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS5 # ReadConformPDB reading from PDB file servers/ROBETTA_TS1.pdb.gz looking for model 1 # Found a chain break before 128 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS1 # ReadConformPDB reading from PDB file servers/ROBETTA_TS2.pdb.gz looking for model 1 # naming current conformation ROBETTA_TS2 # ReadConformPDB reading from PDB file servers/ROBETTA_TS3.pdb.gz looking for model 1 # Found a chain break before 135 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS3 # ReadConformPDB reading from PDB file servers/ROBETTA_TS4.pdb.gz looking for model 1 # Found a chain break before 62 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS4 # ReadConformPDB reading from PDB file servers/ROBETTA_TS5.pdb.gz looking for model 1 # Found a chain break before 124 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS5 # ReadConformPDB reading from PDB file servers/ROKKY_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation ROKKY_TS1 # ReadConformPDB reading from PDB file servers/ROKKY_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation ROKKY_TS2 # ReadConformPDB reading from PDB file servers/ROKKY_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation ROKKY_TS3 # ReadConformPDB reading from PDB file servers/ROKKY_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation ROKKY_TS4 # ReadConformPDB reading from PDB file servers/ROKKY_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation ROKKY_TS5 # ReadConformPDB reading from PDB file servers/SAM-T02_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL1 # ReadConformPDB reading from PDB file servers/SAM-T02_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL2 # ReadConformPDB reading from PDB file servers/SAM-T02_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL3 # ReadConformPDB reading from PDB file servers/SAM-T02_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL4 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS1.pdb.gz looking for model 1 # Found a chain break before 144 # copying to AlignedFragments data structure # naming current conformation SAM_T06_server_TS1 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS2 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS3 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS4 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS5 # ReadConformPDB reading from PDB file servers/SP3_TS1.pdb.gz looking for model 1 # Found a chain break before 120 # copying to AlignedFragments data structure # naming current conformation SP3_TS1 # ReadConformPDB reading from PDB file servers/SP3_TS2.pdb.gz looking for model 1 # Found a chain break before 113 # copying to AlignedFragments data structure # naming current conformation SP3_TS2 # ReadConformPDB reading from PDB file servers/SP3_TS3.pdb.gz looking for model 1 # Found a chain break before 68 # copying to AlignedFragments data structure # naming current conformation SP3_TS3 # ReadConformPDB reading from PDB file servers/SP3_TS4.pdb.gz looking for model 1 # Found a chain break before 36 # copying to AlignedFragments data structure # naming current conformation SP3_TS4 # ReadConformPDB reading from PDB file servers/SP3_TS5.pdb.gz looking for model 1 # Found a chain break before 63 # copying to AlignedFragments data structure # naming current conformation SP3_TS5 # ReadConformPDB reading from PDB file servers/SP4_TS1.pdb.gz looking for model 1 # Found a chain break before 134 # copying to AlignedFragments data structure # naming current conformation SP4_TS1 # ReadConformPDB reading from PDB file servers/SP4_TS2.pdb.gz looking for model 1 # naming current conformation SP4_TS2 # ReadConformPDB reading from PDB file servers/SP4_TS3.pdb.gz looking