# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/ # command:# reading dunbrack-2191.atoms # #computed average backbone with maximum peptide_sq_deviance = 0.002 # computed average trans backbone unit from 53157 examples # computed average trans backbone unit before proline from 2010 examples # computed average cis backbone unit from 97 examples # trans (non-proline) backbone unit: # CA= -2.2087 1.0126 -0.0030 # O= -0.1499 2.2440 0.0016 # C= -0.6889 1.1368 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4581 -0.0000 0.0000 # cis backbone unit: # CA= -0.1436 2.4534 -0.0002 # O= -2.0284 0.9742 0.0015 # C= -0.8018 1.0771 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4668 0.0000 0.0000 # trans backbone unit before proline: # CA= -2.2100 1.0631 -0.0014 # O= -0.1236 2.2458 0.0075 # C= -0.6872 1.1517 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4660 0.0000 0.0000 # After reading dunbrack-2191.atoms have 2191 chains in training database # Count of chains,residues,atoms: 2191,500310,3902258 # 493341 residues have no bad marker # 3226 residues lack atoms needed to compute omega # 1453 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 4 # HAS_OXT 1167 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 3052 # HAS_UNKNOWN_ATOMS 9 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 979 # NON_PLANAR_PEPTIDE 888 # BAD_PEPTIDE 2680 # Note: may sum to more than number of residues, # because one residue may have multiple problems # command:# Reading rotamer library from dunbrack-2191.rot # command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/ # command:# ReadAtomType exp-pdb.types Read AtomType exp-pdb with 49 types. # command:# ReadClashTable exp-pdb-2191-2symm.clash # Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2 # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0349/ # command:# Making conformation for sequence T0349 numbered 1 through 75 Created new target T0349 from T0349.a2m # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0349/ # command:# reading script from file T0349.t04.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zhvA/T0349-1zhvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1zhvA expands to /projects/compbio/data/pdb/1zhv.pdb.gz 1zhvA:# T0349 read from 1zhvA/T0349-1zhvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1zhvA read from 1zhvA/T0349-1zhvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1zhvA to template set # found chain 1zhvA in template set T0349 13 :LSAVGALLDGADIGHLVLDQNM 1zhvA 80 :VLSVISPLSTNGIGIFVVSTFD # choosing archetypes in rotamer library T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSL Number of specific fragments extracted= 2 number of extra gaps= 0 total=2 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1662981775.pdb -s /var/tmp/to_scwrl_1662981775.seq -o /var/tmp/from_scwrl_1662981775.pdb > /var/tmp/scwrl_1662981775.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1662981775.pdb Number of alignments=1 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vjqA/T0349-1vjqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1vjqA expands to /projects/compbio/data/pdb/1vjq.pdb.gz 1vjqA:Skipped atom 292, because occupancy 0.5 <= existing 0.500 in 1vjqA Skipped atom 294, because occupancy 0.500 <= existing 0.500 in 1vjqA Skipped atom 296, because occupancy 0.500 <= existing 0.500 in 1vjqA Skipped atom 298, because occupancy 0.500 <= existing 0.500 in 1vjqA Skipped atom 300, because occupancy 0.500 <= existing 0.500 in 1vjqA Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0349 read from 1vjqA/T0349-1vjqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vjqA read from 1vjqA/T0349-1vjqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1vjqA to template set # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 9 :DAVLLSAVGALLDGADI 1vjqA 10 :NEEQVAFLEALAKQDEL T0349 30 :LDQNMS 1vjqA 30 :WQNPPT T0349 38 :EGS 1vjqA 37 :PGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLA 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIP Number of specific fragments extracted= 4 number of extra gaps= 1 total=6 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_630668850.pdb -s /var/tmp/to_scwrl_630668850.seq -o /var/tmp/from_scwrl_630668850.pdb > /var/tmp/scwrl_630668850.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_630668850.pdb Number of alignments=2 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1yj7A/T0349-1yj7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1yj7A expands to /projects/compbio/data/pdb/1yj7.pdb.gz 1yj7A:Skipped atom 32, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 34, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 36, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 38, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 40, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 132, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 134, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 136, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 138, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 140, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 805, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 807, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 1136, because occupancy 0.500 <= existing 0.500 in 1yj7A Skipped atom 1138, because occupancy 0.500 <= existing 0.500 in 1yj7A # T0349 read from 1yj7A/T0349-1yj7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1yj7A read from 1yj7A/T0349-1yj7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1yj7A to template set # found chain 1yj7A in template set T0349 13 :LSAVGALLDGADIGH 1yj7A 33 :ANQMQALLLSNDVNV T0349 28 :LVLDQNMS 1yj7A 49 :KEMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=9 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_246247255.pdb -s /var/tmp/to_scwrl_246247255.seq -o /var/tmp/from_scwrl_246247255.pdb > /var/tmp/scwrl_246247255.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_246247255.pdb Number of alignments=3 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwmA/T0349-1kwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1kwmA expands to /projects/compbio/data/pdb/1kwm.pdb.gz 1kwmA:Skipped atom 268, because occupancy 0.470 <= existing 0.530 in 1kwmA Skipped atom 270, because occupancy 0.470 <= existing 0.530 in 1kwmA Skipped atom 272, because occupancy 0.470 <= existing 0.530 in 1kwmA WARNING: atom 790 has residue number 4 < previous residue 95A in 1kwmA Skipped atom 1086, because occupancy 0.330 <= existing 0.670 in 1kwmA Skipped atom 1088, because occupancy 0.330 <= existing 0.670 in 1kwmA Skipped atom 1090, because occupancy 0.330 <= existing 0.670 in 1kwmA Skipped atom 1311, because occupancy 0.470 <= existing 0.520 in 1kwmA Skipped atom 1313, because occupancy 0.470 <= existing 0.520 in 1kwmA Skipped atom 1315, because occupancy 0.470 <= existing 0.520 in 1kwmA Skipped atom 1317, because occupancy 0.470 <= existing 0.520 in 1kwmA Skipped atom 1319, because occupancy 0.470 <= existing 0.520 in 1kwmA Skipped atom 1321, because occupancy 0.470 <= existing 0.520 in 1kwmA Skipped atom 1961, because occupancy 0.430 <= existing 0.570 in 1kwmA Skipped atom 1963, because occupancy 0.430 <= existing 0.570 in 1kwmA Skipped atom 1965, because occupancy 0.430 <= existing 0.570 in 1kwmA Skipped atom 1967, because occupancy 0.430 <= existing 0.570 in 1kwmA Skipped atom 1969, because occupancy 0.430 <= existing 0.570 in 1kwmA Skipped atom 1971, because occupancy 0.430 <= existing 0.570 in 1kwmA Skipped atom 1973, because occupancy 0.430 <= existing 0.570 in 1kwmA Skipped atom 2225, because occupancy 0.350 <= existing 0.650 in 1kwmA Skipped atom 2227, because occupancy 0.350 <= existing 0.650 in 1kwmA Skipped atom 2229, because occupancy 0.350 <= existing 0.650 in 1kwmA Skipped atom 2231, because occupancy 0.350 <= existing 0.650 in 1kwmA Skipped atom 2315, because occupancy 0.340 <= existing 0.660 in 1kwmA Skipped atom 2317, because occupancy 0.340 <= existing 0.660 in 1kwmA # T0349 read from 1kwmA/T0349-1kwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1kwmA read from 1kwmA/T0349-1kwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1kwmA to template set # found chain 1kwmA in template set T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSI 1kwmA 19A:DENHINIIRELASTTQIDFWKPDSVTQI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLA 1kwmA 47A:KPHSTVDFRVKAEDTVTVENVLKQNELQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=11 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1858721859.pdb -s /var/tmp/to_scwrl_1858721859.seq -o /var/tmp/from_scwrl_1858721859.pdb > /var/tmp/scwrl_1858721859.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1858721859.pdb Number of alignments=4 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g61A/T0349-1g61A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1g61A/T0349-1g61A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g61A read from 1g61A/T0349-1g61A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g61A in training set Warning: unaligning (T0349)N33 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 13 :LSAVGALLD 1g61A 2037 :VNEVSEVLE T0349 25 :IGHLVLD 1g61A 2046 :TKCLQTN T0349 32 :Q 1g61A 2054 :G T0349 35 :SILEGSLGVIPRRVL 1g61A 2057 :SLVGSLSVANKYGLL T0349 50 :VHEDDLAGARRLLTDAGLAH 1g61A 2076 :VEDEELDRIKNFLKENNLDL Number of specific fragments extracted= 5 number of extra gaps= 1 total=16 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1548348141.pdb -s /var/tmp/to_scwrl_1548348141.seq -o /var/tmp/from_scwrl_1548348141.pdb > /var/tmp/scwrl_1548348141.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1548348141.pdb Number of alignments=5 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1dzkA/T0349-1dzkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1dzkA/T0349-1dzkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1dzkA read from 1dzkA/T0349-1dzkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1dzkA in training set T0349 42 :GVIPRRVL 1dzkA 112 :TIMTGLLG T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=18 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_105575579.pdb -s /var/tmp/to_scwrl_105575579.seq -o /var/tmp/from_scwrl_105575579.pdb > /var/tmp/scwrl_105575579.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_105575579.pdb Number of alignments=6 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f06A/T0349-2f06A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2f06A expands to /projects/compbio/data/pdb/2f06.pdb.gz 2f06A:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 22, because occupancy 0.500 <= existing 0.500 in 2f06A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 26, because occupancy 0.500 <= existing 0.500 in 2f06A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 28, because occupancy 0.500 <= existing 0.500 in 2f06A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 30, because occupancy 0.500 <= existing 0.500 in 2f06A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 32, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 308, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 312, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 314, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 316, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 318, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 320, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 344, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 348, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 350, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 352, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 354, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 356, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 358, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 360, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 746, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 750, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 752, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 754, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 756, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 758, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 760, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 762, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 773, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 777, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 779, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 781, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 783, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 785, because occupancy 0.500 <= existing 0.500 in 2f06A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 850, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 854, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 856, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 858, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 860, because occupancy 0.500 <= existing 0.500 in 2f06A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 1051, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 1055, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 1057, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 1059, because occupancy 0.500 <= existing 0.500 in 2f06A Skipped atom 1061, because occupancy 0.500 <= existing 0.500 in 2f06A # T0349 read from 2f06A/T0349-2f06A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f06A read from 2f06A/T0349-2f06A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2f06A to template set # found chain 2f06A in template set Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 13 :LSAVGALLDGADIGHLVLD 2f06A 17 :LTEVTEVLAKENINLSALC T0349 43 :VIP 2f06A 36 :IAE T0349 46 :R 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLA 2f06A 51 :DPDKAYKALKDNHFA Number of specific fragments extracted= 5 number of extra gaps= 1 total=23 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_964445884.pdb -s /var/tmp/to_scwrl_964445884.seq -o /var/tmp/from_scwrl_964445884.pdb > /var/tmp/scwrl_964445884.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_964445884.pdb Number of alignments=7 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zvpA/T0349-1zvpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1zvpA expands to /projects/compbio/data/pdb/1zvp.pdb.gz 1zvpA:# T0349 read from 1zvpA/T0349-1zvpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1zvpA read from 1zvpA/T0349-1zvpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1zvpA to template set # found chain 1zvpA in template set T0349 15 :AVGALLDGADIGH 1zvpA 89 :AFATKLAEHGISA T0349 35 :SILEG 1zvpA 102 :NVIAG T0349 43 :VIPRRVLVHEDDLAGARRLLTD 1zvpA 107 :YYHDHIFVQKEKAQQALQALGE Number of specific fragments extracted= 3 number of extra gaps= 0 total=26 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_2118421992.pdb -s /var/tmp/to_scwrl_2118421992.seq -o /var/tmp/from_scwrl_2118421992.pdb > /var/tmp/scwrl_2118421992.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2118421992.pdb Number of alignments=8 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1v6sA/T0349-1v6sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1v6sA/T0349-1v6sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1v6sA read from 1v6sA/T0349-1v6sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1v6sA in training set T0349 13 :LSAVGALLD 1v6sA 199 :IGVIESLLP T0349 24 :DIGHLVLDQNMS 1v6sA 208 :RIDRLLIGGAMA T0349 36 :ILEGSLGVI 1v6sA 225 :ALGGEVGRS T0349 49 :LVHEDDLAGARRLLTDA 1v6sA 234 :LVEEDRLDLAKDLLGRA Number of specific fragments extracted= 4 number of extra gaps= 0 total=30 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1520223204.pdb -s /var/tmp/to_scwrl_1520223204.seq -o /var/tmp/from_scwrl_1520223204.pdb > /var/tmp/scwrl_1520223204.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1520223204.pdb Number of alignments=9 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1gnkA/T0349-1gnkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1gnkA expands to /projects/compbio/data/pdb/1gnk.pdb.gz 1gnkA:# T0349 read from 1gnkA/T0349-1gnkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1gnkA read from 1gnkA/T0349-1gnkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1gnkA to template set # found chain 1gnkA in template set T0349 48 :VLVHEDDLAGARRLLTDAGLA 1gnkA 6 :VIIKPFKLEDVREALSSIGIQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=31 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_452867621.pdb -s /var/tmp/to_scwrl_452867621.seq -o /var/tmp/from_scwrl_452867621.pdb > /var/tmp/scwrl_452867621.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_452867621.pdb Number of alignments=10 # command:# reading script from file T0349.t06.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zhvA/T0349-1zhvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1zhvA/T0349-1zhvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1zhvA read from 1zhvA/T0349-1zhvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1zhvA in template set T0349 12 :LLSAVGALLDGADIGHLVLDQNM 1zhvA 79 :IVLSVISPLSTNGIGIFVVSTFD T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSD 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSLLLEHH Number of specific fragments extracted= 2 number of extra gaps= 0 total=33 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1017679567.pdb -s /var/tmp/to_scwrl_1017679567.seq -o /var/tmp/from_scwrl_1017679567.pdb > /var/tmp/scwrl_1017679567.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1017679567.pdb Number of alignments=11 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vjqA/T0349-1vjqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1vjqA/T0349-1vjqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vjqA read from 1vjqA/T0349-1vjqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 5 :LRTNDAVLLSAVGALLDGADI 1vjqA 6 :IVPTNEEQVAFLEALAKQDEL T0349 30 :L 1vjqA 30 :W T0349 32 :QNMSILEGS 1vjqA 31 :QNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPFT Number of specific fragments extracted= 4 number of extra gaps= 1 total=37 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1857962503.pdb -s /var/tmp/to_scwrl_1857962503.seq -o /var/tmp/from_scwrl_1857962503.pdb > /var/tmp/scwrl_1857962503.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1857962503.pdb Number of alignments=12 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwmA/T0349-1kwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1kwmA/T0349-1kwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1kwmA read from 1kwmA/T0349-1kwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1kwmA in template set T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVLDQNMSI 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWKPDSVTQI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHE 1kwmA 47A:KPHSTVDFRVKAEDTVTVENVLKQNELQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=39 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_201690613.pdb -s /var/tmp/to_scwrl_201690613.seq -o /var/tmp/from_scwrl_201690613.pdb > /var/tmp/scwrl_201690613.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_201690613.pdb Number of alignments=13 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1dzkA/T0349-1dzkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1dzkA/T0349-1dzkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1dzkA read from 1dzkA/T0349-1dzkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1dzkA in training set T0349 35 :SILEGSLGV 1dzkA 112 :TIMTGLLGK T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=41 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_213801961.pdb -s /var/tmp/to_scwrl_213801961.seq -o /var/tmp/from_scwrl_213801961.pdb > /var/tmp/scwrl_213801961.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_213801961.pdb Number of alignments=14 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g61A/T0349-1g61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1g61A/T0349-1g61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g61A read from 1g61A/T0349-1g61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g61A in training set Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 9 :DAVLLSAVGALLD 1g61A 2033 :DKDDVNEVSEVLE T0349 25 :IGHLVLDQN 1g61A 2046 :TKCLQTNIG T0349 36 :ILEGSLGVI 1g61A 2057 :SLVGSLSVA T0349 45 :PRRVL 1g61A 2067 :KYGLL T0349 50 :VHEDDLAGARRLLTDAGLAHE 1g61A 2076 :VEDEELDRIKNFLKENNLDLN Number of specific fragments extracted= 5 number of extra gaps= 1 total=46 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_822262754.pdb -s /var/tmp/to_scwrl_822262754.seq -o /var/tmp/from_scwrl_822262754.pdb > /var/tmp/scwrl_822262754.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_822262754.pdb Number of alignments=15 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1yj7A/T0349-1yj7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1yj7A/T0349-1yj7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1yj7A read from 1yj7A/T0349-1yj7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1yj7A in template set T0349 10 :AVLLSAVGALLDGADIGHL 1yj7A 30 :EKEANQMQALLLSNDVNVS T0349 29 :VLDQNMS 1yj7A 50 :EMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=49 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_648031326.pdb -s /var/tmp/to_scwrl_648031326.seq -o /var/tmp/from_scwrl_648031326.pdb > /var/tmp/scwrl_648031326.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_648031326.pdb Number of alignments=16 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f06A/T0349-2f06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 2f06A/T0349-2f06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f06A read from 2f06A/T0349-2f06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f06A in template set Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 13 :LSAVGALLDGADIGHLVLD 2f06A 17 :LTEVTEVLAKENINLSALC T0349 32 :QNM 2f06A 40 :ADF T0349 37 :L 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLAHE 2f06A 51 :DPDKAYKALKDNHFAVN Number of specific fragments extracted= 5 number of extra gaps= 3 total=54 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1411154258.pdb -s /var/tmp/to_scwrl_1411154258.seq -o /var/tmp/from_scwrl_1411154258.pdb > /var/tmp/scwrl_1411154258.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1411154258.pdb Number of alignments=17 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zvpA/T0349-1zvpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1zvpA/T0349-1zvpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1zvpA read from 1zvpA/T0349-1zvpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1zvpA in template set T0349 13 :LSAVGALLDGADIGHLVL 1zvpA 87 :TAAFATKLAEHGISANVI T0349 38 :E 1zvpA 105 :A T0349 42 :GVIPRRVLVHEDDLAGARRLLT 1zvpA 106 :GYYHDHIFVQKEKAQQALQALG Number of specific fragments extracted= 3 number of extra gaps= 0 total=57 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1737518943.pdb -s /var/tmp/to_scwrl_1737518943.seq -o /var/tmp/from_scwrl_1737518943.pdb > /var/tmp/scwrl_1737518943.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1737518943.pdb Number of alignments=18 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1v6sA/T0349-1v6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1v6sA/T0349-1v6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1v6sA read from 1v6sA/T0349-1v6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1v6sA in training set T0349 13 :LSAVGALL 1v6sA 199 :IGVIESLL T0349 23 :ADIGHLVLDQNMS 1v6sA 207 :PRIDRLLIGGAMA T0349 36 :ILEGSLGVI 1v6sA 225 :ALGGEVGRS T0349 49 :LVHEDDLAGARRLLTDA 1v6sA 234 :LVEEDRLDLAKDLLGRA Number of specific fragments extracted= 4 number of extra gaps= 0 total=61 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_282828202.pdb -s /var/tmp/to_scwrl_282828202.seq -o /var/tmp/from_scwrl_282828202.pdb > /var/tmp/scwrl_282828202.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_282828202.pdb Number of alignments=19 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1gnkA/T0349-1gnkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1gnkA/T0349-1gnkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1gnkA read from 1gnkA/T0349-1gnkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 16 :VGALLDGADIGHLVLD 1gnkA 16 :VREALSSIGIQGLTVT T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAG 1gnkA 62 :DVAIADDQLDEVIDIVSKAA Number of specific fragments extracted= 3 number of extra gaps= 0 total=64 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_110613202.pdb -s /var/tmp/to_scwrl_110613202.seq -o /var/tmp/from_scwrl_110613202.pdb > /var/tmp/scwrl_110613202.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_110613202.pdb Number of alignments=20 # command:# reading script from file T0349.t2k.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zhvA/T0349-1zhvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1zhvA/T0349-1zhvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1zhvA read from 1zhvA/T0349-1zhvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1zhvA in template set T0349 9 :DAVLLSAVGALLDGADIGHLVLDQ 1zhvA 76 :ETGIVLSVISPLSTNGIGIFVVST T0349 37 :LEG 1zhvA 100 :FDG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRS 1zhvA 103 :DHLLVRSNDLEKTADLLANAGHSLLLEH Number of specific fragments extracted= 3 number of extra gaps= 0 total=67 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_114723506.pdb -s /var/tmp/to_scwrl_114723506.seq -o /var/tmp/from_scwrl_114723506.pdb > /var/tmp/scwrl_114723506.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_114723506.pdb Number of alignments=21 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1yj7A/T0349-1yj7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1yj7A/T0349-1yj7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1yj7A read from 1yj7A/T0349-1yj7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1yj7A in template set T0349 1 :MRELLRTN 1yj7A 20 :MKEQLYTG T0349 9 :DAVLLSAVGALLDGADIG 1yj7A 29 :TEKEANQMQALLLSNDVN T0349 30 :LDQN 1yj7A 51 :MDKS T0349 39 :G 1yj7A 55 :G T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1yj7A 56 :NMTLSVAAADFVRAITILNNNGFPKK T0349 74 :D 1yj7A 82 :K Number of specific fragments extracted= 6 number of extra gaps= 0 total=73 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_982936784.pdb -s /var/tmp/to_scwrl_982936784.seq -o /var/tmp/from_scwrl_982936784.pdb > /var/tmp/scwrl_982936784.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_982936784.pdb Number of alignments=22 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1nm2A/T0349-1nm2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1nm2A expands to /projects/compbio/data/pdb/1nm2.pdb.gz 1nm2A:# T0349 read from 1nm2A/T0349-1nm2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1nm2A read from 1nm2A/T0349-1nm2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1nm2A to template set # found chain 1nm2A in template set T0349 8 :NDAVLLSAVGALLDGADIGHLVLDQNMSILEG 1nm2A 252 :ANPVRWDLCMETFKELGVTAIIEVCPGGTLTG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDA 1nm2A 288 :ALPGVKTLALKTPDDLDAARELVAEH Number of specific fragments extracted= 2 number of extra gaps= 0 total=75 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1676902020.pdb -s /var/tmp/to_scwrl_1676902020.seq -o /var/tmp/from_scwrl_1676902020.pdb > /var/tmp/scwrl_1676902020.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1676902020.pdb Number of alignments=23 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1he2A/T0349-1he2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1he2A expands to /projects/compbio/data/pdb/1he2.pdb.gz 1he2A:Skipped atom 40, because occupancy 0.410 <= existing 0.590 in 1he2A Skipped atom 42, because occupancy 0.410 <= existing 0.590 in 1he2A Skipped atom 44, because occupancy 0.410 <= existing 0.590 in 1he2A Skipped atom 46, because occupancy 0.410 <= existing 0.590 in 1he2A Skipped atom 48, because occupancy 0.410 <= existing 0.590 in 1he2A Skipped atom 78, because occupancy 0.480 <= existing 0.520 in 1he2A Skipped atom 80, because occupancy 0.480 <= existing 0.520 in 1he2A Skipped atom 82, because occupancy 0.480 <= existing 0.520 in 1he2A Skipped atom 84, because occupancy 0.480 <= existing 0.520 in 1he2A Skipped atom 86, because occupancy 0.480 <= existing 0.520 in 1he2A Skipped atom 637, because occupancy 0.320 <= existing 0.680 in 1he2A Skipped atom 639, because occupancy 0.320 <= existing 0.680 in 1he2A Skipped atom 1055, because occupancy 0.350 <= existing 0.640 in 1he2A Skipped atom 1057, because occupancy 0.350 <= existing 0.640 in 1he2A Skipped atom 1059, because occupancy 0.350 <= existing 0.640 in 1he2A Skipped atom 1534, because occupancy 0.330 <= existing 0.670 in 1he2A Skipped atom 1536, because occupancy 0.330 <= existing 0.670 in 1he2A Skipped atom 1538, because occupancy 0.330 <= existing 0.670 in 1he2A Skipped atom 1540, because occupancy 0.330 <= existing 0.670 in 1he2A Skipped atom 2145, because occupancy 0.320 <= existing 0.680 in 1he2A Skipped atom 2147, because occupancy 0.320 <= existing 0.680 in 1he2A Skipped atom 2149, because occupancy 0.320 <= existing 0.680 in 1he2A Skipped atom 2151, because occupancy 0.320 <= existing 0.680 in 1he2A Skipped atom 2345, because occupancy 0.430 <= existing 0.570 in 1he2A Skipped atom 2347, because occupancy 0.430 <= existing 0.570 in 1he2A Skipped atom 2349, because occupancy 0.430 <= existing 0.570 in 1he2A Skipped atom 2351, because occupancy 0.430 <= existing 0.570 in 1he2A Skipped atom 2381, because occupancy 0.230 <= existing 0.770 in 1he2A Skipped atom 2546, because occupancy 0.420 <= existing 0.580 in 1he2A Skipped atom 2548, because occupancy 0.420 <= existing 0.580 in 1he2A Skipped atom 2550, because occupancy 0.420 <= existing 0.580 in 1he2A Skipped atom 2552, because occupancy 0.420 <= existing 0.580 in 1he2A Skipped atom 2554, because occupancy 0.420 <= existing 0.580 in 1he2A Skipped atom 2556, because occupancy 0.420 <= existing 0.580 in 1he2A Skipped atom 2558, because occupancy 0.420 <= existing 0.580 in 1he2A Skipped atom 2641, because occupancy 0.200 <= existing 0.800 in 1he2A Skipped atom 2643, because occupancy 0.200 <= existing 0.800 in 1he2A Skipped atom 2645, because occupancy 0.200 <= existing 0.800 in 1he2A Skipped atom 2686, because occupancy 0.460 <= existing 0.540 in 1he2A Skipped atom 2688, because occupancy 0.460 <= existing 0.540 in 1he2A Skipped atom 2815, because occupancy 0.390 <= existing 0.610 in 1he2A Skipped atom 2817, because occupancy 0.390 <= existing 0.610 in 1he2A Skipped atom 2819, because occupancy 0.390 <= existing 0.610 in 1he2A # T0349 read from 1he2A/T0349-1he2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1he2A read from 1he2A/T0349-1he2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1he2A to template set # found chain 1he2A in template set T0349 12 :LLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPR 1he2A 90 :GARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR T0349 51 :HEDDLAGARRLLTDAGLA 1he2A 128 :VTDDHIRMHKVLRESGLK T0349 69 :HELRSDD 1he2A 152 :PHIGDQP Number of specific fragments extracted= 3 number of extra gaps= 0 total=78 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1486222841.pdb -s /var/tmp/to_scwrl_1486222841.seq -o /var/tmp/from_scwrl_1486222841.pdb > /var/tmp/scwrl_1486222841.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1486222841.pdb Number of alignments=24 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g61A/T0349-1g61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1g61A/T0349-1g61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g61A read from 1g61A/T0349-1g61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g61A in training set Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 12 :LLSAVGALLD 1g61A 2036 :DVNEVSEVLE T0349 25 :IGHLVLDQN 1g61A 2046 :TKCLQTNIG T0349 36 :ILEGSLG 1g61A 2057 :SLVGSLS T0349 43 :VIPRRVL 1g61A 2065 :ANKYGLL T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1g61A 2076 :VEDEELDRIKNFLKENNLDLNV Number of specific fragments extracted= 5 number of extra gaps= 1 total=83 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_950390868.pdb -s /var/tmp/to_scwrl_950390868.seq -o /var/tmp/from_scwrl_950390868.pdb > /var/tmp/scwrl_950390868.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_950390868.pdb Number of alignments=25 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1a3yA/T0349-1a3yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1a3yA expands to /projects/compbio/data/pdb/1a3y.pdb.gz 1a3yA:# T0349 read from 1a3yA/T0349-1a3yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1a3yA read from 1a3yA/T0349-1a3yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1a3yA to template set # found chain 1a3yA in template set T0349 50 :VHEDDLAGARRLLTDAGLAHE 1a3yA 124 :IEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=84 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_255789528.pdb -s /var/tmp/to_scwrl_255789528.seq -o /var/tmp/from_scwrl_255789528.pdb > /var/tmp/scwrl_255789528.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_255789528.pdb Number of alignments=26 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwmA/T0349-1kwmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1kwmA/T0349-1kwmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1kwmA read from 1kwmA/T0349-1kwmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1kwmA in template set T0349 5 :LRTNDAVLLSAVGALLDGADIGHLV 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWK T0349 34 :MSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLA 1kwmA 40A:PDSVTQIKPHSTVDFRVKAEDTVTVENVLKQNELQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=86 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1266235188.pdb -s /var/tmp/to_scwrl_1266235188.seq -o /var/tmp/from_scwrl_1266235188.pdb > /var/tmp/scwrl_1266235188.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1266235188.pdb Number of alignments=27 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vjqA/T0349-1vjqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1vjqA/T0349-1vjqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vjqA read from 1vjqA/T0349-1vjqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vjqA in template set Warning: unaligning (T0349)N33 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)S35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 4 :LLRTNDAVLLSAVGALLDGAD 1vjqA 5 :VIVPTNEEQVAFLEALAKQDE T0349 32 :Q 1vjqA 26 :L T0349 36 :ILEGS 1vjqA 30 :WQNPP T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLA 1vjqA 36 :EPGQPVVILIPSDMVEWFLEMLKAKGIP Number of specific fragments extracted= 4 number of extra gaps= 1 total=90 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1242608871.pdb -s /var/tmp/to_scwrl_1242608871.seq -o /var/tmp/from_scwrl_1242608871.pdb > /var/tmp/scwrl_1242608871.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1242608871.pdb Number of alignments=28 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1cye/T0349-1cye-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1cye expands to /projects/compbio/data/pdb/1cye.pdb.gz 1cye:Warning: there is no chain 1cye will retry with 1cyeA # T0349 read from 1cye/T0349-1cye-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1cye read from 1cye/T0349-1cye-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1cye to template set # found chain 1cye in template set T0349 16 :VGALLDGADIGHLVLDQNMSIL 1cye 42 :ALNKLQAGGYGFVISDWNMPNM T0349 38 :EGSLGVIPRRVLV 1cye 75 :DGAMSALPVLMVT T0349 51 :HEDDLAGARR 1cye 91 :KKENIIAAAQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=93 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1137949907.pdb -s /var/tmp/to_scwrl_1137949907.seq -o /var/tmp/from_scwrl_1137949907.pdb > /var/tmp/scwrl_1137949907.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1137949907.pdb Number of alignments=29 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ble/T0349-1ble-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ble expands to /projects/compbio/data/pdb/1ble.pdb.gz 1ble:Warning: there is no chain 1ble will retry with 1bleA # T0349 read from 1ble/T0349-1ble-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1ble read from 1ble/T0349-1ble-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1ble to template set # found chain 1ble in template set T0349 8 :NDAVLLSAV 1ble 86 :NPSDIVSLI T0349 21 :D 1ble 95 :E T0349 22 :GADIGHLVLDQ 1ble 97 :GVPIKTVNVGG T0349 34 :M 1ble 108 :M T0349 36 :ILEGSLGVIPRRVLVHEDDLAGARR 1ble 109 :RFENHRRQITKSVSVTEQDIKAFET T0349 62 :LTDAGLAHELRS 1ble 134 :LSDKGVKLELRQ Number of specific fragments extracted= 6 number of extra gaps= 0 total=99 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1277849957.pdb -s /var/tmp/to_scwrl_1277849957.seq -o /var/tmp/from_scwrl_1277849957.pdb > /var/tmp/scwrl_1277849957.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1277849957.pdb Number of alignments=30 # command:# reading script from file T0349.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zhvA/T0349-1zhvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1zhvA/T0349-1zhvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1zhvA read from 1zhvA/T0349-1zhvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1zhvA in template set T0349 12 :LLSAVGALLDGADIGHLVLDQNM 1zhvA 79 :IVLSVISPLSTNGIGIFVVSTFD T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSD 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSLLLEHH Number of specific fragments extracted= 2 number of extra gaps= 0 total=101 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_777210498.pdb -s /var/tmp/to_scwrl_777210498.seq -o /var/tmp/from_scwrl_777210498.pdb > /var/tmp/scwrl_777210498.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_777210498.pdb Number of alignments=31 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vjqA/T0349-1vjqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1vjqA/T0349-1vjqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vjqA read from 1vjqA/T0349-1vjqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 5 :LRTNDAVLLSAVGALLDGADI 1vjqA 6 :IVPTNEEQVAFLEALAKQDEL T0349 30 :L 1vjqA 30 :W T0349 32 :QNMSILEGS 1vjqA 31 :QNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPFT Number of specific fragments extracted= 4 number of extra gaps= 1 total=105 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_653448036.pdb -s /var/tmp/to_scwrl_653448036.seq -o /var/tmp/from_scwrl_653448036.pdb > /var/tmp/scwrl_653448036.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_653448036.pdb Number of alignments=32 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1yj7A/T0349-1yj7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1yj7A/T0349-1yj7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1yj7A read from 1yj7A/T0349-1yj7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1yj7A in template set T0349 10 :AVLLSAVGALLDGADIGHL 1yj7A 30 :EKEANQMQALLLSNDVNVS T0349 29 :VLDQNMS 1yj7A 50 :EMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=108 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1908518807.pdb -s /var/tmp/to_scwrl_1908518807.seq -o /var/tmp/from_scwrl_1908518807.pdb > /var/tmp/scwrl_1908518807.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1908518807.pdb Number of alignments=33 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g61A/T0349-1g61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1g61A/T0349-1g61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g61A read from 1g61A/T0349-1g61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g61A in training set Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 12 :LLSAVGALLD 1g61A 2036 :DVNEVSEVLE T0349 25 :IGHLVLDQN 1g61A 2046 :TKCLQTNIG T0349 36 :ILEGSLG 1g61A 2057 :SLVGSLS T0349 43 :VIPRRVL 1g61A 2065 :ANKYGLL T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1g61A 2076 :VEDEELDRIKNFLKENNLDLNV Number of specific fragments extracted= 5 number of extra gaps= 1 total=113 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1023457753.pdb -s /var/tmp/to_scwrl_1023457753.seq -o /var/tmp/from_scwrl_1023457753.pdb > /var/tmp/scwrl_1023457753.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1023457753.pdb Number of alignments=34 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwmA/T0349-1kwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1kwmA/T0349-1kwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1kwmA read from 1kwmA/T0349-1kwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1kwmA in template set T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVLDQNMSI 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWKPDSVTQI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHE 1kwmA 47A:KPHSTVDFRVKAEDTVTVENVLKQNELQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=115 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_364686248.pdb -s /var/tmp/to_scwrl_364686248.seq -o /var/tmp/from_scwrl_364686248.pdb > /var/tmp/scwrl_364686248.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_364686248.pdb Number of alignments=35 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1dzkA/T0349-1dzkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1dzkA/T0349-1dzkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1dzkA read from 1dzkA/T0349-1dzkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1dzkA in training set T0349 35 :SILEGSLGV 1dzkA 112 :TIMTGLLGK T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=117 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1309383302.pdb -s /var/tmp/to_scwrl_1309383302.seq -o /var/tmp/from_scwrl_1309383302.pdb > /var/tmp/scwrl_1309383302.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1309383302.pdb Number of alignments=36 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f06A/T0349-2f06A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 2f06A/T0349-2f06A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f06A read from 2f06A/T0349-2f06A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f06A in template set Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 8 :N 2f06A 12 :N T0349 13 :LSAVGALLDGADIGH 2f06A 17 :LTEVTEVLAKENINL T0349 32 :QNMSILEGSL 2f06A 32 :SALCIAENAD T0349 46 :R 2f06A 45 :L T0349 49 :LVHE 2f06A 48 :IVSD T0349 55 :LAGARRLLTDAGLA 2f06A 52 :PDKAYKALKDNHFA Number of specific fragments extracted= 6 number of extra gaps= 2 total=123 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1129033332.pdb -s /var/tmp/to_scwrl_1129033332.seq -o /var/tmp/from_scwrl_1129033332.pdb > /var/tmp/scwrl_1129033332.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1129033332.pdb Number of alignments=37 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zvpA/T0349-1zvpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1zvpA/T0349-1zvpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1zvpA read from 1zvpA/T0349-1zvpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1zvpA in template set T0349 13 :LSAVGALLDGADIGHLVL 1zvpA 87 :TAAFATKLAEHGISANVI T0349 38 :E 1zvpA 105 :A T0349 42 :GVIPRRVLVHEDDLAGARRLLT 1zvpA 106 :GYYHDHIFVQKEKAQQALQALG Number of specific fragments extracted= 3 number of extra gaps= 0 total=126 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1329132132.pdb -s /var/tmp/to_scwrl_1329132132.seq -o /var/tmp/from_scwrl_1329132132.pdb > /var/tmp/scwrl_1329132132.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1329132132.pdb Number of alignments=38 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1nm2A/T0349-1nm2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1nm2A/T0349-1nm2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1nm2A read from 1nm2A/T0349-1nm2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1nm2A in template set T0349 8 :NDAVLLSAVGALLDGADIGHLVLDQNMSILEG 1nm2A 252 :ANPVRWDLCMETFKELGVTAIIEVCPGGTLTG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDA 1nm2A 288 :ALPGVKTLALKTPDDLDAARELVAEH Number of specific fragments extracted= 2 number of extra gaps= 0 total=128 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_1280321647.pdb -s /var/tmp/to_scwrl_1280321647.seq -o /var/tmp/from_scwrl_1280321647.pdb > /var/tmp/scwrl_1280321647.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1280321647.pdb Number of alignments=39 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1hdoA/T0349-1hdoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1hdoA/T0349-1hdoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1hdoA read from 1hdoA/T0349-1hdoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1hdoA in training set Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 12 :LLSAVGALLDGADIGHLVLDQNMSILEGSL 1hdoA 90 :GARNIVAAMKAHGVDKVVACTSAFLLWDPT T0349 44 :IPRR 1hdoA 122 :PPRL T0349 49 :LVHEDDLAGARRLLTD 1hdoA 126 :QAVTDDHIRMHKVLRE T0349 67 :LA 1hdoA 144 :LK Number of specific fragments extracted= 4 number of extra gaps= 2 total=132 # request to SCWRL produces command: ulimit -t 68 ; scwrl3 -i /var/tmp/to_scwrl_501772890.pdb -s /var/tmp/to_scwrl_501772890.seq -o /var/tmp/from_scwrl_501772890.pdb > /var/tmp/scwrl_501772890.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_501772890.pdb Number of alignments=40 # command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0349//projects/compbio/experiments/protein-predict/casp7/constraints/T0349/manyalignments.under or /projects/compbio/experiments/protein-predict/casp7/T0349//projects/compbio/experiments/protein-predict/casp7/constraints/T0349/manyalignments.under.gz for input Trying /projects/compbio/experiments/protein-predict/casp7/constraints/T0349/manyalignments.under # reading script from file /projects/compbio/experiments/protein-predict/casp7/constraints/T0349/manyalignments.