for model 1 # Found a chain break before 56 # copying to AlignedFragments data structure # naming current conformation SP4_TS3 # ReadConformPDB reading from PDB file servers/SP4_TS4.pdb.gz looking for model 1 # Found a chain break before 108 # copying to AlignedFragments data structure # naming current conformation SP4_TS4 # ReadConformPDB reading from PDB file servers/SP4_TS5.pdb.gz looking for model 1 # naming current conformation SP4_TS5 # ReadConformPDB reading from PDB file servers/SPARKS2_TS1.pdb.gz looking for model 1 # Found a chain break before 65 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS1 # ReadConformPDB reading from PDB file servers/SPARKS2_TS2.pdb.gz looking for model 1 # Found a chain break before 117 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS2 # ReadConformPDB reading from PDB file servers/SPARKS2_TS3.pdb.gz looking for model 1 # Found a chain break before 113 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS3 # ReadConformPDB reading from PDB file servers/SPARKS2_TS4.pdb.gz looking for model 1 # Found a chain break before 139 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS4 # ReadConformPDB reading from PDB file servers/SPARKS2_TS5.pdb.gz looking for model 1 # Found a chain break before 130 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS5 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS1 # ReadConformPDB reading from PDB file servers/UNI-EID_expm_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation UNI-EID_expm_TS1 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL1 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS1.pdb.gz looking for model 1 # Found a chain break before 137 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS1 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS2.pdb.gz looking for model 1 # Found a chain break before 145 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS2 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS3.pdb.gz looking for model 1 # Found a chain break before 126 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS3 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS4.pdb.gz looking for model 1 # Found a chain break before 139 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS4 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS5.pdb.gz looking for model 1 # Found a chain break before 143 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS5 # ReadConformPDB reading from PDB file servers/beautshot_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation beautshot_TS1 # ReadConformPDB reading from PDB file servers/beautshotbase_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation beautshotbase_TS1 # ReadConformPDB reading from PDB file servers/forecast-s_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation forecast-s_AL1 # ReadConformPDB reading from PDB file servers/forecast-s_AL2.pdb.gz looking for model 1 Skipped atom 207, because occupancy 1 <= existing 1.000 in servers/forecast-s_AL2.pdb.gz # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation forecast-s_AL2 # ReadConformPDB reading from PDB file servers/forecast-s_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation forecast-s_AL3 # ReadConformPDB reading from PDB file servers/forecast-s_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation forecast-s_AL4 # ReadConformPDB reading from PDB file servers/forecast-s_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation forecast-s_AL5 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS1.pdb.gz looking for model 1 # naming current conformation karypis.srv.2_TS1 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS2.pdb.gz looking for model 1 # Found a chain break before 111 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS2 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS3.pdb.gz looking for model 1 # Found a chain break before 74 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS3 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS4.pdb.gz looking for model 1 # Found a chain break before 28 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS4 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS5.pdb.gz looking for model 1 # Found a chain break before 99 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS5 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS1.pdb.gz looking for model 1 # Found a chain break before 143 # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS1 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS2.pdb.gz looking for model 1 # Found a chain break before 145 # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS2 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS3.pdb.gz looking for model 1 WARNING: atoms too close: (T0312)L66.O and (T0312)M67.N only 0.000 apart, marking (T0312)M67.N as missing # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS3 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS4.pdb.gz looking for model 1 WARNING: atoms too close: (T0312)E131.O and (T0312)Q132.N only 0.000 apart, marking (T0312)Q132.N as missing # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS4 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS5.pdb.gz looking for model 1 # Found a chain break before 143 # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS5 # ReadConformPDB reading from PDB file servers/karypis.srv_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS1 # ReadConformPDB reading from PDB file servers/karypis.srv_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS2 # ReadConformPDB reading from PDB file servers/karypis.srv_TS3.pdb.gz looking for model 1 # Found a chain break before 48 # copying to AlignedFragments data structure # naming current conformation karypis.srv_TS3 # ReadConformPDB reading from PDB file servers/karypis.srv_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS4 # ReadConformPDB reading from PDB file servers/karypis.srv_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS5 # ReadConformPDB reading from PDB file servers/keasar-server_TS1.pdb.gz looking for model 1 # Found a chain break before 139 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS1 # ReadConformPDB reading from PDB file servers/keasar-server_TS2.pdb.gz looking for model 1 # Found a chain break before 105 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS2 # ReadConformPDB reading from PDB file servers/keasar-server_TS3.pdb.gz looking for model 1 # Found a chain break before 131 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS3 # ReadConformPDB reading from PDB file servers/keasar-server_TS4.pdb.gz looking for model 1 # Found a chain break before 140 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS4 # ReadConformPDB reading from PDB file servers/keasar-server_TS5.pdb.gz looking for model 1 # Found a chain break before 116 # copying to AlignedFragments data structure # naming current conformation keasar-server_TS5 # ReadConformPDB reading from PDB file servers/mGen-3D_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation mGen-3D_TS1 # ReadConformPDB reading from PDB file servers/nFOLD_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation nFOLD_TS1 # ReadConformPDB reading from PDB file servers/nFOLD_TS2.pdb.gz looking for model 1 WARNING: atom 1 has residue number 1 < previous residue 138 in servers/nFOLD_TS2.pdb.gz # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation nFOLD_TS2 # ReadConformPDB reading from PDB file