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f06A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 2f06A/merged-a2m # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)S14 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)A15 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)G17 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)A18 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 Warning: unaligning (T0349)D74 because last residue in template chain is (2f06A)L141 T0349 4 :LLRTNDAVLL 2f06A 1 :MVAKQLSIFL T0349 16 :V 2f06A 45 :L T0349 19 :LLDGADIGHLVLDQ 2f06A 48 :IVSDPDKAYKALKD T0349 33 :NMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGL 2f06A 96 :FIEYMYSFANNNVANVVIRPSNMDKCIEVLKEKKV T0349 68 :AHELRS 2f06A 135 :ASDLYK Number of specific fragments extracted= 5 number of extra gaps= 2 total=137 Number of alignments=41 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)D74 because last residue in template chain is (2f06A)L141 T0349 4 :LLRTNDAV 2f06A 1 :MVAKQLSI T0349 13 :LSAVGALL 2f06A 17 :LTEVTEVL T0349 21 :DGADI 2f06A 38 :ENADF T0349 28 :L 2f06A 45 :L T0349 29 :VLD 2f06A 48 :IVS T0349 32 :QN 2f06A 61 :DN T0349 34 :MSIL 2f06A 95 :VFIE T0349 38 :EGSLGVIPRRVLVHEDDLAGARRLLTDAGLA 2f06A 101 :YSFANNNVANVVIRPSNMDKCIEVLKEKKVD T0349 69 :HELRS 2f06A 136 :SDLYK Number of specific fragments extracted= 9 number of extra gaps= 2 total=146 Number of alignments=42 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set T0349 48 :VLVHEDDLAGARRLLTDAGL 2f06A 111 :VVIRPSNMDKCIEVLKEKKV Number of specific fragments extracted= 1 number of extra gaps= 0 total=147 Number of alignments=43 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGL 2f06A 105 :NNNVANVVIRPSNMDKCIEVLKEKKV Number of specific fragments extracted= 1 number of extra gaps= 0 total=148 Number of alignments=44 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 T0349 4 :LLRTNDAVL 2f06A 1 :MVAKQLSIF T0349 13 :LSAVGALLDGADIGHLVL 2f06A 17 :LTEVTEVLAKENINLSAL T0349 31 :DQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 2f06A 94 :GVFIEYMYSFANNNVANVVIRPSNMDKCIEVLKEKKVDLLAASDL Number of specific fragments extracted= 3 number of extra gaps= 0 total=151 Number of alignments=45 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 T0349 4 :LLRTNDAV 2f06A 1 :MVAKQLSI T0349 13 :LSAVGALLDGADIGHLVL 2f06A 17 :LTEVTEVLAKENINLSAL T0349 31 :D 2f06A 50 :S T0349 32 :QNMSILE 2f06A 93 :EGVFIEY T0349 39 :GSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSD 2f06A 102 :SFANNNVANVVIRPSNMDKCIEVLKEKKVDLLAASD Number of specific fragments extracted= 5 number of extra gaps= 1 total=156 Number of alignments=46 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set T0349 47 :RVLVHEDDLAGARRLLTDAGL 2f06A 110 :NVVIRPSNMDKCIEVLKEKKV Number of specific fragments extracted= 1 number of extra gaps= 0 total=157 Number of alignments=47 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set T0349 33 :NMSILEG 2f06A 94 :GVFIEYM T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDAG 2f06A 103 :FANNNVANVVIRPSNMDKCIEVLKEKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=159 Number of alignments=48 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)G39 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)S40 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)G42 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 1 :MRELLRTN 2f06A 5 :QLSIFLEN T0349 13 :LSAVGALLDGADIGHLVLDQNMSILE 2f06A 17 :LTEVTEVLAKENINLSALCIAENADF T0349 41 :L 2f06A 45 :L T0349 44 :IPR 2f06A 48 :IVS T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 2f06A 110 :NVVIRPSNMDKCIEVLKEKKVDLLAASDL Number of specific fragments extracted= 5 number of extra gaps= 3 total=164 Number of alignments=49 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 T0349 4 :LLRTN 2f06A 8 :IFLEN T0349 13 :LSAVGALLDGADIGHLVLDQN 2f06A 17 :LTEVTEVLAKENINLSALCIA T0349 34 :M 2f06A 42 :F T0349 37 :L 2f06A 59 :L T0349 38 :EGSLGVI 2f06A 61 :DNHFAVN T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 2f06A 108 :VANVVIRPSNMDKCIEVLKEKKVDLLAASDL Number of specific fragments extracted= 6 number of extra gaps= 2 total=170 Number of alignments=50 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set T0349 48 :VLVHEDDLAGARRLLTDAGL 2f06A 111 :VVIRPSNMDKCIEVLKEKKV Number of specific fragments extracted= 1 number of extra gaps= 0 total=171 Number of alignments=51 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=171 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set T0349 12 :LLSAVGALLD 2f06A 89 :FLSAEGVFIE Number of specific fragments extracted= 1 number of extra gaps= 0 total=172 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=172 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)V16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)G17 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)A18 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L19 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)P45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)R46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 4 :LLRTNDAVLLSA 2f06A 1 :MVAKQLSIFLEN T0349 20 :LDGADIGHLVLDQNMSIL 2f06A 17 :LTEVTEVLAKENINLSAL T0349 38 :EGSL 2f06A 39 :NADF T0349 44 :I 2f06A 45 :L T0349 47 :RV 2f06A 48 :IV T0349 53 :DDLAGARRLLTDAGLAHELRSDD 2f06A 50 :SDPDKAYKALKDNHFAVNITDVV Number of specific fragments extracted= 6 number of extra gaps= 3 total=178 Number of alignments=52 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 4 :LLR 2f06A 1 :MVA T0349 7 :TN 2f06A 11 :EN T0349 13 :LSAVGALLDGADIGHLVL 2f06A 17 :LTEVTEVLAKENINLSAL T0349 31 :DQNM 2f06A 39 :NADF T0349 37 :L 2f06A 45 :L T0349 40 :SL 2f06A 48 :IV T0349 53 :DDLAGARRLLTDAGLAHELRSDD 2f06A 50 :SDPDKAYKALKDNHFAVNITDVV Number of specific fragments extracted= 7 number of extra gaps= 3 total=185 Number of alignments=53 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 7 :TN 2f06A 11 :EN T0349 13 :LSAVGALLDGADIGHLVL 2f06A 17 :LTEVTEVLAKENINLSAL T0349 31 :DQNM 2f06A 39 :NADF T0349 37 :L 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLAHEL 2f06A 51 :DPDKAYKALKDNHFAVNI Number of specific fragments extracted= 6 number of extra gaps= 3 total=191 Number of alignments=54 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 13 :LSAVGALLDGADIGHLVLD 2f06A 17 :LTEVTEVLAKENINLSALC T0349 32 :QNM 2f06A 40 :ADF T0349 37 :L 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLAHEL 2f06A 51 :DPDKAYKALKDNHFAVNI Number of specific fragments extracted= 5 number of extra gaps= 3 total=196 Number of alignments=55 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set T0349 53 :DDLAGARRLLTDAGLAHELRS 2f06A 50 :SDPDKAYKALKDNHFAVNITD Number of specific fragments extracted= 1 number of extra gaps= 0 total=197 Number of alignments=56 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 37 :L 2f06A 45 :L T0349 40 :SL 2f06A 48 :IV T0349 53 :DDLAGARRLLTDAGLAHEL 2f06A 50 :SDPDKAYKALKDNHFAVNI Number of specific fragments extracted= 3 number of extra gaps= 2 total=200 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 15 :AVGALLDGADIGHLVL 2f06A 19 :EVTEVLAKENINLSAL T0349 31 :DQNM 2f06A 39 :NADF T0349 37 :L 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLAH 2f06A 51 :DPDKAYKALKDNHFAV Number of specific fragments extracted= 5 number of extra gaps= 2 total=205 Number of alignments=57 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 13 :LSAVGALLDGADIGHLVLD 2f06A 17 :LTEVTEVLAKENINLSALC T0349 43 :VIP 2f06A 36 :IAE T0349 46 :R 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLA 2f06A 51 :DPDKAYKALKDNHFA Number of specific fragments extracted= 5 number of extra gaps= 1 total=210 Number of alignments=58 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)V16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)G17 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)A18 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L19 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)P45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)R46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 4 :LLRTNDAVLLSA 2f06A 1 :MVAKQLSIFLEN T0349 20 :LDGADIGHLVLDQNMSIL 2f06A 17 :LTEVTEVLAKENINLSAL T0349 38 :EGSL 2f06A 39 :NADF T0349 44 :I 2f06A 45 :L T0349 47 :RV 2f06A 48 :IV T0349 53 :DDLAGARRLLTDAGLAHELRSDD 2f06A 50 :SDPDKAYKALKDNHFAVNITDVV Number of specific fragments extracted= 6 number of extra gaps= 3 total=216 Number of alignments=59 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 4 :LLR 2f06A 1 :MVA T0349 7 :TN 2f06A 11 :EN T0349 13 :LSAVGALLDGADIGHLVL 2f06A 17 :LTEVTEVLAKENINLSAL T0349 31 :DQNM 2f06A 39 :NADF T0349 37 :L 2f06A 45 :L T0349 40 :SL 2f06A 48 :IV T0349 53 :DDLAGARRLLTDAGLAHELRSDD 2f06A 50 :SDPDKAYKALKDNHFAVNITDVV Number of specific fragments extracted= 7 number of extra gaps= 3 total=223 Number of alignments=60 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 4 :LL 2f06A 1 :MV T0349 6 :RTN 2f06A 10 :LEN T0349 13 :LSAVGALLDGADIGHLVLD 2f06A 17 :LTEVTEVLAKENINLSALC T0349 32 :QNM 2f06A 40 :ADF T0349 37 :L 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLAHEL 2f06A 51 :DPDKAYKALKDNHFAVNI Number of specific fragments extracted= 7 number of extra gaps= 3 total=230 Number of alignments=61 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 4 :LLRTN 2f06A 8 :IFLEN T0349 13 :LSAVGALLDGADIGHLVLD 2f06A 17 :LTEVTEVLAKENINLSALC T0349 32 :QNM 2f06A 40 :ADF T0349 37 :L 2f06A 45 :L T0349 40 :SLGVIPRRVL 2f06A 65 :AVNITDVVGI T0349 51 :HEDDLAGARRLLTDAGLAHEL 2f06A 79 :VPGALAKVLGFLSAEGVFIEY Number of specific fragments extracted= 6 number of extra gaps= 3 total=236 Number of alignments=62 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set T0349 53 :DDLAGARRLLTDAGLAHELRS 2f06A 50 :SDPDKAYKALKDNHFAVNITD Number of specific fragments extracted= 1 number of extra gaps= 0 total=237 Number of alignments=63 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 37 :L 2f06A 45 :L T0349 40 :SL 2f06A 48 :IV T0349 53 :DDLAGARRLLTDAGLAHEL 2f06A 50 :SDPDKAYKALKDNHFAVNI Number of specific fragments extracted= 3 number of extra gaps= 2 total=240 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 13 :LSAVGALLDGADIGHLVLD 2f06A 17 :LTEVTEVLAKENINLSALC T0349 32 :QNM 2f06A 40 :ADF T0349 37 :L 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLAHE 2f06A 51 :DPDKAYKALKDNHFAVN Number of specific fragments extracted= 5 number of extra gaps= 3 total=245 Number of alignments=64 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 13 :LSAVGALLDGADIGHLVLD 2f06A 17 :LTEVTEVLAKENINLSALC T0349 32 :QNM 2f06A 40 :ADF T0349 37 :L 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLAHE 2f06A 51 :DPDKAYKALKDNHFAVN Number of specific fragments extracted= 5 number of extra gaps= 3 total=250 Number of alignments=65 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)V16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)G17 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)A18 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L19 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)R46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 4 :LLRTNDAVLLSA 2f06A 1 :MVAKQLSIFLEN T0349 20 :LDGADIGHLVLDQNMS 2f06A 17 :LTEVTEVLAKENINLS T0349 36 :ILEGSLG 2f06A 36 :IAENADF T0349 45 :P 2f06A 45 :L T0349 48 :VL 2f06A 48 :IV T0349 53 :DDLAGARRLLTDAGLAHELRSDD 2f06A 50 :SDPDKAYKALKDNHFAVNITDVV Number of specific fragments extracted= 6 number of extra gaps= 3 total=256 Number of alignments=66 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I36 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 4 :LLRT 2f06A 1 :MVAK T0349 8 :N 2f06A 12 :N T0349 13 :LSAVGALLDGADIGHLVL 2f06A 17 :LTEVTEVLAKENINLSAL T0349 31 :DQNM 2f06A 39 :NADF T0349 37 :L 2f06A 45 :L T0349 40 :SL 2f06A 48 :IV T0349 53 :DDLAGARRLLTDAGLAHELRSDD 2f06A 50 :SDPDKAYKALKDNHFAVNITDVV Number of specific fragments extracted= 7 number of extra gaps= 3 total=263 Number of alignments=67 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)R46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 2 :REL 2f06A 4 :KQL T0349 5 :LRTN 2f06A 9 :FLEN T0349 13 :LSAVGALLDGADIGH 2f06A 17 :LTEVTEVLAKENINL T0349 32 :QNMSILEGSLG 2f06A 32 :SALCIAENADF T0349 45 :P 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLAHEL 2f06A 51 :DPDKAYKALKDNHFAVNI Number of specific fragments extracted= 7 number of extra gaps= 3 total=270 Number of alignments=68 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)N-1 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)N-1 Warning: unaligning (T0349)E3 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)A0 Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 4 :LLRT 2f06A 2 :VAKQ T0349 8 :N 2f06A 12 :N T0349 13 :LSAVGALLDGADIGH 2f06A 17 :LTEVTEVLAKENINL T0349 32 :QNMSILEGSL 2f06A 32 :SALCIAENAD T0349 46 :R 2f06A 45 :L T0349 49 :LVHE 2f06A 48 :IVSD T0349 55 :LAGARRLLTDAGLA 2f06A 52 :PDKAYKALKDNHFA Number of specific fragments extracted= 7 number of extra gaps= 2 total=277 Number of alignments=69 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set T0349 54 :DLAGARRLLTDAGLAHELRS 2f06A 51 :DPDKAYKALKDNHFAVNITD Number of specific fragments extracted= 1 number of extra gaps= 0 total=278 Number of alignments=70 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set T0349 54 :DLAGARRLLTDAGLAHEL 2f06A 51 :DPDKAYKALKDNHFAVNI Number of specific fragments extracted= 1 number of extra gaps= 0 total=279 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE in next template residue (2f06A)I44 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)I44 Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 17 :GALLDGADIGH 2f06A 21 :TEVLAKENINL T0349 32 :QNMSILEGSLG 2f06A 32 :SALCIAENADF T0349 45 :P 2f06A 45 :L T0349 49 :LVH 2f06A 48 :IVS T0349 54 :DLAGARRLLTDAGLAH 2f06A 51 :DPDKAYKALKDNHFAV Number of specific fragments extracted= 5 number of extra gaps= 2 total=284 Number of alignments=71 # 2f06A read from 2f06A/merged-a2m # found chain 2f06A in template set Warning: unaligning (T0349)D9 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)S14 Warning: unaligning (T0349)A10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)S14 Warning: unaligning (T0349)V11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G15 Warning: unaligning (T0349)L12 because of BadResidue code BAD_PEPTIDE at template residue (2f06A)R16 Warning: unaligning (T0349)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f06A)G47 Warning: unaligning (T0349)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f06A)G47 T0349 8 :N 2f06A 12 :N T0349 13 :LSAVGALLDGADIGH 2f06A 17 :LTEVTEVLAKENINL T0349 32 :QNMSILEGSL 2f06A 32 :SALCIAENAD T0349 46 :R 2f06A 45 :L T0349 49 :LVHE 2f06A 48 :IVSD T0349 55 :LAGARRLLTDAGLA 2f06A 52 :PDKAYKALKDNHFA Number of specific fragments extracted= 6 number of extra gaps= 2 total=290 Number of alignments=72 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ve1A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ve1A expands to /projects/compbio/data/pdb/1ve1.pdb.gz 1ve1A:# T0349 read from 1ve1A/merged-a2m # 1ve1A read from 1ve1A/merged-a2m # adding 1ve1A to template set # found chain 1ve1A in template set T0349 1 :MRELLRTNDAVLLSAV 1ve1A 127 :ALRLKEELGAFMPDQF T0349 17 :GALLD 1ve1A 164 :EGRID T0349 22 :GADIGHLVLDQNMSILEGS 1ve1A 191 :IPHVKVIAVEPARSNVLSG T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDA 1ve1A 231 :LSLLDGVIQVWEEDAFPLARRLARE T0349 66 :GLAHELRSDD 1ve1A 273 :QVARELGPGK Number of specific fragments extracted= 5 number of extra gaps= 0 total=295 Number of alignments=73 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 2 :RELLR 1ve1A 30 :LEGLN T0349 7 :T 1ve1A 59 :P T0349 8 :NDA 1ve1A 62 :GQV T0349 11 :VLLSAVGALLD 1ve1A 75 :IGLAMIAASRG T0349 22 :GAD 1ve1A 108 :GAE T0349 25 :IGHLVLDQNMS 1ve1A 183 :VGRYLKERIPH T0349 36 :ILEG 1ve1A 205 :NVLS T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDA 1ve1A 230 :DLSLLDGVIQVWEEDAFPLARRLARE T0349 66 :GL 1ve1A 257 :GL T0349 68 :AHELR 1ve1A 275 :ARELG Number of specific fragments extracted= 10 number of extra gaps= 0 total=305 Number of alignments=74 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 15 :AVGALLDGADIGHLVLDQNMSILEGSLG 1ve1A 44 :AWYMIKDAEERGILRPGSGQVIVEPTSG Number of specific fragments extracted= 1 number of extra gaps= 0 total=306 Number of alignments=75 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 40 :SLGVIPRRVLVHEDDLAGARRLLT 1ve1A 230 :DLSLLDGVIQVWEEDAFPLARRLA Number of specific fragments extracted= 1 number of extra gaps= 0 total=307 Number of alignments=76 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :MRELLRTNDAVLLSAV 1ve1A 127 :ALRLKEELGAFMPDQF T0349 17 :GALLD 1ve1A 164 :EGRID T0349 22 :GADIGHLVLDQNMS 1ve1A 191 :IPHVKVIAVEPARS T0349 36 :ILEGSL 1ve1A 206 :VLSGGK T0349 42 :GVIPRRVLVHEDDLAGARRLLTDA 1ve1A 232 :SLLDGVIQVWEEDAFPLARRLARE T0349 66 :GLAHELRSDD 1ve1A 273 :QVARELGPGK Number of specific fragments extracted= 6 number of extra gaps= 0 total=313 Number of alignments=77 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 3 :ELLR 1ve1A 2 :RVEG T0349 7 :TND 1ve1A 9 :KTP T0349 10 :AVLL 1ve1A 25 :EVWV T0349 14 :SAVGALLDGADIGHLVLDQNMSILEG 1ve1A 43 :PAWYMIKDAEERGILRPGSGQVIVEP T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDA 1ve1A 230 :DLSLLDGVIQVWEEDAFPLARRLARE T0349 66 :GLAHELRSDD 1ve1A 273 :QVARELGPGK Number of specific fragments extracted= 6 number of extra gaps= 0 total=319 Number of alignments=78 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 19 :LLDGADIGHL 1ve1A 216 :GFQGMGPGFI T0349 33 :NMSILEGSLG 1ve1A 226 :PENLDLSLLD T0349 46 :RRVLVHEDDLAGARRLLTD 1ve1A 236 :GVIQVWEEDAFPLARRLAR Number of specific fragments extracted= 3 number of extra gaps= 0 total=322 Number of alignments=79 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 16 :VGALLDGADIGHL 1ve1A 213 :GQHGFQGMGPGFI T0349 33 :NMSILEGSLG 1ve1A 226 :PENLDLSLLD T0349 46 :RRVLVHEDDLAGARRLLTD 1ve1A 236 :GVIQVWEEDAFPLARRLAR Number of specific fragments extracted= 3 number of extra gaps= 0 total=325 Number of alignments=80 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :MRELLRTNDAVLLSAVGALL 1ve1A 127 :ALRLKEELGAFMPDQFKNPA T0349 21 :DGADIGHL 1ve1A 218 :QGMGPGFI T0349 36 :ILEGSLGVIPRRVLVHEDDLAGARRLLTDA 1ve1A 226 :PENLDLSLLDGVIQVWEEDAFPLARRLARE T0349 66 :GLAHELRSDD 1ve1A 273 :QVARELGPGK Number of specific fragments extracted= 4 number of extra gaps= 0 total=329 Number of alignments=81 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :M 1ve1A 18 :V T0349 2 :RELLRTNDAVLLSAVGALL 1ve1A 128 :LRLKEELGAFMPDQFKNPA T0349 21 :D 1ve1A 148 :V T0349 22 :G 1ve1A 151 :H T0349 24 :DIGHLVLD 1ve1A 166 :RIDAFVYG T0349 32 :QN 1ve1A 192 :PH T0349 35 :S 1ve1A 215 :H T0349 36 :ILEGSLGVIPRRVLVHEDDLAGARRLLTDA 1ve1A 226 :PENLDLSLLDGVIQVWEEDAFPLARRLARE T0349 66 :GLAHELRS 1ve1A 257 :GLFLGMSS T0349 74 :D 1ve1A 301 :Y Number of specific fragments extracted= 10 number of extra gaps= 0 total=339 Number of alignments=82 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 17 :GALLDGADIGHL 1ve1A 214 :QHGFQGMGPGFI T0349 36 :ILEGSLGVIPRRVLVHEDDLAGARRLLTDA 1ve1A 226 :PENLDLSLLDGVIQVWEEDAFPLARRLARE T0349 66 :GLAHELRS 1ve1A 257 :GLFLGMSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=342 Number of alignments=83 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 17 :GALLDGADIGHL 1ve1A 214 :QHGFQGMGPGFI T0349 36 :ILEGSLGVIPRRVLVHEDDLAGARRLLTDA 1ve1A 226 :PENLDLSLLDGVIQVWEEDAFPLARRLARE T0349 66 :G 1ve1A 257 :G Number of specific fragments extracted= 3 number of extra gaps= 0 total=345 Number of alignments=84 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 20 :LDGADIGHLVLDQNMSILEGSLGVI 1ve1A 217 :FQGMGPGFIPENLDLSLLDGVIQVW T0349 51 :HEDDLAGARRLLTDAGL 1ve1A 242 :EEDAFPLARRLAREEGL Number of specific fragments extracted= 2 number of extra gaps= 0 total=347 Number of alignments=85 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 21 :DGADIGHLVLDQNMSILEGSLGVI 1ve1A 218 :QGMGPGFIPENLDLSLLDGVIQVW T0349 51 :HEDDLAGARRLLTDAGLAHELR 1ve1A 242 :EEDAFPLARRLAREEGLFLGMS Number of specific fragments extracted= 2 number of extra gaps= 0 total=349 Number of alignments=86 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :M 1ve1A 1 :M T0349 2 :RELLRTNDAVLLSAVGALLDGADIGH 1ve1A 10 :TPVVRLAKVVEPDMAEVWVKLEGLNP T0349 38 :EGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1ve1A 36 :GGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNT Number of specific fragments extracted= 3 number of extra gaps= 0 total=352 Number of alignments=87 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :M 1ve1A 1 :M T0349 3 :ELLRTNDAVLLSAVGALLDGADIGH 1ve1A 11 :PVVRLAKVVEPDMAEVWVKLEGLNP T0349 38 :EGSLGVIPRRVLVHEDDLAGA 1ve1A 36 :GGSIKDRPAWYMIKDAEERGI T0349 62 :LTDAGLAHELRSD 1ve1A 57 :LRPGSGQVIVEPT Number of specific fragments extracted= 4 number of extra gaps= 0 total=356 Number of alignments=88 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :M 1ve1A 1 :M T0349 7 :TNDAVLLSAVGALLDG 1ve1A 39 :IKDRPAWYMIKDAEER T0349 23 :ADIGHLVLDQNMS 1ve1A 59 :PGSGQVIVEPTSG T0349 36 :ILEGSLG 1ve1A 79 :MIAASRG T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1ve1A 86 :YRLILTMPAQMSEERKRVLKAFGAELVLTDPE Number of specific fragments extracted= 5 number of extra gaps= 0 total=361 Number of alignments=89 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :M 1ve1A 1 :M T0349 7 :TNDAVLLSAVGALLDGADIG 1ve1A 39 :IKDRPAWYMIKDAEERGILR T0349 27 :HLVLDQNMS 1ve1A 89 :ILTMPAQMS T0349 36 :ILEG 1ve1A 103 :VLKA T0349 41 :LG 1ve1A 107 :FG T0349 45 :PRRVLVHEDD 1ve1A 109 :AELVLTDPER T0349 55 :LAGARRLLTDAGLAHELRSDD 1ve1A 124 :REEALRLKEELGAFMPDQFKN Number of specific fragments extracted= 7 number of extra gaps= 0 total=368 Number of alignments=90 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 20 :LDGADIGHLVLDQNMSILEGSLGVI 1ve1A 217 :FQGMGPGFIPENLDLSLLDGVIQVW T0349 51 :HEDDLAGARRLLTDAGLAHELRSD 1ve1A 242 :EEDAFPLARRLAREEGLFLGMSSG Number of specific fragments extracted= 2 number of extra gaps= 0 total=370 Number of alignments=91 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 20 :LDGADIGHLVLDQNMSILEGSLGVI 1ve1A 217 :FQGMGPGFIPENLDLSLLDGVIQVW T0349 51 :HEDDLAGARRLLTDAGLAHELRS 1ve1A 242 :EEDAFPLARRLAREEGLFLGMSS Number of specific fragments extracted= 2 number of extra gaps= 0 total=372 Number of alignments=92 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 11 :VLLSAVGALLDG 1ve1A 178 :GTITGVGRYLKE T0349 23 :ADIGHLVLDQNMS 1ve1A 192 :PHVKVIAVEPARS T0349 36 :ILEGS 1ve1A 206 :VLSGG T0349 41 :LGVIPRRVLVHEDD 1ve1A 231 :LSLLDGVIQVWEED T0349 55 :LAGARRLLTDAGL 1ve1A 246 :FPLARRLAREEGL Number of specific fragments extracted= 5 number of extra gaps= 0 total=377 Number of alignments=93 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 9 :DAVLLSAVGALLDG 1ve1A 177 :GGTITGVGRYLKER T0349 23 :ADIGHLVLD 1ve1A 192 :PHVKVIAVE T0349 32 :QNMSILEGS 1ve1A 202 :ARSNVLSGG T0349 41 :LGVIPRRVLVHEDD 1ve1A 231 :LSLLDGVIQVWEED T0349 55 :LAGARRLLTDAGLA 1ve1A 246 :FPLARRLAREEGLF Number of specific fragments extracted= 5 number of extra gaps= 0 total=382 Number of alignments=94 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :M 1ve1A 1 :M T0349 2 :RELLRTNDAVLLSAVGALLDGADIGH 1ve1A 10 :TPVVRLAKVVEPDMAEVWVKLEGLNP T0349 38 :EGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1ve1A 36 :GGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNT Number of specific fragments extracted= 3 number of extra gaps= 0 total=385 Number of alignments=95 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :M 1ve1A 1 :M T0349 3 :ELLRTNDAVLLSAVGALLDGADIGH 1ve1A 11 :PVVRLAKVVEPDMAEVWVKLEGLNP T0349 38 :EGSLGVIPRRVLVHEDDLAGA 1ve1A 36 :GGSIKDRPAWYMIKDAEERGI T0349 62 :LTDAGLAHELRSD 1ve1A 57 :LRPGSGQVIVEPT Number of specific fragments extracted= 4 number of extra gaps= 0 total=389 Number of alignments=96 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :MR 1ve1A 1 :MR T0349 8 :NDAVLLSAVGALLDGADI 1ve1A 40 :KDRPAWYMIKDAEERGIL T0349 26 :GHLVLDQNMS 1ve1A 62 :GQVIVEPTSG T0349 36 :ILEGSLG 1ve1A 79 :MIAASRG T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1ve1A 86 :YRLILTMPAQMSEERKRVLKAFGAELVLTDPE Number of specific fragments extracted= 5 number of extra gaps= 0 total=394 Number of alignments=97 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :MR 1ve1A 1 :MR T0349 7 :TNDAVLLSAVGALLDGADIG 1ve1A 39 :IKDRPAWYMIKDAEERGILR T0349 27 :HLVLDQNMS 1ve1A 89 :ILTMPAQMS T0349 36 :ILE 1ve1A 103 :VLK T0349 40 :SLG 1ve1A 106 :AFG T0349 45 :PRRVLVHED 1ve1A 109 :AELVLTDPE T0349 54 :DLAGARRLLTDAGLAHELRSDD 1ve1A 123 :AREEALRLKEELGAFMPDQFKN Number of specific fragments extracted= 7 number of extra gaps= 0 total=401 Number of alignments=98 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 20 :LDGADIGHLVLDQNMSILEGSLGVI 1ve1A 217 :FQGMGPGFIPENLDLSLLDGVIQVW T0349 51 :HEDDLAGARRLLTDAGLAHELRSD 1ve1A 242 :EEDAFPLARRLAREEGLFLGMSSG Number of specific fragments extracted= 2 number of extra gaps= 0 total=403 Number of alignments=99 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 20 :LDGADIGHLVLDQNMSILEGSLGVI 1ve1A 217 :FQGMGPGFIPENLDLSLLDGVIQVW T0349 51 :HEDDLAGARRLLTDAGLAHELRS 1ve1A 242 :EEDAFPLARRLAREEGLFLGMSS Number of specific fragments extracted= 2 number of extra gaps= 0 total=405 Number of alignments=100 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 11 :VLLSAVGALLDGA 1ve1A 178 :GTITGVGRYLKER T0349 24 :DIGHLVLDQNMS 1ve1A 193 :HVKVIAVEPARS T0349 36 :ILEGS 1ve1A 206 :VLSGG T0349 41 :LGVIPRRVLVHEDD 1ve1A 231 :LSLLDGVIQVWEED T0349 55 :LAGARRLLTDAGL 1ve1A 246 :FPLARRLAREEGL Number of specific fragments extracted= 5 number of extra gaps= 0 total=410 Number of alignments=101 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 8 :NDAVLLSAVGALLDG 1ve1A 176 :TGGTITGVGRYLKER T0349 23 :ADIGHLVLD 1ve1A 192 :PHVKVIAVE T0349 32 :QNMSILEGS 1ve1A 202 :ARSNVLSGG T0349 41 :LGVIPRRVLVHEDD 1ve1A 231 :LSLLDGVIQVWEED T0349 55 :LAGARRLLTDAGLA 1ve1A 246 :FPLARRLAREEGLF Number of specific fragments extracted= 5 number of extra gaps= 0 total=415 Number of alignments=102 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :MR 1ve1A 1 :MR T0349 3 :ELLRTNDAVLLSAVGALLDGADIGH 1ve1A 11 :PVVRLAKVVEPDMAEVWVKLEGLNP T0349 38 :EGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1ve1A 36 :GGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNT Number of specific fragments extracted= 3 number of extra gaps= 0 total=418 Number of alignments=103 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :MR 1ve1A 1 :MR T0349 3 :ELLRTNDAVLLSAVGALLDGADIG 1ve1A 11 :PVVRLAKVVEPDMAEVWVKLEGLN T0349 27 :HLVLDQNMS 1ve1A 46 :YMIKDAEER T0349 36 :ILEGSLGVI 1ve1A 57 :LRPGSGQVI Number of specific fragments extracted= 4 number of extra gaps= 0 total=422 Number of alignments=104 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :MR 1ve1A 1 :MR T0349 3 :ELLRT 1ve1A 11 :PVVRL T0349 8 :NDAVLLSAVGAL 1ve1A 40 :KDRPAWYMIKDA T0349 21 :DGADI 1ve1A 52 :EERGI T0349 26 :GHLVLDQNMS 1ve1A 63 :QVIVEPTSGN T0349 41 :LG 1ve1A 78 :AM T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1ve1A 86 :YRLILTMPAQMSEERKRVLKAFGAELVLTDPE Number of specific fragments extracted= 7 number of extra gaps= 0 total=429 Number of alignments=105 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 1 :MR 1ve1A 1 :MR T0349 3 :ELLRTND 1ve1A 11 :PVVRLAK T0349 10 :AVLLSAVGALLDGADIG 1ve1A 42 :RPAWYMIKDAEERGILR T0349 27 :HLVLDQNMS 1ve1A 89 :ILTMPAQMS T0349 57 :GARRLLTDAGLAHELRSDD 1ve1A 99 :ERKRVLKAFGAELVLTDPE Number of specific fragments extracted= 5 number of extra gaps= 0 total=434 Number of alignments=106 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 20 :LDGADIGHLVLDQNMSILEGSLGVI 1ve1A 217 :FQGMGPGFIPENLDLSLLDGVIQVW T0349 51 :HEDDLAGARRLLTDAGL 1ve1A 242 :EEDAFPLARRLAREEGL Number of specific fragments extracted= 2 number of extra gaps= 0 total=436 Number of alignments=107 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 19 :LLDGADIGHLVLDQNMSILEGSLGVI 1ve1A 216 :GFQGMGPGFIPENLDLSLLDGVIQVW T0349 51 :HEDDLAGARRLLTDAGLAHE 1ve1A 242 :EEDAFPLARRLAREEGLFLG Number of specific fragments extracted= 2 number of extra gaps= 0 total=438 Number of alignments=108 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 7 :TNDAVLLSAVGALLDGA 1ve1A 174 :SGTGGTITGVGRYLKER T0349 24 :DIGHLVLDQNMS 1ve1A 193 :HVKVIAVEPARS T0349 36 :ILEGS 1ve1A 206 :VLSGG T0349 41 :LGVIPRRVLVHEDD 1ve1A 231 :LSLLDGVIQVWEED T0349 55 :LAGARRLLTDAGLA 1ve1A 246 :FPLARRLAREEGLF Number of specific fragments extracted= 5 number of extra gaps= 0 total=443 Number of alignments=109 # 1ve1A read from 1ve1A/merged-a2m # found chain 1ve1A in template set T0349 7 :TNDAVLLSAVGALLDGA 1ve1A 174 :SGTGGTITGVGRYLKER T0349 24 :DIGHLVLD 1ve1A 193 :HVKVIAVE T0349 32 :QNMSILEGS 1ve1A 202 :ARSNVLSGG T0349 41 :LGVIPRRVLVHEDD 1ve1A 231 :LSLLDGVIQVWEED T0349 55 :LAGARRLLTDAGLA 1ve1A 246 :FPLARRLAREEGLF Number of specific fragments extracted= 5 number of extra gaps= 0 total=448 Number of alignments=110 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1gt1A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1gt1A expands to /projects/compbio/data/pdb/1gt1.pdb.gz 1gt1A:# T0349 read from 1gt1A/merged-a2m # 1gt1A read from 1gt1A/merged-a2m # adding 1gt1A to template set # found chain 1gt1A in template set Warning: unaligning (T0349)G17 because first residue in template chain is (1gt1A)Q2 T0349 18 :ALLDGADIGHL 1gt1A 3 :EEEAEQNLSEL T0349 31 :DQNMSILEGSLGVIPRRVLVHED 1gt1A 26 :NPEKIQENGPFRTYFRELVFDDE T0349 54 :DLAGARRLLT 1gt1A 107 :DKHGQTTELT T0349 64 :DAGLAHELRSDD 1gt1A 142 :DKKNVVNFLENE Number of specific fragments extracted= 4 number of extra gaps= 0 total=452 Number of alignments=111 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 3 :ELLRTNDAVLLS 1gt1A 28 :EKIQENGPFRTY T0349 15 :AVGALLDG 1gt1A 41 :RELVFDDE T0349 23 :ADI 1gt1A 50 :GTV T0349 26 :G 1gt1A 77 :G T0349 27 :HLVLDQNMS 1gt1A 89 :FKIVSLSRT T0349 36 :ILEG 1gt1A 102 :HNIN T0349 40 :SLGVIPRRVLVHEDD 1gt1A 115 :LTELFVKLNVEDEDL T0349 56 :AGARRLLTDAGLAHE 1gt1A 130 :EKFWKLTEDKGIDKK T0349 71 :LRSDD 1gt1A 149 :FLENE Number of specific fragments extracted= 9 number of extra gaps= 0 total=461 Number of alignments=112 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 31 :DQNMSILEGSLGVIPRRVLVHED 1gt1A 26 :NPEKIQENGPFRTYFRELVFDDE T0349 54 :D 1gt1A 50 :G Number of specific fragments extracted= 2 number of extra gaps= 0 total=463 Number of alignments=113 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 34 :MSILEGSLGVIPRRVLVHED 1gt1A 29 :KIQENGPFRTYFRELVFDDE Number of specific fragments extracted= 1 number of extra gaps= 0 total=464 Number of alignments=114 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGA 1gt1A 26 :NPEKIQENGPFRTYFRELVFDDE T0349 24 :DIGHLVLDQNMSILEGS 1gt1A 95 :SRTHLVAHNINVDKHGQ T0349 41 :LGVIPR 1gt1A 116 :TELFVK T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1gt1A 122 :LNVEDEDLEKFWKLTEDKGIDKKNVVNF Number of specific fragments extracted= 4 number of extra gaps= 0 total=468 Number of alignments=115 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 1 :MRELLRTNDA 1gt1A 26 :NPEKIQENGP T0349 11 :VLLSAVGALLDG 1gt1A 37 :RTYFRELVFDDE T0349 23 :ADI 1gt1A 50 :GTV T0349 26 :GHLVLD 1gt1A 77 :GTYVAD T0349 35 :S 1gt1A 90 :K T0349 36 :ILE 1gt1A 107 :DKH T0349 39 :GSLGVIPR 1gt1A 114 :ELTELFVK T0349 48 :VLVHEDDLAGARRLLTDAGLAHELR 1gt1A 122 :LNVEDEDLEKFWKLTEDKGIDKKNV T0349 73 :SDD 1gt1A 157 :HPE Number of specific fragments extracted= 9 number of extra gaps= 0 total=477 Number of alignments=116 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 31 :DQNMSILEGSLGVIPRRVLVHED 1gt1A 26 :NPEKIQENGPFRTYFRELVFDDE T0349 54 :D 1gt1A 50 :G Number of specific fragments extracted= 2 number of extra gaps= 0 total=479 Number of alignments=117 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 33 :NMSILEGSLGVIPRRVLVHED 1gt1A 28 :EKIQENGPFRTYFRELVFDDE Number of specific fragments extracted= 1 number of extra gaps= 0 total=480 Number of alignments=118 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 1 :MRELLRTND 1gt1A 40 :FRELVFDDE T0349 10 :AVLLSAVGALLDGADIGHLVLDQNMS 1gt1A 50 :GTVDFYFSVKRDGKWKNVHVKATKQD T0349 37 :LEGS 1gt1A 83 :YEGQ T0349 41 :LGVIPR 1gt1A 116 :TELFVK T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1gt1A 122 :LNVEDEDLEKFWKLTEDKGIDKKNVVNF Number of specific fragments extracted= 5 number of extra gaps= 0 total=485 Number of alignments=119 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :ELLRTNDAVLLSA 1gt1A 3 :EEEAEQNLSELSG T0349 16 :VGALLDGADIGHL 1gt1A 24 :STNPEKIQENGPF T0349 29 :VLDQNMSILEG 1gt1A 38 :TYFRELVFDDE T0349 40 :SLGVIP 1gt1A 51 :TVDFYF T0349 46 :R 1gt1A 121 :K T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1gt1A 122 :LNVEDEDLEKFWKLTEDKGIDKKNVVNF Number of specific fragments extracted= 6 number of extra gaps= 0 total=491 Number of alignments=120 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)G26 because first residue in template chain is (1gt1A)Q2 T0349 27 :HLVLDQNMSILEG 1gt1A 3 :EEEAEQNLSELSG Number of specific fragments extracted= 1 number of extra gaps= 0 total=492 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=492 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 50 :VHEDDLAGARRLLTDAGL 1gt1A 124 :VEDEDLEKFWKLTEDKGI Number of specific fragments extracted= 1 number of extra gaps= 0 total=493 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 48 :VLVHEDDLAGARRLLTDAG 1gt1A 122 :LNVEDEDLEKFWKLTEDKG Number of specific fragments extracted= 1 number of extra gaps= 0 total=494 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :ELLRTNDAVLLSAVGALLDGADIGHLVLDQN 1gt1A 3 :EEEAEQNLSELSGPWRTVYIGSTNPEKIQEN T0349 39 :GSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1gt1A 34 :GPFRTYFRELVFDDEKGTVDFYFSVKRDGKWKNVHVK Number of specific fragments extracted= 2 number of extra gaps= 0 total=496 Number of alignments=121 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :E 1gt1A 3 :E T0349 5 :LRTNDAVLLSAVGALLDGAD 1gt1A 30 :IQENGPFRTYFRELVFDDEK T0349 25 :IGHLVLDQNMSI 1gt1A 69 :VKATKQDDGTYV T0349 37 :LEG 1gt1A 83 :YEG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDAGLAHELR 1gt1A 114 :ELTELFVKLNVEDEDLEKFWKLTEDKGIDKKNV Number of specific fragments extracted= 5 number of extra gaps= 0 total=501 Number of alignments=122 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :E 1gt1A 3 :E T0349 19 :LLDGAD 1gt1A 29 :KIQENG T0349 25 :IGHLVLDQNMSIL 1gt1A 40 :FRELVFDDEKGTV T0349 38 :EGSLGVIPR 1gt1A 61 :DGKWKNVHV T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1gt1A 124 :VEDEDLEKFWKLTEDKGIDKKN T0349 72 :RSDD 1gt1A 156 :PHPE Number of specific fragments extracted= 6 number of extra gaps= 0 total=507 Number of alignments=123 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 19 :LLDGAD 1gt1A 29 :KIQENG T0349 25 :IGHLVLDQNMSIL 1gt1A 40 :FRELVFDDEKGTV T0349 38 :EGSLGVIPRRV 1gt1A 61 :DGKWKNVHVKA T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1gt1A 124 :VEDEDLEKFWKLTEDKGIDKKN T0349 72 :RSDD 1gt1A 156 :PHPE Number of specific fragments extracted= 5 number of extra gaps= 0 total=512 Number of alignments=124 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 47 :RVLVHEDDLAGARRLLTDAGLA 1gt1A 121 :KLNVEDEDLEKFWKLTEDKGID Number of specific fragments extracted= 1 number of extra gaps= 0 total=513 Number of alignments=125 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAH 1gt1A 118 :LFVKLNVEDEDLEKFWKLTEDKGIDK Number of specific fragments extracted= 1 number of extra gaps= 0 total=514 Number of alignments=126 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1gt1A 124 :VEDEDLEKFWKLTEDKGIDKKN Number of specific fragments extracted= 1 number of extra gaps= 0 total=515 Number of alignments=127 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1gt1A 124 :VEDEDLEKFWKLTEDKGIDKKN Number of specific fragments extracted= 1 number of extra gaps= 0 total=516 Number of alignments=128 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :ELLRTNDAVLLSAVGALLDGADIGHLVLDQN 1gt1A 3 :EEEAEQNLSELSGPWRTVYIGSTNPEKIQEN T0349 39 :GSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1gt1A 34 :GPFRTYFRELVFDDEKGTVDFYFSVKRDGKWKNVHVK Number of specific fragments extracted= 2 number of extra gaps= 0 total=518 Number of alignments=129 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :E 1gt1A 3 :E T0349 5 :LRTNDAVLLSAVGALLDGAD 1gt1A 30 :IQENGPFRTYFRELVFDDEK T0349 25 :IGHLVLDQNMSI 1gt1A 69 :VKATKQDDGTYV T0349 37 :LEG 1gt1A 83 :YEG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDAGLAHELR 1gt1A 114 :ELTELFVKLNVEDEDLEKFWKLTEDKGIDKKNV Number of specific fragments extracted= 5 number of extra gaps= 0 total=523 Number of alignments=130 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :E 1gt1A 3 :E T0349 4 :LLRTNDA 1gt1A 21 :YIGSTNP T0349 18 :ALLDGAD 1gt1A 28 :EKIQENG T0349 25 :IGHLVLDQNMSIL 1gt1A 40 :FRELVFDDEKGTV T0349 38 :EGSLGVIPRR 1gt1A 61 :DGKWKNVHVK T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1gt1A 124 :VEDEDLEKFWKLTEDKGIDKKN T0349 72 :RSDD 1gt1A 156 :PHPE Number of specific fragments extracted= 7 number of extra gaps= 0 total=530 Number of alignments=131 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :E 1gt1A 3 :E T0349 4 :LLRTNDA 1gt1A 21 :YIGSTNP T0349 19 :LLDGAD 1gt1A 29 :KIQENG T0349 25 :IGHLVLDQNMSIL 1gt1A 40 :FRELVFDDEKGTV T0349 38 :EGSLGVIPRRV 1gt1A 61 :DGKWKNVHVKA T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1gt1A 124 :VEDEDLEKFWKLTEDKGIDKKN T0349 72 :RSDD 1gt1A 156 :PHPE Number of specific fragments extracted= 7 number of extra gaps= 0 total=537 Number of alignments=132 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 47 :RVLVHEDDLAGARRLLTDAGLA 1gt1A 121 :KLNVEDEDLEKFWKLTEDKGID Number of specific fragments extracted= 1 number of extra gaps= 0 total=538 Number of alignments=133 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAH 1gt1A 118 :LFVKLNVEDEDLEKFWKLTEDKGIDK Number of specific fragments extracted= 1 number of extra gaps= 0 total=539 Number of alignments=134 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELR 1gt1A 118 :LFVKLNVEDEDLEKFWKLTEDKGIDKKNV Number of specific fragments extracted= 1 number of extra gaps= 0 total=540 Number of alignments=135 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 31 :DQNMSILEGSLGV 1gt1A 107 :DKHGQTTELTELF T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1gt1A 120 :VKLNVEDEDLEKFWKLTEDKGIDKKN Number of specific fragments extracted= 2 number of extra gaps= 0 total=542 Number of alignments=136 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :ELLRTNDAVLLSAVGALLDGADIGHLVLDQNMS 1gt1A 3 :EEEAEQNLSELSGPWRTVYIGSTNPEKIQENGP T0349 36 :ILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1gt1A 44 :VFDDEKGTVDFYFSVKRDGKWKNVHVKATKQDDGTYVADY Number of specific fragments extracted= 2 number of extra gaps= 0 total=544 Number of alignments=137 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :E 1gt1A 3 :E T0349 5 :LRTNDAVLLSAVGALLDGA 1gt1A 30 :IQENGPFRTYFRELVFDDE T0349 24 :DIGHLVLDQNMSILE 1gt1A 68 :HVKATKQDDGTYVAD T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDAGLAH 1gt1A 114 :ELTELFVKLNVEDEDLEKFWKLTEDKGIDK T0349 70 :ELRSDD 1gt1A 154 :NHPHPE Number of specific fragments extracted= 5 number of extra gaps= 0 total=549 Number of alignments=138 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 2 :RELLRTN 1gt1A 41 :RELVFDD T0349 22 :GAD 1gt1A 48 :EKG T0349 34 :MSILEG 1gt1A 80 :VADYEG T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHE 1gt1A 115 :LTELFVKLNVEDEDLEKFWKLTEDKGIDKK T0349 72 :RSDD 1gt1A 156 :PHPE Number of specific fragments extracted= 5 number of extra gaps= 0 total=554 Number of alignments=139 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1gt1A)Q2 T0349 3 :E 1gt1A 3 :E T0349 4 :LLRTNDA 1gt1A 21 :YIGSTNP T0349 21 :DGAD 1gt1A 47 :DEKG T0349 30 :LDQNMSI 1gt1A 67 :VHVKATK T0349 37 :LEGSLGVIP 1gt1A 83 :YEGQNVFKI T0349 50 :VHEDDLAGARRLLTDAGLAHE 1gt1A 124 :VEDEDLEKFWKLTEDKGIDKK T0349 72 :RSDD 1gt1A 156 :PHPE Number of specific fragments extracted= 7 number of extra gaps= 0 total=561 Number of alignments=140 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLA 1gt1A 118 :LFVKLNVEDEDLEKFWKLTEDKGID Number of specific fragments extracted= 1 number of extra gaps= 0 total=562 Number of alignments=141 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAH 1gt1A 118 :LFVKLNVEDEDLEKFWKLTEDKGIDK Number of specific fragments extracted= 1 number of extra gaps= 0 total=563 Number of alignments=142 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1gt1A 120 :VKLNVEDEDLEKFWKLTEDKGIDKKN Number of specific fragments extracted= 1 number of extra gaps= 0 total=564 Number of alignments=143 # 1gt1A read from 1gt1A/merged-a2m # found chain 1gt1A in template set T0349 50 :VHEDDLAGARRLLTDAGLAHE 1gt1A 124 :VEDEDLEKFWKLTEDKGIDKK Number of specific fragments extracted= 1 number of extra gaps= 0 total=565 Number of alignments=144 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1gnkA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1gnkA/merged-a2m # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)E38 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1gnkA)V53 Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSIL 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFG T0349 42 :GVIPRRVL 1gnkA 54 :NFLPKVKI T0349 50 :VHEDDLAGARRLLTDAGLAHELRSDD 1gnkA 81 :AYTGKIGDGKIFVAELQRVIRIRTGE Number of specific fragments extracted= 3 number of extra gaps= 0 total=568 Number of alignments=145 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)S40 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1gnkA)V53 Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSI 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGF T0349 39 :G 1gnkA 37 :G T0349 42 :GVIPRRV 1gnkA 54 :NFLPKVK T0349 49 :LVHEDDLAGARRLLTDAG 1gnkA 64 :AIADDQLDEVIDIVSKAA T0349 67 :LAHELRSDD 1gnkA 98 :RVIRIRTGE Number of specific fragments extracted= 5 number of extra gaps= 0 total=573 Number of alignments=146 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 47 :RVLVHEDDLAGARRLLTDAGL 1gnkA 5 :TVIIKPFKLEDVREALSSIGI Number of specific fragments extracted= 1 number of extra gaps= 0 total=574 Number of alignments=147 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=574 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)S40 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1gnkA)V53 Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSI 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGF T0349 39 :G 1gnkA 37 :G T0349 42 :GVIPRR 1gnkA 54 :NFLPKV T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1gnkA 63 :VAIADDQLDEVIDIVSKAAYTGKIGDGK Number of specific fragments extracted= 4 number of extra gaps= 0 total=578 Number of alignments=148 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)S40 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1gnkA)V53 Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSI 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGF T0349 39 :G 1gnkA 37 :G T0349 42 :GVIPRR 1gnkA 54 :NFLPKV T0349 48 :VLVHEDDLAGARRLLTDAGLAHE 1gnkA 63 :VAIADDQLDEVIDIVSKAAYTGK T0349 71 :LRSDD 1gnkA 102 :IRTGE Number of specific fragments extracted= 5 number of extra gaps= 0 total=583 Number of alignments=149 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 47 :RVLVHEDDLAGARRLLTDAGL 1gnkA 5 :TVIIKPFKLEDVREALSSIGI Number of specific fragments extracted= 1 number of extra gaps= 0 total=584 Number of alignments=150 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=584 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)E38 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1gnkA)V53 Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSIL 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFG T0349 42 :GVIPRRVL 1gnkA 54 :NFLPKVKI T0349 50 :VHEDDLAGARRLLTDAGLAHELRSDD 1gnkA 81 :AYTGKIGDGKIFVAELQRVIRIRTGE Number of specific fragments extracted= 3 number of extra gaps= 0 total=587 Number of alignments=151 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)S40 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1gnkA)V53 Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSI 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGF T0349 39 :G 1gnkA 37 :G T0349 42 :GVIPRRV 1gnkA 54 :NFLPKVK T0349 49 :LVHEDDLAGARRL 1gnkA 64 :AIADDQLDEVIDI T0349 62 :LTDAGLAHELRSDD 1gnkA 93 :VAELQRVIRIRTGE Number of specific fragments extracted= 5 number of extra gaps= 0 total=592 Number of alignments=152 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 4 :LLRTNDAVLLSAVGALLDGADIGHL 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKI Number of specific fragments extracted= 1 number of extra gaps= 0 total=593 Number of alignments=153 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=593 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)A23 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1gnkA)V53 Warning: unaligning (T0349)E38 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLD 1gnkA 1 :MKLVTVIIKPFKLEDVREALS T0349 22 :G 1gnkA 37 :G T0349 39 :GSLGVIPRRVLVHEDDLAGARRLLTDAGLAHEL 1gnkA 54 :NFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKI T0349 72 :R 1gnkA 103 :R Number of specific fragments extracted= 4 number of extra gaps= 0 total=597 Number of alignments=154 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)E38 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 39 :GSLGVIPRRVLVHEDDL 1gnkA 54 :NFLPKVKIDVAIADDQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=598 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 48 :VLVHEDDLAGARRLLTDAGL 1gnkA 6 :VIIKPFKLEDVREALSSIGI Number of specific fragments extracted= 1 number of extra gaps= 0 total=599 Number of alignments=155 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=599 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLD 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVT T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1gnkA 56 :LPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGK Number of specific fragments extracted= 2 number of extra gaps= 0 total=601 Number of alignments=156 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLD 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVT T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKIGDGK Number of specific fragments extracted= 3 number of extra gaps= 0 total=604 Number of alignments=157 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :M 1gnkA 1 :M T0349 13 :LSAVGALLDGADIGHLVLD 1gnkA 13 :LEDVREALSSIGIQGLTVT T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSD 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKIGDG Number of specific fragments extracted= 4 number of extra gaps= 0 total=608 Number of alignments=158 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :M 1gnkA 1 :M T0349 13 :LSAVGALLDGADIGHLVL 1gnkA 13 :LEDVREALSSIGIQGLTV T0349 42 :GVIPRR 1gnkA 54 :NFLPKV T0349 48 :VLVHEDDLAGARRLLTDA 1gnkA 63 :VAIADDQLDEVIDIVSKA Number of specific fragments extracted= 4 number of extra gaps= 0 total=612 Number of alignments=159 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSILEG 1gnkA 75 :DIVSKAAYTGKIGDGKIFVAELQRVIRIRTG Number of specific fragments extracted= 1 number of extra gaps= 0 total=613 Number of alignments=160 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 51 :HEDDL 1gnkA 66 :ADDQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=614 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRS 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKIGD Number of specific fragments extracted= 2 number of extra gaps= 0 total=616 Number of alignments=161 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 48 :VLVHEDDLAGARRLLTDAGLA 1gnkA 6 :VIIKPFKLEDVREALSSIGIQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=617 Number of alignments=162 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLD 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVT T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1gnkA 56 :LPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGK Number of specific fragments extracted= 2 number of extra gaps= 0 total=619 Number of alignments=163 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLD 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVT T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKIGDGK Number of specific fragments extracted= 3 number of extra gaps= 0 total=622 Number of alignments=164 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLD 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVT T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSD 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKIGDG Number of specific fragments extracted= 3 number of extra gaps= 0 total=625 Number of alignments=165 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MREL 1gnkA 1 :MKLV T0349 9 :DAVLLSAVGALLDGADIGHLVLD 1gnkA 9 :KPFKLEDVREALSSIGIQGLTVT T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDA 1gnkA 62 :DVAIADDQLDEVIDIVSKA Number of specific fragments extracted= 4 number of extra gaps= 0 total=629 Number of alignments=166 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSILEG 1gnkA 75 :DIVSKAAYTGKIGDGKIFVAELQRVIRIRTG Number of specific fragments extracted= 1 number of extra gaps= 0 total=630 Number of alignments=167 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 51 :HEDDL 1gnkA 66 :ADDQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=631 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRS 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKIGD Number of specific fragments extracted= 2 number of extra gaps= 0 total=633 Number of alignments=168 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 16 :VGALLDGADIGHLVLD 1gnkA 16 :VREALSSIGIQGLTVT T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAG 1gnkA 62 :DVAIADDQLDEVIDIVSKAA Number of specific fragments extracted= 3 number of extra gaps= 0 total=636 Number of alignments=169 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLD 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVT T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKIGDGK Number of specific fragments extracted= 3 number of extra gaps= 0 total=639 Number of alignments=170 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLD 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQGLTVT T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKIGDGK Number of specific fragments extracted= 3 number of extra gaps= 0 total=642 Number of alignments=171 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIG 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQ T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSD 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKIGDG Number of specific fragments extracted= 3 number of extra gaps= 0 total=645 Number of alignments=172 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIG 1gnkA 1 :MKLVTVIIKPFKLEDVREALSSIGIQ T0349 42 :GVIPRR 1gnkA 54 :NFLPKV T0349 48 :VLVHEDDLAGARRLLTDA 1gnkA 63 :VAIADDQLDEVIDIVSKA Number of specific fragments extracted= 3 number of extra gaps= 0 total=648 Number of alignments=173 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSILEG 1gnkA 75 :DIVSKAAYTGKIGDGKIFVAELQRVIRIRTG Number of specific fragments extracted= 1 number of extra gaps= 0 total=649 Number of alignments=174 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 50 :VHEDDL 1gnkA 65 :IADDQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=650 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set Warning: unaligning (T0349)L41 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1gnkA)V53 T0349 42 :GVIPR 1gnkA 54 :NFLPK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELR 1gnkA 62 :DVAIADDQLDEVIDIVSKAAYTGKIG Number of specific fragments extracted= 2 number of extra gaps= 0 total=652 Number of alignments=175 # 1gnkA read from 1gnkA/merged-a2m # found chain 1gnkA in template set T0349 48 :VLVHEDDLAGARRLLTDAGLAH 1gnkA 6 :VIIKPFKLEDVREALSSIGIQG Number of specific fragments extracted= 1 number of extra gaps= 0 total=653 Number of alignments=176 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1yj7A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1yj7A/merged-a2m # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGH 1yj7A 21 :KEQLYTGLTEKEANQMQALLLSNDVNV T0349 28 :LVLDQNMS 1yj7A 49 :KEMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 3 number of extra gaps= 0 total=656 Number of alignments=177 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLV 1yj7A 21 :KEQLYTGLTEKEANQMQALLLSNDVNVSK T0349 37 :LEGS 1yj7A 53 :KSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRS 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKKFA T0349 74 :DD 1yj7A 185 :SS Number of specific fragments extracted= 4 number of extra gaps= 0 total=660 Number of alignments=178 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSD 1yj7A 58 :TLSVAAADFVRAITILNNNGFPKKKFAD Number of specific fragments extracted= 1 number of extra gaps= 0 total=661 Number of alignments=179 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKK Number of specific fragments extracted= 1 number of extra gaps= 0 total=662 Number of alignments=180 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMS 1yj7A 21 :KEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSG T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 56 :NMTLSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 2 number of extra gaps= 0 total=664 Number of alignments=181 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRE 1yj7A 20 :MKE T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVLDQNMS 1yj7A 24 :LYTGLTEKEANQMQALLLSNDVNVSKEMDKSG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 3 number of extra gaps= 0 total=667 Number of alignments=182 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSD 1yj7A 58 :TLSVAAADFVRAITILNNNGFPKKKFAD Number of specific fragments extracted= 1 number of extra gaps= 0 total=668 Number of alignments=183 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHEL 1yj7A 56 :NMTLSVAAADFVRAITILNNNGFPKKK Number of specific fragments extracted= 1 number of extra gaps= 0 total=669 Number of alignments=184 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQ 1yj7A 21 :KEQLYTGLTEKEANQMQALLLSNDVNVSKEMD T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 53 :KSGNMTLSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 2 number of extra gaps= 0 total=671 Number of alignments=185 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQ 1yj7A 21 :KEQLYTGLTEKEANQMQALLLSNDVNVSKEMD T0349 46 :RRVLVHEDDLAGARRLLTDAGLAH 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPK T0349 72 :RSDD 1yj7A 183 :KSSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=674 Number of alignments=186 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 48 :VLVHEDDLAGARRLLTDAGL 1yj7A 59 :LSVAAADFVRAITILNNNGF Number of specific fragments extracted= 1 number of extra gaps= 0 total=675 Number of alignments=187 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 15 :AVGALLDGADIGHLVLDQ 1yj7A 35 :QMQALLLSNDVNVSKEMD T0349 46 :RRVLVHEDDLAGARRLLTDAGLA 1yj7A 57 :MTLSVAAADFVRAITILNNNGFP Number of specific fragments extracted= 2 number of extra gaps= 0 total=677 Number of alignments=188 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTND 1yj7A 36 :MQALLLSND Number of specific fragments extracted= 1 number of extra gaps= 0 total=678 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=678 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTN 1yj7A 20 :MKEQLYTG T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSILE 1yj7A 29 :TEKEANQMQALLLSNDVNVSKEMDKSGNMT T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 59 :LSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 3 number of extra gaps= 0 total=681 Number of alignments=189 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTNDAV 1yj7A 20 :MKEQLYTGLTE T0349 12 :LLSAVGALLDGADIGHL 1yj7A 32 :EANQMQALLLSNDVNVS T0349 29 :VLDQNMS 1yj7A 50 :EMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 4 number of extra gaps= 0 total=685 Number of alignments=190 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRE 1yj7A 20 :MKE T0349 9 :DAVLLSAVGALLDGADIGHL 1yj7A 29 :TEKEANQMQALLLSNDVNVS T0349 29 :VLDQNMSI 1yj7A 50 :EMDKSGNM T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 58 :TLSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 4 number of extra gaps= 0 total=689 Number of alignments=191 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRE 1yj7A 20 :MKE T0349 9 :DAVLLSAVGALLDGADIGH 1yj7A 29 :TEKEANQMQALLLSNDVNV T0349 28 :LVLDQNMS 1yj7A 49 :KEMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKK T0349 75 :D 1yj7A 83 :F Number of specific fragments extracted= 5 number of extra gaps= 0 total=694 Number of alignments=192 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 50 :VHEDDLAGARRLLTDAGLA 1yj7A 61 :VAAADFVRAITILNNNGFP Number of specific fragments extracted= 1 number of extra gaps= 0 total=695 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 48 :VLVHEDDLAGARRLLTDAGLAHE 1yj7A 59 :LSVAAADFVRAITILNNNGFPKK Number of specific fragments extracted= 1 number of extra gaps= 0 total=696 Number of alignments=193 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 16 :VGALLDGADIGHL 1yj7A 36 :MQALLLSNDVNVS T0349 29 :VLDQNMSI 1yj7A 50 :EMDKSGNM T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSD 1yj7A 58 :TLSVAAADFVRAITILNNNGFPKKKFAD Number of specific fragments extracted= 3 number of extra gaps= 0 total=699 Number of alignments=194 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 13 :LSAVGALLDGADIGH 1yj7A 33 :ANQMQALLLSNDVNV T0349 28 :LVLDQNMS 1yj7A 49 :KEMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=702 Number of alignments=195 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTN 1yj7A 20 :MKEQLYTG T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSILE 1yj7A 29 :TEKEANQMQALLLSNDVNVSKEMDKSGNMT T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 59 :LSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 3 number of extra gaps= 0 total=705 Number of alignments=196 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTNDAV 1yj7A 20 :MKEQLYTGLTE T0349 12 :LLSAVGALLDGADIGHL 1yj7A 32 :EANQMQALLLSNDVNVS T0349 29 :VLDQNMS 1yj7A 50 :EMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 4 number of extra gaps= 0 total=709 Number of alignments=197 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTN 1yj7A 20 :MKEQLYTG T0349 9 :DAVLLSAVGALLDGADIGHL 1yj7A 29 :TEKEANQMQALLLSNDVNVS T0349 29 :VLDQNMS 1yj7A 50 :EMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 4 number of extra gaps= 0 total=713 Number of alignments=198 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTN 1yj7A 20 :MKEQLYTG T0349 9 :DAVLLSAVGALLDGADIGHL 1yj7A 29 :TEKEANQMQALLLSNDVNVS T0349 29 :VLDQNMS 1yj7A 50 :EMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKK T0349 74 :D 1yj7A 83 :F Number of specific fragments extracted= 5 number of extra gaps= 0 total=718 Number of alignments=199 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 50 :VHEDDLAGARRLLTDAGLA 1yj7A 61 :VAAADFVRAITILNNNGFP Number of specific fragments extracted= 1 number of extra gaps= 0 total=719 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 48 :VLVHEDDLAGARRLLTDAGLAHE 1yj7A 59 :LSVAAADFVRAITILNNNGFPKK Number of specific fragments extracted= 1 number of extra gaps= 0 total=720 Number of alignments=200 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 14 :SAVGALLDGADIGHL 1yj7A 34 :NQMQALLLSNDVNVS T0349 29 :VLDQNMS 1yj7A 50 :EMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSD 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKKFAD Number of specific fragments extracted= 3 number of extra gaps= 0 total=723 Number of alignments=201 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 10 :AVLLSAVGALLDGADIGHL 1yj7A 30 :EKEANQMQALLLSNDVNVS T0349 29 :VLDQNMS 1yj7A 50 :EMDKSGN T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1yj7A 57 :MTLSVAAADFVRAITILNNNGFPKKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=726 Number of alignments=202 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTN 1yj7A 20 :MKEQLYTG T0349 9 :DAVLLSAVGALLDGADIGHL 1yj7A 29 :TEKEANQMQALLLSNDVNVS T0349 29 :VLDQNMSIL 1yj7A 50 :EMDKSGNMT T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1yj7A 59 :LSVAAADFVRAITILNNNGFPKKKFADI Number of specific fragments extracted= 4 number of extra gaps= 0 total=730 Number of alignments=203 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTN 1yj7A 20 :MKEQLYTG T0349 9 :DAVLLSAVGALLDGADIGHL 1yj7A 29 :TEKEANQMQALLLSNDVNVS T0349 29 :VLDQNMSI 1yj7A 50 :EMDKSGNM T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSD 1yj7A 58 :TLSVAAADFVRAITILNNNGFPKKKFAD Number of specific fragments extracted= 4 number of extra gaps= 0 total=734 Number of alignments=204 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTN 1yj7A 20 :MKEQLYTG T0349 11 :VLLSAVGALLDGADIG 1yj7A 31 :KEANQMQALLLSNDVN T0349 36 :ILEGSL 1yj7A 50 :EMDKSG T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSD 1yj7A 56 :NMTLSVAAADFVRAITILNNNGFPKKKFAD Number of specific fragments extracted= 4 number of extra gaps= 0 total=738 Number of alignments=205 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTN 1yj7A 20 :MKEQLYTG T0349 9 :DAVLLSAVGALLDGADIG 1yj7A 29 :TEKEANQMQALLLSNDVN T0349 30 :LDQN 1yj7A 51 :MDKS T0349 39 :G 1yj7A 55 :G T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1yj7A 56 :NMTLSVAAADFVRAITILNNNGFPK T0349 73 :SDD 1yj7A 81 :KKF Number of specific fragments extracted= 6 number of extra gaps= 0 total=744 Number of alignments=206 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 50 :VHEDDLAGARRLLTDAGLA 1yj7A 61 :VAAADFVRAITILNNNGFP Number of specific fragments extracted= 1 number of extra gaps= 0 total=745 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 48 :VLVHEDDLAGARRLLTDAGLAHE 1yj7A 59 :LSVAAADFVRAITILNNNGFPKK Number of specific fragments extracted= 1 number of extra gaps= 0 total=746 Number of alignments=207 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 16 :VGALLDGADIG 1yj7A 36 :MQALLLSNDVN T0349 36 :ILEGSL 1yj7A 50 :EMDKSG T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSD 1yj7A 56 :NMTLSVAAADFVRAITILNNNGFPKKKFAD Number of specific fragments extracted= 3 number of extra gaps= 0 total=749 Number of alignments=208 # 1yj7A read from 1yj7A/merged-a2m # found chain 1yj7A in template set T0349 1 :MRELLRTN 1yj7A 20 :MKEQLYTG T0349 9 :DAVLLSAVGALLDGADIG 1yj7A 29 :TEKEANQMQALLLSNDVN T0349 30 :LDQN 1yj7A 51 :MDKS T0349 39 :G 1yj7A 55 :G T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1yj7A 56 :NMTLSVAAADFVRAITILNNNGFPKK T0349 74 :D 1yj7A 82 :K Number of specific fragments extracted= 6 number of extra gaps= 0 total=755 Number of alignments=209 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1nm2A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1nm2A/merged-a2m # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 2 :RELLRTNDAVL 1nm2A 27 :ADRVAAWSDAI T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRRVLVH 1nm2A 38 :GLDLAHFGTKADADEIRDTSVAQPLLVAAG T0349 52 :EDDLAGARRLLTDAGL 1nm2A 142 :GGDPEVSVAHLERLGL T0349 68 :AHELRSDD 1nm2A 191 :VVPLKVAG Number of specific fragments extracted= 4 number of extra gaps= 0 total=759 Number of alignments=210 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 2 :RELLRTNDAVL 1nm2A 27 :ADRVAAWSDAI T0349 22 :GADIGHLVLDQNMSIL 1nm2A 38 :GLDLAHFGTKADADEI T0349 38 :EG 1nm2A 153 :ER T0349 40 :SLGVI 1nm2A 185 :PEGVR T0349 45 :PRRVLVHEDDLAGARRLLT 1nm2A 195 :KVAGAFHTRHMAPAVDKLA T0349 64 :DAGLAHELR 1nm2A 239 :SGTEVLDRL Number of specific fragments extracted= 6 number of extra gaps= 0 total=765 Number of alignments=211 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELLRTNDAVL 1nm2A 26 :AADRVAAWSDAI T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRRVLVH 1nm2A 38 :GLDLAHFGTKADADEIRDTSVAQPLLVAAG Number of specific fragments extracted= 2 number of extra gaps= 0 total=767 Number of alignments=212 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 9 :DAVL 1nm2A 34 :SDAI T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRRVLV 1nm2A 38 :GLDLAHFGTKADADEIRDTSVAQPLLVAA Number of specific fragments extracted= 2 number of extra gaps= 0 total=769 Number of alignments=213 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELLRTNDAVL 1nm2A 26 :AADRVAAWSDAI T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRRVLVH 1nm2A 38 :GLDLAHFGTKADADEIRDTSVAQPLLVAAG T0349 52 :EDDLAGARRLLTD 1nm2A 142 :GGDPEVSVAHLER T0349 65 :AGLAHE 1nm2A 178 :AALNED T0349 72 :RSDD 1nm2A 184 :KPEG Number of specific fragments extracted= 5 number of extra gaps= 0 total=774 Number of alignments=214 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Warning: unaligning (T0349)G42 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1nm2A)G87 T0349 2 :RELLR 1nm2A 18 :TDWLA T0349 7 :TNDAVL 1nm2A 32 :AWSDAI T0349 22 :GADIGHLVLDQNMSILEG 1nm2A 38 :GLDLAHFGTKADADEIRD T0349 43 :VIPRRV 1nm2A 88 :FTPGAV T0349 49 :LV 1nm2A 139 :AL T0349 51 :HEDDLAGARRL 1nm2A 173 :TMEQLAALNED T0349 63 :TDAG 1nm2A 184 :KPEG T0349 67 :LAHEL 1nm2A 242 :EVLDR T0349 72 :RSD 1nm2A 289 :LPG Number of specific fragments extracted= 9 number of extra gaps= 0 total=783 Number of alignments=215 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELLRTNDAVL 1nm2A 26 :AADRVAAWSDAI T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRRVLVH 1nm2A 38 :GLDLAHFGTKADADEIRDTSVAQPLLVAAG Number of specific fragments extracted= 2 number of extra gaps= 0 total=785 Number of alignments=216 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 9 :DAVL 1nm2A 34 :SDAI T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRRVLV 1nm2A 38 :GLDLAHFGTKADADEIRDTSVAQPLLVAA Number of specific fragments extracted= 2 number of extra gaps= 0 total=787 Number of alignments=217 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELLRTNDAVL 1nm2A 26 :AADRVAAWSDAI T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRRVLV 1nm2A 38 :GLDLAHFGTKADADEIRDTSVAQPLLVAA T0349 51 :HEDDLAGARRLLTDAG 1nm2A 173 :TMEQLAALNEDKPEGV T0349 67 :LAHELRSD 1nm2A 190 :KVVPLKVA Number of specific fragments extracted= 4 number of extra gaps= 0 total=791 Number of alignments=218 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELLRTNDAVL 1nm2A 26 :AADRVAAWSDAI T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRRVLV 1nm2A 38 :GLDLAHFGTKADADEIRDTSVAQPLLVAA T0349 51 :HEDDLAGARRLLTDAGL 1nm2A 173 :TMEQLAALNEDKPEGVR T0349 68 :AHELRSD 1nm2A 285 :AKRALPG T0349 75 :D 1nm2A 314 :T Number of specific fragments extracted= 5 number of extra gaps= 0 total=796 Number of alignments=219 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELLRTNDAVL 1nm2A 26 :AADRVAAWSDAI T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRRVLV 1nm2A 38 :GLDLAHFGTKADADEIRDTSVAQPLLVAA Number of specific fragments extracted= 2 number of extra gaps= 0 total=798 Number of alignments=220 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRRV 1nm2A 38 :GLDLAHFGTKADADEIRDTSVAQPLLV Number of specific fragments extracted= 1 number of extra gaps= 0 total=799 Number of alignments=221 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 49 :LVHEDDLAGARRLLTD 1nm2A 297 :LKTPDDLDAARELVAE Number of specific fragments extracted= 1 number of extra gaps= 0 total=800 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=800 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELL 1nm2A 0 :HMLVL T0349 6 :RTNDAVLLSAVGALLDGADI 1nm2A 49 :DADEIRDTSVAQPLLVAAGI T0349 26 :GHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGAR 1nm2A 95 :GHSVGEITAAVFAGVLDDTAALSLVRRRGLAMAE T0349 60 :RLLTDAGLAHELRSDD 1nm2A 130 :AAVTETGMSALLGGDP Number of specific fragments extracted= 4 number of extra gaps= 0 total=804 Number of alignments=222 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELL 1nm2A 0 :HMLVL T0349 8 :NDAVLL 1nm2A 18 :TDWLAL T0349 14 :SAVGALLDGADI 1nm2A 57 :SVAQPLLVAAGI T0349 36 :ILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRS 1nm2A 93 :VAGHSVGEITAAVFAGVLDDTAALSLVRRRGLAMAEAA Number of specific fragments extracted= 4 number of extra gaps= 0 total=808 Number of alignments=223 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Warning: unaligning (T0349)D24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1nm2A)G87 T0349 1 :M 1nm2A 0 :H T0349 3 :ELLRTND 1nm2A 51 :DEIRDTS T0349 10 :AVLLSA 1nm2A 61 :PLLVAA T0349 16 :VGALL 1nm2A 71 :AAALG T0349 25 :I 1nm2A 88 :F T0349 26 :GHLVLDQNMS 1nm2A 90 :PGAVAGHSVG T0349 36 :ILEGSLG 1nm2A 105 :VFAGVLD T0349 43 :VIPRRVLV 1nm2A 135 :TGMSALLG T0349 53 :DDLAGARRLLTDAGLA 1nm2A 143 :GDPEVSVAHLERLGLT Number of specific fragments extracted= 9 number of extra gaps= 0 total=817 Number of alignments=224 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Warning: unaligning (T0349)G22 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1nm2A)G87 T0349 1 :M 1nm2A 0 :H T0349 2 :RELLRTNDAVLLSAVGALL 1nm2A 51 :DEIRDTSVAQPLLVAAGIL T0349 23 :ADIGHLVLD 1nm2A 88 :FTPGAVAGH T0349 36 :ILEGSLG 1nm2A 105 :VFAGVLD T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1nm2A 135 :TGMSALLGGDPEVSVAHLERLGLTP Number of specific fragments extracted= 5 number of extra gaps= 0 total=822 Number of alignments=225 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 52 :EDDLAGARRLLTD 1nm2A 300 :PDDLDAARELVAE Number of specific fragments extracted= 1 number of extra gaps= 0 total=823 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=823 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 7 :TNDAVLLSAVGALLDGADIGHLVLDQNMSILEG 1nm2A 251 :VANPVRWDLCMETFKELGVTAIIEVCPGGTLTG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDA 1nm2A 288 :ALPGVKTLALKTPDDLDAARELVAEH Number of specific fragments extracted= 2 number of extra gaps= 0 total=825 Number of alignments=226 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 13 :LSAVGALLDGADIGHLVLDQNMSILEG 1nm2A 257 :WDLCMETFKELGVTAIIEVCPGGTLTG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDA 1nm2A 288 :ALPGVKTLALKTPDDLDAARELVAEH Number of specific fragments extracted= 2 number of extra gaps= 0 total=827 Number of alignments=227 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELL 1nm2A 0 :HMLVL T0349 6 :RTNDAVLLSAVGALLDGADI 1nm2A 49 :DADEIRDTSVAQPLLVAAGI T0349 26 :GHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGAR 1nm2A 95 :GHSVGEITAAVFAGVLDDTAALSLVRRRGLAMAE T0349 60 :RLLTDAGLAHELRSDD 1nm2A 130 :AAVTETGMSALLGGDP Number of specific fragments extracted= 4 number of extra gaps= 0 total=831 Number of alignments=228 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELL 1nm2A 0 :HMLVL T0349 8 :NDAVLL 1nm2A 18 :TDWLAL T0349 14 :SAVGALLDGADI 1nm2A 57 :SVAQPLLVAAGI T0349 36 :ILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRS 1nm2A 93 :VAGHSVGEITAAVFAGVLDDTAALSLVRRRGLAMAEAA Number of specific fragments extracted= 4 number of extra gaps= 0 total=835 Number of alignments=229 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Warning: unaligning (T0349)D21 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1nm2A)G87 T0349 1 :MRELL 1nm2A 0 :HMLVL T0349 10 :A 1nm2A 61 :P T0349 11 :VLLSAVGALL 1nm2A 66 :AGILSAAALG T0349 26 :GHLVLDQN 1nm2A 90 :PGAVAGHS T0349 34 :MSILEGS 1nm2A 137 :MSALLGG T0349 41 :LGVIPRRV 1nm2A 155 :LGLTPANV Number of specific fragments extracted= 6 number of extra gaps= 0 total=841 Number of alignments=230 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :MRELL 1nm2A 0 :HMLVL T0349 8 :NDAVLLSAVG 1nm2A 111 :DDTAALSLVR T0349 18 :ALLDGADIGHLVLDQNMSIL 1nm2A 150 :AHLERLGLTPANVNGAGQIV T0349 38 :EGSLGVIPRRV 1nm2A 186 :EGVRKVVPLKV T0349 53 :DDLAGARRLLTDA 1nm2A 203 :RHMAPAVDKLAEA T0349 66 :GLAH 1nm2A 218 :ALTP Number of specific fragments extracted= 6 number of extra gaps= 0 total=847 Number of alignments=231 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 52 :EDDLAGARRLLTD 1nm2A 300 :PDDLDAARELVAE Number of specific fragments extracted= 1 number of extra gaps= 0 total=848 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=848 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSILEG 1nm2A 253 :NPVRWDLCMETFKELGVTAIIEVCPGGTLTG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDA 1nm2A 288 :ALPGVKTLALKTPDDLDAARELVAEH Number of specific fragments extracted= 2 number of extra gaps= 0 total=850 Number of alignments=232 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 13 :LSAVGALLDGADIGHLVLDQNMSILEG 1nm2A 257 :WDLCMETFKELGVTAIIEVCPGGTLTG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDA 1nm2A 288 :ALPGVKTLALKTPDDLDAARELVAEH Number of specific fragments extracted= 2 number of extra gaps= 0 total=852 Number of alignments=233 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Warning: unaligning (T0349)H69 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1nm2A)G87 T0349 1 :MRELLRTND 1nm2A 0 :HMLVLVAPG T0349 10 :AVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLV 1nm2A 24 :PGAADRVAAWSDAIGLDLAHFGTKADADEIRDTSVAQPLLV T0349 58 :ARRLLTDAGLA 1nm2A 65 :AAGILSAAALG Number of specific fragments extracted= 3 number of extra gaps= 0 total=855 Number of alignments=234 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Warning: unaligning (T0349)T63 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1nm2A)G87 T0349 1 :MRELL 1nm2A 0 :HMLVL T0349 8 :NDAVLL 1nm2A 18 :TDWLAL T0349 14 :SAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGA 1nm2A 28 :DRVAAWSDAIGLDLAHFGTKADADEIRDTSVAQPLLVAAGILSAA T0349 60 :RLL 1nm2A 73 :ALG Number of specific fragments extracted= 4 number of extra gaps= 0 total=859 Number of alignments=235 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Warning: unaligning (T0349)D24 because first residue in template chain is (1nm2A)H0 T0349 25 :IGHLVLDQNMSILEGSLG 1nm2A 1 :MLVLVAPGQGAQTPGFLT T0349 47 :RVLVHEDDLAGARRLLTDAGLA 1nm2A 19 :DWLALPGAADRVAAWSDAIGLD Number of specific fragments extracted= 2 number of extra gaps= 0 total=861 Number of alignments=236 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 1 :M 1nm2A 0 :H T0349 51 :HEDDLAGARRLLTDAGLA 1nm2A 23 :LPGAADRVAAWSDAIGLD Number of specific fragments extracted= 2 number of extra gaps= 0 total=863 Number of alignments=237 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 52 :EDDLAGARRLLTD 1nm2A 300 :PDDLDAARELVAE Number of specific fragments extracted= 1 number of extra gaps= 0 total=864 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=864 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 7 :TNDAVLLSAVGALLDGADIGHLVLDQNMSILEG 1nm2A 251 :VANPVRWDLCMETFKELGVTAIIEVCPGGTLTG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDA 1nm2A 288 :ALPGVKTLALKTPDDLDAARELVAEH Number of specific fragments extracted= 2 number of extra gaps= 0 total=866 Number of alignments=238 # 1nm2A read from 1nm2A/merged-a2m # found chain 1nm2A in template set T0349 8 :NDAVLLSAVGALLDGADIGHLVLDQNMSILEG 1nm2A 252 :ANPVRWDLCMETFKELGVTAIIEVCPGGTLTG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDA 1nm2A 288 :ALPGVKTLALKTPDDLDAARELVAEH Number of specific fragments extracted= 2 number of extra gaps= 0 total=868 Number of alignments=239 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ipd/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ipd expands to /projects/compbio/data/pdb/1ipd.pdb.gz 1ipd:Warning: there is no chain 1ipd will retry with 1ipdA # T0349 read from 1ipd/merged-a2m # 1ipd read from 1ipd/merged-a2m # adding 1ipd to template set # found chain 1ipd in template set Warning: unaligning (T0349)R72 because last residue in template chain is (1ipd)A345 T0349 2 :RELLRTNDAVLLSAVGA 1ipd 58 :RKGVEEAEAVLLGSVGG T0349 19 :LLDGA 1ipd 79 :GLPRK T0349 24 :D 1ipd 127 :D T0349 25 :IGHL 1ipd 211 :LEHQ T0349 29 :VLDQNMSILEGSLGVIPRRVLVHE 1ipd 242 :ILSDLASVLPGSLGLLPSASLGRG T0349 53 :DDLAGARR 1ipd 277 :PDIAGKGI T0349 61 :LLTDAGLA 1ipd 290 :AILSAAMM T0349 69 :HEL 1ipd 342 :RHL Number of specific fragments extracted= 8 number of extra gaps= 0 total=876 Number of alignments=240 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAG 1ipd 4 :AVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGG Number of specific fragments extracted= 1 number of extra gaps= 0 total=877 Number of alignments=241 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set Warning: unaligning (T0349)D53 because of BadResidue code BAD_PEPTIDE in next template residue (1ipd)E306 Warning: unaligning (T0349)D54 because of BadResidue code BAD_PEPTIDE at template residue (1ipd)E306 T0349 1 :MRELLRTNDAVLLSAVGALLDGA 1ipd 57 :TRKGVEEAEAVLLGSVGGPKWDG T0349 24 :DIGHL 1ipd 108 :VFPGL T0349 29 :VLDQNMSILEGSLGVIPRRVL 1ipd 242 :ILSDLASVLPGSLGLLPSASL T0349 50 :VHE 1ipd 302 :FGL T0349 55 :LAGARRLLTDAGLAHE 1ipd 307 :LARKVEDAVAKALLET T0349 72 :RSDD 1ipd 323 :PPPD Number of specific fragments extracted= 6 number of extra gaps= 1 total=883 Number of alignments=242 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set Warning: unaligning (T0349)A56 because of BadResidue code BAD_PEPTIDE in next template residue (1ipd)E306 Warning: unaligning (T0349)G57 because of BadResidue code BAD_PEPTIDE at template residue (1ipd)E306 T0349 1 :M 1ipd 1 :M T0349 2 :RELLRTNDAVLLSAVGALLDGA 1ipd 58 :RKGVEEAEAVLLGSVGGPKWDG T0349 24 :DI 1ipd 127 :DV T0349 26 :GHL 1ipd 212 :EHQ T0349 29 :VLDQNMSILEGSLGVIPRRVL 1ipd 242 :ILSDLASVLPGSLGLLPSASL T0349 50 :VHEDDL 1ipd 299 :EHAFGL T0349 58 :ARRLLT 1ipd 307 :LARKVE T0349 64 :DAGLAHELRSD 1ipd 320 :LETPPPDLGGS Number of specific fragments extracted= 8 number of extra gaps= 1 total=891 Number of alignments=243 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHE 1ipd 4 :AVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEP Number of specific fragments extracted= 1 number of extra gaps= 0 total=892 Number of alignments=244 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAG 1ipd 4 :AVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEP Number of specific fragments extracted= 1 number of extra gaps= 0 total=893 Number of alignments=245 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 29 :VLDQNMSILEGSLGVIP 1ipd 242 :ILSDLASVLPGSLGLLP Number of specific fragments extracted= 1 number of extra gaps= 0 total=894 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 27 :HLVLDQNMSILEGSLGVIPRRV 1ipd 240 :GDILSDLASVLPGSLGLLPSAS Number of specific fragments extracted= 1 number of extra gaps= 0 total=895 Number of alignments=246 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :MR 1ipd 1 :MK T0349 17 :GALLDGADIGHLVLDQNMSIL 1ipd 3 :VAVLPGDGIGPEVTEAALKVL T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1ipd 24 :RALDEAEGLGLAYEVFPFGGAAIDAFGEP Number of specific fragments extracted= 3 number of extra gaps= 0 total=898 Number of alignments=247 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :MRELLRTNDAV 1ipd 1 :MKVAVLPGDGI T0349 12 :LLSAVGALLD 1ipd 19 :ALKVLRALDE T0349 22 :GADIGHLV 1ipd 43 :GAAIDAFG T0349 30 :LDQNMSILEGSLG 1ipd 61 :VEEAEAVLLGSVG T0349 44 :IPRRV 1ipd 80 :LPRKI T0349 49 :LVHEDDLAGARRLLTDAG 1ipd 90 :LLSLRKSQDLFANLRPAK Number of specific fragments extracted= 6 number of extra gaps= 0 total=904 Number of alignments=248 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :M 1ipd 1 :M T0349 4 :LLRTNDAVLLSAVGALLDGADIG 1ipd 11 :IGPEVTEAALKVLRALDEAEGLG T0349 27 :HLVLD 1ipd 36 :YEVFP T0349 32 :QNMSILEGSLGV 1ipd 63 :EAEAVLLGSVGG T0349 69 :HELRSDD 1ipd 75 :PKWDGLP Number of specific fragments extracted= 5 number of extra gaps= 0 total=909 Number of alignments=249 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :M 1ipd 1 :M T0349 6 :RTNDAVLLSAVGALLDGADIG 1ipd 13 :PEVTEAALKVLRALDEAEGLG T0349 27 :HLVLD 1ipd 36 :YEVFP T0349 32 :QNMSILEGSLG 1ipd 63 :EAEAVLLGSVG T0349 50 :VHEDDL 1ipd 80 :LPRKIS T0349 56 :AGARRLLTDA 1ipd 87 :ETGLLSLRKS Number of specific fragments extracted= 6 number of extra gaps= 0 total=915 Number of alignments=250 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPR 1ipd 236 :GNIFGDILSDLASVLPGSLGLLPS Number of specific fragments extracted= 1 number of extra gaps= 0 total=916 Number of alignments=251 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPRRV 1ipd 236 :GNIFGDILSDLASVLPGSLGLLPSAS Number of specific fragments extracted= 1 number of extra gaps= 0 total=917 Number of alignments=252 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 34 :MSILEGSLGVIPRRVL 1ipd 247 :ASVLPGSLGLLPSASL Number of specific fragments extracted= 1 number of extra gaps= 0 total=918 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 11 :VLLSAVGALLDGADIGHLVLDQNMS 1ipd 164 :RVARVAFEAARKRRKHVVSVDKANV T0349 52 :EDDLAGARRLLTDA 1ipd 189 :LEVGEFWRKTVEEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=920 Number of alignments=253 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :MR 1ipd 1 :MK T0349 17 :GALLDGADIGHLVLDQNMSIL 1ipd 3 :VAVLPGDGIGPEVTEAALKVL T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1ipd 24 :RALDEAEGLGLAYEVFPFGGAAIDAFGEP Number of specific fragments extracted= 3 number of extra gaps= 0 total=923 Number of alignments=254 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :MRELLRTNDAV 1ipd 1 :MKVAVLPGDGI T0349 12 :LLSAVGALLD 1ipd 19 :ALKVLRALDE T0349 22 :GADIGHLV 1ipd 43 :GAAIDAFG T0349 30 :LDQNMSILEGSLG 1ipd 61 :VEEAEAVLLGSVG T0349 44 :IPRRV 1ipd 80 :LPRKI T0349 49 :LVHEDDLAGARRLLTDAG 1ipd 90 :LLSLRKSQDLFANLRPAK Number of specific fragments extracted= 6 number of extra gaps= 0 total=929 Number of alignments=255 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :MRELLRTND 1ipd 1 :MKVAVLPGD T0349 10 :AVLLSAVGALL 1ipd 17 :EAALKVLRALD T0349 21 :DGADIGHLVLDQNMSILEGSLGVIP 1ipd 30 :EGLGLAYEVFPFGGAAIDAFGEPFP T0349 56 :AGARRLLTDAG 1ipd 55 :EPTRKGVEEAE T0349 68 :AHELRSDD 1ipd 74 :GPKWDGLP Number of specific fragments extracted= 5 number of extra gaps= 0 total=934 Number of alignments=256 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :MRELL 1ipd 1 :MKVAV T0349 7 :TNDAVLLSAVGALLD 1ipd 10 :GIGPEVTEAALKVLR T0349 22 :GADIGHLVLD 1ipd 31 :GLGLAYEVFP T0349 42 :GVIP 1ipd 51 :EPFP T0349 56 :AGARRLLTDAG 1ipd 55 :EPTRKGVEEAE T0349 68 :AHELRSDD 1ipd 74 :GPKWDGLP Number of specific fragments extracted= 6 number of extra gaps= 0 total=940 Number of alignments=257 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPR 1ipd 236 :GNIFGDILSDLASVLPGSLGLLPS Number of specific fragments extracted= 1 number of extra gaps= 0 total=941 Number of alignments=258 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPRRV 1ipd 236 :GNIFGDILSDLASVLPGSLGLLPSAS Number of specific fragments extracted= 1 number of extra gaps= 0 total=942 Number of alignments=259 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 34 :MSILEGSLGVIPRRVL 1ipd 247 :ASVLPGSLGLLPSASL Number of specific fragments extracted= 1 number of extra gaps= 0 total=943 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 11 :VLLSAVGALLDGADIGHLVLDQNMSI 1ipd 164 :RVARVAFEAARKRRKHVVSVDKANVL T0349 53 :DDLAGARRLLTDA 1ipd 190 :EVGEFWRKTVEEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=945 Number of alignments=260 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :MRELLRTNDAVLLSAVGALL 1ipd 1 :MKVAVLPGDGIGPEVTEAAL T0349 21 :DGADIGHLVLDQNMSILEGSLGVIPRR 1ipd 30 :EGLGLAYEVFPFGGAAIDAFGEPFPEP T0349 51 :HEDDLAGARRLLTDAGLAHELRSDD 1ipd 57 :TRKGVEEAEAVLLGSVGGPKWDGLP Number of specific fragments extracted= 3 number of extra gaps= 0 total=948 Number of alignments=261 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :MRELLRTNDAVLLSAVGALLD 1ipd 1 :MKVAVLPGDGIGPEVTEAALK T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRR 1ipd 31 :GLGLAYEVFPFGGAAIDAFGEPFPEP T0349 51 :HEDDLAGARRLLTD 1ipd 57 :TRKGVEEAEAVLLG T0349 65 :AGLAHELRS 1ipd 78 :DGLPRKISP Number of specific fragments extracted= 4 number of extra gaps= 0 total=952 Number of alignments=262 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :MRELLRTND 1ipd 1 :MKVAVLPGD T0349 10 :AVLLSAVGALL 1ipd 17 :EAALKVLRALD T0349 21 :DG 1ipd 30 :EG T0349 23 :ADIGHLVLD 1ipd 62 :EEAEAVLLG T0349 35 :SILEGSLGVIPRRV 1ipd 71 :SVGGPKWDGLPRKI T0349 54 :DLAGARRLLTD 1ipd 85 :SPETGLLSLRK T0349 65 :AGLAHELRSD 1ipd 110 :PGLERLSPLK Number of specific fragments extracted= 7 number of extra gaps= 0 total=959 Number of alignments=263 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 1 :MR 1ipd 1 :MK T0349 10 :AVLLSAVGALLD 1ipd 13 :PEVTEAALKVLR T0349 22 :GADIGHLVLDQNMSILEGSLGVIP 1ipd 31 :GLGLAYEVFPFGGAAIDAFGEPFP T0349 56 :AGARRLLTDAG 1ipd 55 :EPTRKGVEEAE T0349 68 :AHELRSDD 1ipd 74 :GPKWDGLP Number of specific fragments extracted= 5 number of extra gaps= 0 total=964 Number of alignments=264 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIP 1ipd 236 :GNIFGDILSDLASVLPGSLGLLP Number of specific fragments extracted= 1 number of extra gaps= 0 total=965 Number of alignments=265 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 24 :DIGHLVLDQNMSILEGSLGVIPRR 1ipd 237 :NIFGDILSDLASVLPGSLGLLPSA Number of specific fragments extracted= 1 number of extra gaps= 0 total=966 Number of alignments=266 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 13 :LSAVGALLDGADIGHLVLDQN 1ipd 166 :ARVAFEAARKRRKHVVSVDKA Number of specific fragments extracted= 1 number of extra gaps= 0 total=967 Number of alignments=267 # 1ipd read from 1ipd/merged-a2m # found chain 1ipd in template set T0349 12 :LLSAVGALLDGADIGHLVLDQNMS 1ipd 165 :VARVAFEAARKRRKHVVSVDKANV T0349 52 :EDDLAGARRLLTDA 1ipd 189 :LEVGEFWRKTVEEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=969 Number of alignments=268 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1a3yA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1a3yA/merged-a2m # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MRELLRTND 1a3yA 39 :MRSIEFDDK T0349 10 :AVLLSAVGALLDGADIGHLVLDQNMSILEGS 1a3yA 80 :VNYAGNNKFVVSYASETALIISNINVDEEGD T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1a3yA 115 :TGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNI Number of specific fragments extracted= 3 number of extra gaps= 0 total=972 Number of alignments=269 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :M 1a3yA 9 :P T0349 2 :RELLRTND 1a3yA 40 :RSIEFDDK T0349 10 :AVL 1a3yA 49 :SKV T0349 13 :LSAVGALLD 1a3yA 66 :FSLIGTKQE T0349 22 :GADIGHLVLDQNMSILEGS 1a3yA 92 :YASETALIISNINVDEEGD T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1a3yA 115 :TGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNI Number of specific fragments extracted= 6 number of extra gaps= 0 total=978 Number of alignments=270 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 38 :EGSLGVIPRRVLVHED 1a3yA 32 :NAPFQVFMRSIEFDDK Number of specific fragments extracted= 1 number of extra gaps= 0 total=979 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 38 :EGSLGVIPRRVLVHE 1a3yA 32 :NAPFQVFMRSIEFDD Number of specific fragments extracted= 1 number of extra gaps= 0 total=980 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 17 :GALLDG 1a3yA 33 :APFQVF T0349 23 :ADIGHLVLDQNMS 1a3yA 93 :ASETALIISNINV T0349 37 :LEGSLGVIPRR 1a3yA 111 :KTIMTGLLGKG T0349 49 :LVHEDDLAGARRLLTDAGLAHEL 1a3yA 123 :DIEDQDLEKFKEVTRENGIPEEN T0349 73 :SDD 1a3yA 154 :DCP Number of specific fragments extracted= 5 number of extra gaps= 0 total=985 Number of alignments=271 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=985 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHE 1a3yA 116 :GLLGKGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=986 Number of alignments=272 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=986 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MRELLR 1a3yA 9 :PFELSG T0349 14 :SAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1a3yA 15 :KWITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGN Number of specific fragments extracted= 2 number of extra gaps= 0 total=988 Number of alignments=273 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MREL 1a3yA 9 :PFEL T0349 5 :LRTNDAVLLS 1a3yA 21 :IGSSDLEKIG T0349 15 :AVG 1a3yA 55 :FFS T0349 21 :DGADI 1a3yA 58 :KENGI T0349 26 :GHLVLDQNM 1a3yA 74 :EGNTYDVNY T0349 38 :EG 1a3yA 108 :EG T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSD 1a3yA 116 :GLLGKGTDIEDQDLEKFKEVTRENGIPEENIVN Number of specific fragments extracted= 7 number of extra gaps= 0 total=995 Number of alignments=274 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MREL 1a3yA 9 :PFEL T0349 18 :ALLDGADI 1a3yA 28 :KIGENAPF T0349 26 :GHLVLDQNMS 1a3yA 40 :RSIEFDDKES T0349 38 :EGSLGVIPRRVL 1a3yA 108 :EGDKTIMTGLLG T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1a3yA 124 :IEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1a3yA 154 :DCPA Number of specific fragments extracted= 6 number of extra gaps= 0 total=1001 Number of alignments=275 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :M 1a3yA 9 :P T0349 19 :LL 1a3yA 28 :KI T0349 21 :DGAD 1a3yA 31 :ENAP T0349 25 :IGHLVLDQNMS 1a3yA 39 :MRSIEFDDKES T0349 38 :EGSLGVIPRRV 1a3yA 108 :EGDKTIMTGLL T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1a3yA 124 :IEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1a3yA 154 :DCPA Number of specific fragments extracted= 7 number of extra gaps= 0 total=1008 Number of alignments=276 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHE 1a3yA 116 :GLLGKGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1009 Number of alignments=277 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 34 :MSILEGSLG 1a3yA 111 :KTIMTGLLG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHE 1a3yA 120 :KGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1011 Number of alignments=278 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 36 :ILEGSLG 1a3yA 113 :IMTGLLG T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1a3yA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=1013 Number of alignments=279 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 44 :IPRRVL 1a3yA 114 :MTGLLG T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1a3yA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=1015 Number of alignments=280 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MRELLR 1a3yA 9 :PFELSG T0349 14 :SAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1a3yA 15 :KWITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGN Number of specific fragments extracted= 2 number of extra gaps= 0 total=1017 Number of alignments=281 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MREL 1a3yA 9 :PFEL T0349 5 :LRTNDAVLLS 1a3yA 21 :IGSSDLEKIG T0349 15 :AVG 1a3yA 55 :FFS T0349 21 :DGADI 1a3yA 58 :KENGI T0349 26 :GHLVLDQNM 1a3yA 74 :EGNTYDVNY T0349 38 :EG 1a3yA 108 :EG T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSD 1a3yA 116 :GLLGKGTDIEDQDLEKFKEVTRENGIPEENIVN Number of specific fragments extracted= 7 number of extra gaps= 0 total=1024 Number of alignments=282 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MREL 1a3yA 9 :PFEL T0349 5 :LRTNDA 1a3yA 21 :IGSSDL T0349 17 :GALLDGADIGHL 1a3yA 27 :EKIGENAPFQVF T0349 29 :VLDQNMS 1a3yA 43 :EFDDKES T0349 38 :EGSLGVIPR 1a3yA 108 :EGDKTIMTG T0349 48 :VL 1a3yA 117 :LL T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1a3yA 124 :IEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1a3yA 154 :DCPA Number of specific fragments extracted= 8 number of extra gaps= 0 total=1032 Number of alignments=283 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MREL 1a3yA 9 :PFEL T0349 5 :LRTNDA 1a3yA 21 :IGSSDL T0349 18 :ALLDGAD 1a3yA 27 :EKIGENA T0349 25 :IGHLVLDQNMS 1a3yA 39 :MRSIEFDDKES T0349 36 :ILEGSLGVIPR 1a3yA 58 :KENGICEEFSL T0349 48 :VL 1a3yA 98 :LI T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1a3yA 124 :IEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1a3yA 154 :DCPA Number of specific fragments extracted= 8 number of extra gaps= 0 total=1040 Number of alignments=284 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHE 1a3yA 116 :GLLGKGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1041 Number of alignments=285 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 34 :MSILEGSLG 1a3yA 111 :KTIMTGLLG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHE 1a3yA 120 :KGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1043 Number of alignments=286 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 34 :MSILEGSLGVI 1a3yA 111 :KTIMTGLLGKG T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1a3yA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=1045 Number of alignments=287 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 35 :SILEGSLGV 1a3yA 112 :TIMTGLLGK T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1a3yA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=1047 Number of alignments=288 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MREL 1a3yA 9 :PFEL T0349 12 :LLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1a3yA 13 :SGKWITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGN Number of specific fragments extracted= 2 number of extra gaps= 0 total=1049 Number of alignments=289 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MREL 1a3yA 9 :PFEL T0349 8 :NDAVLLSAVG 1a3yA 48 :ESKVYLNFFS T0349 21 :DGADI 1a3yA 58 :KENGI T0349 26 :GHLVLDQNMS 1a3yA 74 :EGNTYDVNYA T0349 38 :EG 1a3yA 108 :EG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDAGLAHELR 1a3yA 114 :MTGLLGKGTDIEDQDLEKFKEVTRENGIPEENI Number of specific fragments extracted= 6 number of extra gaps= 0 total=1055 Number of alignments=290 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MREL 1a3yA 9 :PFEL T0349 5 :LRTND 1a3yA 21 :IGSSD T0349 22 :GADIGHLVLDQ 1a3yA 30 :GENAPFQVFMR T0349 35 :SILEGSLG 1a3yA 112 :TIMTGLLG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1a3yA 120 :KGTDIEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1a3yA 154 :DCPA Number of specific fragments extracted= 6 number of extra gaps= 0 total=1061 Number of alignments=291 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 1 :MREL 1a3yA 9 :PFEL T0349 5 :LRTNDA 1a3yA 21 :IGSSDL T0349 21 :DGAD 1a3yA 46 :DKES T0349 35 :SI 1a3yA 71 :TK T0349 37 :LEGSLGVIPRR 1a3yA 82 :YAGNNKFVVSY T0349 48 :VL 1a3yA 98 :LI T0349 50 :VHEDDLAGARRLLTDAGLAHE 1a3yA 124 :IEDQDLEKFKEVTRENGIPEE T0349 71 :LRSDD 1a3yA 153 :DDCPA Number of specific fragments extracted= 8 number of extra gaps= 0 total=1069 Number of alignments=292 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 50 :VHEDDLAGARRLLTDAGLAHE 1a3yA 124 :IEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1070 Number of alignments=293 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 36 :ILEGSLG 1a3yA 113 :IMTGLLG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHE 1a3yA 120 :KGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1072 Number of alignments=294 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 38 :EGSLG 1a3yA 115 :TGLLG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHE 1a3yA 120 :KGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1074 Number of alignments=295 # 1a3yA read from 1a3yA/merged-a2m # found chain 1a3yA in template set T0349 50 :VHEDDLAGARRLLTDAGLAHE 1a3yA 124 :IEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1075 Number of alignments=296 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qd9A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1qd9A expands to /projects/compbio/data/pdb/1qd9.pdb.gz 1qd9A:Skipped atom 598, because occupancy 0.230 <= existing 0.770 in 1qd9A Skipped atom 600, because occupancy 0.230 <= existing 0.770 in 1qd9A Skipped atom 602, because occupancy 0.230 <= existing 0.770 in 1qd9A # T0349 read from 1qd9A/merged-a2m # 1qd9A read from 1qd9A/merged-a2m # adding 1qd9A to template set # found chain 1qd9A in template set Warning: unaligning (T0349)E70 because last residue in template chain is (1qd9A)K125 T0349 1 :MRELLRTNDAVLLSAVGAL 1qd9A 17 :YSQGIIVNNMFYSSGQIPL T0349 20 :LDGADIGHLVLDQNMSILEGSLGV 1qd9A 37 :PSGEMVNGDIKEQTHQVFSNLKAV T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAH 1qd9A 99 :KPARSCVEVARLPKDALVEIEVIALV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1078 Number of alignments=297 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set Warning: unaligning (T0349)E70 because last residue in template chain is (1qd9A)K125 T0349 2 :RELLRTNDAVLLSAVGAL 1qd9A 18 :SQGIIVNNMFYSSGQIPL T0349 20 :LDGADIGHLVLDQNMSILEG 1qd9A 37 :PSGEMVNGDIKEQTHQVFSN T0349 40 :SLG 1qd9A 63 :EAG T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAH 1qd9A 98 :HKPARSCVEVARLPKDALVEIEVIALV Number of specific fragments extracted= 4 number of extra gaps= 0 total=1082 Number of alignments=298 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 17 :GALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLL 1qd9A 9 :HAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1083 Number of alignments=299 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 19 :LLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLT 1qd9A 11 :PAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFS Number of specific fragments extracted= 1 number of extra gaps= 0 total=1084 Number of alignments=300 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1qd9A)T2 T0349 3 :ELLRTN 1qd9A 3 :KAVHTK T0349 17 :GALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1qd9A 9 :HAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGAS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1086 Number of alignments=301 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set Warning: unaligning (T0349)R2 because first residue in template chain is (1qd9A)T2 T0349 3 :ELLRTN 1qd9A 3 :KAVHTK T0349 17 :GALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRL 1qd9A 9 :HAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQV T0349 62 :LTDAGLAHE 1qd9A 61 :LEEAGASFE T0349 71 :LR 1qd9A 110 :LP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1090 Number of alignments=302 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 17 :GALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLL 1qd9A 9 :HAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1091 Number of alignments=303 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLT 1qd9A 10 :APAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFS Number of specific fragments extracted= 1 number of extra gaps= 0 total=1092 Number of alignments=304 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1qd9A 17 :YSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1093 Number of alignments=305 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MRELLRTNDAVLLSAVGALLD 1qd9A 17 :YSQGIIVNNMFYSSGQIPLTP T0349 22 :GADIGHLVLDQNMSILE 1qd9A 39 :GEMVNGDIKEQTHQVFS T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDAGLAHE 1qd9A 56 :NLKAVLEEAGASFETVVKATVFIADMEQFAE T0349 71 :LRSD 1qd9A 110 :LPKD Number of specific fragments extracted= 4 number of extra gaps= 0 total=1097 Number of alignments=306 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 17 :GALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLL 1qd9A 9 :HAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1098 Number of alignments=307 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 17 :GALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLL 1qd9A 9 :HAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1099 Number of alignments=308 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MRELLRTNDA 1qd9A 2 :TKAVHTKHAP T0349 14 :SAVGALLDGADIGHLVLDQNMSILEGS 1qd9A 12 :AAIGPYSQGIIVNNMFYSSGQIPLTPS T0349 42 :GVIP 1qd9A 39 :GEMV T0349 46 :RRVLVH 1qd9A 44 :GDIKEQ T0349 52 :EDD 1qd9A 51 :HQV T0349 55 :LAGARRLLTDAGLAHELR 1qd9A 98 :HKPARSCVEVARLPKDAL T0349 73 :SDD 1qd9A 123 :LVK Number of specific fragments extracted= 7 number of extra gaps= 0 total=1106 Number of alignments=309 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 27 :HLVLDQNMSILEGSLGVIPR 1qd9A 19 :QGIIVNNMFYSSGQIPLTPS T0349 48 :VLVH 1qd9A 39 :GEMV T0349 52 :EDDLAGA 1qd9A 44 :GDIKEQT Number of specific fragments extracted= 3 number of extra gaps= 0 total=1109 Number of alignments=310 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 29 :VLDQNMSILEGSLGVIPRRVLVHED 1qd9A 21 :IIVNNMFYSSGQIPLTPSGEMVNGD Number of specific fragments extracted= 1 number of extra gaps= 0 total=1110 Number of alignments=311 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 33 :NMSILEGSLGVIPRRVLVHED 1qd9A 25 :NMFYSSGQIPLTPSGEMVNGD Number of specific fragments extracted= 1 number of extra gaps= 0 total=1111 Number of alignments=312 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MRELLRTNDAVLLS 1qd9A 2 :TKAVHTKHAPAAIG T0349 24 :DIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1qd9A 16 :PYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGAS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1113 Number of alignments=313 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MRELLRTNDAVLLSAVGA 1qd9A 2 :TKAVHTKHAPAAIGPYSQ T0349 28 :LVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1qd9A 20 :GIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGAS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1115 Number of alignments=314 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :M 1qd9A 2 :T T0349 5 :LRTNDAVLLSAVGALLDGADIGHL 1qd9A 46 :IKEQTHQVFSNLKAVLEEAGASFE T0349 42 :GVIPRRVLV 1qd9A 70 :TVVKATVFI T0349 51 :HEDDLAGARRLLTDAGLAHE 1qd9A 80 :DMEQFAEVNEVYGQYFDTHK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1119 Number of alignments=315 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :M 1qd9A 2 :T T0349 5 :LRTNDAVLLSAVGALLDGADIGH 1qd9A 46 :IKEQTHQVFSNLKAVLEEAGASF T0349 42 :GVIPRRVLV 1qd9A 70 :TVVKATVFI T0349 51 :HEDDLAGARRLLTDA 1qd9A 80 :DMEQFAEVNEVYGQY T0349 66 :GLAHEL 1qd9A 109 :RLPKDA Number of specific fragments extracted= 5 number of extra gaps= 0 total=1124 Number of alignments=316 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 33 :NMSILEGSLGVIPRRVLVHEDDLAGARRLL 1qd9A 25 :NMFYSSGQIPLTPSGEMVNGDIKEQTHQVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1125 Number of alignments=317 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 32 :QNMSILEGSLGVIPRRVLVHEDDLAGARRLLT 1qd9A 24 :NNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFS Number of specific fragments extracted= 1 number of extra gaps= 0 total=1126 Number of alignments=318 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 6 :RTNDAVLLSAVGALLDGADIGHL 1qd9A 47 :KEQTHQVFSNLKAVLEEAGASFE T0349 42 :GVIPRRVLV 1qd9A 70 :TVVKATVFI T0349 51 :HEDDLAGARRLLTDA 1qd9A 80 :DMEQFAEVNEVYGQY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1129 Number of alignments=319 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 6 :RTNDAVLLSAVGALLDGADIGH 1qd9A 47 :KEQTHQVFSNLKAVLEEAGASF T0349 42 :GVIPRRVLV 1qd9A 70 :TVVKATVFI T0349 51 :HEDDLAGARRLLTDA 1qd9A 80 :DMEQFAEVNEVYGQY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1132 Number of alignments=320 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MRELLRTNDAVLLS 1qd9A 2 :TKAVHTKHAPAAIG T0349 24 :DIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1qd9A 16 :PYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGAS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1134 Number of alignments=321 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MRELLRTNDAVLLSAVGA 1qd9A 2 :TKAVHTKHAPAAIGPYSQ T0349 28 :LVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1qd9A 20 :GIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGAS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1136 Number of alignments=322 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MREL 1qd9A 2 :TKAV T0349 5 :LRTNDAVLLSAVGALLDGADIGHL 1qd9A 46 :IKEQTHQVFSNLKAVLEEAGASFE T0349 35 :SILEG 1qd9A 70 :TVVKA T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1qd9A 75 :TVFIADMEQFAEVNEVYGQYFDTHKP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1140 Number of alignments=323 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MREL 1qd9A 2 :TKAV T0349 5 :LRTNDAVLLSAVGALLDGADIGHL 1qd9A 46 :IKEQTHQVFSNLKAVLEEAGASFE T0349 35 :SILEG 1qd9A 70 :TVVKA T0349 46 :RRVLVHEDDLAGARRLLTDA 1qd9A 75 :TVFIADMEQFAEVNEVYGQY T0349 66 :GLAHEL 1qd9A 109 :RLPKDA Number of specific fragments extracted= 5 number of extra gaps= 0 total=1145 Number of alignments=324 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 33 :NMSILEGSLGVIPRRVLVHEDDLAGARRLL 1qd9A 25 :NMFYSSGQIPLTPSGEMVNGDIKEQTHQVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1146 Number of alignments=325 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 32 :QNMSILEGSLGVIPRRVLVHEDDLAGARRLLT 1qd9A 24 :NNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFS Number of specific fragments extracted= 1 number of extra gaps= 0 total=1147 Number of alignments=326 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 9 :DAVLLSAVGALLDGADIGHL 1qd9A 50 :THQVFSNLKAVLEEAGASFE T0349 35 :SILEG 1qd9A 70 :TVVKA T0349 46 :RRVLVHEDDLAGARRLLTDAGLA 1qd9A 75 :TVFIADMEQFAEVNEVYGQYFDT Number of specific fragments extracted= 3 number of extra gaps= 0 total=1150 Number of alignments=327 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 9 :DAVLLSAVGALLDGADIGHL 1qd9A 50 :THQVFSNLKAVLEEAGASFE T0349 35 :SILEG 1qd9A 70 :TVVKA T0349 46 :RRVLVHEDDLAGARRLLTDA 1qd9A 75 :TVFIADMEQFAEVNEVYGQY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1153 Number of alignments=328 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MRELLRTNDAVLLSAVGALL 1qd9A 2 :TKAVHTKHAPAAIGPYSQGI T0349 30 :LDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1qd9A 22 :IVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGAS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1155 Number of alignments=329 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MRELLRTNDAVLLSAVGA 1qd9A 2 :TKAVHTKHAPAAIGPYSQ T0349 28 :LVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTD 1qd9A 20 :GIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSN T0349 67 :LAHELRSDD 1qd9A 57 :LKAVLEEAG Number of specific fragments extracted= 3 number of extra gaps= 0 total=1158 Number of alignments=330 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MREL 1qd9A 2 :TKAV T0349 10 :AVLLSAVGALLDGADIG 1qd9A 51 :HQVFSNLKAVLEEAGAS T0349 37 :LE 1qd9A 68 :FE T0349 42 :GVIPRR 1qd9A 70 :TVVKAT T0349 48 :VLVHEDDLAGARRLLTDAGLAHE 