servers/nFOLD_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation nFOLD_TS3 # ReadConformPDB reading from PDB file servers/nFOLD_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation nFOLD_TS4 # ReadConformPDB reading from PDB file servers/nFOLD_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation nFOLD_TS5 # ReadConformPDB reading from PDB file servers/panther2_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation panther2_TS1 # ReadConformPDB reading from PDB file servers/shub_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0312 can't currently be optimized by undertaker # naming current conformation shub_TS1 # command:Using radius: 8.0000 Metaserver mode NUMB_ALIGNS: 237 model score 0.9541 model score 1.7908 model score 1.7992 model score 1.7637 model score 1.7741 model score 1.7526 model score 1.2545 model score 1.4211 model score 1.6820 model score 1.6671 model score 1.9234 model score 1.3391 model score 2.4066 model score 1.9169 model score 2.2849 model score 2.3772 model score 1.5601 model score 1.9004 model score 1.3861 model score 1.1338 model score 1.7967 model score 1.3861 model score 1.1338 model score 1.0644 model score 1.3464 model score 1.4357 model score 2.2865 model score 1.6716 model score 1.5536 model score 1.5916 model score 1.6667 model score 1.5652 model score 1.7036 model score 0.9308 model score 0.6926 model score 0.8859 model score 1.6835 model score 0.9815 model score 1.9148 model score 1.7897 model score 1.6061 model score 1.4720 model score 1.2743 model score 1.2715 model score 1.2729 model score 1.2761 model score 1.2747 model score 0.7011 model score 0.8859 model score 1.2379 model score 1.5880 model score 1.1696 model score 0.8859 model score 2.0982 model score 0.8859 model score 1.6245 model score 0.6926 model score 1.3320 model score 2.1828 model score 1.5601 model score 1.7356 model score 1.7866 model score 1.2806 model score 1.2704 model score 1.2805 model score 1.2808 model score 1.2831 model score 1.2704 model score 1.2808 model score 1.2817 model score 1.2808 model score 1.2805 model score 2.1573 model score 2.2545 model score 2.1702 model score 2.0948 model score 2.1658 model score 1.8198 model score 2.0795 model score 1.1554 model score 1.9703 model score 2.2178 model score 1.2791 model score 1.2797 model score 1.2771 model score 1.2818 model score 1.2777 model score 1.6245 model score 1.7402 model score 1.9725 model score 1.7847 model score 1.4738 model score 1.7882 model score 1.6227 model score 1.8454 model score 1.6655 model score 1.0720 model score 1.6929 model score 1.5198 model score 1.6340 model score 1.6031 model score 1.2505 model score 1.2771 model score 1.7806 model score 1.9957 model score 1.5999 model score 1.7826 model score 1.6144 model score 1.4184 model score 1.5008 model score 0.9081 model score 1.4831 model score 1.6474 model score 1.2133 model score 1.1651 model score 1.2658 model score 1.1482 model score 1.1763 model score 1.7806 model score 2.2450 model score 1.8338 model score 2.1121 model score 1.7814 model score 2.0840 model score 1.3582 model score 1.3564 model score 1.3406 model score 1.3492 model score 1.3457 model score 1.3534 model score 1.3564 model score 1.2856 model score 1.3413 model score 1.6054 model score 0.9226 model score 0.9155 model score 0.5810 model score 1.2066 model score 0.9513 model score 0.8160 model score 0.5810 model score 1.0508 model score 0.9513 model score 0.7747 model score 0.9226 model score 1.7361 model score 1.8301 model score 1.6758 model score 1.8335 model score 2.1437 model score 1.3765 model score 1.5557 model score 1.7490 model score 1.8131 model score 1.4042 model score 1.3421 model score 1.5731 model score 1.7468 model score 1.8023 model score 1.3869 model score 0.5810 model