1qd9A 77 :FIADMEQFAEVNEVYGQYFDTHK Number of specific fragments extracted= 5 number of extra gaps= 0 total=1163 Number of alignments=331 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 1 :MREL 1qd9A 2 :TKAV T0349 10 :AVLLSAVGALLDGADIG 1qd9A 51 :HQVFSNLKAVLEEAGAS T0349 37 :LEGSLGV 1qd9A 68 :FETVVKA T0349 46 :RRVLVHEDDLAGARRLLTDA 1qd9A 75 :TVFIADMEQFAEVNEVYGQY Number of specific fragments extracted= 4 number of extra gaps= 0 total=1167 Number of alignments=332 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 33 :NMSILEGSLGVIPRRVLVHEDDLAGARRLL 1qd9A 25 :NMFYSSGQIPLTPSGEMVNGDIKEQTHQVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1168 Number of alignments=333 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 33 :NMSILEGSLGVIPRRVLVHEDDLAGARRLL 1qd9A 25 :NMFYSSGQIPLTPSGEMVNGDIKEQTHQVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1169 Number of alignments=334 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 12 :LLSAVGALLDGADIG 1qd9A 53 :VFSNLKAVLEEAGAS T0349 37 :LE 1qd9A 68 :FE T0349 42 :GVIPRR 1qd9A 70 :TVVKAT T0349 48 :VLVHEDDLAGARRLLTDA 1qd9A 77 :FIADMEQFAEVNEVYGQY Number of specific fragments extracted= 4 number of extra gaps= 0 total=1173 Number of alignments=335 # 1qd9A read from 1qd9A/merged-a2m # found chain 1qd9A in template set T0349 11 :VLLSAVGALLDGADIG 1qd9A 52 :QVFSNLKAVLEEAGAS T0349 37 :LEGSLGV 1qd9A 68 :FETVVKA T0349 46 :RRVLVHEDDLAGARRLLTDA 1qd9A 75 :TVFIADMEQFAEVNEVYGQY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1176 Number of alignments=336 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1oo0A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1oo0A expands to /projects/compbio/data/pdb/1oo0.pdb.gz 1oo0A:# T0349 read from 1oo0A/merged-a2m # 1oo0A read from 1oo0A/merged-a2m # adding 1oo0A to template set # found chain 1oo0A in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1oo0A 4 :EDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPW Number of specific fragments extracted= 1 number of extra gaps= 0 total=1177 Number of alignments=337 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 1 :MRELLRTNDAVLLSAVGAL 1oo0A 4 :EDFYLRYYVGHKGKFGHEF T0349 20 :LDGADIGHLVLDQNMSILEGS 1oo0A 25 :FEFRPDGKLRYANNSNYKNDT T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHEL 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQED T0349 72 :RSD 1oo0A 113 :RSK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1181 Number of alignments=338 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHE 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1182 Number of alignments=339 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLA 1oo0A 45 :TMIRKEAFVHQSVMEELKRIIIDSEIM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1183 Number of alignments=340 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQN 1oo0A 42 :KNDTMIRKEAFVHQSVMEELKRIIIDSEIMQED T0349 34 :MSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1oo0A 106 :GSLVDVNRSKDPEGLRCFYYLVQDLKCLVFSLIGLHFKIKPI Number of specific fragments extracted= 2 number of extra gaps= 0 total=1185 Number of alignments=341 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 1 :MRELLRTNDAVLLSAVGAL 1oo0A 4 :EDFYLRYYVGHKGKFGHEF T0349 20 :LDGADIGHLVLDQNMSILEGSLGVIPR 1oo0A 48 :RKEAFVHQSVMEELKRIIIDSEIMQED T0349 47 :RVLVHEDDLAGAR 1oo0A 109 :VDVNRSKDPEGLR T0349 60 :RLLTDAGLAHELRSDD 1oo0A 132 :CLVFSLIGLHFKIKPI Number of specific fragments extracted= 4 number of extra gaps= 0 total=1189 Number of alignments=342 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHE 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1190 Number of alignments=343 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTD 1oo0A 46 :MIRKEAFVHQSVMEELKRIIID Number of specific fragments extracted= 1 number of extra gaps= 0 total=1191 Number of alignments=344 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1oo0A 4 :EDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPW Number of specific fragments extracted= 1 number of extra gaps= 0 total=1192 Number of alignments=345 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 1 :MRELLRTNDAVLLSAVGA 1oo0A 4 :EDFYLRYYVGHKGKFGHE T0349 19 :LLDGADIGHLVLDQNMSILEG 1oo0A 24 :EFEFRPDGKLRYANNSNYKND T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHE 1oo0A 45 :TMIRKEAFVHQSVMEELKRIIIDSEIMQE T0349 71 :LRSD 1oo0A 112 :NRSK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1196 Number of alignments=346 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHE 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1197 Number of alignments=347 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAH 1oo0A 45 :TMIRKEAFVHQSVMEELKRIIIDSEIMQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=1198 Number of alignments=348 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHE 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1199 Number of alignments=349 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLA 1oo0A 47 :IRKEAFVHQSVMEELKRIIIDSEIM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1200 Number of alignments=350 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set Warning: unaligning (T0349)D9 because first residue in template chain is (1oo0A)E4 T0349 10 :AVLLSAVGALLDGADIGHLVLDQNM 1oo0A 5 :DFYLRYYVGHKGKFGHEFLEFEFRP T0349 38 :EGSLG 1oo0A 30 :DGKLR T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPW Number of specific fragments extracted= 3 number of extra gaps= 0 total=1203 Number of alignments=351 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set Warning: unaligning (T0349)N8 because first residue in template chain is (1oo0A)E4 T0349 9 :DAVLLSAVG 1oo0A 5 :DFYLRYYVG T0349 19 :LLDGADIGHLVLDQNM 1oo0A 14 :HKGKFGHEFLEFEFRP T0349 38 :EGSL 1oo0A 30 :DGKL T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1oo0A 45 :TMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPW Number of specific fragments extracted= 4 number of extra gaps= 0 total=1207 Number of alignments=352 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 22 :GADIGH 1oo0A 17 :KFGHEF T0349 28 :LVLDQ 1oo0A 25 :FEFRP T0349 38 :EGSLG 1oo0A 30 :DGKLR T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPW Number of specific fragments extracted= 4 number of extra gaps= 0 total=1211 Number of alignments=353 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 28 :LVLDQNMSI 1oo0A 25 :FEFRPDGKL T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHELRSD 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQEDDLP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1213 Number of alignments=354 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGL 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1214 Number of alignments=355 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 50 :VHEDDLAGARRLLTDAGLAH 1oo0A 53 :VHQSVMEELKRIIIDSEIMQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=1215 Number of alignments=356 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSD 1oo0A 47 :IRKEAFVHQSVMEELKRIIIDSEIMQEDDLP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1216 Number of alignments=357 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHE 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1217 Number of alignments=358 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set Warning: unaligning (T0349)D9 because first residue in template chain is (1oo0A)E4 T0349 10 :AVLLSAVGALLDGADIGHLVLDQNM 1oo0A 5 :DFYLRYYVGHKGKFGHEFLEFEFRP T0349 38 :EGSLG 1oo0A 30 :DGKLR T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPW Number of specific fragments extracted= 3 number of extra gaps= 0 total=1220 Number of alignments=359 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set Warning: unaligning (T0349)N8 because first residue in template chain is (1oo0A)E4 T0349 9 :DAVLLSAVG 1oo0A 5 :DFYLRYYVG T0349 19 :LLDGADIGHLVLDQNM 1oo0A 14 :HKGKFGHEFLEFEFRP T0349 38 :EGSL 1oo0A 30 :DGKL T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1oo0A 45 :TMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPW Number of specific fragments extracted= 4 number of extra gaps= 0 total=1224 Number of alignments=360 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set Warning: unaligning (T0349)N8 because first residue in template chain is (1oo0A)E4 T0349 9 :DAVL 1oo0A 5 :DFYL T0349 22 :GADIGHLVLD 1oo0A 17 :KFGHEFLEFE T0349 32 :Q 1oo0A 29 :P T0349 38 :EGSLG 1oo0A 30 :DGKLR T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPW Number of specific fragments extracted= 5 number of extra gaps= 0 total=1229 Number of alignments=361 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 22 :GA 1oo0A 17 :KF T0349 27 :HLVLDQNMS 1oo0A 24 :EFEFRPDGK T0349 41 :LG 1oo0A 33 :LR T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHELRS 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQEDDL Number of specific fragments extracted= 4 number of extra gaps= 0 total=1233 Number of alignments=362 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGL 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1234 Number of alignments=363 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 50 :VHEDDLAGARRLLTDAGLAH 1oo0A 53 :VHQSVMEELKRIIIDSEIMQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=1235 Number of alignments=364 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHELRS 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQEDDL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1236 Number of alignments=365 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHE 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1237 Number of alignments=366 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1oo0A 7 :YLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPW Number of specific fragments extracted= 1 number of extra gaps= 0 total=1238 Number of alignments=367 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set Warning: unaligning (T0349)N8 because first residue in template chain is (1oo0A)E4 T0349 9 :DAVLLSAVG 1oo0A 5 :DFYLRYYVG T0349 18 :ALLDGADIGH 1oo0A 16 :GKFGHEFLEF T0349 28 :LVLDQNMSILEGSL 1oo0A 27 :FRPDGKLRYANNSN T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRS 1oo0A 45 :TMIRKEAFVHQSVMEELKRIIIDSEIMQEDDL Number of specific fragments extracted= 4 number of extra gaps= 0 total=1242 Number of alignments=368 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 2 :RELLR 1oo0A 20 :HEFLE T0349 36 :ILEGSL 1oo0A 28 :RPDGKL T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSD 1oo0A 45 :TMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1245 Number of alignments=369 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 2 :REL 1oo0A 20 :HEF T0349 5 :LRTNDAVLL 1oo0A 27 :FRPDGKLRY T0349 33 :NMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGL 1oo0A 36 :ANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEI T0349 68 :AHELRSDD 1oo0A 75 :DLPWPPPD Number of specific fragments extracted= 4 number of extra gaps= 0 total=1249 Number of alignments=370 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGL 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1250 Number of alignments=371 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 56 :AGARRLLTDAGLA 1oo0A 59 :EELKRIIIDSEIM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1251 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELR 1oo0A 45 :TMIRKEAFVHQSVMEELKRIIIDSEIMQEDD Number of specific fragments extracted= 1 number of extra gaps= 0 total=1252 Number of alignments=372 # 1oo0A read from 1oo0A/merged-a2m # found chain 1oo0A in template set T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHE 1oo0A 46 :MIRKEAFVHQSVMEELKRIIIDSEIMQE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1253 Number of alignments=373 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwmA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1kwmA/merged-a2m # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set Warning: unaligning (T0349)L19 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1kwmA)D104 Warning: unaligning (T0349)L20 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1kwmA)D104 Warning: unaligning (T0349)E52 because of BadResidue code BAD_PEPTIDE in next template residue (1kwmA)Y198 T0349 1 :MRELLRT 1kwmA 83 :VREAVRT T0349 8 :NDAVLLSAVGA 1kwmA 92 :REIQVTELLNK T0349 21 :DGADIG 1kwmA 114 :DGYIYT T0349 27 :HLVLDQN 1kwmA 131 :STHTGSS T0349 34 :MSILEGSLGVIPRRVLVH 1kwmA 180 :ADFIRNKLSSIKAYLTIH T0349 53 :DDLAGARRLLTDAGLAHELRSDD 1kwmA 214 :ENNAELNALAKATVKELASLHGT Number of specific fragments extracted= 6 number of extra gaps= 2 total=1259 Number of alignments=374 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set Warning: unaligning (T0349)A23 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1kwmA)D104 Warning: unaligning (T0349)D24 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1kwmA)D104 T0349 1 :MRELL 1kwmA 18 :IEAWT T0349 6 :RTN 1kwmA 27 :TEN T0349 9 :DAVLLS 1kwmA 31 :ALISRS T0349 15 :AVGALLDG 1kwmA 95 :QVTELLNK T0349 25 :I 1kwmA 105 :F T0349 26 :GH 1kwmA 119 :TW T0349 28 :LVLDQNMS 1kwmA 132 :THTGSSCI T0349 36 :ILEGSLGVIPRRVL 1kwmA 165 :YCGPAAESEKETKA T0349 50 :VHEDDLAGARRLLTDAGLAHELRSDD 1kwmA 211 :KLGENNAELNALAKATVKELASLHGT Number of specific fragments extracted= 9 number of extra gaps= 1 total=1268 Number of alignments=375 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 16 :VGALLDGADIGHLVLDQNMSILEGSLGVIPRR 1kwmA 23A:INIIRELASTTQIDFWKPDSVTQIKPHSTVDF T0349 49 :LVHEDDLAGARRLLTDAGLAHELRSDD 1kwmA 55A:RVKAEDTVTVENVLKQNELQYKVLISN Number of specific fragments extracted= 2 number of extra gaps= 0 total=1270 Number of alignments=376 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1270 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set Warning: unaligning (T0349)A23 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1kwmA)D104 Warning: unaligning (T0349)D24 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1kwmA)D104 Warning: unaligning (T0349)A56 because of BadResidue code BAD_PEPTIDE in next template residue (1kwmA)Y198 Warning: unaligning (T0349)G57 because of BadResidue code BAD_PEPTIDE at template residue (1kwmA)Y198 Warning: unaligning (T0349)A58 because of BadResidue code BAD_PEPTIDE at template residue (1kwmA)S199 Warning: unaligning (T0349)D64 because of BadResidue code BAD_PEPTIDE in next template residue (1kwmA)Y206 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE at template residue (1kwmA)Y206 T0349 1 :MRELLRT 1kwmA 83 :VREAVRT T0349 8 :NDAVLL 1kwmA 92 :REIQVT T0349 18 :ALLDG 1kwmA 98 :ELLNK T0349 25 :I 1kwmA 105 :F T0349 26 :GHLVLDQNMSILEGSLGVIPR 1kwmA 115 :GYIYTWTKSRFWRKTRSTHTG T0349 47 :RVLVHEDDL 1kwmA 188 :SIKAYLTIH T0349 59 :RRLLT 1kwmA 200 :QMMIY T0349 66 :GLAHELRSDD 1kwmA 207 :SYAYKLGENN Number of specific fragments extracted= 8 number of extra gaps= 3 total=1278 Number of alignments=377 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set Warning: unaligning (T0349)A23 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1kwmA)D104 Warning: unaligning (T0349)D24 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1kwmA)D104 Warning: unaligning (T0349)E52 because of BadResidue code BAD_PEPTIDE in next template residue (1kwmA)Y198 Warning: unaligning (T0349)D53 because of BadResidue code BAD_PEPTIDE at template residue (1kwmA)Y198 Warning: unaligning (T0349)R72 because of BadResidue code BAD_PEPTIDE in next template residue (1kwmA)D273 Warning: unaligning (T0349)S73 because of BadResidue code BAD_PEPTIDE at template residue (1kwmA)D273 T0349 1 :MRELLRTN 1kwmA 22 :TQQVATEN T0349 9 :DAVLLSA 1kwmA 60 :PAIFMDC T0349 16 :VGALLDG 1kwmA 96 :VTELLNK T0349 25 :I 1kwmA 105 :F T0349 26 :G 1kwmA 119 :T T0349 27 :HLVLD 1kwmA 133 :HTGSS T0349 32 :QNMSI 1kwmA 145 :RNFDA T0349 37 :LEGSLGVIPR 1kwmA 166 :CGPAAESEKE T0349 47 :RVLV 1kwmA 188 :SIKA T0349 51 :H 1kwmA 196 :H T0349 54 :DLAGARRLLTDA 1kwmA 215 :NNAELNALAKAT T0349 66 :GLAHEL 1kwmA 266 :SFTFEL T0349 74 :DD 1kwmA 274 :TG Number of specific fragments extracted= 13 number of extra gaps= 3 total=1291 Number of alignments=378 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1kwmA 50A:STVDFRVKAEDTVTVENVLKQNELQYKVLISN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1292 Number of alignments=379 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1292 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set Warning: unaligning (T0349)R72 because of BadResidue code BAD_PEPTIDE in next template residue (1kwmA)D273 Warning: unaligning (T0349)S73 because of BadResidue code BAD_PEPTIDE at template residue (1kwmA)D273 T0349 1 :MRELLRTND 1kwmA 22 :TQQVATENP T0349 10 :AVLLSAVGALLDGADIGHLVLDQN 1kwmA 32 :LISRSVIGTTFEGRAIYLLKVGKA T0349 34 :MSILEGSLGVIPRR 1kwmA 76 :PAFCQWFVREAVRT T0349 48 :VLVHEDDLAGARRLLTDA 1kwmA 169 :AAESEKETKALADFIRNK T0349 66 :GLAHEL 1kwmA 266 :SFTFEL T0349 74 :DD 1kwmA 274 :TG Number of specific fragments extracted= 6 number of extra gaps= 1 total=1298 Number of alignments=380 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set Warning: unaligning (T0349)R72 because of BadResidue code BAD_PEPTIDE in next template residue (1kwmA)D273 Warning: unaligning (T0349)S73 because of BadResidue code BAD_PEPTIDE at template residue (1kwmA)D273 T0349 1 :MRELLRTND 1kwmA 22 :TQQVATENP T0349 10 :AVLLSAVGALLDGADIGHLVLDQN 1kwmA 32 :LISRSVIGTTFEGRAIYLLKVGKA T0349 40 :S 1kwmA 58 :N T0349 41 :LGVIPRRVLVH 1kwmA 79 :CQWFVREAVRT T0349 52 :EDD 1kwmA 92 :REI T0349 55 :LAGARRLLTD 1kwmA 176 :TKALADFIRN T0349 65 :AGLAHEL 1kwmA 265 :YSFTFEL T0349 74 :DD 1kwmA 274 :TG Number of specific fragments extracted= 8 number of extra gaps= 1 total=1306 Number of alignments=381 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1kwmA 50A:STVDFRVKAEDTVTVENVLKQNELQYKVLISN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1307 Number of alignments=382 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRS 1kwmA 50A:STVDFRVKAEDTVTVENVLKQNELQYKVLI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1308 Number of alignments=383 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 14 :SAVGALLDGADI 1kwmA 36 :SVIGTTFEGRAI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1309 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1309 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :MRE 1kwmA 1A:HHG T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGS 1kwmA 14A:RVNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1kwmA 51A:TVDFRVKAEDTVTVENVLKQNELQYKVLISN Number of specific fragments extracted= 3 number of extra gaps= 0 total=1312 Number of alignments=384 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :M 1kwmA 1A:H T0349 4 :L 1kwmA 12A:V T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGS 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1kwmA 51A:TVDFRVKAEDTVTVENVLKQNELQYKVLISN Number of specific fragments extracted= 4 number of extra gaps= 0 total=1316 Number of alignments=385 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :M 1kwmA 1A:H T0349 8 :NDAVLLSAVGALLDGADIGHLVLDQNMSILE 1kwmA 18A:EDENHINIIRELASTTQIDFWKPDSVTQIKP T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHEL 1kwmA 49A:HSTVDFRVKAEDTVTVENVLKQNELQYKV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1319 Number of alignments=386 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :M 1kwmA 1A:H T0349 8 :NDAVLLSAVGALLDGADIGHLVLDQNMSI 1kwmA 18A:EDENHINIIRELASTTQIDFWKPDSVTQI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLA 1kwmA 47A:KPHSTVDFRVKAEDTVTVENVLKQNELQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=1322 Number of alignments=387 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 50 :VHEDDLAGARRLLTDAGLAHE 1kwmA 56A:VKAEDTVTVENVLKQNELQYK Number of specific fragments extracted= 1 number of extra gaps= 0 total=1323 Number of alignments=388 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 11 :VLLSAVGALLDGADIGHLVLDQNMSILEGS 1kwmA 21A:NHINIIRELASTTQIDFWKPDSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1kwmA 51A:TVDFRVKAEDTVTVENVLKQNELQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1325 Number of alignments=389 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSILE 1kwmA 19A:DENHINIIRELASTTQIDFWKPDSVTQIKP T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAH 1kwmA 49A:HSTVDFRVKAEDTVTVENVLKQNELQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1327 Number of alignments=390 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSI 1kwmA 19A:DENHINIIRELASTTQIDFWKPDSVTQI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLA 1kwmA 47A:KPHSTVDFRVKAEDTVTVENVLKQNELQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=1329 Number of alignments=391 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :MRE 1kwmA 1A:HHG T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGS 1kwmA 14A:RVNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1kwmA 51A:TVDFRVKAEDTVTVENVLKQNELQYKVLISN Number of specific fragments extracted= 3 number of extra gaps= 0 total=1332 Number of alignments=392 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :M 1kwmA 1A:H T0349 4 :L 1kwmA 12A:V T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGS 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1kwmA 51A:TVDFRVKAEDTVTVENVLKQNELQYKVLISN Number of specific fragments extracted= 4 number of extra gaps= 0 total=1336 Number of alignments=393 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :M 1kwmA 1A:H T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVLDQNMSILE 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWKPDSVTQIKP T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHEL 1kwmA 49A:HSTVDFRVKAEDTVTVENVLKQNELQYKV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1339 Number of alignments=394 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :M 1kwmA 1A:H T0349 2 :REL 1kwmA 10A:EKV T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVLDQNMSI 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWKPDSVTQI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHEL 1kwmA 47A:KPHSTVDFRVKAEDTVTVENVLKQNELQYKV Number of specific fragments extracted= 4 number of extra gaps= 0 total=1343 Number of alignments=395 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 50 :VHEDDLAGARRLLTDAGLAHE 1kwmA 56A:VKAEDTVTVENVLKQNELQYK Number of specific fragments extracted= 1 number of extra gaps= 0 total=1344 Number of alignments=396 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 11 :VLLSAVGALLDGADIGHLVLDQNMSILEGS 1kwmA 21A:NHINIIRELASTTQIDFWKPDSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1kwmA 51A:TVDFRVKAEDTVTVENVLKQNELQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1346 Number of alignments=397 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 7 :TNDAVLLSAVGALLDGADIGHLVLDQNMSILE 1kwmA 17A:VEDENHINIIRELASTTQIDFWKPDSVTQIKP T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAH 1kwmA 49A:HSTVDFRVKAEDTVTVENVLKQNELQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1348 Number of alignments=398 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVLDQNMSI 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWKPDSVTQI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHE 1kwmA 47A:KPHSTVDFRVKAEDTVTVENVLKQNELQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1350 Number of alignments=399 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :MRE 1kwmA 1A:HHG T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIP 1kwmA 14A:RVNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHSTVDFR T0349 50 :VHEDDLAGARRLLTDAGLAHELRSDD 1kwmA 56A:VKAEDTVTVENVLKQNELQYKVLISN Number of specific fragments extracted= 3 number of extra gaps= 0 total=1353 Number of alignments=400 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :MR 1kwmA 1A:HH T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGSL 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHST T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1kwmA 52A:VDFRVKAEDTVTVENVLKQNELQYKVLISN Number of specific fragments extracted= 3 number of extra gaps= 0 total=1356 Number of alignments=401 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :M 1kwmA 1A:H T0349 2 :REL 1kwmA 10A:EKV T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGS 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHEL 1kwmA 51A:TVDFRVKAEDTVTVENVLKQNELQYKV Number of specific fragments extracted= 4 number of extra gaps= 0 total=1360 Number of alignments=402 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 1 :M 1kwmA 1A:H T0349 3 :EL 1kwmA 11A:KV T0349 5 :LRTNDAVLLSAVGALLDGADIGHLV 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWK T0349 34 :MSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLA 1kwmA 40A:PDSVTQIKPHSTVDFRVKAEDTVTVENVLKQNELQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=1364 Number of alignments=403 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1kwmA 56A:VKAEDTVTVENVLKQNELQYKV Number of specific fragments extracted= 1 number of extra gaps= 0 total=1365 Number of alignments=404 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSILEGSL 1kwmA 19A:DENHINIIRELASTTQIDFWKPDSVTQIKPHST T0349 46 :RRVLVHEDDLAGARRLLTDAGLAH 1kwmA 52A:VDFRVKAEDTVTVENVLKQNELQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1367 Number of alignments=405 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 7 :TNDAVLLSAVGALLDGADIGHLVLDQNMSILEGS 1kwmA 17A:VEDENHINIIRELASTTQIDFWKPDSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1kwmA 51A:TVDFRVKAEDTVTVENVLKQNELQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1369 Number of alignments=406 # 1kwmA read from 1kwmA/merged-a2m # found chain 1kwmA in template set T0349 5 :LRTNDAVLLSAVGALLDGADIGHLV 1kwmA 15A:VNVEDENHINIIRELASTTQIDFWK T0349 34 :MSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLA 1kwmA 40A:PDSVTQIKPHSTVDFRVKAEDTVTVENVLKQNELQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=1371 Number of alignments=407 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2cvlA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2cvlA expands to /projects/compbio/data/pdb/2cvl.pdb.gz 2cvlA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0349 read from 2cvlA/merged-a2m # 2cvlA read from 2cvlA/merged-a2m # adding 2cvlA to template set # found chain 2cvlA in template set Warning: unaligning (T0349)R2 because first residue in template chain is (2cvlA)M1 T0349 3 :ELLRTND 2cvlA 2 :EAVKTDR T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRS 2cvlA 9 :APAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVMENLKAVLEAAG T0349 74 :DD 2cvlA 123 :AE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1374 Number of alignments=408 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set Warning: unaligning (T0349)R2 because first residue in template chain is (2cvlA)M1 T0349 3 :ELLRTND 2cvlA 2 :EAVKTDR T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARR 2cvlA 9 :APAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTER T0349 61 :LLTDAGLAH 2cvlA 59 :VLEAAGSGL T0349 73 :SDD 2cvlA 122 :LAE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1378 Number of alignments=409 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 17 :GALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTD 2cvlA 8 :RAPAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVMEN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1379 Number of alignments=410 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 17 :GALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTD 2cvlA 8 :RAPAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVMEN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1380 Number of alignments=411 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set Warning: unaligning (T0349)R2 because first residue in template chain is (2cvlA)M1 T0349 3 :ELLRTNDAVL 2cvlA 2 :EAVKTDRAPA T0349 21 :DGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLA 2cvlA 12 :AIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVMENLKAV T0349 69 :HELR 2cvlA 107 :KALP T0349 74 :DD 2cvlA 123 :AE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1384 Number of alignments=412 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set Warning: unaligning (T0349)R2 because first residue in template chain is (2cvlA)M1 T0349 3 :ELLRTNDAVL 2cvlA 2 :EAVKTDRAPA T0349 21 :DGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRL 2cvlA 12 :AIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERV T0349 62 :LTDA 2cvlA 60 :LEAA T0349 66 :GLAHE 2cvlA 108 :ALPRG T0349 73 :SDD 2cvlA 122 :LAE Number of specific fragments extracted= 5 number of extra gaps= 0 total=1389 Number of alignments=413 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 17 :GALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTD 2cvlA 8 :RAPAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVMEN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1390 Number of alignments=414 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLT 2cvlA 9 :APAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVME Number of specific fragments extracted= 1 number of extra gaps= 0 total=1391 Number of alignments=415 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 2cvlA 16 :YAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVMENLKAVLEAAGSGLSRVVQTTCFLADMEDFPGFNEVY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1392 Number of alignments=416 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGA 2cvlA 16 :YAQAVKAGGFVFVSGQIPLAPDG T0349 24 :DIG 2cvlA 44 :DIR T0349 27 :HLVLDQNMSILE 2cvlA 50 :ERVMENLKAVLE T0349 40 :SLGV 2cvlA 62 :AAGS T0349 51 :HEDDLAGARRLLTDAGLAHELR 2cvlA 66 :GLSRVVQTTCFLADMEDFPGFN T0349 73 :SDD 2cvlA 111 :RGV Number of specific fragments extracted= 6 number of extra gaps= 0 total=1398 Number of alignments=417 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 17 :GALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLL 2cvlA 8 :RAPAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1399 Number of alignments=418 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLT 2cvlA 9 :APAAIGPYAQAVKAGGFVFVSGQIPLAPDGSLVEGDIRVQTERVME Number of specific fragments extracted= 1 number of extra gaps= 0 total=1400 Number of alignments=419 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 26 :GHLVLDQNMSILEGSLGVIPRRVL 2cvlA 30 :GQIPLAPDGSLVEGDIRVQTERVM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1401 Number of alignments=420 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 26 :GHLVLDQNMSILEGSLGVIPRRVL 2cvlA 30 :GQIPLAPDGSLVEGDIRVQTERVM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1402 Number of alignments=421 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 2cvlA 1 :MEAVKTDRAPAAIGPYAQAVKAGGF T0349 26 :GHLVLDQNMSILEGSLGVIPRRVL 2cvlA 30 :GQIPLAPDGSLVEGDIRVQTERVM T0349 56 :AGARRLLTDAGLAHELRSDD 2cvlA 54 :ENLKAVLEAAGSGLSRVVQT Number of specific fragments extracted= 3 number of extra gaps= 0 total=1405 Number of alignments=422 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 2cvlA 1 :MEAVKTDRAPAAIGPYAQAVKAGGF T0349 26 :GHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGAR 2cvlA 30 :GQIPLAPDGSLVEGDIRVQTERVMENLKAVLEAA T0349 66 :GLAHELRS 2cvlA 64 :GSGLSRVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1408 Number of alignments=423 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :M 2cvlA 1 :M T0349 5 :LRTNDAVLLSAVGALLDGADIGH 2cvlA 45 :IRVQTERVMENLKAVLEAAGSGL T0349 41 :LGVIP 2cvlA 68 :SRVVQ T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 2cvlA 74 :TCFLADMEDFPGFNEVYARYFTPPYP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1412 Number of alignments=424 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :M 2cvlA 1 :M T0349 5 :LRTNDAVLLSAVGALLDGADIGH 2cvlA 45 :IRVQTERVMENLKAVLEAAGSGL T0349 42 :GVIP 2cvlA 69 :RVVQ T0349 46 :RRVLVHEDDLAGARRLLTDA 2cvlA 74 :TCFLADMEDFPGFNEVYARY T0349 66 :GLAHEL 2cvlA 108 :ALPRGV Number of specific fragments extracted= 5 number of extra gaps= 0 total=1417 Number of alignments=425 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 26 :GHLVLDQNMSILEGSLGVIPRRVL 2cvlA 30 :GQIPLAPDGSLVEGDIRVQTERVM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1418 Number of alignments=426 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 29 :VLDQNMSILEGSLGVIPRRVLV 2cvlA 33 :PLAPDGSLVEGDIRVQTERVME Number of specific fragments extracted= 1 number of extra gaps= 0 total=1419 Number of alignments=427 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 5 :LRTNDAVLLSAVGALLDGADIGH 2cvlA 45 :IRVQTERVMENLKAVLEAAGSGL T0349 41 :LGVIP 2cvlA 68 :SRVVQ T0349 46 :RRVLVHEDDLAGARRLLTDAGLA 2cvlA 74 :TCFLADMEDFPGFNEVYARYFTP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1422 Number of alignments=428 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 5 :LRTNDAVLLSAVGALLDGADIGH 2cvlA 45 :IRVQTERVMENLKAVLEAAGSGL T0349 42 :GVIP 2cvlA 69 :RVVQ T0349 46 :RRVLVHEDDLAGARRLLTDA 2cvlA 74 :TCFLADMEDFPGFNEVYARY T0349 67 :LAHE 2cvlA 94 :FTPP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1426 Number of alignments=429 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 2cvlA 1 :MEAVKTDRAPAAIGPYAQAVKAGGF T0349 26 :GHLVLDQNMSILEGSLGVIPRRVL 2cvlA 30 :GQIPLAPDGSLVEGDIRVQTERVM T0349 56 :AGARRLLTDAGLAHELRSDD 2cvlA 54 :ENLKAVLEAAGSGLSRVVQT Number of specific fragments extracted= 3 number of extra gaps= 0 total=1429 Number of alignments=430 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 2cvlA 1 :MEAVKTDRAPAAIGPYAQAVKAGGF T0349 26 :GHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGAR 2cvlA 30 :GQIPLAPDGSLVEGDIRVQTERVMENLKAVLEAA T0349 66 :GLAHELRS 2cvlA 64 :GSGLSRVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1432 Number of alignments=431 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MREL 2cvlA 1 :MEAV T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVL 2cvlA 45 :IRVQTERVMENLKAVLEAAGSGLSRV T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHEL 2cvlA 71 :VQTTCFLADMEDFPGFNEVYARYFTPPYP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1435 Number of alignments=432 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MREL 2cvlA 1 :MEAV T0349 5 :LRTNDAVLLSAVGALLDGADIGH 2cvlA 45 :IRVQTERVMENLKAVLEAAGSGL T0349 28 :LVLD 2cvlA 70 :VVQT T0349 46 :RRVLVHEDDLAGARRLLTDA 2cvlA 74 :TCFLADMEDFPGFNEVYARY T0349 66 :GLAHELR 2cvlA 108 :ALPRGVR Number of specific fragments extracted= 5 number of extra gaps= 0 total=1440 Number of alignments=433 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 26 :GHLVLDQNMSILEGSLGVIPRRVL 2cvlA 30 :GQIPLAPDGSLVEGDIRVQTERVM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1441 Number of alignments=434 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 29 :VLDQNMSILEGSLGVIPRRVLV 2cvlA 33 :PLAPDGSLVEGDIRVQTERVME Number of specific fragments extracted= 1 number of extra gaps= 0 total=1442 Number of alignments=435 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 7 :TNDAVLLSAVGALLDGADIGHLVL 2cvlA 47 :VQTERVMENLKAVLEAAGSGLSRV T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAH 2cvlA 71 :VQTTCFLADMEDFPGFNEVYARYFTPP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1444 Number of alignments=436 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 6 :RTNDAVLLSAVGALLDGADIGH 2cvlA 46 :RVQTERVMENLKAVLEAAGSGL T0349 28 :LVLD 2cvlA 70 :VVQT T0349 46 :RRVLVHEDDLAGARRLLTDA 2cvlA 74 :TCFLADMEDFPGFNEVYARY T0349 67 :LAH 2cvlA 94 :FTP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1448 Number of alignments=437 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 2cvlA 1 :MEAVKTDRAPAAIGPYAQAVKAGGF T0349 26 :GHLVLDQNMSILEGSLGVIPRRVL 2cvlA 30 :GQIPLAPDGSLVEGDIRVQTERVM T0349 50 :VHEDDLAGARRLLTDAGLAHELRSDD 2cvlA 59 :VLEAAGSGLSRVVQTTCFLADMEDFP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1451 Number of alignments=438 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 2cvlA 1 :MEAVKTDRAPAAIGPYAQAVKAGGF T0349 26 :GHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGAR 2cvlA 30 :GQIPLAPDGSLVEGDIRVQTERVMENLKAVLEAA T0349 64 :DAGLAHELRS 2cvlA 64 :GSGLSRVVQT Number of specific fragments extracted= 3 number of extra gaps= 0 total=1454 Number of alignments=439 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MREL 2cvlA 1 :MEAV T0349 11 :VLLSAVGALLDGADIG 2cvlA 51 :RVMENLKAVLEAAGSG T0349 37 :LEG 2cvlA 67 :LSR T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELR 2cvlA 70 :VVQTTCFLADMEDFPGFNEVYARYFTPPYPA Number of specific fragments extracted= 4 number of extra gaps= 0 total=1458 Number of alignments=440 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 1 :MREL 2cvlA 1 :MEAV T0349 10 :AVLLSAVGALLDGADIG 2cvlA 50 :ERVMENLKAVLEAAGSG T0349 37 :LEGSLG 2cvlA 67 :LSRVVQ T0349 45 :PRRVLVHEDDLAGARRLLTDA 2cvlA 73 :TTCFLADMEDFPGFNEVYARY T0349 66 :GLAHELR 2cvlA 108 :ALPRGVR T0349 73 :SDD 2cvlA 122 :LAE Number of specific fragments extracted= 6 number of extra gaps= 0 total=1464 Number of alignments=441 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 35 :SILEGSLGVIPRRVL 2cvlA 39 :SLVEGDIRVQTERVM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1465 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 31 :DQNMSILEGSLGVIPRRVL 2cvlA 35 :APDGSLVEGDIRVQTERVM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1466 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 12 :LLSAVGALLDGADIG 2cvlA 52 :VMENLKAVLEAAGSG T0349 37 :LEG 2cvlA 67 :LSR T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLA 2cvlA 70 :VVQTTCFLADMEDFPGFNEVYARYFTP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1469 Number of alignments=442 # 2cvlA read from 2cvlA/merged-a2m # found chain 2cvlA in template set T0349 11 :VLLSAVGALLDGADIG 2cvlA 51 :RVMENLKAVLEAAGSG T0349 37 :LEGSLG 2cvlA 67 :LSRVVQ T0349 45 :PRRVLVHEDDLAGARRLLTDA 2cvlA 73 :TTCFLADMEDFPGFNEVYARY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1472 Number of alignments=443 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g61A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1g61A/merged-a2m # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)L5 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)Y2008 Warning: unaligning (T0349)R6 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)Y2008 Warning: unaligning (T0349)A68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)H2164 Warning: unaligning (T0349)H69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)H2164 T0349 1 :MREL 1g61A 2003 :MIIR T0349 7 :TNDAVLLSAV 1g61A 2022 :TEEITLLPIF T0349 17 :GALLDGAD 1g61A 2045 :ETKCLQTN T0349 25 :IGHLVLDQNMSILEGSLG 1g61A 2072 :LPKIVEDEELDRIKNFLK T0349 43 :VIPR 1g61A 2099 :IIKS T0349 47 :RVLVH 1g61A 2117 :GALIS T0349 52 :EDDLAGARRLLTDA 1g61A 2146 :ELPTVGSNAVVTNK T0349 66 :GL 1g61A 2161 :CL T0349 70 :ELRS 1g61A 2165 :PLVE T0349 74 :D 1g61A 2204 :S Number of specific fragments extracted= 10 number of extra gaps= 2 total=1482 Number of alignments=444 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 23 :ADIGHLVLDQNM 1g61A 2114 :NDKGALISPELK T0349 35 :SILEGSLGVIPRRVLVHEDDLAGARR 1g61A 2129 :KDIEDSLNVEVEIGTIAELPTVGSNA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1484 Number of alignments=445 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)A68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)H2164 Warning: unaligning (T0349)H69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)H2164 T0349 4 :LLRTNDAVLL 1g61A 2019 :ALTTEEITLL T0349 14 :SAVGALLDGADIGHLV 1g61A 2057 :SLVGSLSVANKYGLLL T0349 30 :LDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAG 1g61A 2124 :LKDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKG T0349 67 :L 1g61A 2162 :L T0349 70 :ELRSDD 1g61A 2165 :PLVEDD Number of specific fragments extracted= 5 number of extra gaps= 1 total=1489 Number of alignments=446 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)H69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)H2164 Warning: unaligning (T0349)E70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)H2164 T0349 4 :L 1g61A 2006 :R T0349 5 :LRTNDAVLLS 1g61A 2020 :LTTEEITLLP T0349 15 :AVGALLDGADI 1g61A 2058 :LVGSLSVANKY T0349 26 :GHLVLDQNMSILEGS 1g61A 2073 :PKIVEDEELDRIKNF T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLA 1g61A 2135 :LNVEVEIGTIAELPTVGSNAVVTNKGCL T0349 71 :LRSDD 1g61A 2166 :LVEDD Number of specific fragments extracted= 6 number of extra gaps= 1 total=1495 Number of alignments=447 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 13 :LSAVGALLDGADIGHLV 1g61A 2104 :NTALGNLILTNDKGALI T0349 30 :LDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGL 1g61A 2124 :LKDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGC Number of specific fragments extracted= 2 number of extra gaps= 0 total=1497 Number of alignments=448 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 15 :AVGALLDGADIGHLV 1g61A 2106 :ALGNLILTNDKGALI T0349 30 :LDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGL 1g61A 2124 :LKDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGC Number of specific fragments extracted= 2 number of extra gaps= 0 total=1499 Number of alignments=449 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)A68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)H2164 Warning: unaligning (T0349)H69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)H2164 T0349 2 :RELLRTNDA 1g61A 2095 :LNVEIIKSK T0349 13 :LSAVGALLDGADIGHLV 1g61A 2104 :NTALGNLILTNDKGALI T0349 30 :LDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDA 1g61A 2124 :LKDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNK T0349 66 :GL 1g61A 2161 :CL T0349 70 :ELRSDD 1g61A 2165 :PLVEDD Number of specific fragments extracted= 5 number of extra gaps= 1 total=1504 Number of alignments=450 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)A68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)H2164 Warning: unaligning (T0349)H69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)H2164 T0349 4 :L 1g61A 2006 :R T0349 5 :LRTNDAVLLS 1g61A 2020 :LTTEEITLLP T0349 15 :AVGALLDGADIGHL 1g61A 2058 :LVGSLSVANKYGLL T0349 29 :VL 1g61A 2076 :VE T0349 31 :DQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGL 1g61A 2125 :KDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGC T0349 70 :ELRSDD 1g61A 2165 :PLVEDD Number of specific fragments extracted= 6 number of extra gaps= 1 total=1510 Number of alignments=451 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 13 :LSAVGALLDGADIGHLV 1g61A 2104 :NTALGNLILTNDKGALI T0349 30 :LDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGL 1g61A 2124 :LKDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGC Number of specific fragments extracted= 2 number of extra gaps= 0 total=1512 Number of alignments=452 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 13 :LSAVGALLDGADIGHLV 1g61A 2104 :NTALGNLILTNDKGALI T0349 30 :LDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGL 1g61A 2124 :LKDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGC Number of specific fragments extracted= 2 number of extra gaps= 0 total=1514 Number of alignments=453 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)A68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)H2164 Warning: unaligning (T0349)H69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)H2164 T0349 1 :MRE 1g61A 2003 :MII T0349 4 :LLRTNDAVLL 1g61A 2019 :ALTTEEITLL T0349 14 :SAVGALLDGADIGHLV 1g61A 2057 :SLVGSLSVANKYGLLL T0349 30 :LDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAG 1g61A 2124 :LKDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKG T0349 67 :L 1g61A 2162 :L T0349 70 :ELRSDD 1g61A 2165 :PLVEDD Number of specific fragments extracted= 6 number of extra gaps= 1 total=1520 Number of alignments=454 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)L5 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)Y2008 Warning: unaligning (T0349)R6 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)Y2008 Warning: unaligning (T0349)A68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)H2164 Warning: unaligning (T0349)H69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)H2164 T0349 1 :MREL 1g61A 2003 :MIIR T0349 7 :TNDAVLL 1g61A 2022 :TEEITLL T0349 14 :SAVGALLDGADIGHLV 1g61A 2057 :SLVGSLSVANKYGLLL T0349 30 :LDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGL 1g61A 2124 :LKDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGC T0349 70 :ELRSDD 1g61A 2165 :PLVEDD Number of specific fragments extracted= 5 number of extra gaps= 2 total=1525 Number of alignments=455 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 21 :DGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGL 1g61A 2115 :DKGALISPELKDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGC Number of specific fragments extracted= 1 number of extra gaps= 0 total=1526 Number of alignments=456 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 21 :DGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGL 1g61A 2115 :DKGALISPELKDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGC Number of specific fragments extracted= 1 number of extra gaps= 0 total=1527 Number of alignments=457 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)V43 because last residue in template chain is (1g61A)L2227 T0349 22 :GADIGHLVLDQNMSILEGSLG 1g61A 2206 :GAVVGGDTTGPELLIIEDALG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1528 Number of alignments=458 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1528 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)T7 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)Y2008 Warning: unaligning (T0349)N8 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)Y2008 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :LLR 1g61A 2004 :IIR T0349 9 :DAVLLSAVGALLDGADI 1g61A 2009 :FSGIPTIGVLALTTEEI T0349 26 :GHLVLDQN 1g61A 2047 :KCLQTNIG T0349 36 :ILEGSLGV 1g61A 2057 :SLVGSLSV T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1g61A 2070 :LLLPKIVEDEELDRIKNFLKENNLDLNVEIIK Number of specific fragments extracted= 5 number of extra gaps= 2 total=1533 Number of alignments=459 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :LLR 1g61A 2004 :IIR T0349 7 :T 1g61A 2022 :T T0349 11 :VLLSAVGALLDGADIG 1g61A 2023 :EEITLLPIFLDKDDVN T0349 27 :HLVLDQN 1g61A 2048 :CLQTNIG T0349 36 :ILEGSLGVIPR 1g61A 2057 :SLVGSLSVANK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1g61A 2073 :PKIVEDEELDRIKNFLKENNLDLNVEIIK Number of specific fragments extracted= 6 number of extra gaps= 1 total=1539 Number of alignments=460 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :LLR 1g61A 2004 :IIR T0349 9 :DAVLLSAVGALL 1g61A 2033 :DKDDVNEVSEVL T0349 24 :DIGHLVLDQN 1g61A 2045 :ETKCLQTNIG T0349 36 :ILEGSLGVIPRRVL 1g61A 2057 :SLVGSLSVANKYGL T0349 50 :VHEDDLAGARRLLTDAGLAHE 1g61A 2076 :VEDEELDRIKNFLKENNLDLN Number of specific fragments extracted= 5 number of extra gaps= 1 total=1544 Number of alignments=461 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)N33 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :LLR 1g61A 2004 :IIR T0349 9 :DAVLLSAVGALLD 1g61A 2033 :DKDDVNEVSEVLE T0349 25 :IGHLVLD 1g61A 2046 :TKCLQTN T0349 32 :Q 1g61A 2054 :G T0349 35 :SILEGSLGVIPRRVL 1g61A 2057 :SLVGSLSVANKYGLL T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1g61A 2076 :VEDEELDRIKNFLKENNLDLNV Number of specific fragments extracted= 6 number of extra gaps= 1 total=1550 Number of alignments=462 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 49 :LVHEDDLAGARRLLTDAGLAHE 1g61A 2075 :IVEDEELDRIKNFLKENNLDLN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1551 Number of alignments=463 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 27 :HLVLDQN 1g61A 2048 :CLQTNIG T0349 36 :ILEGSLGVIPR 1g61A 2057 :SLVGSLSVANK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHEL 1g61A 2073 :PKIVEDEELDRIKNFLKENNLDLNV Number of specific fragments extracted= 3 number of extra gaps= 1 total=1554 Number of alignments=464 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 15 :AVGALL 1g61A 2039 :EVSEVL T0349 24 :DIGHLVLDQN 1g61A 2045 :ETKCLQTNIG T0349 36 :ILEGSLGVIPRRVL 1g61A 2057 :SLVGSLSVANKYGL T0349 50 :VHEDDLAGARRLLTDAGLAH 1g61A 2076 :VEDEELDRIKNFLKENNLDL Number of specific fragments extracted= 4 number of extra gaps= 1 total=1558 Number of alignments=465 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)N33 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 13 :LSAVGALLD 1g61A 2037 :VNEVSEVLE T0349 25 :IGHLVLD 1g61A 2046 :TKCLQTN T0349 32 :Q 1g61A 2054 :G T0349 35 :SILEGSLGVIPRRVL 1g61A 2057 :SLVGSLSVANKYGLL T0349 50 :VHEDDLAGARRLLTDAGLAH 1g61A 2076 :VEDEELDRIKNFLKENNLDL Number of specific fragments extracted= 5 number of extra gaps= 1 total=1563 Number of alignments=466 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)T7 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)Y2008 Warning: unaligning (T0349)N8 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)Y2008 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :LLR 1g61A 2004 :IIR T0349 9 :DAVLLSAVGALLDGADI 1g61A 2009 :FSGIPTIGVLALTTEEI T0349 26 :GHLVLDQN 1g61A 2047 :KCLQTNIG T0349 36 :ILEGSLGV 1g61A 2057 :SLVGSLSV T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1g61A 2070 :LLLPKIVEDEELDRIKNFLKENNLDLNVEIIK Number of specific fragments extracted= 5 number of extra gaps= 2 total=1568 Number of alignments=467 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :LLR 1g61A 2004 :IIR T0349 7 :T 1g61A 2022 :T T0349 11 :VLLSAVGALLDGADIG 1g61A 2023 :EEITLLPIFLDKDDVN T0349 27 :HLVLDQN 1g61A 2048 :CLQTNIG T0349 36 :ILEGSLGVIPR 1g61A 2057 :SLVGSLSVANK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1g61A 2073 :PKIVEDEELDRIKNFLKENNLDLNVEIIK Number of specific fragments extracted= 6 number of extra gaps= 1 total=1574 Number of alignments=468 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :LLR 1g61A 2004 :IIR T0349 9 :DAVLLSAVGALLD 1g61A 2033 :DKDDVNEVSEVLE T0349 25 :IGHLVLDQN 1g61A 2046 :TKCLQTNIG T0349 36 :ILEGSLGVIPRRVL 1g61A 2057 :SLVGSLSVANKYGL T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1g61A 2076 :VEDEELDRIKNFLKENNLDLNV Number of specific fragments extracted= 5 number of extra gaps= 1 total=1579 Number of alignments=469 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)T7 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)Y2008 Warning: unaligning (T0349)N8 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)Y2008 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :LLR 1g61A 2004 :IIR T0349 9 :DAVLLSAVGALLD 1g61A 2033 :DKDDVNEVSEVLE T0349 25 :IGHLVLDQN 1g61A 2046 :TKCLQTNIG T0349 36 :ILEGSLGVI 1g61A 2057 :SLVGSLSVA T0349 45 :PRRVL 1g61A 2067 :KYGLL T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1g61A 2076 :VEDEELDRIKNFLKENNLDLNV Number of specific fragments extracted= 6 number of extra gaps= 2 total=1585 Number of alignments=470 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 49 :LVHEDDLAGARRLLTDAGLAHE 1g61A 2075 :IVEDEELDRIKNFLKENNLDLN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1586 Number of alignments=471 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 27 :HLVLDQN 1g61A 2048 :CLQTNIG T0349 36 :ILEGSLGVIPR 1g61A 2057 :SLVGSLSVANK T0349 47 :RVLVHEDDLAGARRLLTDAGLAHEL 1g61A 2073 :PKIVEDEELDRIKNFLKENNLDLNV Number of specific fragments extracted= 3 number of extra gaps= 1 total=1589 Number of alignments=472 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 11 :VLLSAVGALL 1g61A 2035 :DDVNEVSEVL T0349 24 :DIGHLVLDQN 1g61A 2045 :ETKCLQTNIG T0349 36 :ILEGSLGVIPRRVL 1g61A 2057 :SLVGSLSVANKYGL T0349 50 :VHEDDLAGARRLLTDAGLAH 1g61A 2076 :VEDEELDRIKNFLKENNLDL Number of specific fragments extracted= 4 number of extra gaps= 1 total=1593 Number of alignments=473 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 9 :DAVLLSAVGALLD 1g61A 2033 :DKDDVNEVSEVLE T0349 25 :IGHLVLDQN 1g61A 2046 :TKCLQTNIG T0349 36 :ILEGSLGVI 1g61A 2057 :SLVGSLSVA T0349 45 :PRRVL 1g61A 2067 :KYGLL T0349 50 :VHEDDLAGARRLLTDAGLAHE 1g61A 2076 :VEDEELDRIKNFLKENNLDLN Number of specific fragments extracted= 5 number of extra gaps= 1 total=1598 Number of alignments=474 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)T7 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1g61A)Y2008 Warning: unaligning (T0349)N8 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1g61A)Y2008 T0349 4 :LLR 1g61A 2004 :IIR T0349 9 :DAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVL 1g61A 2009 :FSGIPTIGVLALTTEEITLLPIFLDKDDVNEVSEVLETKCL T0349 50 :VHEDDLAGARRLLTDAGLAHELRSDD 1g61A 2076 :VEDEELDRIKNFLKENNLDLNVEIIK Number of specific fragments extracted= 3 number of extra gaps= 1 total=1601 Number of alignments=475 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :LLR 1g61A 2004 :IIR T0349 9 :DAVLLSAVGALLDGADIG 1g61A 2021 :TTEEITLLPIFLDKDDVN T0349 27 :HLVLDQN 1g61A 2048 :CLQTNIG T0349 36 :ILEGSLGV 1g61A 2057 :SLVGSLSV T0349 44 :IP 1g61A 2072 :LP T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSD 1g61A 2074 :KIVEDEELDRIKNFLKENNLDLNVEII Number of specific fragments extracted= 6 number of extra gaps= 1 total=1607 Number of alignments=476 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :L 1g61A 2004 :I T0349 5 :LRTNDAVLL 1g61A 2020 :LTTEEITLL T0349 14 :SAVGALL 1g61A 2038 :NEVSEVL T0349 24 :DIGHLVLDQN 1g61A 2045 :ETKCLQTNIG T0349 36 :ILEGSLGVIPRRVL 1g61A 2057 :SLVGSLSVANKYGL T0349 50 :VHEDDLAGARRLLTDAGLAHELR 1g61A 2076 :VEDEELDRIKNFLKENNLDLNVE Number of specific fragments extracted= 6 number of extra gaps= 1 total=1613 Number of alignments=477 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)E3 because first residue in template chain is (1g61A)M2003 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 4 :L 1g61A 2004 :I T0349 5 :LRTNDAVLL 1g61A 2020 :LTTEEITLL T0349 14 :SAVGALLD 1g61A 2038 :NEVSEVLE T0349 25 :IGHLVLDQN 1g61A 2046 :TKCLQTNIG T0349 36 :ILEGSLG 1g61A 2057 :SLVGSLS T0349 43 :VIPRRVL 1g61A 2065 :ANKYGLL T0349 50 :VHEDDLAGARRLLTDAGLAHELR 1g61A 2076 :VEDEELDRIKNFLKENNLDLNVE Number of specific fragments extracted= 7 number of extra gaps= 1 total=1620 Number of alignments=478 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 49 :LVHEDDLAGARRLLTDAGLAHELR 1g61A 2075 :IVEDEELDRIKNFLKENNLDLNVE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1621 Number of alignments=479 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set T0349 30 :LDQNMSILEGSLGVIPR 1g61A 2058 :LVGSLSVANKYGLLLPK T0349 49 :LVHEDDLAGARRLLTDAGLAHE 1g61A 2075 :IVEDEELDRIKNFLKENNLDLN Number of specific fragments extracted= 2 number of extra gaps= 0 total=1623 Number of alignments=480 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 18 :ALL 1g61A 2042 :EVL T0349 24 :DIGHLVLDQN 1g61A 2045 :ETKCLQTNIG T0349 36 :ILEGSLGVIPRRVL 1g61A 2057 :SLVGSLSVANKYGL T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1g61A 2076 :VEDEELDRIKNFLKENNLDLNV Number of specific fragments extracted= 4 number of extra gaps= 1 total=1627 Number of alignments=481 # 1g61A read from 1g61A/merged-a2m # found chain 1g61A in training set Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (1g61A)S2056 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (1g61A)S2056 T0349 12 :LLSAVGALLD 1g61A 2036 :DVNEVSEVLE T0349 25 :IGHLVLDQN 1g61A 2046 :TKCLQTNIG T0349 36 :ILEGSLG 1g61A 2057 :SLVGSLS T0349 43 :VIPRRVL 1g61A 2065 :ANKYGLL T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1g61A 2076 :VEDEELDRIKNFLKENNLDLNV Number of specific fragments extracted= 5 number of extra gaps= 1 total=1632 Number of alignments=482 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vjqA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1vjqA/merged-a2m # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)V29 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)L30 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)D31 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MRELLRTNDA 1vjqA 1 :KTIFVIVPTN T0349 13 :LSAVGALLDGADIGHL 1vjqA 11 :EEQVAFLEALAKQDEL T0349 32 :QNMSILEGSLGVI 1vjqA 30 :WQNPPTEPGQPVV T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 43 :ILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 4 number of extra gaps= 1 total=1636 Number of alignments=483 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)V29 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)L30 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)D31 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MRELL 1vjqA 1 :KTIFV T0349 6 :RTNDA 1vjqA 8 :PTNEE T0349 15 :AVGALLDGADIGHL 1vjqA 13 :QVAFLEALAKQDEL T0349 32 :QNMSILEGSL 1vjqA 30 :WQNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 5 number of extra gaps= 1 total=1641 Number of alignments=484 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set T0349 44 :IPRRVLVHE 1vjqA 62 :IPFTVYVEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1642 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1642 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)V29 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)L30 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)D31 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MRELLRTNDA 1vjqA 1 :KTIFVIVPTN T0349 13 :LSAVGALLDGADIGHL 1vjqA 11 :EEQVAFLEALAKQDEL T0349 32 :QNMSILEGSLGVI 1vjqA 30 :WQNPPTEPGQPVV T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 43 :ILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 4 number of extra gaps= 1 total=1646 Number of alignments=485 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)V29 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)L30 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)D31 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MRELL 1vjqA 1 :KTIFV T0349 6 :RTNDA 1vjqA 8 :PTNEE T0349 15 :AVGALLDGADIGHL 1vjqA 13 :QVAFLEALAKQDEL T0349 32 :QNMSILEGSL 1vjqA 30 :WQNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 5 number of extra gaps= 1 total=1651 Number of alignments=486 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set T0349 44 :IPRRVLVHE 1vjqA 62 :IPFTVYVEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1652 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1652 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)V29 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)L30 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)D31 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MRELLRTNDAVLLSAVGAL 1vjqA 2 :TIFVIVPTNEEQVAFLEAL T0349 23 :ADIGHL 1vjqA 21 :AKQDEL T0349 32 :QNMSILEGSLGV 1vjqA 30 :WQNPPTEPGQPV T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 42 :VILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 4 number of extra gaps= 1 total=1656 Number of alignments=487 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)V29 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)L30 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)D31 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MR 1vjqA 1 :KT T0349 4 :LLRT 1vjqA 3 :IFVI T0349 8 :NDAVLLSAVGAL 1vjqA 9 :TNEEQVAFLEAL T0349 23 :ADIGHL 1vjqA 21 :AKQDEL T0349 32 :QNMSILEGSL 1vjqA 30 :WQNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 6 number of extra gaps= 1 total=1662 Number of alignments=488 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 39 :QPVVILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1663 Number of alignments=489 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHEL 1vjqA 39 :QPVVILIPSDMVEWFLEMLKAKGIPFTV Number of specific fragments extracted= 1 number of extra gaps= 0 total=1664 Number of alignments=490 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set T0349 44 :IPRRVLVHE 1vjqA 62 :IPFTVYVEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1665 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1665 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 1vjqA 2 :TIFVIVPTNEEQVAFLEALAKQDEL T0349 29 :VLDQNMS 1vjqA 30 :WQNPPTE T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 37 :PGQPVVILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 3 number of extra gaps= 1 total=1668 Number of alignments=491 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :M 1vjqA 1 :K T0349 2 :RELLRTNDAVLLSAVGALLDGADI 1vjqA 3 :IFVIVPTNEEQVAFLEALAKQDEL T0349 29 :VLDQNMS 1vjqA 30 :WQNPPTE T0349 38 :EG 1vjqA 37 :PG T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 39 :QPVVILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 5 number of extra gaps= 1 total=1673 Number of alignments=492 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :M 1vjqA 1 :K T0349 5 :LRTNDAVLLSAVGALLDGADI 1vjqA 6 :IVPTNEEQVAFLEALAKQDEL T0349 29 :V 1vjqA 30 :W T0349 32 :QNMSILEGS 1vjqA 31 :QNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPF Number of specific fragments extracted= 5 number of extra gaps= 1 total=1678 Number of alignments=493 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 Warning: unaligning (T0349)H69 because last residue in template chain is (1vjqA)S73 T0349 1 :M 1vjqA 1 :K T0349 6 :RTNDAVLLSAVGALLDGADI 1vjqA 7 :VPTNEEQVAFLEALAKQDEL T0349 30 :LDQNMS 1vjqA 30 :WQNPPT T0349 38 :EGS 1vjqA 37 :PGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLA 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1683 Number of alignments=494 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1684 Number of alignments=495 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 8 :NDAVLLSAVGALLDGADI 1vjqA 9 :TNEEQVAFLEALAKQDEL T0349 29 :VLDQNMS 1vjqA 30 :WQNPPTE T0349 38 :EG 1vjqA 37 :PG T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAH 1vjqA 39 :QPVVILIPSDMVEWFLEMLKAKGIPF Number of specific fragments extracted= 4 number of extra gaps= 1 total=1688 Number of alignments=496 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 10 :AVLLSAVGALLDGADI 1vjqA 11 :EEQVAFLEALAKQDEL T0349 29 :V 1vjqA 30 :W T0349 32 :QNMSILEGS 1vjqA 31 :QNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPF Number of specific fragments extracted= 4 number of extra gaps= 1 total=1692 Number of alignments=497 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 9 :DAVLLSAVGALLDGADI 1vjqA 10 :NEEQVAFLEALAKQDEL T0349 30 :LDQNMS 1vjqA 30 :WQNPPT T0349 38 :EGS 1vjqA 37 :PGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLA 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1696 Number of alignments=498 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 1vjqA 2 :TIFVIVPTNEEQVAFLEALAKQDEL T0349 29 :VLDQNMS 1vjqA 30 :WQNPPTE T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 37 :PGQPVVILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 3 number of extra gaps= 1 total=1699 Number of alignments=499 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :M 1vjqA 1 :K T0349 2 :RELLRTNDAVLLSAVGALLDGADI 1vjqA 3 :IFVIVPTNEEQVAFLEALAKQDEL T0349 29 :VLDQNMS 1vjqA 30 :WQNPPTE T0349 38 :EG 1vjqA 37 :PG T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 39 :QPVVILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 5 number of extra gaps= 1 total=1704 Number of alignments=500 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 Warning: unaligning (T0349)D74 because last residue in template chain is (1vjqA)S73 T0349 1 :MRE 1vjqA 1 :KTI T0349 4 :LLRTNDAVLLSAVGALLDGADI 1vjqA 5 :VIVPTNEEQVAFLEALAKQDEL T0349 29 :V 1vjqA 30 :W T0349 32 :QNMSILEGS 1vjqA 31 :QNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLA 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIP T0349 70 :ELRS 1vjqA 69 :EEGG Number of specific fragments extracted= 6 number of extra gaps= 1 total=1710 Number of alignments=501 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MREL 1vjqA 1 :KTIF T0349 5 :LRTNDAVLLSAVGALLDGADI 1vjqA 6 :IVPTNEEQVAFLEALAKQDEL T0349 30 :L 1vjqA 30 :W T0349 32 :QNMSILEGS 1vjqA 31 :QNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHEL 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPFTV Number of specific fragments extracted= 5 number of extra gaps= 1 total=1715 Number of alignments=502 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1716 Number of alignments=503 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 8 :NDAVLLSAVGALLDGADI 1vjqA 9 :TNEEQVAFLEALAKQDEL T0349 29 :VLDQNMS 1vjqA 30 :WQNPPTE T0349 38 :EG 1vjqA 37 :PG T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAH 1vjqA 39 :QPVVILIPSDMVEWFLEMLKAKGIPF Number of specific fragments extracted= 4 number of extra gaps= 1 total=1720 Number of alignments=504 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 6 :RTNDAVLLSAVGALLDGADI 1vjqA 7 :VPTNEEQVAFLEALAKQDEL T0349 29 :V 1vjqA 30 :W T0349 32 :QNMSILEGS 1vjqA 31 :QNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPFT Number of specific fragments extracted= 4 number of extra gaps= 1 total=1724 Number of alignments=505 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 5 :LRTNDAVLLSAVGALLDGADI 1vjqA 6 :IVPTNEEQVAFLEALAKQDEL T0349 30 :L 1vjqA 30 :W T0349 32 :QNMSILEGS 1vjqA 31 :QNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPFT Number of specific fragments extracted= 4 number of extra gaps= 1 total=1728 Number of alignments=506 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 1vjqA 2 :TIFVIVPTNEEQVAFLEALAKQDEL T0349 29 :VLDQNMSILE 1vjqA 30 :WQNPPTEPGQ T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 3 number of extra gaps= 1 total=1731 Number of alignments=507 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 1 :MRE 1vjqA 1 :KTI T0349 4 :LLRTNDAVLLSAVGALLDGADI 1vjqA 5 :VIVPTNEEQVAFLEALAKQDEL T0349 29 :VLDQNMSI 1vjqA 30 :WQNPPTEP T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1vjqA 38 :GQPVVILIPSDMVEWFLEMLKAKGIPFTVYVEE Number of specific fragments extracted= 4 number of extra gaps= 1 total=1735 Number of alignments=508 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set T0349 1 :MRELLR 1vjqA 1 :KTIFVI T0349 7 :TNDAVLLSAVGALLDGAD 1vjqA 8 :PTNEEQVAFLEALAKQDE T0349 32 :QNMSI 1vjqA 31 :QNPPT T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHEL 1vjqA 36 :EPGQPVVILIPSDMVEWFLEMLKAKGIPFTV Number of specific fragments extracted= 4 number of extra gaps= 0 total=1739 Number of alignments=509 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)N33 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)S35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 Warning: unaligning (T0349)H69 because last residue in template chain is (1vjqA)S73 T0349 1 :MREL 1vjqA 1 :KTIF T0349 5 :LRTNDAVLLSAVGALLDGAD 1vjqA 6 :IVPTNEEQVAFLEALAKQDE T0349 32 :Q 1vjqA 26 :L T0349 36 :ILEGS 1vjqA 30 :WQNPP T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLA 1vjqA 36 :EPGQPVVILIPSDMVEWFLEMLKAKGIP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1744 Number of alignments=510 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set T0349 45 :PRRVLVHEDDLAGARRLLTDAGLA 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1745 Number of alignments=511 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)G26 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)H27 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)L28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 9 :DAVLLSAVGALLDGADI 1vjqA 10 :NEEQVAFLEALAKQDEL T0349 29 :VLDQNMSI 1vjqA 30 :WQNPPTEP T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAH 1vjqA 38 :GQPVVILIPSDMVEWFLEMLKAKGIPF Number of specific fragments extracted= 3 number of extra gaps= 1 total=1748 Number of alignments=512 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1vjqA 40 :PVVILIPSDMVEWFLEMLKAKGIPF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1749 Number of alignments=513 # 1vjqA read from 1vjqA/merged-a2m # found chain 1vjqA in template set Warning: unaligning (T0349)N33 because of BadResidue code BAD_PEPTIDE in next template residue (1vjqA)F28 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE at template residue (1vjqA)F28 Warning: unaligning (T0349)S35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vjqA)D29 T0349 4 :LLRTNDAVLLSAVGALLDGAD 1vjqA 5 :VIVPTNEEQVAFLEALAKQDE T0349 32 :Q 1vjqA 26 :L T0349 36 :ILEGS 1vjqA 30 :WQNPP T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLA 1vjqA 36 :EPGQPVVILIPSDMVEWFLEMLKAKGIP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1753 Number of alignments=514 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1pba/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1pba expands to /projects/compbio/data/pdb/1pba.pdb.gz 1pba:Warning: there is no chain 1pba will retry with 1pbaA # T0349 read from 1pba/merged-a2m # 1pba read from 1pba/merged-a2m # adding 1pba to template set # found chain 1pba in template set Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRELLR 1pba 1 :HHSGEH T0349 7 :TNDAVLLSAVGALLDGADIGHLVLDQNMSIL 1pba 8 :EGEKVFRVNVEDENDISELHELASTRQIDFW T0349 40 :SL 1pba 41 :DS T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 48 :PHSTVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1757 Number of alignments=515 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 T0349 1 :MRELLR 1pba 1 :HHSGEH T0349 7 :TNDAVLLSAVGALLDGADIGHLVLDQNMSIL 1pba 8 :EGEKVFRVNVEDENDISELHELASTRQIDFW T0349 39 :GS 1pba 41 :DS T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 47 :KPHSTVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1761 Number of alignments=516 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 13 :LSAVGALLDGADIGHLVL 1pba 61 :ILAVEDFLEQNELQYEVL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1762 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1763 Number of alignments=517 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRELLRTNDAVLLSAVGALLDGAD 1pba 1 :HHSGEHFEGEKVFRVNVEDENDIS T0349 25 :IGHLVLDQNMSIL 1pba 26 :LHELASTRQIDFW T0349 40 :SL 1pba 41 :DS T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 48 :PHSTVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1767 Number of alignments=518 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 T0349 1 :MRELLRTNDAVLLSAVGAL 1pba 1 :HHSGEHFEGEKVFRVNVED T0349 20 :LDGADIGHLVLDQNMSIL 1pba 21 :NDISELHELASTRQIDFW T0349 39 :GSL 1pba 41 :DSV T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 48 :PHSTVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1771 Number of alignments=519 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 9 :DAVLLSAVGALLDGADIGHLVL 1pba 57 :KAEDILAVEDFLEQNELQYEVL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1772 Number of alignments=520 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 13 :LSAVGALLDGADIGHLVL 1pba 61 :ILAVEDFLEQNELQYEVL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1773 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSIL 1pba 2 :HSGEHFEGEKVFRVNVEDENDISELHELASTRQIDFW T0349 40 :SL 1pba 41 :DS T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 48 :PHSTVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 3 number of extra gaps= 1 total=1776 Number of alignments=521 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)E38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)G39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSIL 1pba 2 :HSGEHFEGEKVFRVNVEDENDISELHELASTRQIDFW T0349 40 :SL 1pba 41 :DS T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 48 :PHSTVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 3 number of extra gaps= 1 total=1779 Number of alignments=522 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 50 :STVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1780 Number of alignments=523 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 50 :STVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1781 Number of alignments=524 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)M34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)S35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :M 1pba 1 :H T0349 2 :RELLRTNDAVLL 1pba 5 :EHFEGEKVFRVN T0349 14 :SAVGALLDGADI 1pba 21 :NDISELHELAST T0349 28 :LVLDQN 1pba 33 :RQIDFW T0349 36 :IL 1pba 41 :DS T0349 38 :EGSL 1pba 47 :KPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELR 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYEVL Number of specific fragments extracted= 7 number of extra gaps= 1 total=1788 Number of alignments=525 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 23 :ADI 1pba 30 :AST T0349 28 :LVLD 1pba 33 :RQID Number of specific fragments extracted= 2 number of extra gaps= 0 total=1790 Number of alignments=526 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1pba 56 :VKAEDILAVEDFLEQNELQYEV Number of specific fragments extracted= 1 number of extra gaps= 0 total=1791 Number of alignments=527 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1791 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRE 1pba 1 :HHS T0349 4 :LLRTNDAVLLSAVGALLDGADIGHL 1pba 14 :RVNVEDENDISELHELASTRQIDFW T0349 31 :DQNMSILEGS 1pba 41 :DSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1795 Number of alignments=528 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRE 1pba 1 :HHS T0349 4 :LLRTNDAVLLSAVGALLDGADIGHL 1pba 14 :RVNVEDENDISELHELASTRQIDFW T0349 31 :DQNMSILEGS 1pba 41 :DSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1799 Number of alignments=529 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :M 1pba 1 :H T0349 8 :NDAVLLSAVGALLDGADIGHL 1pba 18 :EDENDISELHELASTRQIDFW T0349 31 :DQNMSILEGSLG 1pba 41 :DSVTQIKPHSTV T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 53 :DFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1803 Number of alignments=530 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)Q32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)N33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :M 1pba 1 :H T0349 8 :NDAVLLSAVGALLDGADIGH 1pba 18 :EDENDISELHELASTRQIDF T0349 31 :D 1pba 38 :W T0349 34 :MSILE 1pba 41 :DSVTQ T0349 39 :GS 1pba 49 :HS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 6 number of extra gaps= 1 total=1809 Number of alignments=531 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 50 :VHEDDLAGARRLLTDAGLAHE 1pba 56 :VKAEDILAVEDFLEQNELQYE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1810 Number of alignments=532 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 9 :DAVLLSAVGALLDGADIGHL 1pba 19 :DENDISELHELASTRQIDFW T0349 31 :DQNMSILEGS 1pba 41 :DSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYE Number of specific fragments extracted= 3 number of extra gaps= 1 total=1813 Number of alignments=533 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 10 :AVLLSAVGALLDGADIGHL 1pba 20 :ENDISELHELASTRQIDFW T0349 31 :DQNMSILEGSLG 1pba 41 :DSVTQIKPHSTV T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 53 :DFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 3 number of extra gaps= 1 total=1816 Number of alignments=534 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)Q32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)N33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 9 :DAVLLSAVGALLDGADIGH 1pba 19 :DENDISELHELASTRQIDF T0349 31 :D 1pba 38 :W T0349 34 :MSILE 1pba 41 :DSVTQ T0349 39 :GS 1pba 49 :HS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYE Number of specific fragments extracted= 5 number of extra gaps= 1 total=1821 Number of alignments=535 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRE 1pba 1 :HHS T0349 4 :LLRTNDAVLLSAVGALLDGADIGHL 1pba 14 :RVNVEDENDISELHELASTRQIDFW T0349 31 :DQNMSILEGS 1pba 41 :DSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1825 Number of alignments=536 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRE 1pba 1 :HHS T0349 4 :LLRTNDAVLLSAVGALLDGADIGHL 1pba 14 :RVNVEDENDISELHELASTRQIDFW T0349 31 :DQNMSILEGS 1pba 41 :DSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1829 Number of alignments=537 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRE 1pba 1 :HHS T0349 4 :LLRTNDAVLLSAVGALLDGADIGHL 1pba 14 :RVNVEDENDISELHELASTRQIDFW T0349 31 :DQNMSILEGSLGVI 1pba 41 :DSVTQIKPHSTVDF T0349 49 :LVHEDDLAGARRLLTDAGLAHELRSDD 1pba 55 :RVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1833 Number of alignments=538 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)Q32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)N33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRE 1pba 1 :HHS T0349 4 :LLRTNDAVLLSAVGALLDGADIGHL 1pba 14 :RVNVEDENDISELHELASTRQIDFW T0349 34 :MSILE 1pba 41 :DSVTQ T0349 39 :GS 1pba 49 :HS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 5 number of extra gaps= 1 total=1838 Number of alignments=539 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 50 :VHEDDLAGARRLLTDAGLAHE 1pba 56 :VKAEDILAVEDFLEQNELQYE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1839 Number of alignments=540 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 9 :DAVLLSAVGALLDGADIGHL 1pba 19 :DENDISELHELASTRQIDFW T0349 31 :DQNMSILEGS 1pba 41 :DSVTQIKPHS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYE Number of specific fragments extracted= 3 number of extra gaps= 1 total=1842 Number of alignments=541 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 8 :NDAVLLSAVGALLDGADIGHL 1pba 18 :EDENDISELHELASTRQIDFW T0349 31 :DQNMSILEGSLGVI 1pba 41 :DSVTQIKPHSTVDF T0349 49 :LVHEDDLAGARRLLTDAGLAHELRSDD 1pba 55 :RVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 3 number of extra gaps= 1 total=1845 Number of alignments=542 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)Q32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)N33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 5 :LRTNDAVLLSAVGALLDGADIGHL 1pba 15 :VNVEDENDISELHELASTRQIDFW T0349 34 :MSILE 1pba 41 :DSVTQ T0349 39 :GS 1pba 49 :HS T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELR 1pba 51 :TVDFRVKAEDILAVEDFLEQNELQYEVL Number of specific fragments extracted= 4 number of extra gaps= 1 total=1849 Number of alignments=543 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRE 1pba 1 :HHS T0349 4 :LLRTNDAVLLSAVGALLDGADIGHL 1pba 14 :RVNVEDENDISELHELASTRQIDFW T0349 31 :DQNMSILEGSLGVIP 1pba 41 :DSVTQIKPHSTVDFR T0349 50 :VHEDDLAGARRLLTDAGLAHELRSDD 1pba 56 :VKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1853 Number of alignments=544 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRE 1pba 1 :HHS T0349 5 :LRTNDAVLLSAVGALLDGADIGHL 1pba 15 :VNVEDENDISELHELASTRQIDFW T0349 31 :DQNMSILEGSL 1pba 41 :DSVTQIKPHST T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 52 :VDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1857 Number of alignments=545 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)I36 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L37 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MR 1pba 1 :HH T0349 5 :LRTNDAVLLSAVGALLDGADIG 1pba 15 :VNVEDENDISELHELASTRQID T0349 38 :EGSLGVIPRR 1pba 41 :DSVTQIKPHS T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 54 :FRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 4 number of extra gaps= 1 total=1861 Number of alignments=546 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)Q32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)N33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 1 :MRE 1pba 1 :HHS T0349 4 :LLRTNDAVLLSAVGALLDGADIG 1pba 14 :RVNVEDENDISELHELASTRQID T0349 30 :LD 1pba 37 :FW T0349 34 :MSILE 1pba 41 :DSVTQ T0349 39 :GSL 1pba 49 :HST T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1pba 52 :VDFRVKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 6 number of extra gaps= 1 total=1867 Number of alignments=547 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1pba 56 :VKAEDILAVEDFLEQNELQYEV Number of specific fragments extracted= 1 number of extra gaps= 0 total=1868 Number of alignments=548 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)V29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 12 :LLSAVGALLDGADIGHL 1pba 22 :DISELHELASTRQIDFW T0349 31 :DQNMSILEGSL 1pba 41 :DSVTQIKPHST T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHE 1pba 52 :VDFRVKAEDILAVEDFLEQNELQYE Number of specific fragments extracted= 3 number of extra gaps= 1 total=1871 Number of alignments=549 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set T0349 50 :VHEDDLAGARRLLTDAGLAHELRSDD 1pba 56 :VKAEDILAVEDFLEQNELQYEVLINN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1872 Number of alignments=550 # 1pba read from 1pba/merged-a2m # found chain 1pba in template set Warning: unaligning (T0349)Q32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1pba)P40 Warning: unaligning (T0349)N33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1pba)P40 T0349 5 :LRTNDAVLLSAVGALLDGADIG 1pba 15 :VNVEDENDISELHELASTRQID T0349 30 :LD 1pba 37 :FW T0349 34 :MSILE 1pba 41 :DSVTQ T0349 39 :GSL 1pba 49 :HST T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHE 1pba 52 :VDFRVKAEDILAVEDFLEQNELQYE Number of specific fragments extracted= 5 number of extra gaps= 1 total=1877 Number of alignments=551 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2gukA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2gukA expands to /projects/compbio/data/pdb/2guk.pdb.gz 2gukA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 271, because occupancy 0.400 <= existing 0.600 in 2gukA Skipped atom 273, because occupancy 0.400 <= existing 0.600 in 2gukA Skipped atom 275, because occupancy 0.400 <= existing 0.600 in 2gukA Skipped atom 277, because occupancy 0.400 <= existing 0.600 in 2gukA Skipped atom 279, because occupancy 0.400 <= existing 0.600 in 2gukA Skipped atom 281, because occupancy 0.400 <= existing 0.600 in 2gukA Skipped atom 283, because occupancy 0.400 <= existing 0.600 in 2gukA Skipped atom 285, because occupancy 0.400 <= existing 0.600 in 2gukA Skipped atom 376, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 378, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 380, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 382, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 384, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 386, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 388, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 390, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 392, because occupancy 0.500 <= existing 0.500 in 2gukA Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 589, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 591, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 593, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 595, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 597, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 599, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 601, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 603, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 605, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 620, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 622, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 624, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 626, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 628, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 630, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 632, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 634, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 636, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 638, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 640, because occupancy 0.500 <= existing 0.500 in 2gukA Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 930, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 932, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 934, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 936, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 938, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 940, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 942, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 944, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 946, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 948, because occupancy 0.500 <= existing 0.500 in 2gukA Skipped atom 950, because occupancy 0.500 <= existing 0.500 in 2gukA # T0349 read from 2gukA/merged-a2m # 2gukA read from 2gukA/merged-a2m # adding 2gukA to template set # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)Q32 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)A65 because last residue in template chain is (2gukA)K114 T0349 1 :MREL 2gukA 24 :VRSM T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVL 2gukA 29 :LATLANDDIPYAEERLRSRQIPYFAQ T0349 33 :NMSILEGSLGVIPRRVLVHE 2gukA 61 :RTNLFFGCKECMEAIRLFVS T0349 53 :DDLAGARRLLTD 2gukA 102 :DICRQCERYCRR Number of specific fragments extracted= 4 number of extra gaps= 1 total=1881 Number of alignments=552 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)Q32 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T59 Warning: unaligning (T0349)A65 because last residue in template chain is (2gukA)K114 T0349 1 :M 2gukA 4 :Q T0349 2 :RE 2gukA 25 :RS T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 28 :VLATLANDDIPYAEERLRSRQIPYFAQ T0349 33 :N 2gukA 57 :P T0349 35 :SILEGSLGVI 2gukA 63 :NLFFGCKECM T0349 45 :PRRVLVHEDDLA 2gukA 83 :SLNSLTPEEDFI T0349 57 :GARRLLTD 2gukA 106 :QCERYCRR Number of specific fragments extracted= 7 number of extra gaps= 2 total=1888 Number of alignments=553 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 28 :VLATLANDDIPYAEERLRSRQIPYFAQ Number of specific fragments extracted= 1 number of extra gaps= 1 total=1889 Number of alignments=554 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)Q32 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T59 T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVL 2gukA 29 :LATLANDDIPYAEERLRSRQIPYFAQ T0349 33 :N 2gukA 57 :P T0349 35 :SIL 2gukA 63 :NLF Number of specific fragments extracted= 3 number of extra gaps= 2 total=1892 Number of alignments=555 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)Q32 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T59 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T59 Warning: unaligning (T0349)A65 because last residue in template chain is (2gukA)K114 T0349 1 :MREL 2gukA 24 :VRSM T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVL 2gukA 29 :LATLANDDIPYAEERLRSRQIPYFAQ T0349 33 :N 2gukA 57 :P T0349 36 :ILEGSLGVIPRRVLVHE 2gukA 65 :FFGCKECMEAIRLFVSG T0349 53 :DDLAGARRLLTD 2gukA 102 :DICRQCERYCRR Number of specific fragments extracted= 5 number of extra gaps= 2 total=1897 Number of alignments=556 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)Q32 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T59 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T59 Warning: unaligning (T0349)A65 because last residue in template chain is (2gukA)K114 T0349 1 :M 2gukA 4 :Q T0349 2 :RE 2gukA 25 :RS T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 28 :VLATLANDDIPYAEERLRSRQIPYFAQ T0349 33 :N 2gukA 57 :P T0349 36 :ILEGSLGVI 2gukA 64 :LFFGCKECM T0349 45 :PRRVLVHEDDLA 2gukA 83 :SLNSLTPEEDFI T0349 57 :GARRLLTD 2gukA 106 :QCERYCRR Number of specific fragments extracted= 7 number of extra gaps= 2 total=1904 Number of alignments=557 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 28 :VLATLANDDIPYAEERLRSRQIPYFAQ Number of specific fragments extracted= 1 number of extra gaps= 1 total=1905 Number of alignments=558 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)Q32 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)M34 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T59 Warning: unaligning (T0349)S35 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T59 T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVL 2gukA 29 :LATLANDDIPYAEERLRSRQIPYFAQ T0349 33 :N 2gukA 57 :P Number of specific fragments extracted= 2 number of extra gaps= 2 total=1907 Number of alignments=559 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)Q32 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 T0349 1 :MREL 2gukA 24 :VRSM T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVL 2gukA 29 :LATLANDDIPYAEERLRSRQIPYFAQ T0349 33 :N 2gukA 57 :P T0349 34 :MSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 2gukA 72 :MEAIRLFVSGRSLNSLTPEEDFIIGAMLGYDICRQCERYCRR Number of specific fragments extracted= 4 number of extra gaps= 1 total=1911 Number of alignments=560 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)Q32 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 T0349 1 :MRE 2gukA 24 :VRS T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 28 :VLATLANDDIPYAEERLRSRQIPYFAQ T0349 33 :N 2gukA 57 :P T0349 34 :MSILEGSLGV 2gukA 62 :TNLFFGCKEC T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHE 2gukA 82 :RSLNSLTPEEDFIIGAMLGYDICRQCE T0349 71 :LRSDD 2gukA 110 :YCRRK Number of specific fragments extracted= 6 number of extra gaps= 1 total=1917 Number of alignments=561 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 28 :VLATLANDDIPYAEERLRSRQIPYFAQ Number of specific fragments extracted= 1 number of extra gaps= 1 total=1918 Number of alignments=562 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)Q32 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 T0349 5 :LRTNDAVLLSAVGALLDGADIGHLVL 2gukA 29 :LATLANDDIPYAEERLRSRQIPYFAQ T0349 33 :N 2gukA 57 :P Number of specific fragments extracted= 2 number of extra gaps= 1 total=1920 Number of alignments=563 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 13 :LSAVGALLDGADIGHLVLDQNMSI 2gukA 72 :MEAIRLFVSGRSLNSLTPEEDFII Number of specific fragments extracted= 1 number of extra gaps= 0 total=1921 Number of alignments=564 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1921 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)R72 because last residue in template chain is (2gukA)K114 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 25 :RSMVLATLANDDIPYAEERLRSRQIPYFAQ T0349 32 :QNMSILEGSLGVIPR 2gukA 60 :ERTNLFFGCKECMEA T0349 47 :RVLVHEDDLAG 2gukA 76 :RLFVSGRSLNS T0349 58 :ARRLLTDAGLAHEL 2gukA 100 :GYDICRQCERYCRR Number of specific fragments extracted= 4 number of extra gaps= 1 total=1925 Number of alignments=565 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)R72 because last residue in template chain is (2gukA)K114 T0349 1 :M 2gukA 14 :M T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 28 :VLATLANDDIPYAEERLRSRQIPYFAQ T0349 32 :QNMSILEGSLGVIP 2gukA 60 :ERTNLFFGCKECME T0349 46 :RRVLVHEDDLAG 2gukA 75 :IRLFVSGRSLNS T0349 58 :ARRLLTDAGLAHEL 2gukA 100 :GYDICRQCERYCRR Number of specific fragments extracted= 5 number of extra gaps= 1 total=1930 Number of alignments=566 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)E70 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)L71 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)S73 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T59 Warning: unaligning (T0349)D74 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T59 T0349 5 :LRTNDAVLLSAVGALLDGAD 2gukA 6 :LNSDLRVFMHHIYEFEKGVR T0349 27 :H 2gukA 26 :S T0349 43 :VI 2gukA 27 :MV T0349 47 :RVLVHEDDLAGARRLLTDAGLAH 2gukA 29 :LATLANDDIPYAEERLRSRQIPY T0349 72 :R 2gukA 57 :P Number of specific fragments extracted= 5 number of extra gaps= 2 total=1935 Number of alignments=567 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)E70 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)L71 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)S73 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T59 Warning: unaligning (T0349)D74 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T59 T0349 5 :LRTNDAVLLSAVGALLDGAD 2gukA 6 :LNSDLRVFMHHIYEFEKGVR T0349 40 :SLG 2gukA 26 :SMV T0349 47 :RVLVHEDDLAGARRLLTDAGLA 2gukA 29 :LATLANDDIPYAEERLRSRQIP T0349 72 :R 2gukA 57 :P Number of specific fragments extracted= 4 number of extra gaps= 2 total=1939 Number of alignments=568 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 13 :LSAVGALLDGADIGHL 2gukA 37 :IPYAEERLRSRQIPYF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1940 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 13 :LSAVGALLDGADIGHLV 2gukA 37 :IPYAEERLRSRQIPYFA Number of specific fragments extracted= 1 number of extra gaps= 0 total=1941 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 50 :VHEDDLAGARRLLTDAGLAH 2gukA 32 :LANDDIPYAEERLRSRQIPY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1942 Number of alignments=569 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 10 :AVLLSAVGALLDGAD 2gukA 11 :RVFMHHIYEFEKGVR T0349 40 :SL 2gukA 26 :SM T0349 46 :RRVLVHEDDLAGARRLLTDAGLA 2gukA 28 :VLATLANDDIPYAEERLRSRQIP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1945 Number of alignments=570 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)R72 because last residue in template chain is (2gukA)K114 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 25 :RSMVLATLANDDIPYAEERLRSRQIPYFAQ T0349 32 :QNMSILEGSLGVIPR 2gukA 60 :ERTNLFFGCKECMEA T0349 47 :RVLVHEDDLAG 2gukA 76 :RLFVSGRSLNS T0349 58 :ARRLLTDAGLAHEL 2gukA 100 :GYDICRQCERYCRR Number of specific fragments extracted= 4 number of extra gaps= 1 total=1949 Number of alignments=571 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)R72 because last residue in template chain is (2gukA)K114 T0349 1 :M 2gukA 14 :M T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 28 :VLATLANDDIPYAEERLRSRQIPYFAQ T0349 32 :QNMSILEGSLGVIP 2gukA 60 :ERTNLFFGCKECME T0349 46 :RRVLVHEDDLAG 2gukA 75 :IRLFVSGRSLNS T0349 58 :ARRLLTDAGLAHEL 2gukA 100 :GYDICRQCERYCRR Number of specific fragments extracted= 5 number of extra gaps= 1 total=1954 Number of alignments=572 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)E3 because first residue in template chain is (2gukA)Q4 Warning: unaligning (T0349)E70 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)L71 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)S73 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T59 Warning: unaligning (T0349)D74 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T59 T0349 4 :LLRTNDAVLLSAVGALLDGAD 2gukA 5 :TLNSDLRVFMHHIYEFEKGVR T0349 42 :GV 2gukA 26 :SM T0349 46 :RRVLVHEDDLAGARRLLTDAGLAH 2gukA 28 :VLATLANDDIPYAEERLRSRQIPY T0349 72 :R 2gukA 57 :P Number of specific fragments extracted= 4 number of extra gaps= 2 total=1958 Number of alignments=573 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)R72 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)D74 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T59 Warning: unaligning (T0349)D75 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T59 T0349 5 :LRTNDAVLLSAVGALLDGAD 2gukA 6 :LNSDLRVFMHHIYEFEKGVR T0349 42 :G 2gukA 26 :S T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHEL 2gukA 27 :MVLATLANDDIPYAEERLRSRQIPYFA T0349 73 :S 2gukA 57 :P Number of specific fragments extracted= 4 number of extra gaps= 2 total=1962 Number of alignments=574 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 13 :LSAVGALLDGADIGHL 2gukA 37 :IPYAEERLRSRQIPYF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1963 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 13 :LSAVGALLDGADIGHLV 2gukA 37 :IPYAEERLRSRQIPYFA Number of specific fragments extracted= 1 number of extra gaps= 0 total=1964 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 49 :LVHEDDLAGARRLLTDAGLAH 2gukA 31 :TLANDDIPYAEERLRSRQIPY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1965 Number of alignments=575 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 9 :DAVLLSAVGALLDGAD 2gukA 10 :LRVFMHHIYEFEKGVR T0349 40 :S 2gukA 26 :S T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 2gukA 27 :MVLATLANDDIPYAEERLRSRQIPYF Number of specific fragments extracted= 3 number of extra gaps= 0 total=1968 Number of alignments=576 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 T0349 1 :MRELLRTNDAVL 2gukA 14 :MHHIYEFEKGVR T0349 14 :SAVGALLDGADIGHLVLDQNMSILEGSLG 2gukA 26 :SMVLATLANDDIPYAEERLRSRQIPYFAQ T0349 45 :P 2gukA 57 :P T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 2gukA 62 :TNLFFGCKECMEAIRLFVSGRSLNSLTPEE Number of specific fragments extracted= 4 number of extra gaps= 1 total=1972 Number of alignments=577 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)D31 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)R72 because last residue in template chain is (2gukA)K114 T0349 1 :MRE 2gukA 14 :MHH T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVL 2gukA 28 :VLATLANDDIPYAEERLRSRQIPYFAQ T0349 32 :QNMSILEGSLGVI 2gukA 60 :ERTNLFFGCKECM T0349 45 :PRRVLVHEDDLAG 2gukA 74 :AIRLFVSGRSLNS T0349 58 :ARRLLTDAGLAHEL 2gukA 100 :GYDICRQCERYCRR Number of specific fragments extracted= 5 number of extra gaps= 1 total=1977 Number of alignments=578 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)G39 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 Warning: unaligning (T0349)S40 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T56 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T59 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE at template residue (2gukA)T59 T0349 4 :LLR 2gukA 27 :MVL T0349 13 :LSAVGALLDGADIGHLV 2gukA 37 :IPYAEERLRSRQIPYFA T0349 38 :E 2gukA 54 :Q T0349 41 :L 2gukA 57 :P T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHELRS 2gukA 60 :ERTNLFFGCKECMEAIRLFVSGRSLNSLTP Number of specific fragments extracted= 5 number of extra gaps= 2 total=1982 Number of alignments=579 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)T7 because first residue in template chain is (2gukA)Q4 Warning: unaligning (T0349)S73 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 T0349 8 :NDAVLLSAVGALLDG 2gukA 5 :TLNSDLRVFMHHIYE T0349 38 :EGSLGVIPR 2gukA 22 :KGVRSMVLA T0349 49 :LVHEDDLAGARRLLTDAGLAHELR 2gukA 31 :TLANDDIPYAEERLRSRQIPYFAQ Number of specific fragments extracted= 3 number of extra gaps= 1 total=1985 Number of alignments=580 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 13 :LSAVGALLDGADIGHL 2gukA 37 :IPYAEERLRSRQIPYF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1986 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 13 :LSAVGALLDGADIGHLV 2gukA 37 :IPYAEERLRSRQIPYFA Number of specific fragments extracted= 1 number of extra gaps= 0 total=1987 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set Warning: unaligning (T0349)S73 because of BadResidue code BAD_PEPTIDE in next template residue (2gukA)T56 T0349 51 :HEDDLAGARRLLTDAGLAHELR 2gukA 33 :ANDDIPYAEERLRSRQIPYFAQ Number of specific fragments extracted= 1 number of extra gaps= 1 total=1988 Number of alignments=581 # 2gukA read from 2gukA/merged-a2m # found chain 2gukA in template set T0349 48 :VLVHEDDLAGARRLLTDAGLA 2gukA 30 :ATLANDDIPYAEERLRSRQIP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1989 Number of alignments=582 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zvpA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1zvpA/merged-a2m # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)L67 because last residue in template chain is (1zvpA)Q131 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQN 1zvpA 7 :LELLLQSMSPELMAGDYVFCTVNGALSDYLSLE T0349 34 :MSILEGSLGVIPRR 1zvpA 44 :FREPEGLTLVLEAE T0349 48 :VLVHEDDLAGARRLLTDAG 1zvpA 112 :IFVQKEKAQQALQALGEFA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1992 Number of alignments=583 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)H51 because of BadResidue code BAD_PEPTIDE in next template residue (1zvpA)S79 Warning: unaligning (T0349)E52 because of BadResidue code BAD_PEPTIDE at template residue (1zvpA)S79 Warning: unaligning (T0349)D54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1zvpA)E82 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQN 1zvpA 7 :LELLLQSMSPELMAGDYVFCTVNGALSDYLSLE T0349 34 :MSILEGSLGVIPRRVL 1zvpA 44 :FREPEGLTLVLEAEKA T0349 50 :V 1zvpA 77 :V T0349 55 :L 1zvpA 83 :A T0349 56 :AGARRLLTDAGLA 1zvpA 88 :AAFATKLAEHGIS Number of specific fragments extracted= 5 number of extra gaps= 1 total=1997 Number of alignments=584 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 12 :LLSAVGALLDGADIG 1zvpA 86 :LTAAFATKLAEHGIS Number of specific fragments extracted= 1 number of extra gaps= 0 total=1998 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1998 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)L67 because last residue in template chain is (1zvpA)Q131 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSIL 1zvpA 7 :LELLLQSMSPELMAGDYVFCTVNGALSDYLSLEPIAT T0349 38 :EGSLGVIPRR 1zvpA 48 :EGLTLVLEAE T0349 48 :VLVHEDDLAGARRLLTDAG 1zvpA 112 :IFVQKEKAQQALQALGEFA Number of specific fragments extracted= 3 number of extra gaps= 0 total=2001 Number of alignments=585 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)L37 because of BadResidue code BAD_PEPTIDE in next template residue (1zvpA)S79 Warning: unaligning (T0349)E38 because of BadResidue code BAD_PEPTIDE at template residue (1zvpA)S79 Warning: unaligning (T0349)G39 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1zvpA)E82 Warning: unaligning (T0349)L67 because last residue in template chain is (1zvpA)Q131 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIG 1zvpA 7 :LELLLQSMSPELMAGDYVFCTVNGAL T0349 27 :HLVLDQN 1zvpA 51 :TLVLEAE T0349 34 :MSI 1zvpA 75 :LTV T0349 40 :SLGVI 1zvpA 83 :AVGLT T0349 45 :PRRVLVHEDDLAGARRLLTDAG 1zvpA 109 :HDHIFVQKEKAQQALQALGEFA Number of specific fragments extracted= 5 number of extra gaps= 1 total=2006 Number of alignments=586 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 12 :LLSAVGALLDGADIG 1zvpA 86 :LTAAFATKLAEHGIS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2007 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=2007 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)L67 because last residue in