score 1.3408 model score 0.6173 model score 1.3007 model score 1.0508 model score 1.2812 model score 1.2841 model score 1.2815 model score 1.2836 model score 1.2840 model score 1.2736 model score 1.2771 model score 1.2771 model score 1.2771 model score 0.5181 model score 0.5536 model score 1.1710 model score 1.1722 model score 1.4084 model score 1.4749 model score 1.8671 model score 2.2411 model score 1.5598 model score 1.5324 model score 1.7075 model score 1.6451 model score 0.7058 model score 1.7845 model score 1.5723 model score 1.7446 model score 1.5589 model score 1.8648 model score 1.9004 model score 1.4147 model score 1.2729 model score 0.9855 model score 1.2712 model score 0.9430 model score 1.1383 model score 1.0445 model score 1.0250 model score 0.6049 model score 1.5906 model score 1.5339 model score 1.2854 model score 1.2807 model score 1.2807 model score 1.2771 model score 1.2836 model score 1.6614 model score 1.6193 model score 1.6713 model score 1.9430 model score 1.4036 model score 1.9850 model score 2.1356 model score 1.9452 model score 2.2303 model score 2.1375 model score 1.6001 model score 1.5841 model score 1.8586 model score 1.8844 model score 1.6782 model score 0.8609 model score 1.2587 model score 2.1186 model score 1.0376 model score 1.7666 model score 1.2521 model score 1.7972 model score 1.4155 model score 1.7975 model score 1.7972 model score 1.7972 model score 1.3286 model score 1.5207 weight: 0.7922 eval: 0.9541 min: 0.5181 max: 2.4066 weight: 0.3934 eval: 1.7908 min: 0.5181 max: 2.4066 weight: 0.3895 eval: 1.7992 min: 0.5181 max: 2.4066 weight: 0.4064 eval: 1.7637 min: 0.5181 max: 2.4066 weight: 0.4014 eval: 1.7741 min: 0.5181 max: 2.4066 weight: 0.4117 eval: 1.7526 min: 0.5181 max: 2.4066 weight: 0.6490 eval: 1.2545 min: 0.5181 max: 2.4066 weight: 0.5697 eval: 1.4211 min: 0.5181 max: 2.4066 weight: 0.4453 eval: 1.6820 min: 0.5181 max: 2.4066 weight: 0.4524 eval: 1.6671 min: 0.5181 max: 2.4066 weight: 0.3303 eval: 1.9234 min: 0.5181 max: 2.4066 weight: 0.6087 eval: 1.3391 min: 0.5181 max: 2.4066 weight: 0.1000 eval: 2.4066 min: 0.5181 max: 2.4066 weight: 0.3334 eval: 1.9169 min: 0.5181 max: 2.4066 weight: 0.1580 eval: 2.2849 min: 0.5181 max: 2.4066 weight: 0.1140 eval: 2.3772 min: 0.5181 max: 2.4066 weight: 0.5034 eval: 1.5601 min: 0.5181 max: 2.4066 weight: 0.3412 eval: 1.9004 min: 0.5181 max: 2.4066 weight: 0.5863 eval: 1.3861 min: 0.5181 max: 2.4066 weight: 0.7065 eval: 1.1338 min: 0.5181 max: 2.4066 weight: 0.3906 eval: 1.7967 min: 0.5181 max: 2.4066 weight: 0.5863 eval: 1.3861 min: 0.5181 max: 2.4066 weight: 0.7065 eval: 1.1338 min: 0.5181 max: 2.4066 weight: 0.7396 eval: 1.0644 min: 0.5181 max: 2.4066 weight: 0.6052 eval: 1.3464 min: 0.5181 max: 2.4066 weight: 0.5627 eval: 1.4357 min: 0.5181 max: 2.4066 weight: 0.1572 eval: 2.2865 min: 0.5181 max: 2.4066 weight: 0.4503 eval: 1.6716 min: 0.5181 max: 2.4066 weight: 0.5065 eval: 1.5536 min: 0.5181 max: 2.4066 weight: 0.4884 eval: 1.5916 min: 0.5181 max: 2.4066 weight: 0.4526 eval: 1.6667 min: 0.5181 max: 2.4066 weight: 0.5010 eval: 1.5652 min: 0.5181 max: 2.4066 weight: 0.4350 eval: 1.7036 min: 0.5181 max: 2.4066 weight: 0.8033 eval: 0.9308 min: 0.5181 max: 2.4066 weight: 0.9168 eval: 0.6926 min: 0.5181 max: 2.4066 weight: 0.8247 eval: 0.8859 min: 0.5181 max: 2.4066 weight: 0.4446 eval: 1.6835 min: 0.5181 max: 2.4066 weight: 0.7791 eval: 0.9815 min: 0.5181 max: 2.4066 weight: 0.3343 eval: 1.9148 min: 0.5181 max: 2.4066 weight: 0.3940 eval: 1.7897 min: 0.5181 max: 2.4066 weight: 0.4815 eval: 1.6061 min: 0.5181 max: 2.4066 weight: 0.5454 eval: 1.4720 min: 0.5181 max: 2.4066 weight: 0.6396 eval: 1.2743 min: 0.5181 max: 2.4066 weight: 0.6410 eval: 1.2715 min: 0.5181 max: 2.4066 weight: 0.6403 