template chain is (1zvpA)Q131 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILE 1zvpA 7 :LELLLQSMSPELMAGDYVFCTVNGALSDYLSLEPIATF T0349 39 :GSLGVIPRR 1zvpA 85 :GLTAAFATK T0349 48 :VLVHEDDLAGARRLLTDAG 1zvpA 112 :IFVQKEKAQQALQALGEFA Number of specific fragments extracted= 3 number of extra gaps= 0 total=2010 Number of alignments=587 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)L67 because last residue in template chain is (1zvpA)Q131 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILE 1zvpA 7 :LELLLQSMSPELMAGDYVFCTVNGALSDYLSLEPIATF T0349 39 :GSLG 1zvpA 64 :LESS T0349 43 :VIPR 1zvpA 70 :FSLI T0349 47 :RVLVHEDDLAGARRLLTDAG 1zvpA 111 :HIFVQKEKAQQALQALGEFA Number of specific fragments extracted= 4 number of extra gaps= 0 total=2014 Number of alignments=588 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 48 :VLVHEDDLAGARRLLTDA 1zvpA 112 :IFVQKEKAQQALQALGEF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2015 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 48 :VLVHEDDLAGARRLLTD 1zvpA 112 :IFVQKEKAQQALQALGE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2016 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 1 :MRELLRTNDAVLLSAVGALLD 1zvpA 14 :MSPELMAGDYVFCTVNGALSD Number of specific fragments extracted= 1 number of extra gaps= 0 total=2017 Number of alignments=589 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 8 :NDAVLLSAVGALLDG 1zvpA 21 :GDYVFCTVNGALSDY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2018 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)E3 because first residue in template chain is (1zvpA)S2 T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLV 1zvpA 3 :GIKSLELLLQSMSPELMAGDYVFCTV T0349 34 :MSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zvpA 29 :NGALSDYLSLEPIATFREPEGLTLVLEAEKAQQAGLESSALF Number of specific fragments extracted= 2 number of extra gaps= 0 total=2020 Number of alignments=590 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)E3 because first residue in template chain is (1zvpA)S2 T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVLDQNMS 1zvpA 3 :GIKSLELLLQSMSPELMAGDYVFCTVNGALSD T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDAGLAHEL 1zvpA 35 :YLSLEPIATFREPEGLTLVLEAEKAQQAGLES Number of specific fragments extracted= 2 number of extra gaps= 0 total=2022 Number of alignments=591 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)D74 because last residue in template chain is (1zvpA)Q131 T0349 2 :RELLR 1zvpA 7 :LELLL T0349 7 :T 1zvpA 13 :S T0349 12 :LLSAVGALLDGADIGHLVL 1zvpA 86 :LTAAFATKLAEHGISANVI T0349 38 :E 1zvpA 105 :A T0349 42 :GVIPRRVLVHEDDLAGARRLLTD 1zvpA 106 :GYYHDHIFVQKEKAQQALQALGE T0349 67 :LA 1zvpA 129 :FA Number of specific fragments extracted= 6 number of extra gaps= 0 total=2028 Number of alignments=592 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)D74 because last residue in template chain is (1zvpA)Q131 T0349 2 :RELLRTN 1zvpA 7 :LELLLQS T0349 12 :LLSAVGALLDGADIGH 1zvpA 86 :LTAAFATKLAEHGISA T0349 35 :SILEG 1zvpA 102 :NVIAG T0349 43 :VIPRRVLVHEDDLAGARRLLTD 1zvpA 107 :YYHDHIFVQKEKAQQALQALGE T0349 67 :LA 1zvpA 129 :FA Number of specific fragments extracted= 5 number of extra gaps= 0 total=2033 Number of alignments=593 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLTD 1zvpA 106 :GYYHDHIFVQKEKAQQALQALGE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2034 Number of alignments=594 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLT 1zvpA 106 :GYYHDHIFVQKEKAQQALQALG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2035 Number of alignments=595 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 14 :SAVGALLDGADIGHLVL 1zvpA 88 :AAFATKLAEHGISANVI T0349 38 :E 1zvpA 105 :A T0349 42 :GVIPRRVLVHEDDLAGARRLLTD 1zvpA 106 :GYYHDHIFVQKEKAQQALQALGE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2038 Number of alignments=596 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 15 :AVGALLDGADIGH 1zvpA 89 :AFATKLAEHGISA T0349 35 :SILEG 1zvpA 102 :NVIAG T0349 43 :VIPRRVLVHEDDLAGARRLLTD 1zvpA 107 :YYHDHIFVQKEKAQQALQALGE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2041 Number of alignments=597 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)E3 because first residue in template chain is (1zvpA)S2 T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLV 1zvpA 3 :GIKSLELLLQSMSPELMAGDYVFCTV T0349 34 :MSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zvpA 29 :NGALSDYLSLEPIATFREPEGLTLVLEAEKAQQAGLESSALF Number of specific fragments extracted= 2 number of extra gaps= 0 total=2043 Number of alignments=598 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)E3 because first residue in template chain is (1zvpA)S2 T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVLDQNMS 1zvpA 3 :GIKSLELLLQSMSPELMAGDYVFCTVNGALSD T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDAGLAHEL 1zvpA 35 :YLSLEPIATFREPEGLTLVLEAEKAQQAGLES Number of specific fragments extracted= 2 number of extra gaps= 0 total=2045 Number of alignments=599 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)E3 because first residue in template chain is (1zvpA)S2 Warning: unaligning (T0349)H69 because last residue in template chain is (1zvpA)Q131 T0349 4 :LLRTNDAVL 1zvpA 3 :GIKSLELLL T0349 14 :SAVGALLDGADIGHLVL 1zvpA 88 :AAFATKLAEHGISANVI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTD 1zvpA 105 :AGYYHDHIFVQKEKAQQALQALGE T0349 67 :LA 1zvpA 129 :FA Number of specific fragments extracted= 4 number of extra gaps= 0 total=2049 Number of alignments=600 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)H69 because last residue in template chain is (1zvpA)Q131 T0349 4 :LLRT 1zvpA 10 :LLQS T0349 9 :DAV 1zvpA 57 :EKA T0349 12 :LLSAVGALLDGADIGHLVL 1zvpA 86 :LTAAFATKLAEHGISANVI T0349 38 :E 1zvpA 105 :A T0349 42 :GVIPRRVLVHEDDLAGARRLLT 1zvpA 106 :GYYHDHIFVQKEKAQQALQALG T0349 66 :GLA 1zvpA 128 :EFA Number of specific fragments extracted= 6 number of extra gaps= 0 total=2055 Number of alignments=601 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLTD 1zvpA 106 :GYYHDHIFVQKEKAQQALQALGE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2056 Number of alignments=602 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLT 1zvpA 106 :GYYHDHIFVQKEKAQQALQALG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2057 Number of alignments=603 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 14 :SAVGALLDGADIGHLVL 1zvpA 88 :AAFATKLAEHGISANVI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTD 1zvpA 105 :AGYYHDHIFVQKEKAQQALQALGE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2059 Number of alignments=604 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 13 :LSAVGALLDGADIGHLVL 1zvpA 87 :TAAFATKLAEHGISANVI T0349 38 :E 1zvpA 105 :A T0349 42 :GVIPRRVLVHEDDLAGARRLLT 1zvpA 106 :GYYHDHIFVQKEKAQQALQALG Number of specific fragments extracted= 3 number of extra gaps= 0 total=2062 Number of alignments=605 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)E3 because first residue in template chain is (1zvpA)S2 Warning: unaligning (T0349)A68 because of BadResidue code BAD_PEPTIDE in next template residue (1zvpA)S79 Warning: unaligning (T0349)H69 because of BadResidue code BAD_PEPTIDE at template residue (1zvpA)S79 Warning: unaligning (T0349)R72 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1zvpA)E82 T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVLDQNMSIL 1zvpA 3 :GIKSLELLLQSMSPELMAGDYVFCTVNGALSDYL T0349 38 :EGSLGVIPRRVLVHEDDLAGARRLLTDAGL 1zvpA 48 :EGLTLVLEAEKAQQAGLESSALFSLITLTV T0349 73 :SDD 1zvpA 83 :AVG Number of specific fragments extracted= 3 number of extra gaps= 1 total=2065 Number of alignments=606 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)E3 because first residue in template chain is (1zvpA)S2 T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVLDQNMSIL 1zvpA 3 :GIKSLELLLQSMSPELMAGDYVFCTVNGALSDYL T0349 38 :EGSLGVIPR 1zvpA 48 :EGLTLVLEA T0349 53 :DDLAGA 1zvpA 57 :EKAQQA T0349 62 :LTDA 1zvpA 63 :GLES Number of specific fragments extracted= 4 number of extra gaps= 0 total=2069 Number of alignments=607 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)D74 because last residue in template chain is (1zvpA)Q131 T0349 12 :LLSAVGALLDGADIGH 1zvpA 86 :LTAAFATKLAEHGISA T0349 35 :SIL 1zvpA 102 :NVI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTD 1zvpA 105 :AGYYHDHIFVQKEKAQQALQALGE T0349 67 :LA 1zvpA 129 :FA Number of specific fragments extracted= 4 number of extra gaps= 0 total=2073 Number of alignments=608 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set Warning: unaligning (T0349)H69 because last residue in template chain is (1zvpA)Q131 T0349 3 :ELLRTND 1zvpA 24 :VFCTVNG T0349 12 :LLSAVGALLDGADIG 1zvpA 86 :LTAAFATKLAEHGIS T0349 34 :MSILE 1zvpA 101 :ANVIA T0349 42 :GVIPRRVLVHEDDLAGARRLLT 1zvpA 106 :GYYHDHIFVQKEKAQQALQALG T0349 66 :GLA 1zvpA 128 :EFA Number of specific fragments extracted= 5 number of extra gaps= 0 total=2078 Number of alignments=609 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLTD 1zvpA 106 :GYYHDHIFVQKEKAQQALQALGE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2079 Number of alignments=610 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 42 :GVIPRRVLVHEDDLAGARRLLT 1zvpA 106 :GYYHDHIFVQKEKAQQALQALG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2080 Number of alignments=611 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 16 :VGALLDGADIGH 1zvpA 90 :FATKLAEHGISA T0349 35 :SIL 1zvpA 102 :NVI T0349 41 :LGVIPRRVLVHEDDLAGARRLLTD 1zvpA 105 :AGYYHDHIFVQKEKAQQALQALGE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2083 Number of alignments=612 # 1zvpA read from 1zvpA/merged-a2m # found chain 1zvpA in template set T0349 14 :SAVGALLDGADIG 1zvpA 88 :AAFATKLAEHGIS T0349 34 :MSILEG 1zvpA 101 :ANVIAG T0349 43 :VIPRRVLVHEDDLAGARRLLT 1zvpA 107 :YYHDHIFVQKEKAQQALQALG Number of specific fragments extracted= 3 number of extra gaps= 0 total=2086 Number of alignments=613 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1v6sA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1v6sA/merged-a2m # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLRTNDAVLLSA 1v6sA 42 :LRHLLAGGASLVLLS T0349 16 :VGALLDGADIGHLVLDQNM 1v6sA 96 :ARREAEALRPGEVLLLENV T0349 35 :SILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1v6sA 233 :SLVEEDRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2089 Number of alignments=614 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLR 1v6sA 1 :MRTLLD T0349 7 :T 1v6sA 48 :G T0349 8 :NDAVLLSAVGA 1v6sA 50 :ASLVLLSHLGR T0349 19 :LLDGADIGHLVLDQNMSILEGS 1v6sA 99 :EAEALRPGEVLLLENVRFEPGE T0349 41 :LG 1v6sA 199 :IG T0349 43 :VIPRRVLVHEDDLA 1v6sA 258 :YLPEDVVAAERIEA T0349 57 :GARRLLTDAGLA 1v6sA 284 :PVPYMGLDIGPK T0349 69 :HE 1v6sA 361 :ER T0349 71 :LRSDD 1v6sA 386 :EVLEG Number of specific fragments extracted= 9 number of extra gaps= 0 total=2098 Number of alignments=615 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 22 :GADIGHLVLDQNMSILEGSLGVI 1v6sA 289 :GLDIGPKTREAFARALEGARTVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2099 Number of alignments=616 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 23 :ADIGHLVLDQNMSIL 1v6sA 290 :LDIGPKTREAFARAL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2100 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQNM 1v6sA 81 :LPEARFAPFPPGSEEARREAEALRPGEVLLLENV T0349 35 :SILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1v6sA 233 :SLVEEDRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2102 Number of alignments=617 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLR 1v6sA 1 :MRTLLD T0349 7 :TND 1v6sA 48 :GGA T0349 10 :AVLL 1v6sA 52 :LVLL T0349 14 :SAVGALLDGADIGHLVLDQNMSILEGSL 1v6sA 94 :EEARREAEALRPGEVLLLENVRFEPGEE T0349 42 :GVIPRRVLVHEDDLAGARR 1v6sA 257 :VYLPEDVVAAERIEAGVET T0349 61 :LLTDAGLA 1v6sA 288 :MGLDIGPK T0349 69 :H 1v6sA 333 :Q T0349 70 :E 1v6sA 337 :A T0349 71 :LR 1v6sA 388 :LE Number of specific fragments extracted= 9 number of extra gaps= 0 total=2111 Number of alignments=618 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 39 :GSLGVIPRRVLVHED 1v6sA 5 :LDLDPKGKRVLVRVD Number of specific fragments extracted= 1 number of extra gaps= 0 total=2112 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 27 :HLVLDQNMSI 1v6sA 107 :EVLLLENVRF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2113 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLRTNDAVLLSA 1v6sA 42 :LRHLLAGGASLVLLS T0349 16 :VGALLDGADIGHLVLDQNMSILEG 1v6sA 96 :ARREAEALRPGEVLLLENVRFEPG T0349 40 :SLGVIPRRVLVHEDDLAGARRLL 1v6sA 225 :ALGGEVGRSLVEEDRLDLAKDLL T0349 63 :TDAGLAHELRSDD 1v6sA 261 :EDVVAAERIEAGV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2117 Number of alignments=619 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MREL 1v6sA 4 :LLDL T0349 5 :LRTND 1v6sA 46 :LAGGA T0349 10 :AVLLSAVGALLD 1v6sA 52 :LVLLSHLGRPKG T0349 22 :GADIGHLVLDQNMSILEGS 1v6sA 102 :ALRPGEVLLLENVRFEPGE T0349 41 :LGV 1v6sA 199 :IGV T0349 44 :IPRRVLVHEDDLAG 1v6sA 259 :LPEDVVAAERIEAG T0349 58 :ARRLLTDAGLA 1v6sA 285 :VPYMGLDIGPK T0349 69 :HELR 1v6sA 333 :QAIA T0349 73 :SDD 1v6sA 388 :LEG Number of specific fragments extracted= 9 number of extra gaps= 0 total=2126 Number of alignments=620 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 22 :GADIGHLVLDQNMSILEGSLGVI 1v6sA 289 :GLDIGPKTREAFARALEGARTVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2127 Number of alignments=621 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 24 :DIGHLVLDQNMSIL 1v6sA 291 :DIGPKTREAFARAL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2128 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 24 :DIGHLVLDQNMSILEGSLGVI 1v6sA 325 :DEGTLAVGQAIAALEGAFTVV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2129 Number of alignments=622 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set Number of specific fragments extracted= 0 number of extra gaps= 0 total=2129 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLRTNDA 1v6sA 1 :MRTLLDLDPK T0349 11 :VLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLA 1v6sA 20 :YNVPVQDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPD T0349 57 :GARRLLTDAGLAHELRSDD 1v6sA 76 :ALRAHLPEARFAPFPPGSE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2132 Number of alignments=623 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLRTNDA 1v6sA 1 :MRTLLDLDPK T0349 11 :VL 1v6sA 14 :VL T0349 13 :LSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLA 1v6sA 22 :VPVQDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPD T0349 57 :GARRLLTDAGLAHELRSD 1v6sA 76 :ALRAHLPEARFAPFPPGS Number of specific fragments extracted= 4 number of extra gaps= 0 total=2136 Number of alignments=624 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELL 1v6sA 1 :MRTLL T0349 7 :TNDAVLLSAVGALLDGA 1v6sA 33 :TRILESLPTLRHLLAGG T0349 26 :GHLVLDQNMS 1v6sA 136 :EAFVLDAFGS T0349 36 :ILEGSLGVIP 1v6sA 152 :SVVGVARLLP T0349 47 :RV 1v6sA 211 :RL T0349 49 :LVHEDDLAGARRLLTDAG 1v6sA 234 :LVEEDRLDLAKDLLGRAE Number of specific fragments extracted= 6 number of extra gaps= 0 total=2142 Number of alignments=625 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :M 1v6sA 1 :M T0349 15 :AVGALLDG 1v6sA 41 :TLRHLLAG T0349 25 :IGHLVLD 1v6sA 135 :GEAFVLD T0349 32 :QNMSILEGSLGVIP 1v6sA 148 :RAHASVVGVARLLP T0349 46 :RRVL 1v6sA 210 :DRLL T0349 50 :VHEDDLAGARRLLTDA 1v6sA 235 :VEEDRLDLAKDLLGRA T0349 66 :GL 1v6sA 254 :GV T0349 69 :HELRSDD 1v6sA 267 :ERIEAGV Number of specific fragments extracted= 8 number of extra gaps= 0 total=2150 Number of alignments=626 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 47 :RVLVHEDDLAGARRLLTDAG 1v6sA 232 :RSLVEEDRLDLAKDLLGRAE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2151 Number of alignments=627 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 33 :NMSILEGSLG 1v6sA 222 :FLKALGGEVG T0349 47 :RVLVHEDDLAGARRLLTDAG 1v6sA 232 :RSLVEEDRLDLAKDLLGRAE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2153 Number of alignments=628 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 13 :LSAVGALLD 1v6sA 199 :IGVIESLLP T0349 24 :DIGHLVLDQNMS 1v6sA 208 :RIDRLLIGGAMA T0349 36 :ILEGSLG 1v6sA 225 :ALGGEVG T0349 47 :RVLVHEDDLAGARRLLTDAG 1v6sA 232 :RSLVEEDRLDLAKDLLGRAE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2157 Number of alignments=629 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 13 :LSAVGALLD 1v6sA 199 :IGVIESLLP T0349 24 :DIGHLVLDQNMS 1v6sA 208 :RIDRLLIGGAMA T0349 36 :ILEGSLGVI 1v6sA 225 :ALGGEVGRS T0349 49 :LVHEDDLAGARRLLTDA 1v6sA 234 :LVEEDRLDLAKDLLGRA Number of specific fragments extracted= 4 number of extra gaps= 0 total=2161 Number of alignments=630 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLRTNDA 1v6sA 1 :MRTLLDLDPK T0349 11 :VLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLA 1v6sA 20 :YNVPVQDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPD T0349 57 :GARRLLTDAGLAHELRSDD 1v6sA 76 :ALRAHLPEARFAPFPPGSE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2164 Number of alignments=631 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLRTNDA 1v6sA 1 :MRTLLDLDPK T0349 11 :VL 1v6sA 14 :VL T0349 13 :LSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLA 1v6sA 22 :VPVQDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPD T0349 57 :GARRLLTDAGLAHELRSD 1v6sA 76 :ALRAHLPEARFAPFPPGS Number of specific fragments extracted= 4 number of extra gaps= 0 total=2168 Number of alignments=632 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELL 1v6sA 1 :MRTLL T0349 10 :AVLLSAVGALLDGA 1v6sA 36 :LESLPTLRHLLAGG T0349 26 :GHLVLD 1v6sA 136 :EAFVLD T0349 36 :ILEGSLGVIP 1v6sA 152 :SVVGVARLLP T0349 47 :RV 1v6sA 212 :LL T0349 49 :LVHEDDLAGARRLLTDAGL 1v6sA 234 :LVEEDRLDLAKDLLGRAEA Number of specific fragments extracted= 6 number of extra gaps= 0 total=2174 Number of alignments=633 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MR 1v6sA 1 :MR T0349 4 :LLR 1v6sA 15 :LVR T0349 8 :NDAVLLS 1v6sA 31 :DETRILE T0349 15 :AVGALLDG 1v6sA 41 :TLRHLLAG T0349 26 :GHLVLD 1v6sA 136 :EAFVLD T0349 32 :QNMSILEGSLGVIP 1v6sA 148 :RAHASVVGVARLLP T0349 46 :RRVL 1v6sA 210 :DRLL T0349 50 :VHEDDLAGARRLLTDA 1v6sA 235 :VEEDRLDLAKDLLGRA T0349 66 :GLA 1v6sA 254 :GVR T0349 69 :HELRSDD 1v6sA 267 :ERIEAGV Number of specific fragments extracted= 10 number of extra gaps= 0 total=2184 Number of alignments=634 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 47 :RVLVHEDDLAGARRLLTDAG 1v6sA 232 :RSLVEEDRLDLAKDLLGRAE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2185 Number of alignments=635 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 33 :NMSILEGSLG 1v6sA 222 :FLKALGGEVG T0349 47 :RVLVHEDDLAGARRLLTDAG 1v6sA 232 :RSLVEEDRLDLAKDLLGRAE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2187 Number of alignments=636 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 13 :LSAVGALLD 1v6sA 199 :IGVIESLLP T0349 24 :DIGHLVLDQNMS 1v6sA 208 :RIDRLLIGGAMA T0349 36 :ILEGSLG 1v6sA 225 :ALGGEVG T0349 47 :RVLVHEDDLAGARRLLTDAG 1v6sA 232 :RSLVEEDRLDLAKDLLGRAE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2191 Number of alignments=637 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 13 :LSAVGALL 1v6sA 199 :IGVIESLL T0349 23 :ADIGHLVLDQNMS 1v6sA 207 :PRIDRLLIGGAMA T0349 36 :ILEGSLGVI 1v6sA 225 :ALGGEVGRS T0349 49 :LVHEDDLAGARRLLTDA 1v6sA 234 :LVEEDRLDLAKDLLGRA Number of specific fragments extracted= 4 number of extra gaps= 0 total=2195 Number of alignments=638 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLRTNDAVLLSAVG 1v6sA 1 :MRTLLDLDPKGKRVLVR T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLA 1v6sA 27 :GKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPD T0349 57 :GARRLLTDAGLAHELRSDD 1v6sA 76 :ALRAHLPEARFAPFPPGSE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2198 Number of alignments=639 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELLRTNDA 1v6sA 1 :MRTLLDLDPK T0349 11 :VL 1v6sA 14 :VL T0349 13 :LSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDL 1v6sA 22 :VPVQDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGP T0349 74 :D 1v6sA 65 :D Number of specific fragments extracted= 4 number of extra gaps= 0 total=2202 Number of alignments=640 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MRELL 1v6sA 1 :MRTLL T0349 10 :AVLLSAVGALLDG 1v6sA 36 :LESLPTLRHLLAG T0349 24 :DIGHLVLD 1v6sA 49 :GASLVLLS T0349 33 :NMSILEGSLG 1v6sA 57 :HLGRPKGPDP T0349 43 :VIPRRVLVH 1v6sA 80 :HLPEARFAP T0349 52 :EDDLAGARRLLT 1v6sA 90 :PPGSEEARREAE T0349 66 :G 1v6sA 102 :A T0349 71 :LRSDD 1v6sA 103 :LRPGE Number of specific fragments extracted= 8 number of extra gaps= 0 total=2210 Number of alignments=641 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 1 :MREL 1v6sA 1 :MRTL T0349 6 :RTNDAVLLSAVGALLD 1v6sA 28 :KVQDETRILESLPTLR T0349 22 :GADIGHLVL 1v6sA 47 :AGGASLVLL T0349 31 :DQNMSI 1v6sA 65 :DPKYSL T0349 38 :EGSLGVI 1v6sA 105 :PGEVLLL T0349 47 :RVLV 1v6sA 211 :RLLI T0349 51 :HEDDLAGARRLLTDA 1v6sA 236 :EEDRLDLAKDLLGRA T0349 66 :GLAHELRS 1v6sA 254 :GVRVYLPE Number of specific fragments extracted= 8 number of extra gaps= 0 total=2218 Number of alignments=642 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 47 :RVLVHEDDLAGARRLLTDAG 1v6sA 232 :RSLVEEDRLDLAKDLLGRAE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2219 Number of alignments=643 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 36 :ILEGSLG 1v6sA 225 :ALGGEVG T0349 47 :RVLVHEDDLAGARRLLTD 1v6sA 232 :RSLVEEDRLDLAKDLLGR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2221 Number of alignments=644 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 13 :LSAVGALL 1v6sA 199 :IGVIESLL T0349 23 :ADIGHLVLDQNMS 1v6sA 207 :PRIDRLLIGGAMA T0349 36 :ILEGSLG 1v6sA 225 :ALGGEVG T0349 47 :RVLVHEDDLAGARRLLTDA 1v6sA 232 :RSLVEEDRLDLAKDLLGRA Number of specific fragments extracted= 4 number of extra gaps= 0 total=2225 Number of alignments=645 # 1v6sA read from 1v6sA/merged-a2m # found chain 1v6sA in training set T0349 13 :LSAVGALLD 1v6sA 199 :IGVIESLLP T0349 24 :DIGHLVLDQNMS 1v6sA 208 :RIDRLLIGGAMA T0349 36 :ILEGSLG 1v6sA 225 :ALGGEVG T0349 47 :RVLVHEDDLAGARRLLTDA 1v6sA 232 :RSLVEEDRLDLAKDLLGRA Number of specific fragments extracted= 4 number of extra gaps= 0 total=2229 Number of alignments=646 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1hdoA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1hdoA/merged-a2m # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 T0349 2 :RELLRTNDAVLLSA 1hdoA 62 :DKTVAGQDAVIVLL T0349 16 :VGALLDGADIGHLVLDQNMSILEGSL 1hdoA 94 :IVAAMKAHGVDKVVACTSAFLLWDPT T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHEL 1hdoA 170 :RGPSRVISKHDLGHFMLRCLTTDEYDGH Number of specific fragments extracted= 3 number of extra gaps= 1 total=2232 Number of alignments=647 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 T0349 2 :RELLRTNDAVLLSA 1hdoA 21 :AQAVQAGYEVTVLV T0349 16 :VGALLDG 1hdoA 61 :VDKTVAG T0349 23 :ADIGHLVLDQNMS 1hdoA 101 :HGVDKVVACTSAF T0349 36 :ILEGSLGV 1hdoA 123 :PRLQAVTD T0349 44 :IPRRVLVHEDDLAGARRLLTDAGLAHEL 1hdoA 170 :RGPSRVISKHDLGHFMLRCLTTDEYDGH Number of specific fragments extracted= 5 number of extra gaps= 0 total=2237 Number of alignments=648 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set T0349 45 :PRRVLVHEDDLAGARRLLTDAG 1hdoA 171 :GPSRVISKHDLGHFMLRCLTTD Number of specific fragments extracted= 1 number of extra gaps= 0 total=2238 Number of alignments=649 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 171 :GPSRVISKHDLGHFMLRCLT Number of specific fragments extracted= 1 number of extra gaps= 0 total=2239 Number of alignments=650 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 T0349 2 :RELLRTNDAVLLSA 1hdoA 62 :DKTVAGQDAVIVLL T0349 16 :VGALLDGADIGHLVLDQNMSILEGSL 1hdoA 94 :IVAAMKAHGVDKVVACTSAFLLWDPT T0349 44 :I 1hdoA 122 :P T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1hdoA 171 :GPSRVISKHDLGHFMLRCLTTDEYDG Number of specific fragments extracted= 4 number of extra gaps= 1 total=2243 Number of alignments=651 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)A2 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 T0349 3 :ELLRTNDAVLL 1hdoA 22 :QAVQAGYEVTV T0349 14 :SAVGALLD 1hdoA 59 :ADVDKTVA T0349 22 :GADIGHLVLDQNMSILEGSL 1hdoA 100 :AHGVDKVVACTSAFLLWDPT T0349 44 :I 1hdoA 122 :P T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHE 1hdoA 171 :GPSRVISKHDLGHFMLRCLTTDEYDG Number of specific fragments extracted= 5 number of extra gaps= 1 total=2248 Number of alignments=652 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set T0349 33 :NMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHE 1hdoA 159 :LTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2249 Number of alignments=653 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set T0349 32 :QNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAG 1hdoA 158 :PLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTD Number of specific fragments extracted= 1 number of extra gaps= 0 total=2250 Number of alignments=654 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set T0349 1 :MRELLRTNDAVLLSAVGA 1hdoA 61 :VDKTVAGQDAVIVLLGTR T0349 21 :DGADIGHLVLDQNMSILE 1hdoA 79 :NDLSPTTVMSEGARNIVA T0349 39 :GSLGVIP 1hdoA 113 :FLLWDPT T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1hdoA 172 :PSRVISKHDLGHFMLRCLTTDEYDGHSTYP Number of specific fragments extracted= 4 number of extra gaps= 0 total=2254 Number of alignments=655 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 T0349 1 :M 1hdoA 4 :K T0349 2 :RELLRTNDAVLLSAVGA 1hdoA 62 :DKTVAGQDAVIVLLGTR T0349 19 :LLDGADIGHLVLDQNMSILE 1hdoA 97 :AMKAHGVDKVVACTSAFLLW T0349 40 :SLG 1hdoA 117 :DPT T0349 45 :PRRVLVHEDDLAGARRLLTDAGLA 1hdoA 171 :GPSRVISKHDLGHFMLRCLTTDEY T0349 69 :HELRSDD 1hdoA 199 :TYPSHQY Number of specific fragments extracted= 6 number of extra gaps= 1 total=2260 Number of alignments=656 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set T0349 45 :PRRVLVHEDDLAGARRLL 1hdoA 171 :GPSRVISKHDLGHFMLRC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2261 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set T0349 46 :RRVLVHEDDLAGARRLL 1hdoA 172 :PSRVISKHDLGHFMLRC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2262 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 1 :M 1hdoA 4 :K T0349 2 :RELLRTNDAVLLS 1hdoA 12 :TGQTGLTTLAQAV T0349 15 :AVGALLD 1hdoA 60 :DVDKTVA T0349 24 :DIGHLVLDQNM 1hdoA 67 :GQDAVIVLLGT T0349 35 :SILEGSLGVIP 1hdoA 86 :VMSEGARNIVA T0349 46 :R 1hdoA 103 :V T0349 47 :RVLVHE 1hdoA 105 :KVVACT T0349 54 :D 1hdoA 111 :S T0349 55 :LAGARRLLTD 1hdoA 132 :HIRMHKVLRE T0349 67 :L 1hdoA 144 :L T0349 68 :AHELRSD 1hdoA 146 :YVAVMPP Number of specific fragments extracted= 11 number of extra gaps= 1 total=2273 Number of alignments=657 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 T0349 2 :RELLRTNDAVLLSAVG 1hdoA 62 :DKTVAGQDAVIVLLGT T0349 18 :ALLDGADIGHLVLDQNM 1hdoA 86 :VMSEGARNIVAAMKAHG T0349 39 :GSLGVIP 1hdoA 104 :DKVVACT T0349 46 :RRVLVHE 1hdoA 124 :RLQAVTD T0349 54 :DLAGARRLLTD 1hdoA 131 :DHIRMHKVLRE Number of specific fragments extracted= 5 number of extra gaps= 1 total=2278 Number of alignments=658 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set T0349 16 :VGALLDGADIGHLVLDQNMSIL 1hdoA 52 :VGDVLQAADVDKTVAGQDAVIV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2279 Number of alignments=659 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set T0349 17 :GALLDGADIGHLVLDQNMSI 1hdoA 53 :GDVLQAADVDKTVAGQDAVI Number of specific fragments extracted= 1 number of extra gaps= 0 total=2280 Number of alignments=660 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 T0349 2 :RELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEG 1hdoA 7 :AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG T0349 51 :HEDDLAGARRLLTDAGLAHELRSDD 1hdoA 45 :PRPAHVVVGDVLQAADVDKTVAGQD Number of specific fragments extracted= 2 number of extra gaps= 0 total=2282 Number of alignments=661 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 4 :LLRTNDA 1hdoA 33 :LVRDSSR T0349 15 :AVGALLDGADIGHLVLDQNMS 1hdoA 51 :VVGDVLQAADVDKTVAGQDAV T0349 36 :IL 1hdoA 73 :VL T0349 38 :EGSLGV 1hdoA 89 :EGARNI T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LAHELR 1hdoA 144 :LKYVAV Number of specific fragments extracted= 6 number of extra gaps= 2 total=2288 Number of alignments=662 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 T0349 5 :LRTNDAVLLSAVGALLD 1hdoA 9 :FGATGQTGLTTLAQAVQ T0349 23 :ADIGHLVLDQNMSILEG 1hdoA 26 :AGYEVTVLVRDSSRLPS T0349 41 :LGVIPRRVLVHE 1hdoA 43 :EGPRPAHVVVGD T0349 54 :DLAGARRLLTDAG 1hdoA 57 :QAADVDKTVAGQD T0349 68 :AHELRS 1hdoA 76 :GTRNDL Number of specific fragments extracted= 5 number of extra gaps= 0 total=2293 Number of alignments=663 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 T0349 4 :LLRTNDAVLLSAVGALLD 1hdoA 8 :IFGATGQTGLTTLAQAVQ T0349 23 :ADIGHLVLDQNMSILEGS 1hdoA 26 :AGYEVTVLVRDSSRLPSE T0349 42 :GVIPRRVLVH 1hdoA 44 :GPRPAHVVVG T0349 52 :EDDLAGA 1hdoA 58 :AADVDKT T0349 59 :RRLLTDAGLA 1hdoA 95 :VAAMKAHGVD T0349 69 :HELRSDD 1hdoA 114 :LLWDPTK Number of specific fragments extracted= 6 number of extra gaps= 0 total=2299 Number of alignments=664 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LAH 1hdoA 144 :LKY Number of specific fragments extracted= 2 number of extra gaps= 2 total=2301 Number of alignments=665 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LAH 1hdoA 144 :LKY Number of specific fragments extracted= 2 number of extra gaps= 2 total=2303 Number of alignments=666 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 14 :SAVGALLDGADIGHLVLDQNMSILEGSL 1hdoA 92 :RNIVAAMKAHGVDKVVACTSAFLLWDPT T0349 44 :IPR 1hdoA 122 :PPR T0349 48 :VLVHEDDLAGARRLLTD 1hdoA 125 :LQAVTDDHIRMHKVLRE T0349 67 :L 1hdoA 144 :L Number of specific fragments extracted= 4 number of extra gaps= 2 total=2307 Number of alignments=667 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)V50 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 11 :VLLSAVGALLDGADIGHLVLDQNMSILEGSL 1hdoA 89 :EGARNIVAAMKAHGVDKVVACTSAFLLWDPT T0349 51 :HEDDLA 1hdoA 122 :PPRLQA T0349 57 :GARRLLTD 1hdoA 134 :RMHKVLRE T0349 67 :L 1hdoA 144 :L Number of specific fragments extracted= 4 number of extra gaps= 2 total=2311 Number of alignments=668 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 T0349 2 :RELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEG 1hdoA 7 :AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG T0349 51 :HEDDLAGARRLLTDAGLAHELRSDD 1hdoA 45 :PRPAHVVVGDVLQAADVDKTVAGQD Number of specific fragments extracted= 2 number of extra gaps= 0 total=2313 Number of alignments=669 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 4 :LLRTNDA 1hdoA 33 :LVRDSSR T0349 15 :AVGALLDGADIGHLVLDQNMS 1hdoA 51 :VVGDVLQAADVDKTVAGQDAV T0349 36 :IL 1hdoA 73 :VL T0349 38 :EGSLGV 1hdoA 89 :EGARNI T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LAHELR 1hdoA 144 :LKYVAV Number of specific fragments extracted= 6 number of extra gaps= 2 total=2319 Number of alignments=670 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)A2 T0349 4 :LLRTNDAVLLSAVGALLD 1hdoA 8 :IFGATGQTGLTTLAQAVQ T0349 23 :ADIGHLVLDQNMSILEG 1hdoA 26 :AGYEVTVLVRDSSRLPS T0349 41 :LGVIPRRVLVH 1hdoA 43 :EGPRPAHVVVG T0349 54 :DLAGARRLLTDAG 1hdoA 57 :QAADVDKTVAGQD T0349 67 :LAHELRS 1hdoA 77 :TRNDLSP Number of specific fragments extracted= 5 number of extra gaps= 0 total=2324 Number of alignments=671 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 T0349 3 :ELLRTNDAVLLSAVGALLD 1hdoA 7 :AIFGATGQTGLTTLAQAVQ T0349 23 :ADIGHLVLDQNMSILEGS 1hdoA 26 :AGYEVTVLVRDSSRLPSE T0349 42 :GVIPRRVLVH 1hdoA 44 :GPRPAHVVVG T0349 52 :EDDLAGA 1hdoA 58 :AADVDKT T0349 59 :RRLLTDAGLA 1hdoA 95 :VAAMKAHGVD T0349 69 :HELRSDD 1hdoA 114 :LLWDPTK Number of specific fragments extracted= 6 number of extra gaps= 0 total=2330 Number of alignments=672 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LAH 1hdoA 144 :LKY Number of specific fragments extracted= 2 number of extra gaps= 2 total=2332 Number of alignments=673 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LAH 1hdoA 144 :LKY Number of specific fragments extracted= 2 number of extra gaps= 2 total=2334 Number of alignments=674 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 14 :SAVGALLDGADIGHLVLDQNMSILEGSL 1hdoA 92 :RNIVAAMKAHGVDKVVACTSAFLLWDPT T0349 44 :IP 1hdoA 122 :PP T0349 47 :RVLVHEDDLAGARRLLTD 1hdoA 124 :RLQAVTDDHIRMHKVLRE T0349 67 :L 1hdoA 144 :L Number of specific fragments extracted= 4 number of extra gaps= 2 total=2338 Number of alignments=675 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set T0349 4 :LLRTNDAVLLSAVGALLD 1hdoA 8 :IFGATGQTGLTTLAQAVQ T0349 23 :ADIGHLVLDQNMSILEGSL 1hdoA 26 :AGYEVTVLVRDSSRLPSEG T0349 43 :VIPRRVLVHE 1hdoA 45 :PRPAHVVVGD T0349 53 :DDLAGARRLL 1hdoA 56 :LQAADVDKTV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2342 Number of alignments=676 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)A2 T0349 3 :E 1hdoA 3 :V T0349 4 :LLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGSL 1hdoA 9 :FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR T0349 45 :PRRVLVHE 1hdoA 47 :PAHVVVGD T0349 61 :LLTDAGLAHELRSDD 1hdoA 55 :VLQAADVDKTVAGQD Number of specific fragments extracted= 4 number of extra gaps= 0 total=2346 Number of alignments=677 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)A2 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 4 :LLRTNDAVL 1hdoA 33 :LVRDSSRLP T0349 15 :AVGALLDGADIGHLVLDQNMSIL 1hdoA 51 :VVGDVLQAADVDKTVAGQDAVIV T0349 38 :EGSLGV 1hdoA 89 :EGARNI T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LAHEL 1hdoA 144 :LKYVA Number of specific fragments extracted= 5 number of extra gaps= 2 total=2351 Number of alignments=678 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)A2 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 8 :NDAVL 1hdoA 68 :QDAVI T0349 13 :LSAVGALLDGADIGHLVLDQNMSILEGS 1hdoA 91 :ARNIVAAMKAHGVDKVVACTSAFLLWDP T0349 42 :G 1hdoA 119 :T T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LAH 1hdoA 144 :LKY T0349 70 :ELRSDD 1hdoA 153 :HIGDQP Number of specific fragments extracted= 6 number of extra gaps= 2 total=2357 Number of alignments=679 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)A2 Warning: unaligning (T0349)R2 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)A2 T0349 5 :LRTNDAVLLSAVGALLD 1hdoA 9 :FGATGQTGLTTLAQAVQ T0349 23 :ADIGHLVLDQNMSILEGSLGVIPR 1hdoA 26 :AGYEVTVLVRDSSRLPSEGPRPAH T0349 48 :VLV 1hdoA 50 :VVV T0349 51 :HEDDLAGA 1hdoA 57 :QAADVDKT T0349 59 :RRLLTDAGLA 1hdoA 95 :VAAMKAHGVD Number of specific fragments extracted= 5 number of extra gaps= 0 total=2362 Number of alignments=680 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LA 1hdoA 144 :LK Number of specific fragments extracted= 2 number of extra gaps= 2 total=2364 Number of alignments=681 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 20 :LDGADIGHLVLDQNMSILEGS 1hdoA 98 :MKAHGVDKVVACTSAFLLWDP T0349 42 :G 1hdoA 119 :T T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LAH 1hdoA 144 :LKY Number of specific fragments extracted= 4 number of extra gaps= 2 total=2368 Number of alignments=682 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)I44 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 13 :LSAVGALLDGADIGHLVLDQNMSILEGS 1hdoA 91 :ARNIVAAMKAHGVDKVVACTSAFLLWDP T0349 42 :G 1hdoA 119 :T T0349 45 :PRRVLVHEDDLAGARRLLTD 1hdoA 122 :PPRLQAVTDDHIRMHKVLRE T0349 67 :LAH 1hdoA 144 :LKY Number of specific fragments extracted= 4 number of extra gaps= 2 total=2372 Number of alignments=683 # 1hdoA read from 1hdoA/merged-a2m # found chain 1hdoA in training set Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)V121 Warning: unaligning (T0349)V43 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)V121 Warning: unaligning (T0349)A65 because of BadResidue code BAD_PEPTIDE in next template residue (1hdoA)G143 Warning: unaligning (T0349)G66 because of BadResidue code BAD_PEPTIDE at template residue (1hdoA)G143 T0349 12 :LLSAVGALLDGADIGHLVLDQNMSILEGSL 1hdoA 90 :GARNIVAAMKAHGVDKVVACTSAFLLWDPT T0349 44 :IPRR 1hdoA 122 :PPRL T0349 49 :LVHEDDLAGARRLLTD 1hdoA 126 :QAVTDDHIRMHKVLRE T0349 67 :LA 1hdoA 144 :LK Number of specific fragments extracted= 4 number of extra gaps= 2 total=2376 Number of alignments=684 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1dzkA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1dzkA/merged-a2m # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 3 :ELLRTNDAVLLSAVGALLDGADIGHLVL 1dzkA 18 :TSYIGSSDLEKIGENAPFQVFMRSIEFD T0349 31 :DQNMSI 1dzkA 48 :ESKVYL T0349 37 :LE 1dzkA 105 :VD T0349 39 :GSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1dzkA 113 :IMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNI Number of specific fragments extracted= 4 number of extra gaps= 0 total=2380 Number of alignments=685 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 6 :RTNDAVLLSAVGALLDGADIGHLVL 1dzkA 21 :IGSSDLEKIGENAPFQVFMRSIEFD T0349 31 :DQNMSILE 1dzkA 48 :ESKVYLNF T0349 39 :GSLG 1dzkA 81 :NYAG T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHELRS 1dzkA 117 :LLGKGTDIEDQDLEKFKEVTRENGIPEENIV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2384 Number of alignments=686 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 38 :EGSLGVIPRRVLVHEDD 1dzkA 32 :NAPFQVFMRSIEFDDKE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2385 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 38 :EGSLGVIPRRVLVH 1dzkA 32 :NAPFQVFMRSIEFD Number of specific fragments extracted= 1 number of extra gaps= 0 total=2386 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 1 :MRELLRTND 1dzkA 25 :DLEKIGENA T0349 10 :AVLLSAVGALLDGA 1dzkA 36 :QVFMRSIEFDDKES T0349 24 :DIGHLVLDQNMSIL 1dzkA 87 :KFVVSYASETALII T0349 38 :E 1dzkA 106 :D T0349 39 :GSLGVIPRRVLVHEDDLAGARRLLTDAGL 1dzkA 113 :IMTGLLGKGTDIEDQDLEKFKEVTRENGI T0349 68 :AHELRSDD 1dzkA 146 :IVNIIERD Number of specific fragments extracted= 6 number of extra gaps= 0 total=2392 Number of alignments=687 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 2 :RELLRTND 1dzkA 26 :LEKIGENA T0349 10 :AVLLSAVGA 1dzkA 48 :ESKVYLNFF T0349 19 :LLDGADIGHLVLDQNMSIL 1dzkA 82 :YAGNNKFVVSYASETALII T0349 38 :E 1dzkA 103 :I T0349 39 :GSLGVIPRRVLVHEDDLAGARRLLTDAGLAHEL 1dzkA 113 :IMTGLLGKGTDIEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1dzkA 150 :IERD Number of specific fragments extracted= 6 number of extra gaps= 0 total=2398 Number of alignments=688 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 25 :IGHLVLDQNMSILEGSLGVIPRRVLVHEDD 1dzkA 19 :SYIGSSDLEKIGENAPFQVFMRSIEFDDKE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2399 Number of alignments=689 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 33 :NMSILEGSLGVIPRRVLVHED 1dzkA 27 :EKIGENAPFQVFMRSIEFDDK Number of specific fragments extracted= 1 number of extra gaps= 0 total=2400 Number of alignments=690 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 1 :MRELLRTND 1dzkA 39 :MRSIEFDDK T0349 10 :AVLLSAVGALLDGADIGHLVLDQNMSILEGS 1dzkA 80 :VNYAGNNKFVVSYASETALIISNINVDEEGD T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1dzkA 115 :TGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNI Number of specific fragments extracted= 3 number of extra gaps= 0 total=2403 Number of alignments=691 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 1 :MRELLRTND 1dzkA 39 :MRSIEFDDK T0349 10 :A 1dzkA 49 :S T0349 11 :VLLSAVGALLD 1dzkA 64 :EEFSLIGTKQE T0349 22 :GADIGHLVLDQNMSILEGS 1dzkA 92 :YASETALIISNINVDEEGD T0349 41 :LGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1dzkA 115 :TGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNI Number of specific fragments extracted= 5 number of extra gaps= 0 total=2408 Number of alignments=692 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 38 :EGSLGVIPRRVLVHED 1dzkA 32 :NAPFQVFMRSIEFDDK Number of specific fragments extracted= 1 number of extra gaps= 0 total=2409 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 38 :EGSLGVIPRRVLVHE 1dzkA 32 :NAPFQVFMRSIEFDD Number of specific fragments extracted= 1 number of extra gaps= 0 total=2410 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 17 :GALLDG 1dzkA 33 :APFQVF T0349 23 :ADIGHLVLDQNMS 1dzkA 93 :ASETALIISNINV T0349 37 :LEGSLGVIPRR 1dzkA 111 :KTIMTGLLGKG T0349 49 :LVHEDDLAGARRLLTDAGLAHEL 1dzkA 123 :DIEDQDLEKFKEVTRENGIPEEN T0349 73 :SDD 1dzkA 154 :DCP Number of specific fragments extracted= 5 number of extra gaps= 0 total=2415 Number of alignments=693 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set Number of specific fragments extracted= 0 number of extra gaps= 0 total=2415 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHE 1dzkA 116 :GLLGKGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2416 Number of alignments=694 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set Number of specific fragments extracted= 0 number of extra gaps= 0 total=2416 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set Warning: unaligning (T0349)V11 because first residue in template chain is (1dzkA)F10 T0349 12 :LLS 1dzkA 11 :ELS T0349 15 :AVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1dzkA 16 :WITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGN Number of specific fragments extracted= 2 number of extra gaps= 0 total=2418 Number of alignments=695 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set Warning: unaligning (T0349)V11 because first residue in template chain is (1dzkA)F10 T0349 12 :LLS 1dzkA 11 :ELS T0349 15 :AVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1dzkA 16 :WITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGN Number of specific fragments extracted= 2 number of extra gaps= 0 total=2420 Number of alignments=696 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 21 :DGADI 1dzkA 31 :ENAPF T0349 26 :GHLVLDQNMS 1dzkA 40 :RSIEFDDKES T0349 38 :EGSLGVIPRRV 1dzkA 108 :EGDKTIMTGLL T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1dzkA 154 :DCPA Number of specific fragments extracted= 5 number of extra gaps= 0 total=2425 Number of alignments=697 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 19 :LLDGAD 1dzkA 28 :KIGENA T0349 25 :IGHLVLDQNMS 1dzkA 39 :MRSIEFDDKES T0349 38 :EGSLGVIPR 1dzkA 60 :NGICEEFSL T0349 48 :VL 1dzkA 98 :LI T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1dzkA 154 :DCPA Number of specific fragments extracted= 6 number of extra gaps= 0 total=2431 Number of alignments=698 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHE 1dzkA 116 :GLLGKGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2432 Number of alignments=699 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 34 :MSILEGSLG 1dzkA 111 :KTIMTGLLG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHE 1dzkA 120 :KGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2434 Number of alignments=700 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 37 :LEGSLG 1dzkA 114 :MTGLLG T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=2436 Number of alignments=701 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 42 :GVIPRRVL 1dzkA 112 :TIMTGLLG T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=2438 Number of alignments=702 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set Warning: unaligning (T0349)V11 because first residue in template chain is (1dzkA)F10 T0349 12 :LLS 1dzkA 11 :ELS T0349 15 :AVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1dzkA 16 :WITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGN Number of specific fragments extracted= 2 number of extra gaps= 0 total=2440 Number of alignments=703 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set Warning: unaligning (T0349)V11 because first residue in template chain is (1dzkA)F10 T0349 12 :LLS 1dzkA 11 :ELS T0349 15 :AVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1dzkA 16 :WITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGN Number of specific fragments extracted= 2 number of extra gaps= 0 total=2442 Number of alignments=704 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 17 :GALLDGADIGHL 1dzkA 27 :EKIGENAPFQVF T0349 29 :VLDQNMS 1dzkA 43 :EFDDKES T0349 38 :EGSLGVIP 1dzkA 60 :NGICEEFS T0349 48 :VL 1dzkA 98 :LI T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1dzkA 154 :DCPA Number of specific fragments extracted= 6 number of extra gaps= 0 total=2448 Number of alignments=705 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 19 :LLDGAD 1dzkA 28 :KIGENA T0349 25 :IGHLVLDQNMS 1dzkA 39 :MRSIEFDDKES T0349 36 :ILEGSLGVIPR 1dzkA 58 :KENGICEEFSL T0349 48 :VL 1dzkA 98 :LI T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1dzkA 154 :DCPA Number of specific fragments extracted= 6 number of extra gaps= 0 total=2454 Number of alignments=706 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHE 1dzkA 116 :GLLGKGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2455 Number of alignments=707 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 34 :MSILEGSLG 1dzkA 111 :KTIMTGLLG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHE 1dzkA 120 :KGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2457 Number of alignments=708 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 34 :MSILEGSLGVI 1dzkA 111 :KTIMTGLLGKG T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=2459 Number of alignments=709 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 35 :SILEGSLGV 1dzkA 112 :TIMTGLLGK T0349 50 :VHEDDLAGARRLLTDAGLAHEL 1dzkA 124 :IEDQDLEKFKEVTRENGIPEEN Number of specific fragments extracted= 2 number of extra gaps= 0 total=2461 Number of alignments=710 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set Warning: unaligning (T0349)V11 because first residue in template chain is (1dzkA)F10 T0349 12 :LLS 1dzkA 11 :ELS T0349 15 :AVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1dzkA 16 :WITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGN Number of specific fragments extracted= 2 number of extra gaps= 0 total=2463 Number of alignments=711 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set Warning: unaligning (T0349)V11 because first residue in template chain is (1dzkA)F10 T0349 12 :LLS 1dzkA 11 :ELS T0349 15 :AVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRS 1dzkA 16 :WITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2465 Number of alignments=712 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 3 :ELLRTND 1dzkA 19 :SYIGSSD T0349 22 :GADIGHLVLDQ 1dzkA 30 :GENAPFQVFMR T0349 35 :SILEG 1dzkA 112 :TIMTG T0349 43 :VIPRRVLVHEDDLAGARRLLTDAGLAHEL 1dzkA 117 :LLGKGTDIEDQDLEKFKEVTRENGIPEEN T0349 72 :RSDD 1dzkA 154 :DCPA Number of specific fragments extracted= 5 number of extra gaps= 0 total=2470 Number of alignments=713 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 4 :LLRTNDA 1dzkA 20 :YIGSSDL T0349 21 :DGAD 1dzkA 46 :DKES T0349 29 :VLDQNMSILEGSLGVIP 1dzkA 65 :EFSLIGTKQEGNTYDVN T0349 48 :VL 1dzkA 98 :LI T0349 50 :VHEDDLAGARRLLTDAGLAHE 1dzkA 124 :IEDQDLEKFKEVTRENGIPEE T0349 71 :LRSDD 1dzkA 153 :DDCPA Number of specific fragments extracted= 6 number of extra gaps= 0 total=2476 Number of alignments=714 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 50 :VHEDDLAGARRLLTDAGLAHE 1dzkA 124 :IEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2477 Number of alignments=715 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 36 :ILEGSLG 1dzkA 113 :IMTGLLG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHE 1dzkA 120 :KGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2479 Number of alignments=716 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 38 :EGSLG 1dzkA 115 :TGLLG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHE 1dzkA 120 :KGTDIEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2481 Number of alignments=717 # 1dzkA read from 1dzkA/merged-a2m # found chain 1dzkA in training set T0349 50 :VHEDDLAGARRLLTDAGLAHE 1dzkA 124 :IEDQDLEKFKEVTRENGIPEE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2482 Number of alignments=718 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zhvA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1zhvA/merged-a2m # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :MRELL 1zhvA 2 :APRIK T0349 6 :RTND 1zhvA 39 :RTDD T0349 10 :AVLLSAVGALLDGADIGHLVLDQNMSILEGS 1zhvA 68 :FQGPFAFDETGIVLSVISPLSTNGIGIFVVS T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 99 :TFDGDHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 4 number of extra gaps= 0 total=2486 Number of alignments=719 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :MRELLRT 1zhvA 2 :APRIKLK T0349 8 :NDAVLLS 1zhvA 12 :GSYGIAR T0349 15 :AVGALLDG 1zhvA 24 :AIPAWADG T0349 23 :ADIGHLVLDQNMSILEGS 1zhvA 81 :LSVISPLSTNGIGIFVVS T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 99 :TFDGDHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 5 number of extra gaps= 0 total=2491 Number of alignments=720 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 48 :VLVHEDDLAGARRLLTDAG 1zhvA 105 :LLVRSNDLEKTADLLANAG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2492 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 24 :DIGHLVLDQNMSILEGS 1zhvA 82 :SVISPLSTNGIGIFVVS T0349 42 :GVIPRRVLVHEDDLAGARRLLTDAGL 1zhvA 99 :TFDGDHLLVRSNDLEKTADLLANAGH Number of specific fragments extracted= 2 number of extra gaps= 0 total=2494 Number of alignments=721 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGH 1zhvA 5 :IKLKILNGSYGIARLSASEAIPAWADG T0349 29 :VLDQNMSILEGSLGVIPRR 1zhvA 32 :GGFVSITRTDDELSIVCLI T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 105 :LLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 3 number of extra gaps= 0 total=2497 Number of alignments=722 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGAD 1zhvA 5 :IKLKILNGSYGIARLSASEAIPAW T0349 25 :IGHL 1zhvA 32 :GGFV T0349 29 :VLDQNMSILEG 1zhvA 39 :RTDDELSIVCL T0349 40 :SLGVIP 1zhvA 73 :AFDETG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 103 :DHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 5 number of extra gaps= 0 total=2502 Number of alignments=723 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 48 :VLVHEDDLAGARRLLTDAGL 1zhvA 105 :LLVRSNDLEKTADLLANAGH Number of specific fragments extracted= 1 number of extra gaps= 0 total=2503 Number of alignments=724 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 48 :VLVHEDDLAGARRLLTDAGLA 1zhvA 105 :LLVRSNDLEKTADLLANAGHS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2504 Number of alignments=725 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLDQ 1zhvA 2 :APRIKLKILNGSYGIARLSASEAIPAWADGGG T0349 33 :NMSILEGSLGVIPRR 1zhvA 36 :SITRTDDELSIVCLI T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 105 :LLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 3 number of extra gaps= 0 total=2507 Number of alignments=726 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGADIGHLVLD 1zhvA 2 :APRIKLKILNGSYGIARLSASEAIPAWADGG T0349 32 :Q 1zhvA 42 :D T0349 33 :NMSILEGSLGV 1zhvA 64 :SCFKFQGPFAF T0349 44 :IP 1zhvA 84 :IS T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 103 :DHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 5 number of extra gaps= 0 total=2512 Number of alignments=727 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 48 :VLVHEDDLAGARRLLTDAG 1zhvA 105 :LLVRSNDLEKTADLLANAG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2513 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 48 :VLVHEDDLAGARRLLTDAGL 1zhvA 105 :LLVRSNDLEKTADLLANAGH Number of specific fragments extracted= 1 number of extra gaps= 0 total=2514 Number of alignments=728 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 48 :VLVHEDDLAGARRLLTDAG 1zhvA 105 :LLVRSNDLEKTADLLANAG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2515 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 46 :RRVLVHEDDLAGARRLLTDAGL 1zhvA 103 :DHLLVRSNDLEKTADLLANAGH Number of specific fragments extracted= 1 number of extra gaps= 0 total=2516 Number of alignments=729 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGAD 1zhvA 7 :LKILNGSYGIARLSASEAIPAWAD T0349 25 :IGHLVLDQNMSIL 1zhvA 35 :VSITRTDDELSIV T0349 38 :EGSLGVI 1zhvA 89 :TNGIGIF T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 4 number of extra gaps= 0 total=2520 Number of alignments=730 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 2 :RELLRTNDAVLLSAVGALLDGA 1zhvA 35 :VSITRTDDELSIVCLIDRIPQD T0349 24 :DIGH 1zhvA 62 :GWSC T0349 28 :LVLDQNMSIL 1zhvA 72 :FAFDETGIVL T0349 39 :GSLGVI 1zhvA 90 :NGIGIF T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 5 number of extra gaps= 0 total=2525 Number of alignments=731 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :M 1zhvA 2 :A T0349 6 :RTND 1zhvA 39 :RTDD T0349 12 :LLSAVGALLDGADIGHLVL 1zhvA 79 :IVLSVISPLSTNGIGIFVV T0349 35 :SILEG 1zhvA 98 :STFDG T0349 46 :RRVLVHEDDLAGARRLLTDAGLA 1zhvA 103 :DHLLVRSNDLEKTADLLANAGHS T0349 69 :HELRSDD 1zhvA 129 :EHHHHHH Number of specific fragments extracted= 6 number of extra gaps= 0 total=2531 Number of alignments=732 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :M 1zhvA 2 :A T0349 12 :LLSAVGALLDGADIGHLVLDQNM 1zhvA 79 :IVLSVISPLSTNGIGIFVVSTFD T0349 45 :PRRVLVHEDDLAGARRLLTDAGLA 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHS T0349 69 :HELRSDD 1zhvA 129 :EHHHHHH Number of specific fragments extracted= 4 number of extra gaps= 0 total=2535 Number of alignments=733 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 48 :VLVHEDDLAGARRLLTDAG 1zhvA 105 :LLVRSNDLEKTADLLANAG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2536 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 16 :VGALLDGADIGHLVL 1zhvA 83 :VISPLSTNGIGIFVV T0349 35 :SILEGS 1zhvA 98 :STFDGD T0349 47 :RVLVHEDDLAGARRLLTDAGLAHE 1zhvA 104 :HLLVRSNDLEKTADLLANAGHSLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2539 Number of alignments=734 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 15 :AVGALLDGADIGHLVL 1zhvA 82 :SVISPLSTNGIGIFVV T0349 35 :SILEG 1zhvA 98 :STFDG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 103 :DHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 3 number of extra gaps= 0 total=2542 Number of alignments=735 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 13 :LSAVGALLDGADIGHLVLDQNM 1zhvA 80 :VLSVISPLSTNGIGIFVVSTFD T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAH 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSL Number of specific fragments extracted= 2 number of extra gaps= 0 total=2544 Number of alignments=736 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGAD 1zhvA 7 :LKILNGSYGIARLSASEAIPAWAD T0349 25 :IGHLVLDQNMSIL 1zhvA 35 :VSITRTDDELSIV T0349 38 :EGSLGVI 1zhvA 89 :TNGIGIF T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 4 number of extra gaps= 0 total=2548 Number of alignments=737 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 2 :RELLRTNDAVLLSAVGALLDGA 1zhvA 35 :VSITRTDDELSIVCLIDRIPQD T0349 24 :DIGH 1zhvA 62 :GWSC T0349 28 :LVLDQNMSIL 1zhvA 72 :FAFDETGIVL T0349 39 :GSLGVI 1zhvA 90 :NGIGIF T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 5 number of extra gaps= 0 total=2553 Number of alignments=738 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :M 1zhvA 2 :A T0349 4 :LLRTND 1zhvA 37 :ITRTDD T0349 12 :LLSAVGALLDGADIGHLVL 1zhvA 79 :IVLSVISPLSTNGIGIFVV T0349 35 :SILEG 1zhvA 98 :STFDG T0349 46 :RRVLVHEDDLAGARRLLTDAGLA 1zhvA 103 :DHLLVRSNDLEKTADLLANAGHS T0349 69 :HELRSDD 1zhvA 129 :EHHHHHH Number of specific fragments extracted= 6 number of extra gaps= 0 total=2559 Number of alignments=739 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :M 1zhvA 2 :A T0349 2 :RELLRTND 1zhvA 35 :VSITRTDD T0349 12 :LLSAVGALLDGADIGHLVLDQNM 1zhvA 79 :IVLSVISPLSTNGIGIFVVSTFD T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHEL 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSLLL T0349 72 :RSDD 1zhvA 132 :HHHH Number of specific fragments extracted= 5 number of extra gaps= 0 total=2564 Number of alignments=740 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 48 :VLVHEDDLAGARRLLTDAG 1zhvA 105 :LLVRSNDLEKTADLLANAG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2565 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 16 :VGALLDGADIGHLVL 1zhvA 83 :VISPLSTNGIGIFVV T0349 35 :SILEGS 1zhvA 98 :STFDGD T0349 47 :RVLVHEDDLAGARRLLTDAGLAHE 1zhvA 104 :HLLVRSNDLEKTADLLANAGHSLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2568 Number of alignments=741 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 12 :LLSAVGALLDGADIGHLVL 1zhvA 79 :IVLSVISPLSTNGIGIFVV T0349 35 :SILEG 1zhvA 98 :STFDG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 103 :DHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 3 number of extra gaps= 0 total=2571 Number of alignments=742 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 12 :LLSAVGALLDGADIGHLVLDQNM 1zhvA 79 :IVLSVISPLSTNGIGIFVVSTFD T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSD 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSLLLEHH Number of specific fragments extracted= 2 number of extra gaps= 0 total=2573 Number of alignments=743 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGAD 1zhvA 7 :LKILNGSYGIARLSASEAIPAWAD T0349 25 :IGHLVLDQNMSIL 1zhvA 35 :VSITRTDDELSIV T0349 38 :EGSLGVI 1zhvA 89 :TNGIGIF T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 4 number of extra gaps= 0 total=2577 Number of alignments=744 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 4 :LLRTNDAVLLSAVGALLDGA 1zhvA 37 :ITRTDDELSIVCLIDRIPQD T0349 24 :DIGH 1zhvA 62 :GWSC T0349 28 :LVLDQNMSILE 1zhvA 72 :FAFDETGIVLS T0349 39 :GSLGVI 1zhvA 90 :NGIGIF T0349 45 :PRRVLVHEDDLAGARRLLTDAGLAHELRSD 1zhvA 102 :GDHLLVRSNDLEKTADLLANAGHSLLLEHH Number of specific fragments extracted= 5 number of extra gaps= 0 total=2582 Number of alignments=745 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :M 1zhvA 2 :A T0349 2 :RELLRTNDAV 1zhvA 35 :VSITRTDDEL T0349 12 :LLSAVGALLDGADIGHLVL 1zhvA 79 :IVLSVISPLSTNGIGIFVV T0349 35 :SILEGS 1zhvA 98 :STFDGD T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELR 1zhvA 104 :HLLVRSNDLEKTADLLANAGHSLLLE T0349 73 :SDD 1zhvA 133 :HHH Number of specific fragments extracted= 6 number of extra gaps= 0 total=2588 Number of alignments=746 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 1 :M 1zhvA 2 :A T0349 2 :RELLRTNDAV 1zhvA 35 :VSITRTDDEL T0349 12 :LLSAVGALLDGADIGHLVLDQ 1zhvA 79 :IVLSVISPLSTNGIGIFVVST T0349 37 :LEG 1zhvA 100 :FDG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHEL 1zhvA 103 :DHLLVRSNDLEKTADLLANAGHSLLL T0349 72 :RSDD 1zhvA 132 :HHHH Number of specific fragments extracted= 6 number of extra gaps= 0 total=2594 Number of alignments=747 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 48 :VLVHEDDLAGARRLLTDAG 1zhvA 105 :LLVRSNDLEKTADLLANAG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2595 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 16 :VGALLDGADIGHLVL 1zhvA 83 :VISPLSTNGIGIFVV T0349 35 :SILEGS 1zhvA 98 :STFDGD T0349 47 :RVLVHEDDLAGARRLLTDAGLAH 1zhvA 104 :HLLVRSNDLEKTADLLANAGHSL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2598 Number of alignments=748 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 15 :AVGALLDGADIGHLVL 1zhvA 82 :SVISPLSTNGIGIFVV T0349 35 :SILEGS 1zhvA 98 :STFDGD T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1zhvA 104 :HLLVRSNDLEKTADLLANAGHSLLLEHHH Number of specific fragments extracted= 3 number of extra gaps= 0 total=2601 Number of alignments=749 # 1zhvA read from 1zhvA/merged-a2m # found chain 1zhvA in template set T0349 9 :DAVLLSAVGALLDGADIGHLVLDQ 1zhvA 76 :ETGIVLSVISPLSTNGIGIFVVST T0349 37 :LEG 1zhvA 100 :FDG T0349 46 :RRVLVHEDDLAGARRLLTDAGLAHELRS 1zhvA 103 :DHLLVRSNDLEKTADLLANAGHSLLLEH Number of specific fragments extracted= 3 number of extra gaps= 0 total=2604 Number of alignments=750 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1xaa/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1xaa expands to /projects/compbio/data/pdb/1xaa.pdb.gz 1xaa:Warning: there is no chain 1xaa will retry with 1xaaA # T0349 read from 1xaa/merged-a2m # 1xaa read from 1xaa/merged-a2m # adding 1xaa to template set # found chain 1xaa in template set Warning: unaligning (T0349)R72 because last residue in template chain is (1xaa)A345 T0349 2 :RELLRTNDAVLLSAVGA 1xaa 58 :RKGVEEAEAVLLGSVGG T0349 19 :LLDGA 1xaa 79 :GLPRK T0349 24 :D 1xaa 127 :D T0349 25 :IGHL 1xaa 211 :LEHQ T0349 29 :VLDQNMSILEGSLGVIPRRVLVHE 1xaa 242 :ILSDLASVLPGSLGLLPSASLGRG T0349 53 :DDLAGARR 1xaa 277 :PDIAGKGI T0349 61 :LLTDAGLA 1xaa 290 :AILSAAMM T0349 69 :HEL 1xaa 342 :RHL Number of specific fragments extracted= 8 number of extra gaps= 0 total=2612 Number of alignments=751 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAG 1xaa 4 :AVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2613 Number of alignments=752 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGA 1xaa 57 :TRKGVEEAEAVLLGSVGGPKWDG T0349 24 :DIGHLV 1xaa 108 :VFPGLE T0349 30 :LDQNMSILEGSLGVIPRRVL 1xaa 243 :LSDLASVLPGSLGLLPSASL T0349 50 :VHEDDLAGARRLLTDAGLAHE 1xaa 302 :FGLVELARKVEDAVAKALLET T0349 72 :RSDD 1xaa 323 :PPPD Number of specific fragments extracted= 5 number of extra gaps= 0 total=2618 Number of alignments=753 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGA 1xaa 57 :TRKGVEEAEAVLLGSVGGPKWDG T0349 24 :DI 1xaa 127 :DV T0349 26 :GHL 1xaa 212 :EHQ T0349 29 :VLDQNMSILEGSLGVIPRR 1xaa 242 :ILSDLASVLPGSLGLLPSA T0349 48 :VLVHEDDLAGARRLLTDAGLAH 1xaa 297 :MLEHAFGLVELARKVEDAVAKA T0349 70 :E 1xaa 322 :T T0349 72 :RSDD 1xaa 323 :PPPD Number of specific fragments extracted= 7 number of extra gaps= 0 total=2625 Number of alignments=754 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHE 1xaa 4 :AVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2626 Number of alignments=755 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAG 1xaa 4 :AVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2627 Number of alignments=756 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 29 :VLDQNMSILEGSLGVIP 1xaa 242 :ILSDLASVLPGSLGLLP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2628 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 27 :HLVLDQNMSILEGSLGVIPRRV 1xaa 240 :GDILSDLASVLPGSLGLLPSAS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2629 Number of alignments=757 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MR 1xaa 1 :MK T0349 17 :GALLDGADIGHLVLDQNMSIL 1xaa 3 :VAVLPGDGIGPEVTEAALKVL T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1xaa 24 :RALDEAEGLGLAYEVFPFGGAAIDAFGEP Number of specific fragments extracted= 3 number of extra gaps= 0 total=2632 Number of alignments=758 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MRELLRTNDAV 1xaa 1 :MKVAVLPGDGI T0349 12 :LLSAVGALLD 1xaa 19 :ALKVLRALDE T0349 22 :GADIGHLV 1xaa 43 :GAAIDAFG T0349 30 :LDQNMSILEGSLG 1xaa 61 :VEEAEAVLLGSVG T0349 44 :IPRRVLVHE 1xaa 80 :LPRKIRPET Number of specific fragments extracted= 5 number of extra gaps= 0 total=2637 Number of alignments=759 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :M 1xaa 1 :M T0349 4 :LLRTNDAVLLSAVGALLDGADIG 1xaa 11 :IGPEVTEAALKVLRALDEAEGLG T0349 27 :HLVLDQNMSILEGSLGVIP 1xaa 36 :YEVFPFGGAAIDAFGEPFP T0349 56 :AGARRLLTD 1xaa 55 :EPTRKGVEE T0349 65 :AGLAHELR 1xaa 78 :DGLPRKIR Number of specific fragments extracted= 5 number of extra gaps= 0 total=2642 Number of alignments=760 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :M 1xaa 1 :M T0349 6 :RTNDAVLLSAVGALLDGADIG 1xaa 13 :PEVTEAALKVLRALDEAEGLG T0349 27 :HLVLDQNMSILEGSLGVIP 1xaa 36 :YEVFPFGGAAIDAFGEPFP T0349 56 :AGARRLLTD 1xaa 55 :EPTRKGVEE T0349 65 :AGLAHELR 1xaa 78 :DGLPRKIR Number of specific fragments extracted= 5 number of extra gaps= 0 total=2647 Number of alignments=761 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPR 1xaa 236 :GNIFGDILSDLASVLPGSLGLLPS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2648 Number of alignments=762 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPRRV 1xaa 236 :GNIFGDILSDLASVLPGSLGLLPSAS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2649 Number of alignments=763 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 34 :MSILEGSLGVIPRRVL 1xaa 247 :ASVLPGSLGLLPSASL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2650 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 10 :AVLLSAVGALLDGADIGHLVLDQNMS 1xaa 17 :EAALKVLRALDEAEGLGLAYEVFPFG T0349 36 :ILEGSLGVI 1xaa 45 :AIDAFGEPF T0349 55 :LAGARRLLTD 1xaa 54 :PEPTRKGVEE T0349 65 :AGLAHELR 1xaa 78 :DGLPRKIR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2654 Number of alignments=764 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MR 1xaa 1 :MK T0349 17 :GALLDGADIGHLVLDQNMSIL 1xaa 3 :VAVLPGDGIGPEVTEAALKVL T0349 47 :RVLVHEDDLAGARRLLTDAGLAHELRSDD 1xaa 24 :RALDEAEGLGLAYEVFPFGGAAIDAFGEP Number of specific fragments extracted= 3 number of extra gaps= 0 total=2657 Number of alignments=765 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MRELLRTNDAV 1xaa 1 :MKVAVLPGDGI T0349 12 :LLSAVGALLD 1xaa 19 :ALKVLRALDE T0349 22 :GADIGHLV 1xaa 43 :GAAIDAFG T0349 30 :LDQNMSILEGSLG 1xaa 61 :VEEAEAVLLGSVG T0349 44 :IPRRVLVHE 1xaa 80 :LPRKIRPET Number of specific fragments extracted= 5 number of extra gaps= 0 total=2662 Number of alignments=766 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MRELLRTND 1xaa 1 :MKVAVLPGD T0349 10 :AVLLSAVGALL 1xaa 17 :EAALKVLRALD T0349 21 :DGADIGHLVLDQNMSILEGSLGVIP 1xaa 30 :EGLGLAYEVFPFGGAAIDAFGEPFP T0349 56 :AGARRLLTD 1xaa 55 :EPTRKGVEE T0349 65 :AGLAHELR 1xaa 78 :DGLPRKIR Number of specific fragments extracted= 5 number of extra gaps= 0 total=2667 Number of alignments=767 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MRELLRTND 1xaa 1 :MKVAVLPGD T0349 10 :AVLLSAVGALLD 1xaa 13 :PEVTEAALKVLR T0349 22 :GADIGHLVLDQNMSILEGSLGVI 1xaa 31 :GLGLAYEVFPFGGAAIDAFGEPF T0349 51 :HEDDLAGARR 1xaa 54 :PEPTRKGVEE T0349 65 :AGLAHELR 1xaa 78 :DGLPRKIR Number of specific fragments extracted= 5 number of extra gaps= 0 total=2672 Number of alignments=768 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPR 1xaa 236 :GNIFGDILSDLASVLPGSLGLLPS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2673 Number of alignments=769 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPRRV 1xaa 236 :GNIFGDILSDLASVLPGSLGLLPSAS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2674 Number of alignments=770 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 34 :MSILEGSLGVIPRRVL 1xaa 247 :ASVLPGSLGLLPSASL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2675 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 11 :VLLSAVGALLD 1xaa 18 :AALKVLRALDE T0349 22 :GADIGHLVLDQNMSILEGSLGVI 1xaa 31 :GLGLAYEVFPFGGAAIDAFGEPF T0349 51 :HEDDLAGARR 1xaa 54 :PEPTRKGVEE T0349 65 :AGLAHELR 1xaa 78 :DGLPRKIR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2679 Number of alignments=771 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MRELLRTNDAVLLSAVGALL 1xaa 1 :MKVAVLPGDGIGPEVTEAAL T0349 21 :DGADIGHLVLDQNMSILEGSLGVIPRR 1xaa 30 :EGLGLAYEVFPFGGAAIDAFGEPFPEP T0349 51 :HEDDLAGARRLLTD 1xaa 57 :TRKGVEEAEAVLLG T0349 65 :AGLAHELRSDD 1xaa 78 :DGLPRKIRPET Number of specific fragments extracted= 4 number of extra gaps= 0 total=2683 Number of alignments=772 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MRELLRTNDAVLLSAVGALLD 1xaa 1 :MKVAVLPGDGIGPEVTEAALK T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRR 1xaa 31 :GLGLAYEVFPFGGAAIDAFGEPFPEP T0349 51 :HEDDLAGARRLLTD 1xaa 57 :TRKGVEEAEAVLLG T0349 65 :AGLAHELRSDD 1xaa 78 :DGLPRKIRPET Number of specific fragments extracted= 4 number of extra gaps= 0 total=2687 Number of alignments=773 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MRELLRTND 1xaa 1 :MKVAVLPGD T0349 10 :AVLLSAVGALL 1xaa 17 :EAALKVLRALD T0349 21 :DGADIGHLVLDQNMSILEGSLGVIP 1xaa 30 :EGLGLAYEVFPFGGAAIDAFGEPFP T0349 56 :AGARRLLTD 1xaa 55 :EPTRKGVEE T0349 65 :AGLAHELRS 1xaa 78 :DGLPRKIRP Number of specific fragments extracted= 5 number of extra gaps= 0 total=2692 Number of alignments=774 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 1 :MR 1xaa 1 :MK T0349 10 :AVLLSAVGALLD 1xaa 13 :PEVTEAALKVLR T0349 22 :GADIGHLVLDQNMSILEGSLGVIP 1xaa 31 :GLGLAYEVFPFGGAAIDAFGEPFP T0349 56 :AGARRLLTD 1xaa 55 :EPTRKGVEE T0349 65 :AGLAHELR 1xaa 78 :DGLPRKIR Number of specific fragments extracted= 5 number of extra gaps= 0 total=2697 Number of alignments=775 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIP 1xaa 236 :GNIFGDILSDLASVLPGSLGLLP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2698 Number of alignments=776 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 24 :DIGHLVLDQNMSILEGSLGVIPRR 1xaa 237 :NIFGDILSDLASVLPGSLGLLPSA Number of specific fragments extracted= 1 number of extra gaps= 0 total=2699 Number of alignments=777 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 13 :LSAVGALLDGADIGHLVLDQN 1xaa 166 :ARVAFEAARKRRKHVVSVDKA Number of specific fragments extracted= 1 number of extra gaps= 0 total=2700 Number of alignments=778 # 1xaa read from 1xaa/merged-a2m # found chain 1xaa in template set T0349 12 :LLSAVGALLDGADIGHLVLDQNMS 1xaa 165 :VARVAFEAARKRRKHVVSVDKANV T0349 52 :EDDLAGARRLLTDA 1xaa 189 :LEVGEFWRKTVEEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2702 Number of alignments=779 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1jbeA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0349 read from 1jbeA/merged-a2m # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)R46 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1jbeA)A77 Warning: unaligning (T0349)R47 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)V48 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)L49 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 1jbeA 6 :LKFLVVDDFSTMRRIVRNLLKELGF T0349 26 :GHLVLDQNMSILEG 1jbeA 52 :GFVISDWNMPNMDG T0349 40 :SLGVIP 1jbeA 68 :LLKTIR T0349 50 :VHEDDLAGARRLLTDAGLAHELRSDD 1jbeA 80 :ALPVLMVTAEAKKENIIAAAQAGASG Number of specific fragments extracted= 4 number of extra gaps= 0 total=2706 Number of alignments=780 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 Warning: unaligning (T0349)D74 because last residue in template chain is (1jbeA)M129 T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 1jbeA 6 :LKFLVVDDFSTMRRIVRNLLKELGF T0349 26 :GHLVLDQNMSILEGS 1jbeA 52 :GFVISDWNMPNMDGL T0349 43 :VIPRRVLVHEDDLAGAR 1jbeA 80 :ALPVLMVTAEAKKENII T0349 60 :RLLTDAGLAHELRS 1jbeA 115 :TLEEKLNKIFEKLG Number of specific fragments extracted= 4 number of extra gaps= 1 total=2710 Number of alignments=781 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 44 :IPRRVLVHEDDLAGARRL 1jbeA 4 :KELKFLVVDDFSTMRRIV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2711 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 45 :PRRVLVHEDDL 1jbeA 5 :ELKFLVVDDFS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2712 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 1 :MRELLRTNDAVLLSAVGALLDGADI 1jbeA 6 :LKFLVVDDFSTMRRIVRNLLKELGF T0349 26 :GHLVLDQNMSILEG 1jbeA 52 :GFVISDWNMPNMDG T0349 40 :SLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD 1jbeA 80 :ALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAAT Number of specific fragments extracted= 3 number of extra gaps= 0 total=2715 Number of alignments=782 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 3 :ELLRTNDAVLLSAVGA 1jbeA 15 :STMRRIVRNLLKELGF T0349 19 :LLDGADIGHLVLDQNMSILEGS 1jbeA 45 :KLQAGGYGFVISDWNMPNMDGL T0349 43 :VIPRRVLVHEDDLAGARR 1jbeA 80 :ALPVLMVTAEAKKENIIA T0349 61 :LLTDAGLAHELRS 1jbeA 116 :LEEKLNKIFEKLG Number of specific fragments extracted= 4 number of extra gaps= 1 total=2719 Number of alignments=783 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 18 :ALLDGADIGHLVLDQNMSILEG 1jbeA 44 :NKLQAGGYGFVISDWNMPNMDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2720 Number of alignments=784 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 19 :LLDGADIGHLVLDQNMSILEG 1jbeA 45 :KLQAGGYGFVISDWNMPNMDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2721 Number of alignments=785 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)T63 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1jbeA)A77 T0349 1 :MRELLRTNDAVLLSAVGALLDGADIG 1jbeA 6 :LKFLVVDDFSTMRRIVRNLLKELGFN T0349 27 :HLVLDQNMSILEGSLGVIPRRVLV 1jbeA 33 :VEEAEDGVDALNKLQAGGYGFVIS T0349 51 :HEDDLAGARRLL 1jbeA 62 :NMDGLELLKTIR T0349 64 :DAGLAHELRSDD 1jbeA 94 :NIIAAAQAGASG Number of specific fragments extracted= 4 number of extra gaps= 0 total=2725 Number of alignments=786 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 1 :MRELLRTNDAVLLSAVGALLDGAD 1jbeA 6 :LKFLVVDDFSTMRRIVRNLLKELG T0349 25 :IGHLVLDQNMSILEGSL 1jbeA 51 :YGFVISDWNMPNMDGLE T0349 43 :VIPRRVLVHEDDLAGARRLL 1jbeA 80 :ALPVLMVTAEAKKENIIAAA T0349 63 :TD 1jbeA 108 :VK T0349 65 :AGLAHELRSDD 1jbeA 119 :KLNKIFEKLGM Number of specific fragments extracted= 5 number of extra gaps= 1 total=2730 Number of alignments=787 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 18 :ALLDGADIGHLVLDQNMSILEG 1jbeA 44 :NKLQAGGYGFVISDWNMPNMDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2731 Number of alignments=788 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 25 :IGHLVLDQNMSILEG 1jbeA 51 :YGFVISDWNMPNMDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2732 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 1 :MRELLRTNDA 1jbeA 5 :ELKFLVVDDF T0349 11 :VLLS 1jbeA 27 :ELGF T0349 15 :AVGALLDGADIGHLVLDQNMSIL 1jbeA 32 :NVEEAEDGVDALNKLQAGGYGFV T0349 39 :GSLGVIPRR 1jbeA 64 :DGLELLKTI T0349 48 :VLVHE 1jbeA 83 :VLMVT T0349 53 :DDLAGARRLLTDAGLAHELRSD 1jbeA 89 :EAKKENIIAAAQAGASGYVVKP Number of specific fragments extracted= 6 number of extra gaps= 0 total=2738 Number of alignments=789 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 32 :QNMSI 1jbeA 23 :NLLKE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2739 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 20 :LDGADIGHLVLDQNMSILEG 1jbeA 46 :LQAGGYGFVISDWNMPNMDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2740 Number of alignments=790 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 21 :DGADIGHLVLDQNMSILEG 1jbeA 47 :QAGGYGFVISDWNMPNMDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2741 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 1 :MRELLRT 1jbeA 17 :MRRIVRN T0349 8 :NDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRR 1jbeA 34 :EEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIR T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1jbeA 84 :LMVTAEAKKENIIAAAQAGASGYVVKPF Number of specific fragments extracted= 3 number of extra gaps= 0 total=2744 Number of alignments=791 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 1 :MRELLRT 1jbeA 17 :MRRIVRN T0349 12 :LLSA 1jbeA 27 :ELGF T0349 16 :VGALLDGADIGHLVLDQNMSILEG 1jbeA 42 :ALNKLQAGGYGFVISDWNMPNMDG T0349 43 :VIPR 1jbeA 80 :ALPV T0349 48 :VLVHEDDLAGARRLLTDAGLAHELR 1jbeA 84 :LMVTAEAKKENIIAAAQAGASGYVV Number of specific fragments extracted= 5 number of extra gaps= 0 total=2749 Number of alignments=792 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 1 :M 1jbeA 2 :A T0349 2 :RELLRT 1jbeA 18 :RRIVRN T0349 8 :NDAV 1jbeA 37 :EDGV T0349 15 :AVGALLDGADIGHLVLDQNMS 1jbeA 41 :DALNKLQAGGYGFVISDWNMP T0349 43 :VIPRRVLVHE 1jbeA 80 :ALPVLMVTAE T0349 54 :DLAGARRLLTDAGLA 1jbeA 90 :AKKENIIAAAQAGAS T0349 69 :HELRSDD 1jbeA 123 :IFEKLGM Number of specific fragments extracted= 7 number of extra gaps= 0 total=2756 Number of alignments=793 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 1 :M 1jbeA 2 :A T0349 2 :RELLRT 1jbeA 22 :RNLLKE T0349 16 :VGALLDGADIGHLVLDQNMS 1jbeA 42 :ALNKLQAGGYGFVISDWNMP T0349 43 :VIPRRVLV 1jbeA 80 :ALPVLMVT T0349 51 :HEDDLAGARR 1jbeA 91 :KKENIIAAAQ T0349 61 :LLTDA 1jbeA 119 :KLNKI T0349 70 :ELRSDD 1jbeA 124 :FEKLGM Number of specific fragments extracted= 7 number of extra gaps= 0 total=2763 Number of alignments=794 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 20 :LDGADIGHLVLDQNMSILEG 1jbeA 46 :LQAGGYGFVISDWNMPNMDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2764 Number of alignments=795 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 19 :LLDGADIGHLVLDQNMSILEGS 1jbeA 45 :KLQAGGYGFVISDWNMPNMDGL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2765 Number of alignments=796 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 16 :VGALLDGADIGHLVLDQNMSIL 1jbeA 42 :ALNKLQAGGYGFVISDWNMPNM T0349 43 :VIPR 1jbeA 80 :ALPV T0349 48 :VLVHEDDLAGARRLLTDAG 1jbeA 84 :LMVTAEAKKENIIAAAQAG Number of specific fragments extracted= 3 number of extra gaps= 0 total=2768 Number of alignments=797 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 16 :VGALLDGADIGHLVLDQNMS 1jbeA 42 :ALNKLQAGGYGFVISDWNMP T0349 43 :VIPRRVLV 1jbeA 80 :ALPVLMVT T0349 51 :HEDDLAGARR 1jbeA 91 :KKENIIAAAQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2771 Number of alignments=798 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 1 :MRELLRT 1jbeA 17 :MRRIVRN T0349 8 :NDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRR 1jbeA 34 :EEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIR T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1jbeA 84 :LMVTAEAKKENIIAAAQAGASGYVVKPF Number of specific fragments extracted= 3 number of extra gaps= 0 total=2774 Number of alignments=799 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 1 :MRELLRT 1jbeA 17 :MRRIVRN T0349 12 :LLSA 1jbeA 27 :ELGF T0349 16 :VGALLDGADIGHLVLDQNMSILEG 1jbeA 42 :ALNKLQAGGYGFVISDWNMPNMDG T0349 43 :VIPR 1jbeA 80 :ALPV T0349 48 :VLVHEDDLAGARRLLTDAGLAHELR 1jbeA 84 :LMVTAEAKKENIIAAAQAGASGYVV Number of specific fragments extracted= 5 number of extra gaps= 0 total=2779 Number of alignments=800 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 1 :MRE 1jbeA 2 :ADK T0349 4 :LLRTNDAVLLSA 1jbeA 9 :LVVDDFSTMRRI T0349 16 :VGALLDGADIGHLVLDQNMSIL 1jbeA 42 :ALNKLQAGGYGFVISDWNMPNM T0349 43 :VIPRRVLV 1jbeA 80 :ALPVLMVT T0349 51 :HEDDLAGARR 1jbeA 91 :KKENIIAAAQ T0349 61 :LLTDAGLAHELRSDD 1jbeA 115 :TLEEKLNKIFEKLGM Number of specific fragments extracted= 6 number of extra gaps= 0 total=2785 Number of alignments=801 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 1 :MRE 1jbeA 2 :ADK T0349 4 :LLRTNDAVLLSAVGAL 1jbeA 9 :LVVDDFSTMRRIVRNL T0349 20 :LDGADIGHLVLDQNMS 1jbeA 46 :LQAGGYGFVISDWNMP T0349 43 :VIPRRVLV 1jbeA 80 :ALPVLMVT T0349 51 :HEDDLAGARR 1jbeA 91 :KKENIIAAAQ T0349 61 :LLTDA 1jbeA 119 :KLNKI T0349 70 :ELRSDD 1jbeA 124 :FEKLGM Number of specific fragments extracted= 7 number of extra gaps= 0 total=2792 Number of alignments=802 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 20 :LDGADIGHLVLDQNMSILEG 1jbeA 46 :LQAGGYGFVISDWNMPNMDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2793 Number of alignments=803 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 19 :LLDGADIGHLVLDQNMSILEGS 1jbeA 45 :KLQAGGYGFVISDWNMPNMDGL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2794 Number of alignments=804 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 16 :VGALLDGADIGHLVLDQNMSILEG 1jbeA 42 :ALNKLQAGGYGFVISDWNMPNMDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2795 Number of alignments=805 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 5 :LRTNDAV 1jbeA 34 :EEAEDGV T0349 15 :AVGALLDGADIGHLVLDQNMS 1jbeA 41 :DALNKLQAGGYGFVISDWNMP T0349 43 :VIPRRVLV 1jbeA 80 :ALPVLMVT T0349 51 :HEDDLAGARR 1jbeA 91 :KKENIIAAAQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=2799 Number of alignments=806 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 1 :MRELLRT 1jbeA 17 :MRRIVRN T0349 8 :NDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRR 1jbeA 34 :EEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIR T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRSDD 1jbeA 84 :LMVTAEAKKENIIAAAQAGASGYVVKPF Number of specific fragments extracted= 3 number of extra gaps= 0 total=2802 Number of alignments=807 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 1 :MRELLRT 1jbeA 17 :MRRIVRN T0349 16 :VGALLDGADIGHLVLDQNMSILEGSLGVIPRR 1jbeA 42 :ALNKLQAGGYGFVISDWNMPNMDGLELLKTIR T0349 48 :VLVHEDDLAGARRLLTDAGLAHELRS 1jbeA 84 :LMVTAEAKKENIIAAAQAGASGYVVK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2805 Number of alignments=808 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 1 :M 1jbeA 2 :A T0349 4 :LLRTNDAVLLSA 1jbeA 9 :LVVDDFSTMRRI T0349 16 :VGALLDGADIGHLVLDQNMS 1jbeA 42 :ALNKLQAGGYGFVISDWNMP T0349 43 :VIPRRVLVHEDDLAG 1jbeA 80 :ALPVLMVTAEAKKEN T0349 59 :RRLLTDAGLAHELRSDD 1jbeA 95 :IIAAAQAGASGYVVKPF Number of specific fragments extracted= 5 number of extra gaps= 0 total=2810 Number of alignments=809 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 1 :MR 1jbeA 2 :AD T0349 7 :TNDAVLLSAVGALLDGADI 1jbeA 12 :DDFSTMRRIVRNLLKELGF T0349 26 :GHLVLDQNMSIL 1jbeA 52 :GFVISDWNMPNM T0349 43 :VIPRRVLVH 1jbeA 80 :ALPVLMVTA T0349 52 :EDDLAGARR 1jbeA 92 :KENIIAAAQ T0349 61 :LLTD 1jbeA 119 :KLNK T0349 74 :DD 1jbeA 128 :GM Number of specific fragments extracted= 7 number of extra gaps= 0 total=2817 Number of alignments=810 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 20 :LDGADIGHLVLDQNMSILEG 1jbeA 46 :LQAGGYGFVISDWNMPNMDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2818 Number of alignments=811 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set T0349 18 :ALLDGADIGHLVLDQNMSILEGS 1jbeA 44 :NKLQAGGYGFVISDWNMPNMDGL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2819 Number of alignments=812 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 16 :VGALLDGADIGHLVLDQNMS 1jbeA 42 :ALNKLQAGGYGFVISDWNMP T0349 43 :VIPRRVLVHEDDLAG 1jbeA 80 :ALPVLMVTAEAKKEN T0349 59 :RRLLTDAGLAHEL 1jbeA 95 :IIAAAQAGASGYV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2822 Number of alignments=813 # 1jbeA read from 1jbeA/merged-a2m # found chain 1jbeA in training set Warning: unaligning (T0349)S40 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1jbeA)A77 Warning: unaligning (T0349)L41 because of BadResidue code BAD_PEPTIDE in next template residue (1jbeA)S79 Warning: unaligning (T0349)G42 because of BadResidue code BAD_PEPTIDE at template residue (1jbeA)S79 T0349 16 :VGALLDGADIGHLVLDQNMSIL 1jbeA 42 :ALNKLQAGGYGFVISDWNMPNM T0349 43 :VIPRRVLVH 1jbeA 80 :ALPVLMVTA T0349 52 :EDDLAGARR 1jbeA 92 :KENIIAAAQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2825 Number of alignments=814 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1idm/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1idm expands to /projects/compbio/data/pdb/1idm.pdb.gz 1idm:Warning: there is no chain 1idm will retry with 1idmA # T0349 read from 1idm/merged-a2m # 1idm read from 1idm/merged-a2m # adding 1idm to template set # found chain 1idm in template set Warning: unaligning (T0349)R72 because last residue in template chain is (1idm)A343 T0349 2 :RELLRTNDAVLLSAVGA 1idm 58 :RKGVEEAEAVLLGSVGG T0349 19 :LLDG 1idm 79 :TGSV T0349 24 :D 1idm 125 :D T0349 25 :IGHL 1idm 209 :LEHQ T0349 29 :VLDQNMSILEGSLGVIPRRVLVHE 1idm 240 :ILSDLASVLPGSLGLLPSASLGRG T0349 53 :DDLAGARR 1idm 275 :PDIAGKGI T0349 61 :LLTDAGLA 1idm 288 :AILSAAMM T0349 69 :HEL 1idm 340 :RHL Number of specific fragments extracted= 8 number of extra gaps= 0 total=2833 Number of alignments=815 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAG 1idm 4 :AVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2834 Number of alignments=816 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MRELLRTNDAVLLSAVGALLDGA 1idm 57 :TRKGVEEAEAVLLGSVGGPKWGT T0349 24 :DIGHL 1idm 106 :VFPGL T0349 29 :VLDQNMSILEGSLGVIPRRVL 1idm 240 :ILSDLASVLPGSLGLLPSASL T0349 50 :VHEDDLAGARRLLTDAGLAHE 1idm 300 :FGLVELARKVEDAVAKALLET T0349 72 :RSDD 1idm 321 :PPPD Number of specific fragments extracted= 5 number of extra gaps= 0 total=2839 Number of alignments=817 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :M 1idm 1 :M T0349 2 :RELLRTNDAVLLSAVGALLDGA 1idm 58 :RKGVEEAEAVLLGSVGGPKWGT T0349 24 :DI 1idm 125 :DV T0349 26 :GHL 1idm 210 :EHQ T0349 29 :VLDQNMSILEGSLGVIPRRVL 1idm 240 :ILSDLASVLPGSLGLLPSASL T0349 50 :VHEDDLAGARRLLT 1idm 297 :EHAFGLVELARKVE T0349 64 :DAGLAHELRSD 1idm 318 :LETPPPDLGGS Number of specific fragments extracted= 7 number of extra gaps= 0 total=2846 Number of alignments=818 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHE 1idm 4 :AVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2847 Number of alignments=819 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 18 :ALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAG 1idm 4 :AVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2848 Number of alignments=820 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 29 :VLDQNMSILEGSLGVIP 1idm 240 :ILSDLASVLPGSLGLLP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2849 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 27 :HLVLDQNMSILEGSLGVIPRRV 1idm 238 :GDILSDLASVLPGSLGLLPSAS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2850 Number of alignments=821 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MRELLRTNDAVLLSAVGALLD 1idm 1 :MKVAVLPGDGIGPEVTEAALK T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRR 1idm 31 :GLGLAYEVFPFGGAAIDAFGEPFPEP T0349 51 :HEDDLAGARRLLTDAGLAHELRSDD 1idm 57 :TRKGVEEAEAVLLGSVGGPKWGTGS Number of specific fragments extracted= 3 number of extra gaps= 0 total=2853 Number of alignments=822 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MRELLRTNDAV 1idm 1 :MKVAVLPGDGI T0349 12 :LLSAVGALLDGADIG 1idm 19 :ALKVLRALDEAEGLG T0349 27 :HLVLDQNMSILEGSLGVIPRR 1idm 36 :YEVFPFGGAAIDAFGEPFPEP T0349 51 :HEDDLAGARRLLTDAGLAHELRSDD 1idm 57 :TRKGVEEAEAVLLGSVGGPKWGTGS Number of specific fragments extracted= 4 number of extra gaps= 0 total=2857 Number of alignments=823 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :M 1idm 1 :M T0349 4 :LLRTNDAVLLSAVGALL 1idm 11 :IGPEVTEAALKVLRALD T0349 21 :DGADIGHLVLDQNMSILEGSLGVIP 1idm 30 :EGLGLAYEVFPFGGAAIDAFGEPFP T0349 56 :AGARRLLTDAG 1idm 55 :EPTRKGVEEAE T0349 67 :LAHELRSDD 1idm 73 :GGPKWGTGS Number of specific fragments extracted= 5 number of extra gaps= 0 total=2862 Number of alignments=824 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :M 1idm 1 :M T0349 8 :NDAVLLSAVGALLD 1idm 11 :IGPEVTEAALKVLR T0349 22 :GADIGHLVLDQNMSILEGSLGVI 1idm 31 :GLGLAYEVFPFGGAAIDAFGEPF T0349 51 :HEDDLAGARR 1idm 54 :PEPTRKGVEE T0349 65 :AG 1idm 64 :AE T0349 68 :AHELRSDD 1idm 74 :GPKWGTGS Number of specific fragments extracted= 6 number of extra gaps= 0 total=2868 Number of alignments=825 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPR 1idm 234 :GNIFGDILSDLASVLPGSLGLLPS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2869 Number of alignments=826 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPRRV 1idm 234 :GNIFGDILSDLASVLPGSLGLLPSAS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2870 Number of alignments=827 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 34 :MSILEGSLGVIPRRVL 1idm 245 :ASVLPGSLGLLPSASL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2871 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 12 :LLSAVGALLDGADIGHLVLDQNMS 1idm 163 :VARVAFEAARKRRKHVVSVDKANV T0349 52 :EDDLAGARRLLTDA 1idm 187 :LEVGEFWRKTVEEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2873 Number of alignments=828 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MRELLRTNDAVLLSAVGALLD 1idm 1 :MKVAVLPGDGIGPEVTEAALK T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRR 1idm 31 :GLGLAYEVFPFGGAAIDAFGEPFPEP T0349 51 :HEDDLAGARRLLTDAGLAHELRSDD 1idm 57 :TRKGVEEAEAVLLGSVGGPKWGTGS Number of specific fragments extracted= 3 number of extra gaps= 0 total=2876 Number of alignments=829 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MRELLRTNDAV 1idm 1 :MKVAVLPGDGI T0349 12 :LLSAVGALLDGADIG 1idm 19 :ALKVLRALDEAEGLG T0349 27 :HLVLDQNMSILEGSLGVIPRR 1idm 36 :YEVFPFGGAAIDAFGEPFPEP T0349 51 :HEDDLAGARRLLTDAGLAHELRSDD 1idm 57 :TRKGVEEAEAVLLGSVGGPKWGTGS Number of specific fragments extracted= 4 number of extra gaps= 0 total=2880 Number of alignments=830 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MRELLRTND 1idm 1 :MKVAVLPGD T0349 10 :AVLLSAVGALL 1idm 17 :EAALKVLRALD T0349 21 :DGADIGHLVLDQNMSILEGSLGVIP 1idm 30 :EGLGLAYEVFPFGGAAIDAFGEPFP T0349 56 :AGARRLLTDAG 1idm 55 :EPTRKGVEEAE T0349 68 :AHELRSDD 1idm 74 :GPKWGTGS Number of specific fragments extracted= 5 number of extra gaps= 0 total=2885 Number of alignments=831 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MRELLR 1idm 1 :MKVAVL T0349 7 :TNDAVLLSAVGALLD 1idm 10 :GIGPEVTEAALKVLR T0349 22 :GADIGHLVLDQNMSILEGSLGV 1idm 31 :GLGLAYEVFPFGGAAIDAFGEP T0349 50 :VHEDDLAGARR 1idm 53 :FPEPTRKGVEE T0349 68 :AHELRSDD 1idm 74 :GPKWGTGS Number of specific fragments extracted= 5 number of extra gaps= 0 total=2890 Number of alignments=832 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPR 1idm 234 :GNIFGDILSDLASVLPGSLGLLPS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2891 Number of alignments=833 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIPRRV 1idm 234 :GNIFGDILSDLASVLPGSLGLLPSAS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2892 Number of alignments=834 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 34 :MSILEGSLGVIPRRV 1idm 245 :ASVLPGSLGLLPSAS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2893 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 11 :VLLSAVGALLDGADIGHLVLDQNMSI 1idm 162 :RVARVAFEAARKRRKHVVSVDKANVL T0349 53 :DDLAGARRLLTDA 1idm 188 :EVGEFWRKTVEEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2895 Number of alignments=835 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MRELLRTNDAVLLSAVGALL 1idm 1 :MKVAVLPGDGIGPEVTEAAL T0349 21 :DGADIGHLVLDQNMSILEGSLGVIPRR 1idm 30 :EGLGLAYEVFPFGGAAIDAFGEPFPEP T0349 51 :HEDDLAGARRLLTDAGLAHELRSDD 1idm 57 :TRKGVEEAEAVLLGSVGGPKWGTGS Number of specific fragments extracted= 3 number of extra gaps= 0 total=2898 Number of alignments=836 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MRELLRTNDAVLLSAVGALLD 1idm 1 :MKVAVLPGDGIGPEVTEAALK T0349 22 :GADIGHLVLDQNMSILEGSLGVIPRR 1idm 31 :GLGLAYEVFPFGGAAIDAFGEPFPEP T0349 51 :HEDDLAGARRLLTDAGLAHELRSD 1idm 57 :TRKGVEEAEAVLLGSVGGPKWGTG Number of specific fragments extracted= 3 number of extra gaps= 0 total=2901 Number of alignments=837 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MRELLRTND 1idm 1 :MKVAVLPGD T0349 10 :AVLLSAVGALL 1idm 17 :EAALKVLRALD T0349 21 :DGADIGHLVLDQNMSILEGSLGVIP 1idm 30 :EGLGLAYEVFPFGGAAIDAFGEPFP T0349 56 :AGARRLLTDAG 1idm 55 :EPTRKGVEEAE T0349 68 :AHELRSDD 1idm 74 :GPKWGTGS Number of specific fragments extracted= 5 number of extra gaps= 0 total=2906 Number of alignments=838 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 1 :MR 1idm 1 :MK T0349 10 :AVLLSAVGALLD 1idm 13 :PEVTEAALKVLR T0349 22 :GADIGHLVLDQNMSILEGSLGVIP 1idm 31 :GLGLAYEVFPFGGAAIDAFGEPFP T0349 46 :RRVLV 1idm 65 :EAVLL T0349 68 :AHELRSDD 1idm 74 :GPKWGTGS Number of specific fragments extracted= 5 number of extra gaps= 0 total=2911 Number of alignments=839 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 23 :ADIGHLVLDQNMSILEGSLGVIP 1idm 234 :GNIFGDILSDLASVLPGSLGLLP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2912 Number of alignments=840 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 24 :DIGHLVLDQNMSILEGSLGVIPRR 1idm 235 :NIFGDILSDLASVLPGSLGLLPSA Number of specific fragments extracted= 1 number of extra gaps= 0 total=2913 Number of alignments=841 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 13 :LSAVGALLDGADIGHLVLDQN 1idm 164 :ARVAFEAARKRRKHVVSVDKA Number of specific fragments extracted= 1 number of extra gaps= 0 total=2914 Number of alignments=842 # 1idm read from 1idm/merged-a2m # found chain 1idm in template set T0349 12 :LLSAVGALLDGADIGHLVLDQNMS 1idm 163 :VARVAFEAARKRRKHVVSVDKANV T0349 52 :EDDLAGARRLLTDA 1idm 187 :LEVGEFWRKTVEEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2916 Number of alignments=843 # command:NUMB_ALIGNS: 843 evalue: 0 0.0089, weight 5.2713 evalue: 1 0.1749, weight 2.3817 evalue: 2 0.2271, weight 2.1477 evalue: 3 0.2549, weight 2.0467 evalue: 4 0.2577, weight 2.0371 evalue: 5 0.2673, weight 2.0053 evalue: 6 0.7870, weight 1.1579 evalue: 7 1.0461, weight 0.9717 evalue: 8 1.4498, weight 0.7817 evalue: 9 1.5761, weight 0.7373 evalue: 10 0.0093, weight 5.2225 evalue: 11 0.0679, weight 3.2695 evalue: 12 0.2095, weight 2.2193 evalue: 13 0.2458, weight 2.0781 evalue: 14 0.2534, weight 2.0516 evalue: 15 0.3291, weight 1.8279 evalue: 16 0.7332, weight 1.2070 evalue: 17 1.7763, weight 0.6767 evalue: 18 1.8399, weight 0.6595 evalue: 19 2.4984, weight 0.5234 evalue: 20 0.0244, weight 4.2669 evalue: 21 0.1623, weight 2.4500 evalue: 22 0.1775, weight 2.3684 evalue: 23 0.1880, weight 2.3167 evalue: 24 0.2220, weight 2.1678 evalue: 25 0.3635, weight 1.7453 evalue: 26 0.3819, weight 1.7047 evalue: 27 0.4060, weight 1.6547 evalue: 28 0.5450, weight 1.4238 evalue: 29 0.8880, weight 1.0767 evalue: 30 0.0121, weight 4.9615 evalue: 31 0.1717, weight 2.3985 evalue: 32 0.2267, weight 2.1494 evalue: 33 0.2452, weight 2.0805 evalue: 34 0.2685, weight 2.0014 evalue: 35 0.2922, weight 1.9287 evalue: 36 0.8723, weight 1.0885 evalue: 37 1.4213, weight 0.7925 evalue: 38 1.5778, weight 0.7367 evalue: 39 1.8689, weight 0.6520 evalue: 40 0.8723, weight 1.0885 evalue: 41 0.8723, weight 1.0885 evalue: 42 0.8723, weight 1.0885 evalue: 43 0.8723, weight 1.0885 evalue: 44 0.8723, weight 1.0885 evalue: 45 0.8723, weight 1.0885 evalue: 46 0.8723, weight 1.0885 evalue: 47 0.8723, weight 1.0885 evalue: 48 0.8723, weight 1.0885 evalue: 49 0.8723, weight 1.0885 evalue: 50 0.8723, weight 1.0885 evalue: 51 0.8723, weight 1.0885 evalue: 52 0.8723, weight 1.0885 evalue: 53 0.8723, weight 1.0885 evalue: 54 0.8723, weight 1.0885 evalue: 55 0.8723, weight 1.0885 evalue: 56 0.8723, weight 1.0885 evalue: 57 0.8723, weight 1.0885 evalue: 58 0.8723, weight 1.0885 evalue: 59 0.8723, weight 1.0885 evalue: 60 0.8723, weight 1.0885 evalue: 61 0.8723, weight 1.0885 evalue: 62 0.8723, weight 1.0885 evalue: 63 0.8723, weight 1.0885 evalue: 64 0.8723, weight 1.0885 evalue: 65 0.8723, weight 1.0885 evalue: 66 0.8723, weight 1.0885 evalue: 67 0.8723, weight 1.0885 evalue: 68 0.8723, weight 1.0885 evalue: 69 0.8723, weight 1.0885 evalue: 70 0.8723, weight 1.0885 evalue: 71 0.8723, weight 1.0885 evalue: 72 2.4278, weight 0.5352 evalue: 73 2.4278, weight 0.5352 evalue: 74 2.4278, weight 0.5352 evalue: 75 2.4278, weight 0.5352 evalue: 76 2.4278, weight 0.5352 evalue: 77 2.4278, weight 0.5352 evalue: 78 2.4278, weight 0.5352 evalue: 79 2.4278, weight 0.5352 evalue: 80 2.4278, weight 0.5352 evalue: 81 2.4278, weight 0.5352 evalue: 82 2.4278, weight 0.5352 evalue: 83 2.4278, weight 0.5352 evalue: 84 2.4278, weight 0.5352 evalue: 85 2.4278, weight 0.5352 evalue: 86 2.4278, weight 0.5352 evalue: 87 2.4278, weight 0.5352 evalue: 88 2.4278, weight 0.5352 evalue: 89 2.4278, weight 0.5352 evalue: 90 2.4278, weight 0.5352 evalue: 91 2.4278, weight 0.5352 evalue: 92 2.4278, weight 0.5352 evalue: 93 2.4278, weight 0.5352 evalue: 94 2.4278, weight 0.5352 evalue: 95 2.4278, weight 0.5352 evalue: 96 2.4278, weight 0.5352 evalue: 97 2.4278, weight 0.5352 evalue: 98 2.4278, weight 0.5352 evalue: 99 2.4278, weight 0.5352 evalue: 100 2.4278, weight 0.5352 evalue: 101 2.4278, weight 0.5352 evalue: 102 2.4278, weight 0.5352 evalue: 103 2.4278, weight 0.5352 evalue: 104 2.4278, weight 0.5352 evalue: 105 2.4278, weight 0.5352 evalue: 106 2.4278, weight 0.5352 evalue: 107 2.4278, weight 0.5352 evalue: 108 2.4278, weight 0.5352 evalue: 109 2.4278, weight 0.5352 evalue: 110 3.5066, weight 0.3988 evalue: 111 3.5066, weight 0.3988 evalue: 112 3.5066, weight 0.3988 evalue: 113 3.5066, weight 0.3988 evalue: 114 3.5066, weight 0.3988 evalue: 115 3.5066, weight 0.3988 evalue: 116 3.5066, weight 0.3988 evalue: 117 3.5066, weight 0.3988 evalue: 118 3.5066, weight 0.3988 evalue: 119 3.5066, weight 0.3988 evalue: 120 3.5066, weight 0.3988 evalue: 121 3.5066, weight 0.3988 evalue: 122 3.5066, weight 0.3988 evalue: 123 3.5066, weight 0.3988 evalue: 124 3.5066, weight 0.3988 evalue: 125 3.5066, weight 0.3988 evalue: 126 3.5066, weight 0.3988 evalue: 127 3.5066, weight 0.3988 evalue: 128 3.5066, weight 0.3988 evalue: 129 3.5066, weight 0.3988 evalue: 130 3.5066, weight 0.3988 evalue: 131 3.5066, weight 0.3988 evalue: 132 3.5066, weight 0.3988 evalue: 133 3.5066, weight 0.3988 evalue: 134 3.5066, weight 0.3988 evalue: 135 3.5066, weight 0.3988 evalue: 136 3.5066, weight 0.3988 evalue: 137 3.5066, weight 0.3988 evalue: 138 3.5066, weight 0.3988 evalue: 139 3.5066, weight 0.3988 evalue: 140 3.5066, weight 0.3988 evalue: 141 3.5066, weight 0.3988 evalue: 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0.0121, weight 4.9615 evalue: 730 0.0121, weight 4.9615 evalue: 731 0.0121, weight 4.9615 evalue: 732 0.0121, weight 4.9615 evalue: 733 0.0121, weight 4.9615 evalue: 734 0.0121, weight 4.9615 evalue: 735 0.0121, weight 4.9615 evalue: 736 0.0121, weight 4.9615 evalue: 737 0.0121, weight 4.9615 evalue: 738 0.0121, weight 4.9615 evalue: 739 0.0121, weight 4.9615 evalue: 740 0.0121, weight 4.9615 evalue: 741 0.0121, weight 4.9615 evalue: 742 0.0121, weight 4.9615 evalue: 743 0.0121, weight 4.9615 evalue: 744 0.0121, weight 4.9615 evalue: 745 0.0121, weight 4.9615 evalue: 746 0.0121, weight 4.9615 evalue: 747 0.0121, weight 4.9615 evalue: 748 0.0121, weight 4.9615 evalue: 749 0.0121, weight 4.9615 evalue: 750 1.6700, weight 0.7075 evalue: 751 1.6700, weight 0.7075 evalue: 752 1.6700, weight 0.7075 evalue: 753 1.6700, weight 0.7075 evalue: 754 1.6700, weight 0.7075 evalue: 755 1.6700, weight 0.7075 evalue: 756 1.6700, weight 0.7075 evalue: 757 1.6700, weight 0.7075 evalue: 758 1.6700, weight 0.7075 evalue: 759 1.6700, weight 0.7075 evalue: 760 1.6700, weight 0.7075 evalue: 761 1.6700, weight 0.7075 evalue: 762 1.6700, weight 0.7075 evalue: 763 1.6700, weight 0.7075 evalue: 764 1.6700, weight 0.7075 evalue: 765 1.6700, weight 0.7075 evalue: 766 1.6700, weight 0.7075 evalue: 767 1.6700, weight 0.7075 evalue: 768 1.6700, weight 0.7075 evalue: 769 1.6700, weight 0.7075 evalue: 770 1.6700, weight 0.7075 evalue: 771 1.6700, weight 0.7075 evalue: 772 1.6700, weight 0.7075 evalue: 773 1.6700, weight 0.7075 evalue: 774 1.6700, weight 0.7075 evalue: 775 1.6700, weight 0.7075 evalue: 776 1.6700, weight 0.7075 evalue: 777 1.6700, weight 0.7075 evalue: 778 1.6700, weight 0.7075 evalue: 779 2.4979, weight 0.5235 evalue: 780 2.4979, weight 0.5235 evalue: 781 2.4979, weight 0.5235 evalue: 782 2.4979, weight 0.5235 evalue: 783 2.4979, weight 0.5235 evalue: 784 2.4979, weight 0.5235 evalue: 785 2.4979, weight 0.5235 evalue: 786 2.4979, weight 0.5235 evalue: 787 2.4979, weight 0.5235 evalue: 788 2.4979, weight 0.5235 evalue: 789 2.4979, weight 0.5235 evalue: 790 2.4979, weight 0.5235 evalue: 791 2.4979, weight 0.5235 evalue: 792 2.4979, weight 0.5235 evalue: 793 2.4979, weight 0.5235 evalue: 794 2.4979, weight 0.5235 evalue: 795 2.4979, weight 0.5235 evalue: 796 2.4979, weight 0.5235 evalue: 797 2.4979, weight 0.5235 evalue: 798 2.4979, weight 0.5235 evalue: 799 2.4979, weight 0.5235 evalue: 800 2.4979, weight 0.5235 evalue: 801 2.4979, weight 0.5235 evalue: 802 2.4979, weight 0.5235 evalue: 803 2.4979, weight 0.5235 evalue: 804 2.4979, weight 0.5235 evalue: 805 2.4979, weight 0.5235 evalue: 806 2.4979, weight 0.5235 evalue: 807 2.4979, weight 0.5235 evalue: 808 2.4979, weight 0.5235 evalue: 809 2.4979, weight 0.5235 evalue: 810 2.4979, weight 0.5235 evalue: 811 2.4979, weight 0.5235 evalue: 812 2.4979, weight 0.5235 evalue: 813 2.4979, weight 0.5235 evalue: 814 1.6200, weight 0.7230 evalue: 815 1.6200, weight 0.7230 evalue: 816 1.6200, weight 0.7230 evalue: 817 1.6200, weight 0.7230 evalue: 818 1.6200, weight 0.7230 evalue: 819 1.6200, weight 0.7230 evalue: 820 1.6200, weight 0.7230 evalue: 821 1.6200, weight 0.7230 evalue: 822 1.6200, weight 0.7230 evalue: 823 1.6200, weight 0.7230 evalue: 824 1.6200, weight 0.7230 evalue: 825 1.6200, weight 0.7230 evalue: 826 1.6200, weight 0.7230 evalue: 827 1.6200, weight 0.7230 evalue: 828 1.6200, weight 0.7230 evalue: 829 1.6200, weight 0.7230 evalue: 830 1.6200, weight 0.7230 evalue: 831 1.6200, weight 0.7230 evalue: 832 1.6200, weight 0.7230 evalue: 833 1.6200, weight 0.7230 evalue: 834 1.6200, weight 0.7230 evalue: 835 1.6200, weight 0.7230 evalue: 836 1.6200, weight 0.7230 evalue: 837 1.6200, weight 0.7230 evalue: 838 1.6200, weight 0.7230 evalue: 839 1.6200, weight 0.7230 evalue: 840 1.6200, weight 0.7230 evalue: 841 1.6200, weight 0.7230 evalue: 842 1.6200, weight 0.7230 RES2ATOM 0 2 RES2ATOM 1 10 RES2ATOM 2 21 RES2ATOM 3 30 RES2ATOM 4 38 RES2ATOM 5 46 RES2ATOM 6 57 RES2ATOM 7 64 RES2ATOM 8 72 RES2ATOM 9 80 RES2ATOM 10 85 RES2ATOM 11 92 RES2ATOM 12 100 RES2ATOM 13 108 RES2ATOM 14 114 RES2ATOM 15 119 RES2ATOM 17 130 RES2ATOM 18 135 RES2ATOM 19 143 RES2ATOM 20 151 RES2ATOM 22 163 RES2ATOM 23 168 RES2ATOM 24 176 RES2ATOM 26 188 RES2ATOM 27 198 RES2ATOM 28 206 RES2ATOM 29 213 RES2ATOM 30 221 RES2ATOM 31 229 RES2ATOM 32 238 RES2ATOM 33 246 RES2ATOM 34 254 RES2ATOM 35 260 RES2ATOM 36 268 RES2ATOM 37 276 RES2ATOM 39 289 RES2ATOM 40 295 RES2ATOM 42 307 RES2ATOM 43 314 RES2ATOM 44 322 RES2ATOM 45 329 RES2ATOM 46 340 RES2ATOM 47 351 RES2ATOM 48 358 RES2ATOM 49 366 RES2ATOM 50 373 RES2ATOM 51 383 RES2ATOM 52 392 RES2ATOM 53 400 RES2ATOM 54 408 RES2ATOM 55 416 RES2ATOM 57 425 RES2ATOM 58 430 RES2ATOM 59 441 RES2ATOM 60 452 RES2ATOM 61 460 RES2ATOM 