eval: 1.2729 min: 0.5181 max: 2.4066 weight: 0.6388 eval: 1.2761 min: 0.5181 max: 2.4066 weight: 0.6394 eval: 1.2747 min: 0.5181 max: 2.4066 weight: 0.9128 eval: 0.7011 min: 0.5181 max: 2.4066 weight: 0.8247 eval: 0.8859 min: 0.5181 max: 2.4066 weight: 0.6569 eval: 1.2379 min: 0.5181 max: 2.4066 weight: 0.4901 eval: 1.5880 min: 0.5181 max: 2.4066 weight: 0.6895 eval: 1.1696 min: 0.5181 max: 2.4066 weight: 0.8247 eval: 0.8859 min: 0.5181 max: 2.4066 weight: 0.2470 eval: 2.0982 min: 0.5181 max: 2.4066 weight: 0.8247 eval: 0.8859 min: 0.5181 max: 2.4066 weight: 0.4727 eval: 1.6245 min: 0.5181 max: 2.4066 weight: 0.9168 eval: 0.6926 min: 0.5181 max: 2.4066 weight: 0.6121 eval: 1.3320 min: 0.5181 max: 2.4066 weight: 0.2067 eval: 2.1828 min: 0.5181 max: 2.4066 weight: 0.5034 eval: 1.5601 min: 0.5181 max: 2.4066 weight: 0.4197 eval: 1.7356 min: 0.5181 max: 2.4066 weight: 0.3955 eval: 1.7866 min: 0.5181 max: 2.4066 weight: 0.6366 eval: 1.2806 min: 0.5181 max: 2.4066 weight: 0.6415 eval: 1.2704 min: 0.5181 max: 2.4066 weight: 0.6366 eval: 1.2805 min: 0.5181 max: 2.4066 weight: 0.6365 eval: 1.2808 min: 0.5181 max: 2.4066 weight: 0.6354 eval: 1.2831 min: 0.5181 max: 2.4066 weight: 0.6415 eval: 1.2704 min: 0.5181 max: 2.4066 weight: 0.6365 eval: 1.2808 min: 0.5181 max: 2.4066 weight: 0.6361 eval: 1.2817 min: 0.5181 max: 2.4066 weight: 0.6365 eval: 1.2808 min: 0.5181 max: 2.4066 weight: 0.6366 eval: 1.2805 min: 0.5181 max: 2.4066 weight: 0.2188 eval: 2.1573 min: 0.5181 max: 2.4066 weight: 0.1724 eval: 2.2545 min: 0.5181 max: 2.4066 weight: 0.2127 eval: 2.1702 min: 0.5181 max: 2.4066 weight: 0.2486 eval: 2.0948 min: 0.5181 max: 2.4066 weight: 0.2147 eval: 2.1658 min: 0.5181 max: 2.4066 weight: 0.3797 eval: 1.8198 min: 0.5181 max: 2.4066 weight: 0.2559 eval: 2.0795 min: 0.5181 max: 2.4066 weight: 0.6963 eval: 1.1554 min: 0.5181 max: 2.4066 weight: 0.3079 eval: 1.9703 min: 0.5181 max: 2.4066 weight: 0.1900 eval: 2.2178 min: 0.5181 max: 2.4066 weight: 0.6373 eval: 1.2791 min: 0.5181 max: 2.4066 weight: 0.6370 eval: 1.2797 min: 0.5181 max: 2.4066 weight: 0.6383 eval: 1.2771 min: 0.5181 max: 2.4066 weight: 0.6360 eval: 1.2818 min: 0.5181 max: 2.4066 weight: 0.6380 eval: 1.2777 min: 0.5181 max: 2.4066 weight: 0.4727 eval: 1.6245 min: 0.5181 max: 2.4066 weight: 0.4176 eval: 1.7402 min: 0.5181 max: 2.4066 weight: 0.3069 eval: 1.9725 min: 0.5181 max: 2.4066 weight: 0.3964 eval: 1.7847 min: 0.5181 max: 2.4066 weight: 0.5445 eval: 1.4738 min: 0.5181 max: 2.4066 weight: 0.3947 eval: 1.7882 min: 0.5181 max: 2.4066 weight: 0.4735 eval: 1.6227 min: 0.5181 max: 2.4066 weight: 0.3674 eval: 1.8454 min: 0.5181 max: 2.4066 weight: 0.4532 eval: 1.6655 min: 0.5181 max: 2.4066 weight: 0.7360 eval: 1.0720 min: 0.5181 max: 2.4066 weight: 0.4401 eval: 1.6929 min: 0.5181 max: 2.4066 weight: 0.5226 eval: 1.5198 min: 0.5181 max: 2.4066 weight: 0.4682 eval: 1.6340 min: 0.5181 max: 2.4066 weight: 0.4829 eval: 1.6031 min: 0.5181 max: 2.4066 weight: 0.6509 eval: 1.2505 min: 0.5181 max: 2.4066 weight: 0.6383 eval: 1.2771 min: 0.5181 max: 2.4066 weight: 0.3983 eval: 1.7806 min: 0.5181 max: 2.4066 weight: 0.2958 eval: 1.9957 min: 0.5181 max: 2.4066 weight: 0.4844 eval: 1.5999 min: 0.5181 max: 2.4066 weight: 0.3974 eval: 1.7826 min: 0.5181 max: 2.4066 weight: 0.4775 eval: 1.6144 min: 0.5181 max: 2.4066 weight: 0.5709 eval: 1.4184 min: 0.5181 max: 2.4066 weight: 0.5317 eval: 1.5008 min: 0.5181 max: 2.4066 weight: 0.8141 eval: 0.9081 min: 0.5181 max: 2.4066 weight: 0.5401 eval: 1.4831 min: 0.5181 max: 2.4066 weight: 0.4618 eval: 1.6474 min: 0.5181 max: 2.4066 weight: 0.6686 eval: 1.2133 min: 0.5181 max: 2.4066 weight: 0.6916 eval: 1.1651 min: 0.5181 max: 2.4066 weight: 0.6436 eval: 1.2658 min: 0.5181 max: 2.4066 weight: 0.6997 