62 468 RES2ATOM 63 475 RES2ATOM 64 483 RES2ATOM 66 492 RES2ATOM 67 500 RES2ATOM 68 505 RES2ATOM 69 515 RES2ATOM 70 524 RES2ATOM 71 532 RES2ATOM 72 543 RES2ATOM 73 549 RES2ATOM 74 557 Constraint 431 506 5.1053 6.3816 12.7632 25.4558 Constraint 207 341 5.1180 6.3975 12.7950 23.8680 Constraint 115 493 5.7348 7.1685 14.3370 23.1906 Constraint 177 367 4.9612 6.2015 12.4030 22.3113 Constraint 136 453 4.3636 5.4545 10.9090 22.0491 Constraint 177 426 4.8498 6.0623 12.1245 21.9484 Constraint 199 352 5.2755 6.5944 13.1887 21.6212 Constraint 120 493 5.1612 6.4515 12.9030 21.3866 Constraint 189 352 4.7973 5.9967 11.9933 20.9708 Constraint 207 330 5.4524 6.8155 13.6310 20.8958 Constraint 189 359 5.8555 7.3194 14.6388 20.8134 Constraint 115 484 5.2228 6.5285 13.0569 20.3639 Constraint 214 341 4.6737 5.8421 11.6842 19.6903 Constraint 199 359 4.0018 5.0022 10.0045 19.5594 Constraint 214 330 5.4871 6.8589 13.7177 18.1648 Constraint 431 525 5.3884 6.7355 13.4710 17.7056 Constraint 144 453 4.9829 6.2287 12.4574 17.5250 Constraint 136 461 5.2626 6.5782 13.1564 17.4365 Constraint 120 461 5.2787 6.5983 13.1967 17.3352 Constraint 144 461 5.8929 7.3662 14.7323 17.1096 Constraint 164 453 4.2777 5.3471 10.6943 17.0429 Constraint 207 352 4.7877 5.9847 11.9693 16.9439 Constraint 207 359 5.8979 7.3723 14.7447 16.9002 Constraint 144 426 4.8838 6.1047 12.2094 16.7097 Constraint 177 401 4.1369 5.1712 10.3424 16.5840 Constraint 177 453 5.5783 6.9729 13.9459 16.5658 Constraint 144 367 5.6301 7.0376 14.0752 15.8342 Constraint 136 484 3.8072 4.7590 9.5180 15.6413 Constraint 93 493 4.9245 6.1556 12.3113 15.3354 Constraint 214 359 5.7831 7.2288 14.4576 15.1944 Constraint 120 352 5.0656 6.3319 12.6639 14.9011 Constraint 199 367 5.7209 7.1511 14.3023 14.6949 Constraint 189 367 4.8969 6.1211 12.2422 14.6197 Constraint 214 352 5.6342 7.0428 14.0855 14.3354 Constraint 222 341 5.0749 6.3437 12.6874 13.0930 Constraint 101 207 5.1947 6.4934 12.9868 12.4780 Constraint 177 374 5.8875 7.3594 14.7188 12.2259 Constraint 222 330 5.0343 6.2929 12.5858 11.6050 Constraint 47 501 4.3882 5.4852 10.9704 11.4287 Constraint 120 189 5.5278 6.9097 13.8194 11.4072 Constraint 39 120 5.4946 6.8682 13.7365 11.4003 Constraint 120 330 4.9251 6.1563 12.3127 11.3820 Constraint 93 484 5.7729 7.2161 14.4322 11.1497 Constraint 101 330 4.1885 5.2356 10.4712 10.9269 Constraint 101 261 4.6774 5.8467 11.6934 10.8292 Constraint 39 352 5.2228 6.5285 13.0571 10.1588 Constraint 230 341 4.9151 6.1439 12.2878 9.9935 Constraint 120 484 6.0358 7.5448 15.0895 9.9595 Constraint 131 484 5.9754 7.4692 14.9384 9.8236 Constraint 199 341 4.5325 5.6656 11.3312 9.7823 Constraint 261 330 4.7344 5.9180 11.8360 9.6264 Constraint 230 330 5.3966 6.7458 13.4915 9.6075 Constraint 136 476 5.6592 7.0741 14.1481 9.5971 Constraint 58 330 5.4008 6.7510 13.5020 9.5219 Constraint 47 493 5.5987 6.9984 13.9969 9.3209 Constraint 93 330 5.8980 7.3724 14.7449 9.2461 Constraint 39 501 5.1605 6.4506 12.9013 9.2302 Constraint 39 461 5.2959 6.6198 13.2397 9.0568 Constraint 39 506 4.4627 5.5784 11.1568 8.9364 Constraint 58 120 4.9364 6.1705 12.3411 8.9226 Constraint 189 341 5.7251 7.1564 14.3128 8.6389 Constraint 58 493 5.2069 6.5086 13.0172 8.5549 Constraint 409 525 5.7016 7.1271 14.2541 8.4290 Constraint 255 330 4.6389 5.7987 11.5973 8.3713 Constraint 136 493 5.7279 7.1599 14.3199 8.2671 Constraint 3 374 5.1130 6.3912 12.7825 8.1446 Constraint 101 277 5.2545 6.5681 13.1363 8.1255 Constraint 3 384 3.6515 4.5644 9.1288 8.0528 Constraint 164 426 5.3111 6.6388 13.2776 8.0512 Constraint 39 493 5.0255 6.2819 12.5638 8.0182 Constraint 31 341 5.2144 6.5180 13.0361 7.9286 Constraint 11 367 5.2908 6.6135 13.2270 7.8960 Constraint 11 359 4.8333 6.0417 12.0833 7.8960 Constraint 101 239 5.3838 6.7298 13.4595 7.7963 Constraint 101 255 5.1935 6.4918 12.9837 7.6641 Constraint 230 367 4.5939 5.7424 11.4849 7.5557 Constraint 296 367 5.4435 6.8044 13.6087 7.5375 Constraint 177 352 4.5500 5.6875 11.3750 7.5331 Constraint 189 330 5.5289 6.9111 13.8222 7.5110 Constraint 47 506 5.1848 6.4810 12.9619 7.3540 Constraint 39 341 5.7502 7.1877 14.3754 7.1619 Constraint 144 352 6.1213 7.6516 15.3032 7.0559 Constraint 261 341 5.3233 6.6541 13.3083 7.0290 Constraint 47 323 4.3916 5.4895 10.9790 6.8935 Constraint 177 359 5.3115 6.6394 13.2789 6.8539 Constraint 199 453 3.9195 4.8994 9.7988 6.8473 Constraint 120 239 4.6501 5.8126 11.6253 6.8449 Constraint 247 323 4.2195 5.2744 10.5489 6.8301 Constraint 144 239 4.5057 5.6321 11.2642 6.8219 Constraint 22 359 4.7302 5.9127 11.8254 6.7852 Constraint 47 330 5.7541 7.1927 14.3853 6.7839 Constraint 461 525 6.0399 7.5499 15.0998 6.7032 Constraint 31 352 4.9964 6.2456 12.4911 6.6866 Constraint 11 384 4.4238 5.5298 11.0595 6.6828 Constraint 11 374 5.5559 6.9449 13.8898 6.6828 Constraint 81 277 5.4285 6.7857 13.5713 6.6701 Constraint 120 261 5.0621 6.3277 12.6553 6.6263 Constraint 239 323 5.8333 7.2916 14.5832 6.6022 Constraint 164 401 4.6227 5.7783 11.5567 6.5964 Constraint 39 330 4.1148 5.1435 10.2870 6.5793 Constraint 65 501 5.1619 6.4524 12.9048 6.5699 Constraint 169 401 5.3131 6.6413 13.2827 6.5503 Constraint 214 426 4.8013 6.0016 12.0032 6.4086 Constraint 352 426 5.5318 6.9147 13.8295 6.3949 Constraint 22 341 5.6654 7.0817 14.1635 6.2169 Constraint 39 323 5.5126 6.8907 13.7815 6.1822 Constraint 230 359 4.9707 6.2134 12.4268 6.1151 Constraint 73 277 4.4372 5.5465 11.0929 6.0949 Constraint 101 269 5.4133 6.7667 13.5333 6.0765 Constraint 239 367 5.0145 6.2681 12.5363 6.0366 Constraint 222 323 5.3201 6.6502 13.3003 5.8766 Constraint 199 323 5.5357 6.9196 13.8392 5.8581 Constraint 93 501 5.1960 6.4950 12.9900 5.8448 Constraint 230 401 4.8741 6.0926 12.1852 5.8446 Constraint 3 367 5.4953 6.8691 13.7383 5.8129 Constraint 58 290 5.2357 6.5446 13.0892 5.8024 Constraint 58 501 5.7560 7.1950 14.3900 5.7927 Constraint 230 323 4.7625 5.9531 11.9062 5.7216 Constraint 214 401 4.5372 5.6715 11.3431 5.7190 Constraint 222 374 5.8786 7.3483 14.6966 5.7064 Constraint 199 330 4.5255 5.6569 11.3138 5.6982 Constraint 65 493 5.6484 7.0606 14.1211 5.6854 Constraint 189 426 5.9671 7.4589 14.9177 5.6638 Constraint 58 277 4.4484 5.5605 11.1210 5.6273 Constraint 239 374 5.2946 6.6183 13.2365 5.5118 Constraint 93 277 5.3518 6.6897 13.3794 5.5021 Constraint 120 177 5.7897 7.2371 14.4742 5.4936 Constraint 189 323 4.2924 5.3655 10.7309 5.4922 Constraint 169 374 4.5070 5.6338 11.2676 5.4699 Constraint 120 501 5.8361 7.2951 14.5903 5.4611 Constraint 214 453 5.5946 6.9932 13.9864 5.4549 Constraint 58 261 5.0888 6.3611 12.7221 5.4156 Constraint 31 359 4.7048 5.8811 11.7621 5.4106 Constraint 22 352 5.4746 6.8433 13.6866 5.4038 Constraint 3 359 5.3969 6.7461 13.4922 5.4013 Constraint 58 323 5.5177 6.8972 13.7943 5.3857 Constraint 22 409 4.8009 6.0011 12.0021 5.3544 Constraint 144 207 4.2681 5.3351 10.6703 5.3519 Constraint 22 367 5.0955 6.3694 12.7388 5.3317 Constraint 199 426 5.5897 6.9872 13.9744 5.3205 Constraint 269 352 5.3660 6.7075 13.4150 5.3162 Constraint 222 401 4.7334 5.9168 11.8335 5.2435 Constraint 189 269 5.4846 6.8557 13.7114 5.2164 Constraint 65 277 4.4593 5.5742 11.1483 5.2133 Constraint 144 261 5.2438 6.5547 13.1094 5.1743 Constraint 239 330 4.8745 6.0931 12.1861 5.1594 Constraint 136 426 5.3031 6.6289 13.2578 5.1287 Constraint 189 315 5.3322 6.6652 13.3305 5.1017 Constraint 47 352 4.9866 6.2332 12.4665 5.0460 Constraint 101 247 4.6131 5.7663 11.5327 4.9719 Constraint 101 352 4.7160 5.8950 11.7900 4.9626 Constraint 58 255 5.1863 6.4828 12.9656 4.9348 Constraint 177 315 5.4207 6.7759 13.5518 4.9331 Constraint 101 341 5.9711 7.4639 14.9278 4.9303 Constraint 269 359 4.8128 6.0160 12.0319 4.9009 Constraint 47 120 5.3937 6.7421 13.4842 4.8641 Constraint 255 315 4.5010 5.6262 11.2524 4.8634 Constraint 81 330 4.8156 6.0194 12.0389 4.8017 Constraint 101 222 5.8158 7.2697 14.5394 4.7913 Constraint 31 426 4.8617 6.0772 12.1544 4.7812 Constraint 247 341 5.3739 6.7174 13.4349 4.7272 Constraint 247 315 5.0002 6.2503 12.5005 4.7253 Constraint 31 516 4.6866 5.8582 11.7165 4.7209 Constraint 296 453 5.2516 6.5644 13.1289 4.6993 Constraint 239 315 5.2160 6.5200 13.0400 4.6605 Constraint 93 506 5.0687 6.3359 12.6718 4.6588 Constraint 230 352 4.7385 5.9231 11.8462 4.5901 Constraint 199 269 4.8517 6.0646 12.1291 4.5898 Constraint 47 290 5.6501 7.0627 14.1253 4.5800 Constraint 239 359 4.1374 5.1718 10.3436 4.5429 Constraint 247 330 5.2743 6.5928 13.1857 4.5355 Constraint 31 506 4.9516 6.1895 12.3791 4.5242 Constraint 120 269 5.5468 6.9335 13.8671 4.5160 Constraint 31 367 5.3078 6.6348 13.2695 4.4403 Constraint 230 296 4.1529 5.1912 10.3824 4.3731 Constraint 3 484 5.6017 7.0021 14.0041 4.3625 Constraint 31 461 5.6902 7.1127 14.2255 4.3555 Constraint 115 453 5.4313 6.7892 13.5783 4.3467 Constraint 22 525 4.8811 6.1013 12.2027 4.3125 Constraint 101 189 4.8545 6.0681 12.1363 4.3118 Constraint 239 401 5.8411 7.3013 14.6026 4.2453 Constraint 164 374 6.2447 7.8059 15.6117 4.2151 Constraint 164 367 5.8047 7.2558 14.5116 4.2151 Constraint 58 315 5.1405 6.4256 12.8512 4.1971 Constraint 277 341 5.4211 6.7764 13.5529 4.1742 Constraint 239 341 4.3471 5.4339 10.8678 4.1611 Constraint 39 516 5.2399 6.5499 13.0997 4.1393 Constraint 11 409 4.1933 5.2416 10.4833 4.1007 Constraint 31 199 5.0363 6.2953 12.5907 4.0871 Constraint 58 308 5.8621 7.3277 14.6553 4.0435 Constraint 247 308 5.0837 6.3547 12.7093 4.0176 Constraint 144 255 5.4950 6.8687 13.7375 4.0140 Constraint 222 359 5.1071 6.3839 12.7678 3.9787 Constraint 359 426 4.9580 6.1974 12.3949 3.9440 Constraint 47 341 5.0549 6.3186 12.6372 3.9376 Constraint 296 426 4.7921 5.9901 11.9801 3.8907 Constraint 31 533 5.1123 6.3903 12.7806 3.8900 Constraint 296 374 6.0276 7.5345 15.0690 3.8818 Constraint 255 341 5.4818 6.8523 13.7045 3.8638 Constraint 81 269 5.3192 6.6490 13.2981 3.8590 Constraint 177 308 5.1093 6.3867 12.7733 3.8554 Constraint 230 374 5.3542 6.6928 13.3856 3.8539 Constraint 73 330 5.4290 6.7862 13.5725 3.8197 Constraint 65 308 5.0795 6.3493 12.6987 3.8101 Constraint 120 199 5.7352 7.1691 14.3381 3.7916 Constraint 47 277 5.4251 6.7814 13.5628 3.7912 Constraint 31 431 5.7226 7.1533 14.3065 3.7701 Constraint 189 261 4.6781 5.8477 11.6953 3.7185 Constraint 144 247 4.9623 6.2029 12.4058 3.7014 Constraint 47 461 5.1613 6.4516 12.9033 3.6888 Constraint 352 516 5.1515 6.4394 12.8788 3.6319 Constraint 109 239 6.0576 7.5720 15.1439 3.6304 Constraint 269 341 4.4754 5.5942 11.1884 3.5986 Constraint 261 352 4.9697 6.2121 12.4242 3.5936 Constraint 367 431 3.9982 4.9978 9.9955 3.5501 Constraint 81 255 5.8260 7.2825 14.5650 3.5355 Constraint 367 442 3.9894 4.9867 9.9734 3.5335 Constraint 207 426 5.0202 6.2752 12.5504 3.5297 Constraint 426 525 5.6815 7.1019 14.2038 3.5214 Constraint 199 315 4.4636 5.5795 11.1591 3.5113 Constraint 352 506 4.1770 5.2212 10.4424 3.4910 Constraint 47 315 5.7406 7.1758 14.3516 3.4799 Constraint 22 533 5.3075 6.6344 13.2687 3.4789 Constraint 65 255 4.6733 5.8416 11.6831 3.4633 Constraint 73 255 5.1995 6.4994 12.9987 3.3932 Constraint 315 506 5.7203 7.1504 14.3008 3.3617 Constraint 247 367 4.7334 5.9168 11.8336 3.3453 Constraint 39 426 5.0004 6.2505 12.5010 3.3379 Constraint 230 315 5.1720 6.4650 12.9299 3.3362 Constraint 39 207 4.6083 5.7604 11.5208 3.3253 Constraint 22 384 4.0719 5.0899 10.1798 3.3189 Constraint 39 359 5.0618 6.3273 12.6545 3.3094 Constraint 31 525 5.3360 6.6700 13.3400 3.3082 Constraint 22 516 5.6265 7.0331 14.0662 3.3044 Constraint 22 506 4.7596 5.9495 11.8990 3.3044 Constraint 207 453 5.0179 6.2724 12.5448 3.3025 Constraint 58 341 4.8211 6.0263 12.0527 3.2948 Constraint 31 409 5.4705 6.8382 13.6764 3.2854 Constraint 189 308 4.8106 6.0132 12.0265 3.2843 Constraint 65 341 5.7451 7.1814 14.3629 3.2719 Constraint 341 506 4.8977 6.1222 12.2443 3.2596 Constraint 65 247 5.6685 7.0856 14.1712 3.2583 Constraint 11 525 5.3923 6.7404 13.4807 3.2470 Constraint 93 261 6.0266 7.5332 15.0665 3.2454 Constraint 207 290 4.8491 6.0614 12.1227 3.2186 Constraint 164 308 5.8353 7.2941 14.5883 3.1672 Constraint 136 261 5.1699 6.4624 12.9247 3.1478 Constraint 277 352 4.6923 5.8653 11.7307 3.0999 Constraint 31 323 4.6234 5.7793 11.5586 3.0373 Constraint 39 409 5.9999 7.4999 14.9997 3.0151 Constraint 352 525 4.2824 5.3530 10.7059 3.0116 Constraint 247 401 4.4722 5.5903 11.1806 3.0042 Constraint 239 308 4.7641 5.9551 11.9101 2.9988 Constraint 384 544 6.2481 7.8101 15.6202 2.9954 Constraint 164 261 4.5210 5.6513 11.3025 2.9768 Constraint 144 214 4.5823 5.7279 11.4557 2.9700 Constraint 247 374 5.9634 7.4542 14.9085 2.9674 Constraint 255 367 5.5982 6.9977 13.9954 2.9569 Constraint 3 393 6.2502 7.8128 15.6256 2.9513 Constraint 58 222 4.9956 6.2445 12.4890 2.9310 Constraint 152 296 5.8058 7.2573 14.5145 2.9046 Constraint 177 269 5.2181 6.5226 13.0453 2.8796 Constraint 101 453 5.3892 6.7365 13.4730 2.8793 Constraint 207 323 5.3541 6.6926 13.3852 2.8692 Constraint 22 461 5.4564 6.8205 13.6410 2.8535 Constraint 296 401 4.0148 5.0185 10.0369 2.8445 Constraint 39 544 3.9007 4.8759 9.7518 2.8405 Constraint 214 290 5.5460 6.9325 13.8651 2.7971 Constraint 230 308 5.4464 6.8080 13.6160 2.7711 Constraint 39 431 5.7779 7.2223 14.4447 2.7689 Constraint 39 367 5.0927 6.3659 12.7318 2.7629 Constraint 341 516 4.2879 5.3599 10.7198 2.7522 Constraint 120 277 4.9042 6.1302 12.2605 2.7466 Constraint 22 374 5.9511 7.4389 14.8778 2.7433 Constraint 189 277 5.3360 6.6700 13.3399 2.7402 Constraint 101 214 5.5981 6.9976 13.9952 2.7347 Constraint 136 247 5.5531 6.9414 13.8828 2.7337 Constraint 261 359 5.8106 7.2633 14.5266 2.7170 Constraint 199 296 5.4987 6.8734 13.7468 2.7168 Constraint 11 401 6.1430 7.6788 15.3575 2.6961 Constraint 230 426 5.0893 6.3616 12.7232 2.6938 Constraint 247 352 4.5644 5.7055 11.4109 2.6890 Constraint 109 247 5.3582 6.6978 13.3956 2.6845 Constraint 269 330 5.2325 6.5406 13.0811 2.6788 Constraint 31 136 5.1641 6.4551 12.9103 2.6682 Constraint 199 277 5.2545 6.5682 13.1364 2.6601 Constraint 269 367 5.5982 6.9978 13.9955 2.6553 Constraint 207 367 5.4098 6.7623 13.5245 2.6449 Constraint 65 330 4.4289 5.5361 11.0722 2.6412 Constraint 73 261 5.0725 6.3407 12.6814 2.6348 Constraint 222 352 5.4666 6.8332 13.6664 2.6232 Constraint 81 261 5.4528 6.8160 13.6320 2.6139 Constraint 101 461 5.3894 6.7368 13.4736 2.6029 Constraint 81 315 5.4140 6.7675 13.5351 2.5943 Constraint 3 115 4.0893 5.1116 10.2233 2.5873 Constraint 207 461 5.2497 6.5621 13.1243 2.5854 Constraint 120 247 5.2652 6.5814 13.1629 2.5765 Constraint 255 352 4.7270 5.9088 11.8175 2.5750 Constraint 58 239 5.2542 6.5677 13.1355 2.5474 Constraint 177 493 5.1687 6.4608 12.9217 2.5446 Constraint 359 506 4.6030 5.7538 11.5075 2.5392 Constraint 65 359 4.9123 6.1403 12.2807 2.5359 Constraint 277 359 5.6668 7.0835 14.1671 2.5355 Constraint 120 207 5.3627 6.7033 13.4066 2.5315 Constraint 214 323 5.6950 7.1187 14.2374 2.5264 Constraint 199 484 4.4129 5.5161 11.0323 2.5160 Constraint 109 255 5.9409 7.4261 14.8522 2.5098 Constraint 22 501 5.3994 6.7492 13.4984 2.5095 Constraint 22 493 4.7448 5.9310 11.8619 2.5095 Constraint 136 207 5.4924 6.8655 13.7309 2.4931 Constraint 65 239 4.8245 6.0306 12.0612 2.4904 Constraint 189 484 4.9688 6.2110 12.4220 2.4825 Constraint 11 544 5.6025 7.0031 14.0061 2.4783 Constraint 11 533 4.7954 5.9942 11.9885 2.4783 Constraint 3 550 5.6631 7.0789 14.1577 2.4783 Constraint 65 261 4.5884 5.7355 11.4710 2.4782 Constraint 261 409 4.8242 6.0302 12.0605 2.4462 Constraint 22 426 5.4647 6.8309 13.6617 2.4433 Constraint 31 120 5.5234 6.9042 13.8085 2.4315 Constraint 101 199 5.1765 6.4707 12.9414 2.4245 Constraint 352 461 5.7956 7.2445 14.4891 2.4229 Constraint 101 296 5.2858 6.6072 13.2145 2.4048 Constraint 47 558 5.7135 7.1418 14.2837 2.4035 Constraint 11 516 4.4431 5.5539 11.1078 2.4034 Constraint 261 484 5.0625 6.3282 12.6563 2.4006 Constraint 22 431 5.6170 7.0212 14.0425 2.3854 Constraint 261 417 5.0043 6.2554 12.5108 2.3640 Constraint 31 330 5.8665 7.3332 14.6663 2.3352 Constraint 144 230 4.7548 5.9435 11.8869 2.3281 Constraint 359 516 4.8886 6.1107 12.2215 2.3230 Constraint 58 230 5.6916 7.1145 14.2291 2.3083 Constraint 39 533 5.4403 6.8004 13.6009 2.2978 Constraint 120 214 5.9373 7.4217 14.8433 2.2973 Constraint 93 239 5.1465 6.4331 12.8663 2.2765 Constraint 3 501 5.7187 7.1484 14.2967 2.2711 Constraint 3 493 4.6769 5.8462 11.6923 2.2711 Constraint 222 426 4.5372 5.6715 11.3431 2.2691 Constraint 73 501 5.0619 6.3273 12.6547 2.2684 Constraint 22 544 5.2256 6.5320 13.0640 2.2657 Constraint 247 426 4.7659 5.9574 11.9148 2.2585 Constraint 47 308 5.3051 6.6314 13.2628 2.2576 Constraint 39 199 5.2888 6.6110 13.2220 2.2572 Constraint 39 214 5.4880 6.8599 13.7199 2.2511 Constraint 47 516 5.5652 6.9565 13.9131 2.2476 Constraint 31 189 5.6561 7.0701 14.1402 2.2416 Constraint 101 315 5.2257 6.5321 13.0642 2.2359 Constraint 277 493 5.4762 6.8452 13.6905 2.2323 Constraint 239 352 5.1187 6.3983 12.7967 2.2282 Constraint 341 426 4.4040 5.5050 11.0100 2.2236 Constraint 31 214 5.1714 6.4643 12.9286 2.2079 Constraint 199 461 5.0349 6.2936 12.5873 2.2054 Constraint 308 401 5.0530 6.3163 12.6326 2.2028 Constraint 47 214 4.2892 5.3614 10.7229 2.1992 Constraint 247 359 4.7098 5.8873 11.7745 2.1807 Constraint 189 374 5.7139 7.1424 14.2848 2.1719 Constraint 277 484 5.0909 6.3636 12.7271 2.1642 Constraint 144 296 5.2478 6.5597 13.1195 2.1639 Constraint 269 493 6.0617 7.5771 15.1543 2.1638 Constraint 144 269 5.0648 6.3310 12.6619 2.1637 Constraint 120 255 3.7538 4.6922 9.3844 2.1597 Constraint 359 525 5.0003 6.2503 12.5007 2.1438 Constraint 3 169 4.2304 5.2880 10.5761 2.1338 Constraint 93 269 5.3593 6.6992 13.3984 2.1301 Constraint 239 384 5.1119 6.3899 12.7798 2.1289 Constraint 115 239 4.8552 6.0690 12.1381 2.1281 Constraint 65 544 5.3184 6.6480 13.2961 2.1190 Constraint 115 214 5.2842 6.6052 13.2104 2.1081 Constraint 11 506 6.0914 7.6143 15.2285 2.0913 Constraint 11 199 5.4880 6.8600 13.7200 2.0831 Constraint 115 247 4.4510 5.5637 11.1274 2.0793 Constraint 101 308 4.4649 5.5811 11.1622 2.0793 Constraint 144 315 5.7868 7.2335 14.4670 2.0763 Constraint 109 315 6.0194 7.5242 15.0485 2.0500 Constraint 58 269 5.5143 6.8928 13.7856 2.0365 Constraint 261 367 5.0732 6.3415 12.6831 2.0361 Constraint 323 401 5.8222 7.2777 14.5554 2.0319 Constraint 169 308 5.3396 6.6745 13.3491 2.0197 Constraint 81 323 4.6609 5.8261 11.6522 2.0196 Constraint 65 230 4.8253 6.0316 12.0632 2.0195 Constraint 374 525 4.5892 5.7365 11.4729 2.0100 Constraint 367 533 5.3708 6.7135 13.4270 1.9968 Constraint 65 269 5.0645 6.3307 12.6613 1.9839 Constraint 330 506 5.4081 6.7601 13.5202 1.9758 Constraint 136 296 5.0753 6.3441 12.6882 1.9720 Constraint 39 558 4.6245 5.7807 11.5614 1.9679 Constraint 39 550 5.1173 6.3966 12.7933 1.9679 Constraint 222 290 4.9376 6.1720 12.3439 1.9679 Constraint 177 323 5.4253 6.7816 13.5632 1.9633 Constraint 169 493 5.6847 7.1059 14.2118 1.9545 Constraint 169 484 5.8978 7.3722 14.7444 1.9545 Constraint 323 484 5.4442 6.8053 13.6105 1.9514 Constraint 323 506 6.2304 7.7880 15.5759 1.9504 Constraint 39 144 5.0799 6.3498 12.6997 1.9413 Constraint 65 525 4.7163 5.8954 11.7908 1.9354 Constraint 58 550 4.9227 6.1534 12.3068 1.9332 Constraint 31 501 5.6820 7.1025 14.2050 1.9236 Constraint 214 315 5.5445 6.9306 13.8612 1.9220 Constraint 230 453 4.6858 5.8573 11.7145 1.9100 Constraint 308 409 5.4090 6.7613 13.5225 1.9015 Constraint 31 101 4.0660 5.0825 10.1649 1.8964 Constraint 101 484 4.4806 5.6007 11.2015 1.8917 Constraint 136 214 4.7716 5.9645 11.9289 1.8819 Constraint 65 323 4.4968 5.6210 11.2420 1.8816 Constraint 177 484 5.9171 7.3964 14.7928 1.8769 Constraint 73 239 4.7362 5.9203 11.8406 1.8745 Constraint 290 409 5.2684 6.5855 13.1710 1.8719 Constraint 58 296 5.7888 7.2360 14.4719 1.8715 Constraint 109 290 5.7755 7.2194 14.4389 1.8697 Constraint 93 255 4.9143 6.1429 12.2858 1.8675 Constraint 93 359 6.0798 7.5998 15.1996 1.8642 Constraint 308 426 3.3577 4.1971 8.3942 1.8628 Constraint 58 506 5.8717 7.3396 14.6792 1.8613 Constraint 58 247 4.8302 6.0377 12.0754 1.8597 Constraint 131 426 5.0428 6.3036 12.6071 1.8561 Constraint 73 247 3.8879 4.8598 9.7197 1.8547 Constraint 47 207 5.6321 7.0402 14.0803 1.8540 Constraint 177 296 4.7788 5.9735 11.9469 1.8537 Constraint 47 222 5.3429 6.6787 13.3573 1.8466 Constraint 367 516 5.8817 7.3522 14.7044 1.8456 Constraint 164 230 4.6746 5.8433 11.6866 1.8445 Constraint 189 296 4.6572 5.8215 11.6430 1.8430 Constraint 136 308 4.6865 5.8581 11.7162 1.8393 Constraint 31 493 4.1601 5.2002 10.4004 1.8379 Constraint 3 177 3.7316 4.6646 9.3291 1.8343 Constraint 73 384 5.1561 6.4451 12.8903 1.8296 Constraint 290 367 6.2218 7.7772 15.5545 1.8287 Constraint 31 544 5.0349 6.2937 12.5874 1.8261 Constraint 73 308 6.2556 7.8195 15.6390 1.8220 Constraint 177 461 5.5266 6.9082 13.8164 1.8150 Constraint 261 401 4.6109 5.7636 11.5272 1.8106 Constraint 367 525 5.3183 6.6478 13.2956 1.8104 Constraint 222 367 5.3654 6.7068 13.4136 1.8087 Constraint 47 269 5.3343 6.6679 13.3358 1.7965 Constraint 73 269 5.7256 7.1569 14.3139 1.7961 Constraint 47 230 4.0492 5.0614 10.1229 1.7946 Constraint 86 269 5.9874 7.4842 14.9685 1.7743 Constraint 290 426 3.3315 4.1644 8.3287 1.7649 Constraint 39 308 5.0661 6.3326 12.6653 1.7613 Constraint 189 453 5.1825 6.4781 12.9563 1.7544 Constraint 47 544 5.1923 6.4903 12.9807 1.7440 Constraint 169 393 5.8212 7.2765 14.5529 1.7425 Constraint 222 431 5.1278 6.4097 12.8194 1.7403 Constraint 73 493 4.8973 6.1216 12.2432 1.7326 Constraint 65 476 4.3282 5.4103 10.8206 1.7247 Constraint 11 189 5.7179 7.1474 14.2949 1.7179 Constraint 109 308 4.8197 6.0247 12.0494 1.7130 Constraint 101 290 4.3867 5.4834 10.9667 1.7092 Constraint 115 222 5.2377 6.5471 13.0942 1.6944 Constraint 255 374 5.1036 6.3795 12.7590 1.6907 Constraint 277 453 4.5207 5.6509 11.3018 1.6897 Constraint 261 426 4.5155 5.6444 11.2888 1.6891 Constraint 115 277 3.9746 4.9683 9.9366 1.6859 Constraint 374 533 4.3846 5.4808 10.9616 1.6838 Constraint 207 315 4.4790 5.5987 11.1975 1.6757 Constraint 177 330 4.6937 5.8671 11.7342 1.6749 Constraint 177 261 5.6944 7.1180 14.2360 1.6737 Constraint 144 308 5.2773 6.5966 13.1932 1.6688 Constraint 144 484 5.6824 7.1031 14.2061 1.6635 Constraint 81 359 4.9144 6.1429 12.2859 1.6561 Constraint 277 461 3.7422 4.6777 9.3554 1.6557 Constraint 277 426 5.3050 6.6312 13.2624 1.6557 Constraint 323 426 4.7423 5.9278 11.8556 1.6533 Constraint 86 330 4.9143 6.1429 12.2858 1.6512 Constraint 239 409 4.1884 5.2355 10.4710 1.6470 Constraint 93 247 5.6893 7.1116 14.2232 1.6465 Constraint 22 189 3.6606 4.5758 9.1515 1.6446 Constraint 214 461 5.3937 6.7421 13.4842 1.6439 Constraint 39 269 5.1426 6.4282 12.8564 1.6423 Constraint 261 323 4.2399 5.2999 10.5997 1.6354 Constraint 115 207 5.3707 6.7134 13.4267 1.6343 Constraint 3 516 5.5581 6.9476 13.8952 1.6335 Constraint 269 525 4.9711 6.2139 12.4277 1.6299 Constraint 109 296 5.2225 6.5281 13.0561 1.6293 Constraint 22 177 5.2650 6.5812 13.1625 1.6244 Constraint 73 544 5.4523 6.8154 13.6307 1.6185 Constraint 341 533 5.0271 6.2838 12.5677 1.6137 Constraint 31 269 5.2129 6.5161 13.0323 1.6124 Constraint 315 426 5.0607 6.3258 12.6517 1.6122 Constraint 73 169 5.0579 6.3224 12.6448 1.6121 Constraint 39 189 4.4321 5.5401 11.0803 1.6116 Constraint 207 308 5.1404 6.4255 12.8510 1.6098 Constraint 73 290 5.4266 6.7833 13.5666 1.6059 Constraint 177 277 4.8322 6.0402 12.0805 1.6021 Constraint 58 207 4.4185 5.5231 11.0462 1.6016 Constraint 199 290 4.6998 5.8747 11.7494 1.5975 Constraint 58 544 4.3633 5.4542 10.9084 1.5956 Constraint 384 525 6.0163 7.5204 15.0407 1.5847 Constraint 115 296 4.0476 5.0595 10.1189 1.5838 Constraint 58 214 5.8773 7.3466 14.6932 1.5836 Constraint 65 290 5.2442 6.5552 13.1104 1.5772 Constraint 359 461 5.7473 7.1842 14.3684 1.5768 Constraint 120 308 4.8079 6.0099 12.0198 1.5703 Constraint 214 367 5.3804 6.7255 13.4510 1.5690 Constraint 177 384 4.9823 6.2279 12.4558 1.5637 Constraint 164 461 4.6261 5.7826 11.5652 1.5627 Constraint 73 323 5.7175 7.1469 14.2938 1.5600 Constraint 81 341 4.6382 5.7978 11.5956 1.5395 Constraint 120 315 5.7837 7.2296 14.4593 1.5391 Constraint 22 214 3.9091 4.8863 9.7726 1.5386 Constraint 47 296 5.0448 6.3060 12.6120 1.5338 Constraint 214 296 5.2505 6.5631 13.1261 1.5327 Constraint 247 453 5.5072 6.8840 13.7679 1.5300 Constraint 255 384 4.6735 5.8419 11.6837 1.5283 Constraint 31 109 6.0572 7.5715 15.1431 1.5277 Constraint 199 401 4.8159 6.0199 12.0397 1.5226 Constraint 65 177 5.0042 6.2553 12.5106 1.5219 Constraint 81 189 5.1744 6.4680 12.9360 1.5213 Constraint 101 323 5.3674 6.7092 13.4184 1.5196 Constraint 93 323 5.7137 7.1422 14.2844 1.5190 Constraint 101 476 5.8259 7.2824 14.5648 1.5159 Constraint 73 177 4.4236 5.5295 11.0589 1.5137 Constraint 47 261 4.8169 6.0211 12.0422 1.5134 Constraint 81 296 6.0686 7.5858 15.1715 1.5125 Constraint 86 261 3.5840 4.4800 8.9600 1.4993 Constraint 58 384 5.0161 6.2701 12.5401 1.4978 Constraint 3 461 5.2988 6.6235 13.2469 1.4970 Constraint 31 177 4.6656 5.8320 11.6640 1.4938 Constraint 58 164 4.8559 6.0699 12.1398 1.4933 Constraint 290 401 5.1969 6.4961 12.9922 1.4931 Constraint 115 290 5.1734 6.4667 12.9334 1.4899 Constraint 207 277 5.4808 6.8510 13.7020 1.4838 Constraint 73 341 5.0634 6.3292 12.6584 1.4822 Constraint 290 453 4.1356 5.1695 10.3391 1.4604 Constraint 109 177 5.8821 7.3526 14.7052 1.4572 Constraint 207 401 5.3066 6.6333 13.2666 1.4564 Constraint 255 401 5.8197 7.2746 14.5492 1.4514 Constraint 269 409 4.0136 5.0170 10.0341 1.4479 Constraint 239 417 5.0299 6.2874 12.5748 1.4475 Constraint 47 177 5.7013 7.1266 14.2532 1.4308 Constraint 39 525 4.5717 5.7146 11.4291 1.4259 Constraint 222 315 5.4929 6.8662 13.7324 1.4238 Constraint 136 290 5.7957 7.2446 14.4893 1.4225 Constraint 323 453 5.0558 6.3198 12.6396 1.4183 Constraint 199 476 5.7141 7.1427 14.2853 1.4143 Constraint 199 308 4.7181 5.8976 11.7952 1.4139 Constraint 214 374 4.3199 5.3999 10.7998 1.4135 Constraint 144 290 4.9421 6.1776 12.3553 1.4129 Constraint 31 207 5.3444 6.6805 13.3611 1.4099 Constraint 374 516 5.7315 7.1644 14.3288 1.4095 Constraint 47 136 5.0609 6.3262 12.6524 1.4094 Constraint 115 230 4.6243 5.7804 11.5608 1.4083 Constraint 330 516 4.9229 6.1536 12.3072 1.4080 Constraint 86 341 4.7586 5.9483 11.8966 1.4019 Constraint 255 409 5.5328 6.9159 13.8319 1.4009 Constraint 199 374 5.5352 6.9189 13.8379 1.3977 Constraint 22 199 6.0267 7.5334 15.0668 1.3952 Constraint 255 359 4.5732 5.7165 11.4331 1.3948 Constraint 47 409 5.8474 7.3092 14.6185 1.3835 Constraint 47 426 5.7081 7.1351 14.2702 1.3805 Constraint 11 550 5.8904 7.3630 14.7260 1.3751 Constraint 177 476 4.7289 5.9112 11.8223 1.3585 Constraint 290 374 5.6757 7.0946 14.1892 1.3581 Constraint 308 506 5.6875 7.1093 14.2187 1.3546 Constraint 31 453 4.1774 5.2218 10.4436 1.3524 Constraint 199 417 4.0362 5.0453 10.0905 1.3519 Constraint 131 308 5.5386 6.9233 13.8465 1.3491 Constraint 65 352 5.4755 6.8443 13.6886 1.3431 Constraint 86 323 5.5802 6.9753 13.9506 1.3424 Constraint 73 230 5.4693 6.8366 13.6731 1.3392 Constraint 296 461 4.1215 5.1519 10.3038 1.3382 Constraint 261 374 5.1231 6.4038 12.8077 1.3360 Constraint 341 525 5.8544 7.3180 14.6360 1.3315 Constraint 214 409 5.6559 7.0698 14.1397 1.3291 Constraint 261 493 5.4618 6.8272 13.6545 1.3283 Constraint 164 296 4.1202 5.1503 10.3006 1.3230 Constraint 109 359 5.5348 6.9185 13.8370 1.3220 Constraint 152 308 5.3965 6.7456 13.4912 1.3219 Constraint 81 230 5.2471 6.5589 13.1179 1.3218 Constraint 86 255 5.6846 7.1058 14.2116 1.3216 Constraint 65 558 6.1876 7.7345 15.4690 1.3216 Constraint 58 516 3.8517 4.8147 9.6293 1.3206 Constraint 11 341 5.3773 6.7216 13.4431 1.3183 Constraint 101 359 5.2304 6.5380 13.0759 1.3167 Constraint 73 131 4.6502 5.8127 11.6255 1.3139 Constraint 120 290 4.3937 5.4922 10.9843 1.3122 Constraint 199 493 4.8141 6.0176 12.0352 1.3084 Constraint 296 393 5.3976 6.7470 13.4939 1.3014 Constraint 120 323 5.2466 6.5582 13.1164 1.3005 Constraint 3 164 4.0203 5.0254 10.0508 1.2973 Constraint 93 207 4.8251 6.0314 12.0628 1.2969 Constraint 81 222 5.3390 6.6737 13.3475 1.2937 Constraint 169 384 4.3037 5.3796 10.7593 1.2884 Constraint 115 189 5.6601 7.0751 14.1502 1.2853 Constraint 261 431 4.2815 5.3519 10.7038 1.2840 Constraint 367 544 5.1151 6.3939 12.7877 1.2838 Constraint 39 136 4.4259 5.5324 11.0649 1.2795 Constraint 323 525 5.8808 7.3510 14.7020 1.2740 Constraint 109 261 5.5236 6.9045 13.8091 1.2730 Constraint 39 453 5.9094 7.3868 14.7736 1.2722 Constraint 367 506 3.8033 4.7541 9.5083 1.2684 Constraint 73 136 5.6393 7.0491 14.0982 1.2672 Constraint 65 222 5.1442 6.4302 12.8605 1.2670 Constraint 81 177 5.2473 6.5591 13.1182 1.2616 Constraint 3 144 5.6980 7.1225 14.2450 1.2566 Constraint 3 506 4.1861 5.2326 10.4651 1.2548 Constraint 3 352 5.5832 6.9789 13.9579 1.2548 Constraint 47 453 4.9718 6.2148 12.4296 1.2509 Constraint 417 484 5.3147 6.6434 13.2868 1.2478 Constraint 164 255 4.6603 5.8254 11.6508 1.2468 Constraint 81 290 5.1629 6.4536 12.9071 1.2466 Constraint 73 426 4.7700 5.9625 11.9250 1.2465 Constraint 93 177 5.8067 7.2584 14.5168 1.2449 Constraint 136 401 5.5102 6.8878 13.7755 1.2446 Constraint 207 296 5.1199 6.3999 12.7999 1.2374 Constraint 144 277 5.1056 6.3821 12.7641 1.2253 Constraint 58 558 4.3237 5.4046 10.8091 1.2184 Constraint 3 199 5.2570 6.5712 13.1424 1.2182 Constraint 359 501 4.7867 5.9833 11.9666 1.2151 Constraint 11 352 5.6813 7.1017 14.2033 1.2132 Constraint 65 533 5.4549 6.8187 13.6374 1.2068 Constraint 207 417 5.5654 6.9568 13.9135 1.2064 Constraint 374 506 5.9791 7.4738 14.9477 1.2057 Constraint 230 384 5.0247 6.2809 12.5618 1.2005 Constraint 296 484 4.8639 6.0798 12.1596 1.1976 Constraint 164 323 5.2111 6.5139 13.0278 1.1972 Constraint 296 493 5.3403 6.6754 13.3507 1.1956 Constraint 86 199 4.6806 5.8508 11.7015 1.1951 Constraint 199 442 6.3372 7.9215 15.8429 1.1946 Constraint 230 409 3.6961 4.6201 9.2403 1.1914 Constraint 269 401 4.5010 5.6263 11.2525 1.1856 Constraint 93 199 5.2404 6.5505 13.1010 1.1839 Constraint 131 261 5.1042 6.3803 12.7605 1.1838 Constraint 255 417 5.3379 6.6724 13.3448 1.1818 Constraint 277 516 6.1468 7.6835 15.3670 1.1814 Constraint 31 169 4.9189 6.1487 12.2973 1.1790 Constraint 177 247 5.0033 6.2541 12.5082 1.1781 Constraint 290 393 3.8257 4.7822 9.5643 1.1778 Constraint 22 93 6.1966 7.7457 15.4914 1.1761 Constraint 22 109 3.9121 4.8901 9.7802 1.1752 Constraint 11 101 5.8488 7.3110 14.6221 1.1739 Constraint 39 290 5.1803 6.4754 12.9508 1.1701 Constraint 31 308 4.6293 5.7866 11.5731 1.1701 Constraint 261 384 5.8461 7.3076 14.6153 1.1604 Constraint 136 417 5.6506 7.0632 14.1265 1.1596 Constraint 81 199 5.2961 6.6202 13.2403 1.1558 Constraint 189 401 3.5576 4.4470 8.8939 1.1538 Constraint 374 501 4.5008 5.6260 11.2521 1.1507 Constraint 115 315 5.1458 6.4323 12.8645 1.1503 Constraint 31 315 5.6829 7.1036 14.2072 1.1491 Constraint 22 169 5.6928 7.1160 14.2321 1.1475 Constraint 461 533 5.2114 6.5143 13.0286 1.1380 Constraint 401 476 6.1928 7.7411 15.4821 1.1370 Constraint 269 417 5.4286 6.7857 13.5715 1.1315 Constraint 65 484 4.5427 5.6784 11.3568 1.1311 Constraint 169 277 5.0823 6.3529 12.7059 1.1290 Constraint 39 277 4.4743 5.5929 11.1858 1.1199 Constraint 120 296 5.1584 6.4480 12.8960 1.1172 Constraint 3 409 4.0545 5.0681 10.1362 1.1142 Constraint 169 330 5.3910 6.7388 13.4775 1.1115 Constraint 31 277 5.1003 6.3753 12.7507 1.1043 Constraint 152 431 6.0105 7.5131 15.0262 1.1033 Constraint 352 493 5.0285 6.2856 12.5712 1.1020 Constraint 73 484 5.6312 7.0390 14.0781 1.1013 Constraint 47 255 4.9506 6.1883 12.3766 1.0998 Constraint 308 493 5.2668 6.5835 13.1671 1.0991 Constraint 255 323 5.6448 7.0560 14.1120 1.0988 Constraint 315 533 5.5356 6.9195 13.8391 1.0987 Constraint 39 115 5.2905 6.6131 13.2262 1.0956 Constraint 214 442 5.5052 6.8814 13.7629 1.0919 Constraint 3 189 6.0037 7.5047 15.0093 1.0918 Constraint 169 323 4.8050 6.0063 12.0126 1.0916 Constraint 120 453 4.5859 5.7324 11.4648 1.0857 Constraint 115 308 5.7566 7.1957 14.3914 1.0823 Constraint 367 501 5.6963 7.1204 14.2408 1.0811 Constraint 296 384 4.4929 5.6161 11.2322 1.0796 Constraint 136 409 4.9094 6.1368 12.2736 1.0792 Constraint 131 493 5.6590 7.0738 14.1476 1.0780 Constraint 11 109 5.4848 6.8560 13.7120 1.0758 Constraint 189 290 5.8691 7.3363 14.6727 1.0739 Constraint 189 476 5.9222 7.4028 14.8056 1.0683 Constraint 22 101 5.7810 7.2262 14.4524 1.0674 Constraint 73 164 4.5996 5.7495 11.4991 1.0655 Constraint 152 222 5.5791 6.9738 13.9476 1.0632 Constraint 152 247 5.3459 6.6824 13.3648 1.0576 Constraint 136 199 5.6468 7.0585 14.1170 1.0518 Constraint 384 506 5.4849 6.8561 13.7122 1.0501 Constraint 189 493 5.6968 7.1210 14.2420 1.0498 Constraint 323 431 5.1098 6.3873 12.7746 1.0494 Constraint 169 426 4.5442 5.6803 11.3605 1.0491 Constraint 409 484 5.7869 7.2337 14.4673 1.0488 Constraint 277 384 6.0494 7.5618 15.1235 1.0484 Constraint 11 115 4.3794 5.4743 10.9486 1.0479 Constraint 31 290 5.4981 6.8726 13.7452 1.0471 Constraint 58 169 5.0241 6.2801 12.5602 1.0464 Constraint 277 393 5.8535 7.3169 14.6338 1.0461 Constraint 109 323 5.6571 7.0714 14.1428 1.0448 Constraint 81 544 3.3833 4.2291 8.4583 1.0448 Constraint 341 453 4.8401 6.0502 12.1004 1.0447 Constraint 152 277 5.4544 6.8180 13.6360 1.0446 Constraint 93 315 4.8964 6.1205 12.2410 1.0415 Constraint 315 461 5.6762 7.0952 14.1905 1.0399 Constraint 93 341 4.8196 6.0245 12.0490 1.0383 Constraint 374 493 5.7889 7.2361 14.4722 1.0370 Constraint 290 384 6.0361 7.5451 15.0902 1.0340 Constraint 247 516 4.8215 6.0269 12.0537 1.0311 Constraint 409 476 4.8346 6.0432 12.0864 1.0261 Constraint 65 516 5.4905 6.8631 13.7262 1.0244 Constraint 22 115 5.8267 7.2834 14.5668 1.0242 Constraint 247 525 4.0381 5.0477 10.0954 1.0213 Constraint 323 493 5.2520 6.5651 13.1301 1.0182 Constraint 81 352 5.1542 6.4427 12.8855 1.0181 Constraint 384 493 3.9846 4.9808 9.9615 1.0161 Constraint 222 442 4.8489 6.0611 12.1222 1.0156 Constraint 199 501 5.2861 6.6077 13.2154 1.0131 Constraint 308 442 5.5740 6.9675 13.9350 1.0081 Constraint 86 352 5.3912 6.7390 13.4780 1.0054 Constraint 152 214 3.8444 4.8056 9.6111 1.0023 Constraint 152 461 4.2910 5.3638 10.7275 1.0011 Constraint 152 367 5.7466 7.1832 14.3664 1.0011 Constraint 81 550 4.8390 6.0487 12.0975 0.9991 Constraint 359 453 4.1596 5.1995 10.3989 0.9949 Constraint 86 315 5.5450 6.9313 13.8625 0.9946 Constraint 39 261 5.5106 6.8882 13.7764 0.9933 Constraint 222 409 4.7121 5.8902 11.7804 0.9933 Constraint 315 431 5.2326 6.5408 13.0815 0.9869 Constraint 11 169 3.9398 4.9247 9.8495 0.9862 Constraint 308 533 5.5639 6.9549 13.9097 0.9857 Constraint 47 550 4.4468 5.5586 11.1171 0.9842 Constraint 401 484 4.6682 5.8352 11.6704 0.9820 Constraint 393 484 5.9397 7.4247 14.8493 0.9820 Constraint 393 476 6.3674 7.9593 15.9186 0.9820 Constraint 384 501 6.3637 7.9546 15.9092 0.9820 Constraint 384 484 6.0581 7.5726 15.1452 0.9820 Constraint 277 401 3.7379 4.6723 9.3447 0.9820 Constraint 131 409 3.6187 4.5234 9.0468 0.9791 Constraint 86 177 4.3219 5.4023 10.8047 0.9781 Constraint 315 442 5.4549 6.8186 13.6373 0.9757 Constraint 81 453 5.1915 6.4894 12.9788 0.9749 Constraint 239 393 4.4490 5.5613 11.1226 0.9717 Constraint 115 409 5.8623 7.3278 14.6556 0.9714 Constraint 352 550 5.8690 7.3362 14.6724 0.9687 Constraint 65 136 5.0293 6.2867 12.5733 0.9682 Constraint 131 290 5.8223 7.2779 14.5558 0.9680 Constraint 93 164 4.3732 5.4665 10.9330 0.9625 Constraint 47 533 5.1415 6.4269 12.8538 0.9596 Constraint 93 222 5.5406 6.9258 13.8516 0.9584 Constraint 86 247 5.7143 7.1428 14.2857 0.9573 Constraint 31 442 5.4984 6.8729 13.7459 0.9571 Constraint 58 189 5.8786 7.3482 14.6964 0.9509 Constraint 86 207 5.3403 6.6754 13.3507 0.9503 Constraint 189 501 3.7937 4.7422 9.4844 0.9496 Constraint 169 296 5.1307 6.4134 12.8267 0.9461 Constraint 152 261 6.0837 7.6047 15.2093 0.9440 Constraint 341 550 5.3858 6.7323 13.4645 0.9400 Constraint 136 323 4.9556 6.1945 12.3891 0.9372 Constraint 189 461 6.0467 7.5584 15.1167 0.9345 Constraint 93 426 5.6284 7.0355 14.0710 0.9341 Constraint 58 525 4.2189 5.2736 10.5473 0.9314 Constraint 73 476 5.2243 6.5304 13.0608 0.9311 Constraint 152 493 5.9008 7.3760 14.7519 0.9279 Constraint 93 384 5.1308 6.4135 12.8271 0.9264 Constraint 109 189 3.9289 4.9112 9.8223 0.9264 Constraint 31 261 5.0111 6.2639 12.5278 0.9253 Constraint 31 152 4.5561 5.6951 11.3902 0.9251 Constraint 73 367 5.3881 6.7352 13.4703 0.9243 Constraint 131 393 4.7389 5.9237 11.8473 0.9237 Constraint 65 550 3.8810 4.8513 9.7026 0.9220 Constraint 115 255 5.5278 6.9097 13.8194 0.9178 Constraint 31 255 5.4928 6.8660 13.7320 0.9135 Constraint 11 431 4.4420 5.5525 11.1051 0.9123 Constraint 65 169 4.8045 6.0056 12.0112 0.9106 Constraint 247 501 4.7381 5.9226 11.8452 0.9103 Constraint 136 330 5.1905 6.4881 12.9762 0.9076 Constraint 11 426 4.0232 5.0290 10.0581 0.9076 Constraint 341 501 4.6521 5.8151 11.6303 0.9050 Constraint 3 544 4.6293 5.7866 11.5732 0.9049 Constraint 131 296 4.6369 5.7962 11.5924 0.9033 Constraint 144 401 5.8728 7.3409 14.6819 0.9013 Constraint 93 308 5.8790 7.3487 14.6975 0.8969 Constraint 115 199 4.5208 5.6510 11.3020 0.8963 Constraint 73 461 5.4246 6.7807 13.5614 0.8926 Constraint 144 323 5.6793 7.0991 14.1982 0.8916 Constraint 341 484 5.2513 6.5641 13.1282 0.8914 Constraint 144 384 5.8714 7.3393 14.6786 0.8899 Constraint 239 426 5.0060 6.2575 12.5150 0.8826 Constraint 81 558 4.4482 5.5602 11.1205 0.8816 Constraint 11 493 5.6267 7.0334 14.0668 0.8816 Constraint 352 544 4.8917 6.1146 12.2292 0.8769 Constraint 169 476 4.3195 5.3994 10.7987 0.8769 Constraint 164 476 4.0903 5.1128 10.2257 0.8769 Constraint 164 469 4.5262 5.6577 11.3154 0.8769 Constraint 152 442 4.3602 5.4503 10.9006 0.8769 Constraint 152 417 3.5980 4.4975 8.9950 0.8769 Constraint 144 417 5.4455 6.8069 13.6138 0.8769 Constraint 58 533 5.1328 6.4161 12.8321 0.8758 Constraint 65 506 5.6186 7.0233 14.0465 0.8683 Constraint 86 516 5.9982 7.4977 14.9954 0.8671 Constraint 136 277 5.4578 6.8222 13.6445 0.8645 Constraint 131 323 5.3003 6.6253 13.2506 0.8633 Constraint 65 469 5.5160 6.8950 13.7900 0.8629 Constraint 177 290 5.7028 7.1285 14.2569 0.8623 Constraint 144 493 5.1486 6.4357 12.8715 0.8616 Constraint 3 533 5.6992 7.1240 14.2481 0.8608 Constraint 3 525 5.1631 6.4539 12.9078 0.8608 Constraint 39 296 5.6761 7.0951 14.1902 0.8593 Constraint 341 493 5.2357 6.5446 13.0892 0.8590 Constraint 136 393 5.3739 6.7173 13.4347 0.8534 Constraint 131 222 5.1146 6.3933 12.7865 0.8530 Constraint 189 506 5.4693 6.8366 13.6733 0.8514 Constraint 86 144 4.4298 5.5373 11.0746 0.8500 Constraint 341 544 5.6948 7.1185 14.2370 0.8473 Constraint 101 177 5.4153 6.7691 13.5382 0.8469 Constraint 47 189 4.5621 5.7026 11.4053 0.8464 Constraint 255 393 4.6909 5.8636 11.7272 0.8440 Constraint 315 409 5.2671 6.5839 13.1677 0.8436 Constraint 169 315 5.1706 6.4633 12.9266 0.8419 Constraint 73 352 5.5555 6.9444 13.8887 0.8411 Constraint 31 144 5.2023 6.5029 13.0057 0.8397 Constraint 86 558 6.2590 7.8238 15.6476 0.8365 Constraint 11 501 3.2970 4.1212 8.2425 0.8365 Constraint 330 533 5.0230 6.2787 12.5574 0.8344 Constraint 136 384 3.8572 4.8215 9.6430 0.8311 Constraint 177 341 5.5957 6.9947 13.9893 0.8295 Constraint 73 525 5.5769 6.9711 13.9421 0.8280 Constraint 269 431 5.9123 7.3904 14.7808 0.8279 Constraint 22 315 5.0540 6.3175 12.6350 0.8272 Constraint 189 417 4.9540 6.1925 12.3850 0.8271 Constraint 47 239 5.9723 7.4654 14.9307 0.8266 Constraint 222 296 5.2206 6.5257 13.0514 0.8259 Constraint 247 384 4.9885 6.2356 12.4713 0.8209 Constraint 39 315 4.8872 6.1090 12.2179 0.8201 Constraint 131 214 5.1893 6.4867 12.9733 0.8198 Constraint 308 525 5.1029 6.3786 12.7572 0.8179 Constraint 330 550 5.5969 6.9961 13.9923 0.8173 Constraint 330 426 5.2992 6.6240 13.2480 0.8157 Constraint 81 136 4.0983 5.1229 10.2459 0.8140 Constraint 47 131 5.1211 6.4013 12.8026 0.8111 Constraint 101 164 5.5634 6.9543 13.9086 0.8107 Constraint 207 431 5.0285 6.2856 12.5712 0.8062 Constraint 81 484 5.5188 6.8985 13.7971 0.8053 Constraint 164 315 5.0020 6.2525 12.5050 0.8050 Constraint 131 207 4.1066 5.1333 10.2666 0.8024 Constraint 86 501 5.8823 7.3529 14.7057 0.8022 Constraint 47 144 5.0086 6.2607 12.5215 0.8015 Constraint 341 461 5.9852 7.4815 14.9631 0.7985 Constraint 22 120 5.9387 7.4234 14.8468 0.7974 Constraint 136 374 4.8975 6.1219 12.2439 0.7919 Constraint 39 152 5.4715 6.8394 13.6789 0.7916 Constraint 31 296 4.4918 5.6147 11.2295 0.7891 Constraint 164 277 5.3052 6.6315 13.2629 0.7870 Constraint 22 442 4.2129 5.2662 10.5324 0.7789 Constraint 308 484 4.3811 5.4764 10.9527 0.7776 Constraint 101 230 5.9526 7.4408 14.8816 0.7755 Constraint 131 374 5.0268 6.2835 12.5671 0.7748 Constraint 47 476 4.8005 6.0007 12.0013 0.7723 Constraint 93 476 3.3672 4.2090 8.4180 0.7703 Constraint 93 352 3.9984 4.9979 9.9959 0.7696 Constraint 86 214 5.1459 6.4323 12.8646 0.7689 Constraint 296 525 6.0749 7.5936 15.1872 0.7660 Constraint 352 533 4.9454 6.1818 12.3635 0.7627 Constraint 109 453 4.7514 5.9393 11.8785 0.7603 Constraint 93 214 5.0216 6.2770 12.5541 0.7602 Constraint 169 367 6.3361 7.9201 15.8403 0.7595 Constraint 31 401 4.2701 5.3376 10.6753 0.7589 Constraint 101 426 4.0436 5.0544 10.1089 0.7545 Constraint 352 558 4.0849 5.1062 10.2124 0.7535 Constraint 39 177 4.3274 5.4093 10.8186 0.7521 Constraint 269 461 6.0726 7.5908 15.1816 0.7506 Constraint 152 330 5.4002 6.7503 13.5006 0.7502 Constraint 81 501 4.6944 5.8680 11.7360 0.7483 Constraint 214 308 5.7350 7.1687 14.3374 0.7469 Constraint 323 544 5.8094 7.2618 14.5236 0.7468 Constraint 296 533 5.9147 7.3933 14.7867 0.7447 Constraint 330 493 4.9570 6.1962 12.3925 0.7393 Constraint 144 476 4.0426 5.0532 10.1065 0.7388 Constraint 296 544 3.8197 4.7746 9.5491 0.7366 Constraint 81 247 4.7775 5.9719 11.9437 0.7344 Constraint 315 401 4.8740 6.0925 12.1850 0.7344 Constraint 247 393 5.5971 6.9964 13.9928 0.7341 Constraint 131 367 5.5421 6.9277 13.8553 0.7313 Constraint 86 525 5.2568 6.5710 13.1420 0.7308 Constraint 431 533 5.9690 7.4612 14.9224 0.7283 Constraint 136 341 4.8655 6.0819 12.1637 0.7276 Constraint 93 367 5.2153 6.5191 13.0383 0.7258 Constraint 11 442 6.1354 7.6693 15.3386 0.7249 Constraint 144 409 3.7486 4.6858 9.3716 0.7212 Constraint 81 461 4.7064 5.8830 11.7661 0.7195 Constraint 230 476 5.4497 6.8122 13.6244 0.7156 Constraint 323 417 4.5183 5.6479 11.2959 0.7150 Constraint 86 230 4.9258 6.1572 12.3144 0.7139 Constraint 31 558 4.3300 5.4125 10.8250 0.7132 Constraint 11 152 4.1911 5.2389 10.4778 0.7129 Constraint 261 461 6.2903 7.8629 15.7259 0.7125 Constraint 65 131 6.0110 7.5137 15.0274 0.7114 Constraint 144 393 4.3795 5.4744 10.9488 0.7094 Constraint 47 115 3.7488 4.6860 9.3719 0.7072 Constraint 115 169 4.3812 5.4765 10.9531 0.7069 Constraint 58 476 3.3094 4.1367 8.2735 0.7042 Constraint 47 152 5.5631 6.9539 13.9077 0.7025 Constraint 93 469 6.3082 7.8853 15.7706 0.7022 Constraint 230 431 4.7431 5.9289 11.8579 0.6985 Constraint 189 409 5.4918 6.8648 13.7295 0.6965 Constraint 81 214 4.6230 5.7787 11.5575 0.6939 Constraint 109 341 4.2823 5.3529 10.7059 0.6938 Constraint 315 525 4.7468 5.9335 11.8670 0.6937 Constraint 169 247 5.1690 6.4612 12.9224 0.6935 Constraint 93 431 4.3567 5.4459 10.8918 0.6928 Constraint 323 461 4.2575 5.3218 10.6436 0.6924 Constraint 115 177 5.2104 6.5130 13.0259 0.6917 Constraint 65 144 5.7664 7.2080 14.4160 0.6898 Constraint 359 533 5.1413 6.4266 12.8533 0.6870 Constraint 65 367 4.7745 5.9682 11.9363 0.6826 Constraint 290 493 6.0327 7.5409 15.0818 0.6821 Constraint 296 550 5.1849 6.4811 12.9622 0.6802 Constraint 65 374 5.4356 6.7945 13.5890 0.6795 Constraint 58 359 5.8597 7.3246 14.6493 0.6772 Constraint 86 189 4.7099 5.8874 11.7749 0.6746 Constraint 86 359 5.6352 7.0440 14.0881 0.6729 Constraint 73 453 3.7111 4.6389 9.2778 0.6729 Constraint 47 484 5.4648 6.8310 13.6620 0.6721 Constraint 239 476 5.7774 7.2217 14.4434 0.6715 Constraint 22 453 5.8790 7.3488 14.6975 0.6690 Constraint 22 144 5.0565 6.3207 12.6413 0.6688 Constraint 58 131 4.6114 5.7642 11.5285 0.6681 Constraint 269 374 5.0390 6.2987 12.5975 0.6675 Constraint 86 296 4.7749 5.9687 11.9373 0.6664 Constraint 136 315 5.1146 6.3932 12.7864 0.6650 Constraint 81 152 5.2472 6.5590 13.1181 0.6630 Constraint 164 330 5.4062 6.7578 13.5155 0.6598 Constraint 131 277 5.0047 6.2559 12.5118 0.6555 Constraint 81 207 5.8584 7.3230 14.6459 0.6552 Constraint 11 144 5.9226 7.4032 14.8064 0.6544 Constraint 431 516 5.2465 6.5582 13.1163 0.6523 Constraint 31 131 4.9075 6.1343 12.2686 0.6522 Constraint 22 207 5.2222 6.5277 13.0554 0.6497 Constraint 352 501 5.0939 6.3674 12.7348 0.6473 Constraint 58 461 4.4635 5.5794 11.1588 0.6467 Constraint 384 533 5.4371 6.7963 13.5927 0.6438 Constraint 47 374 5.0960 6.3699 12.7399 0.6390 Constraint 199 393 5.2840 6.6050 13.2100 0.6386 Constraint 315 493 5.9587 7.4483 14.8967 0.6375 Constraint 31 374 6.1152 7.6439 15.2879 0.6366 Constraint 73 189 5.4750 6.8438 13.6876 0.6315 Constraint 47 359 5.6078 7.0098 14.0195 0.6310 Constraint 22 417 3.6789 4.5987 9.1973 0.6307 Constraint 164 290 5.4498 6.8123 13.6246 0.6306 Constraint 109 330 5.6229 7.0287 14.0574 0.6266 Constraint 81 431 5.0622 6.3278 12.6556 0.6243 Constraint 152 476 4.9687 6.2109 12.4217 0.6234 Constraint 131 189 4.6280 5.7849 11.5699 0.6208 Constraint 81 525 5.3737 6.7171 13.4342 0.6201 Constraint 31 115 4.7837 5.9797 11.9593 0.6184 Constraint 65 409 5.5806 6.9757 13.9515 0.6183 Constraint 109 199 5.9338 7.4173 14.8346 0.6181 Constraint 11 476 5.8151 7.2688 14.5377 0.6146 Constraint 247 409 5.6556 7.0695 14.1391 0.6134 Constraint 330 501 4.6361 5.7951 11.5903 0.6080 Constraint 401 469 4.9683 6.2103 12.4207 0.6066 Constraint 230 469 5.7194 7.1493 14.2986 0.6043 Constraint 47 469 4.2179 5.2723 10.5447 0.6043 Constraint 3 442 6.3515 7.9393 15.8787 0.6043 Constraint 3 431 5.2825 6.6031 13.2061 0.6043 Constraint 73 207 5.7027 7.1284 14.2569 0.5985 Constraint 315 469 5.9042 7.3802 14.7604 0.5925 Constraint 308 469 4.8238 6.0297 12.0595 0.5925 Constraint 199 506 4.9948 6.2435 12.4869 0.5912 Constraint 144 330 5.7319 7.1648 14.3297 0.5907 Constraint 269 484 4.8402 6.0503 12.1005 0.5901 Constraint 101 493 5.5413 6.9266 13.8532 0.5897 Constraint 47 442 5.3723 6.7153 13.4307 0.5870 Constraint 47 199 5.5025 6.8781 13.7563 0.5854 Constraint 222 417 5.9833 7.4792 14.9584 0.5848 Constraint 290 359 5.3071 6.6339 13.2678 0.5847 Constraint 47 247 5.3101 6.6376 13.2753 0.5842 Constraint 65 164 5.7299 7.1624 14.3248 0.5838 Constraint 11 136 3.7547 4.6934 9.3868 0.5831 Constraint 31 230 5.5822 6.9778 13.9556 0.5828 Constraint 47 525 4.1483 5.1854 10.3708 0.5814 Constraint 426 516 6.3442 7.9302 15.8605 0.5796 Constraint 308 550 6.2281 7.7852 15.5703 0.5777 Constraint 58 144 5.0685 6.3357 12.6713 0.5751 Constraint 426 506 4.9904 6.2380 12.4760 0.5748 Constraint 152 409 6.0179 7.5224 15.0447 0.5748 Constraint 136 367 4.2771 5.3464 10.6927 0.5748 Constraint 93 189 5.7306 7.1633 14.3266 0.5726 Constraint 323 533 4.3277 5.4097 10.8194 0.5722 Constraint 86 367 4.1860 5.2325 10.4651 0.5710 Constraint 239 431 4.2287 5.2859 10.5717 0.5705 Constraint 189 516 5.8012 7.2515 14.5031 0.5680 Constraint 93 550 6.0692 7.5865 15.1731 0.5671 Constraint 222 393 5.8680 7.3349 14.6699 0.5664 Constraint 81 506 5.3149 6.6436 13.2872 0.5653 Constraint 115 323 4.5091 5.6364 11.2728 0.5646 Constraint 169 269 5.3013 6.6266 13.2533 0.5602 Constraint 144 525 5.2869 6.6087 13.2173 0.5551 Constraint 81 469 4.4095 5.5118 11.0237 0.5539 Constraint 81 308 4.5735 5.7169 11.4339 0.5527 Constraint 86 277 5.5315 6.9144 13.8288 0.5527 Constraint 169 290 4.9780 6.2225 12.4450 0.5523 Constraint 22 308 4.5423 5.6779 11.3557 0.5512 Constraint 73 296 3.5959 4.4949 8.9897 0.5505 Constraint 230 393 4.8727 6.0909 12.1818 0.5462 Constraint 120 476 4.0812 5.1015 10.2029 0.5459 Constraint 120 469 6.1030 7.6287 15.2575 0.5459 Constraint 115 476 5.4098 6.7622 13.5244 0.5459 Constraint 214 384 5.8450 7.3063 14.6126 0.5448 Constraint 131 269 5.3308 6.6635 13.3270 0.5436 Constraint 131 247 6.0185 7.5232 15.0463 0.5424 Constraint 164 417 4.3020 5.3776 10.7551 0.5407 Constraint 152 384 5.0596 6.3245 12.6490 0.5407 Constraint 431 501 4.9687 6.2108 12.4216 0.5378 Constraint 73 409 4.6671 5.8339 11.6678 0.5357 Constraint 86 164 5.2837 6.6046 13.2092 0.5352 Constraint 290 550 4.8178 6.0223 12.0445 0.5348 Constraint 290 484 4.7615 5.9519 11.9039 0.5342 Constraint 65 214 4.7349 5.9187 11.8373 0.5329 Constraint 93 461 5.2751 6.5939 13.1878 0.5303 Constraint 315 393 4.3022 5.3777 10.7555 0.5293 Constraint 144 341 5.3919 6.7398 13.4797 0.5265 Constraint 323 550 4.4941 5.6176 11.2351 0.5262 Constraint 120 230 4.9556 6.1945 12.3889 0.5255 Constraint 359 442 5.3721 6.7151 13.4302 0.5216 Constraint 115 330 4.8853 6.1067 12.2133 0.5173 Constraint 47 401 5.6182 7.0228 14.0456 0.5157 Constraint 164 269 4.9486 6.1857 12.3715 0.5155 Constraint 3 136 6.2164 7.7705 15.5410 0.5154 Constraint 73 516 5.9315 7.4143 14.8287 0.5154 Constraint 164 493 4.9706 6.2132 12.4264 0.5139 Constraint 58 136 5.1140 6.3925 12.7850 0.5116 Constraint 115 261 5.1106 6.3883 12.7766 0.5102 Constraint 469 533 5.2125 6.5157 13.0314 0.5081 Constraint 22 152 6.2196 7.7745 15.5489 0.5068 Constraint 81 144 5.5479 6.9349 13.8697 0.5031 Constraint 230 461 5.9006 7.3757 14.7515 0.5009 Constraint 222 484 5.4284 6.7855 13.5710 0.4942 Constraint 222 453 5.5365 6.9206 13.8413 0.4942 Constraint 426 493 6.1679 7.7098 15.4197 0.4934 Constraint 239 484 6.0887 7.6108 15.2217 0.4926 Constraint 39 255 5.3930 6.7412 13.4824 0.4911 Constraint 39 247 5.7296 7.1620 14.3239 0.4907 Constraint 315 484 4.9030 6.1288 12.2575 0.4894 Constraint 86 484 5.0553 6.3192 12.6383 0.4889 Constraint 109 207 5.4393 6.7991 13.5982 0.4877 Constraint 3 222 5.1371 6.4213 12.8427 0.4877 Constraint 247 493 5.3000 6.6250 13.2500 0.4863 Constraint 239 493 5.3387 6.6734 13.3467 0.4863 Constraint 330 409 5.5815 6.9769 13.9539 0.4844 Constraint 109 484 5.1906 6.4882 12.9764 0.4835 Constraint 11 308 5.1022 6.3777 12.7554 0.4830 Constraint 367 493 5.3183 6.6478 13.2957 0.4821 Constraint 401 525 5.6595 7.0743 14.1487 0.4806 Constraint 374 453 5.5189 6.8986 13.7973 0.4746 Constraint 22 131 6.0617 7.5771 15.1542 0.4737 Constraint 73 533 5.2844 6.6056 13.2111 0.4733 Constraint 296 409 4.8030 6.0037 12.0074 0.4728 Constraint 308 476 5.3413 6.6766 13.3533 0.4703 Constraint 86 493 4.4159 5.5199 11.0398 0.4677 Constraint 401 533 4.5064 5.6330 11.2661 0.4644 Constraint 269 506 5.6847 7.1059 14.