eval: 1.1482 min: 0.5181 max: 2.4066 weight: 0.6863 eval: 1.1763 min: 0.5181 max: 2.4066 weight: 0.3983 eval: 1.7806 min: 0.5181 max: 2.4066 weight: 0.1770 eval: 2.2450 min: 0.5181 max: 2.4066 weight: 0.3729 eval: 1.8338 min: 0.5181 max: 2.4066 weight: 0.2403 eval: 2.1121 min: 0.5181 max: 2.4066 weight: 0.3979 eval: 1.7814 min: 0.5181 max: 2.4066 weight: 0.2537 eval: 2.0840 min: 0.5181 max: 2.4066 weight: 0.5996 eval: 1.3582 min: 0.5181 max: 2.4066 weight: 0.6005 eval: 1.3564 min: 0.5181 max: 2.4066 weight: 0.6080 eval: 1.3406 min: 0.5181 max: 2.4066 weight: 0.6039 eval: 1.3492 min: 0.5181 max: 2.4066 weight: 0.6056 eval: 1.3457 min: 0.5181 max: 2.4066 weight: 0.6019 eval: 1.3534 min: 0.5181 max: 2.4066 weight: 0.6005 eval: 1.3564 min: 0.5181 max: 2.4066 weight: 0.6342 eval: 1.2856 min: 0.5181 max: 2.4066 weight: 0.6077 eval: 1.3413 min: 0.5181 max: 2.4066 weight: 0.4818 eval: 1.6054 min: 0.5181 max: 2.4066 weight: 0.8072 eval: 0.9226 min: 0.5181 max: 2.4066 weight: 0.8106 eval: 0.9155 min: 0.5181 max: 2.4066 weight: 0.9700 eval: 0.5810 min: 0.5181 max: 2.4066 weight: 0.6719 eval: 1.2066 min: 0.5181 max: 2.4066 weight: 0.7935 eval: 0.9513 min: 0.5181 max: 2.4066 weight: 0.8580 eval: 0.8160 min: 0.5181 max: 2.4066 weight: 0.9700 eval: 0.5810 min: 0.5181 max: 2.4066 weight: 0.7461 eval: 1.0508 min: 0.5181 max: 2.4066 weight: 0.7935 eval: 0.9513 min: 0.5181 max: 2.4066 weight: 0.8777 eval: 0.7747 min: 0.5181 max: 2.4066 weight: 0.8072 eval: 0.9226 min: 0.5181 max: 2.4066 weight: 0.4195 eval: 1.7361 min: 0.5181 max: 2.4066 weight: 0.3747 eval: 1.8301 min: 0.5181 max: 2.4066 weight: 0.4483 eval: 1.6758 min: 0.5181 max: 2.4066 weight: 0.3731 eval: 1.8335 min: 0.5181 max: 2.4066 weight: 0.2253 eval: 2.1437 min: 0.5181 max: 2.4066 weight: 0.5909 eval: 1.3765 min: 0.5181 max: 2.4066 weight: 0.5055 eval: 1.5557 min: 0.5181 max: 2.4066 weight: 0.4134 eval: 1.7490 min: 0.5181 max: 2.4066 weight: 0.3828 eval: 1.8131 min: 0.5181 max: 2.4066 weight: 0.5777 eval: 1.4042 min: 0.5181 max: 2.4066 weight: 0.6073 eval: 1.3421 min: 0.5181 max: 2.4066 weight: 0.4972 eval: 1.5731 min: 0.5181 max: 2.4066 weight: 0.4144 eval: 1.7468 min: 0.5181 max: 2.4066 weight: 0.3880 eval: 1.8023 min: 0.5181 max: 2.4066 weight: 0.5859 eval: 1.3869 min: 0.5181 max: 2.4066 weight: 0.9700 eval: 0.5810 min: 0.5181 max: 2.4066 weight: 0.6079 eval: 1.3408 min: 0.5181 max: 2.4066 weight: 0.9527 eval: 0.6173 min: 0.5181 max: 2.4066 weight: 0.6270 eval: 1.3007 min: 0.5181 max: 2.4066 weight: 0.7461 eval: 1.0508 min: 0.5181 max: 2.4066 weight: 0.6363 eval: 1.2812 min: 0.5181 max: 2.4066 weight: 0.6349 eval: 1.2841 min: 0.5181 max: 2.4066 weight: 0.6362 eval: 1.2815 min: 0.5181 max: 2.4066 weight: 0.6352 eval: 1.2836 min: 0.5181 max: 2.4066 weight: 0.6350 eval: 1.2840 min: 0.5181 max: 2.4066 weight: 0.6399 eval: 1.2736 min: 0.5181 max: 2.4066 weight: 0.6383 eval: 1.2771 min: 0.5181 max: 2.4066 weight: 0.6383 eval: 1.2771 min: 0.5181 max: 2.4066 weight: 0.6383 eval: 1.2771 min: 0.5181 max: 2.4066 weight: 1.0000 eval: 0.5181 min: 0.5181 max: 2.4066 weight: 0.9831 eval: 0.5536 min: 0.5181 max: 2.4066 weight: 0.6888 eval: 1.1710 min: 0.5181 max: 2.4066 weight: 0.6883 eval: 1.1722 min: 0.5181 max: 2.4066 weight: 0.5757 eval: 1.4084 min: 0.5181 max: 2.4066 weight: 0.5440 eval: 1.4749 min: 0.5181 max: 2.4066 weight: 0.3571 eval: 1.8671 min: 0.5181 max: 2.4066 weight: 0.1789 eval: 2.2411 min: 0.5181 max: 2.4066 weight: 0.5035 eval: 1.5598 min: 0.5181 max: 2.4066 weight: 0.5166 eval: 1.5324 min: 0.5181 max: 2.4066 weight: 0.4332 eval: 1.7075 min: 0.5181 max: 2.4066 weight: 0.4629 eval: 1.6451 min: 0.5181 max: 2.4066 weight: 0.9105 eval: 0.7058 min: 0.5181 max: 2.4066 weight: 0.3965 eval: 1.7845 min: 0.5181 max: 2.4066 weight: 0.4976 eval: 1.5723 min: 0.5181 max: 2.4066 weight: 0.4155 eval: 1.7446 min: 0.5181 max: 2.4066 weight: 0.5040 eval: 1.5589 min: 0.5181 max: 2.4066 weight: 0.3582 eval: 1.8648 min: 0.5181 max: 2.4066 weight: 0.3412 eval: 1.9004 min: 0.5181 max: 2.4066 weight: 0.5727 eval: 1.4147 min: 0.5181 max: 2.4066 weight: 0.6403 eval: 1.2729 min: 0.5181 max: 2.4066 weight: 0.7772 eval: 0.9855 min: 0.5181 max: 2.4066 weight: 0.6411 eval: 1.2712 min: 0.5181 max: 2.4066 weight: 0.7975 eval: 0.9430 min: 0.5181 max: 2.4066 weight: 0.7044 eval: 1.1383 min: 0.5181 max: 2.4066 weight: 0.7491 eval: 1.0445 min: 0.5181 max: 2.4066 weight: 0.7584 eval: 1.0250 min: 0.5181 max: 2.4066 weight: 0.9586 eval: 0.6049 min: 0.5181 max: 2.4066 weight: 0.4888 eval: 1.5906 min: 0.5181 max: 2.4066 weight: 0.5159 eval: 1.5339 min: 0.5181 max: 2.4066 weight: 0.6343 eval: 1.2854 min: 0.5181 max: 2.4066 weight: 0.6365 eval: 1.2807 min: 0.5181 max: 2.4066 weight: 0.6365 eval: 1.2807 min: 0.5181 max: 2.4066 weight: 0.6383 eval: 1.2771 min: 0.5181 max: 2.4066 weight: 0.6352 eval: 1.2836 min: 0.5181 max: 2.4066 weight: 0.4551 eval: 1.6614 min: 0.5181 max: 2.4066 weight: 0.4752 eval: 1.6193 min: 0.5181 max: 2.4066 weight: 0.4504 eval: 1.6713 min: 0.5181 max: 2.4066 weight: 0.3209 eval: 1.9430 min: 0.5181 max: 2.4066 weight: 0.5780 eval: 1.4036 min: 0.5181 max: 2.4066 weight: 0.3009 eval: 1.9850 min: 0.5181 max: 2.4066 weight: 0.2291 eval: 2.1356 min: 0.5181 max: 2.4066 weight: 0.3199 eval: 1.9452 min: 0.5181 max: 2.4066 weight: 0.1840 eval: 2.2303 min: 0.5181 max: 2.4066 weight: 0.2283 eval: 2.1375 min: 0.5181 max: 2.4066 weight: 0.4843 eval: 1.6001 min: 0.5181 max: 2.4066 weight: 0.4920 eval: 1.5841 min: 0.5181 max: 2.4066 weight: 0.3612 eval: 1.8586 min: 0.5181 max: 2.4066 weight: 0.3488 eval: 1.8844 min: 0.5181 max: 2.4066 weight: 0.4471 eval: 1.6782 min: 0.5181 max: 2.4066 weight: 0.8366 eval: 0.8609 min: 0.5181 max: 2.4066 weight: 0.6470 eval: 1.2587 min: 0.5181 max: 2.4066 weight: 0.2372 eval: 2.1186 min: 0.5181 max: 2.4066 weight: 0.7524 eval: 1.0376 min: 0.5181 max: 2.4066 weight: 0.4050 eval: 1.7666 min: 0.5181 max: 2.4066 weight: 0.6502 eval: 1.2521 min: 0.5181 max: 2.4066 weight: 0.3904 eval: 1.7972 min: 0.5181 max: 2.4066 weight: 0.5723 eval: 1.4155 min: 0.5181 max: 2.4066 weight: 0.3903 eval: 1.7975 min: 0.5181 max: 2.4066 weight: 0.3904 eval: 1.7972 min: 0.5181 max: 2.4066 weight: 0.3904 eval: 1.7972 min: 0.5181 max: 2.4066 weight: 0.6137 eval: 1.3286 min: 0.5181 max: 2.4066 weight: 0.5222 eval: 1.5207 min: 0.5181 max: 2.4066 Adding 7969 constraints to all2.constraints Done adding distance constraints # command:Reading probabilities from probabilities.dat Reading constraints from ConstraintSet all2.constraints maxweight: 1.0000 Optimizing... Probability sum: -246.1202, CN propb: -246.1202 weights: 0.2560 constraints: 996 # command:Found ConstraintSet # PrintContacts align.constraints_meta02 Number of constraints in align2.constraints 996 # command:Found ConstraintSet # PrintContacts align_bonus.constraints_meta02 Number of constraints in align2.constraints.bonus 996 # command:Found ConstraintSet # PrintContacts rejected.constraints_meta02 Number of constraints in rejected2.constraints 6973 # command:Found ConstraintSet # PrintContacts rejected_bonus.constraints_meta02 Number of constraints in rejected2.constraints.bonus 6973 # command:Found ConstraintSet # PrintContacts non_contacts.constraints_meta02 Number of constraints in noncontact2.constraints 0 # command:Found ConstraintSet # PrintContacts non_contacts_bonus.constraints_meta02 Number of constraints in noncontact2.constraints.bonus 0 # command:Found ConstraintSet # PrintContacts all.constraints_meta02 Number of constraints in all2.constraints 7969 # command: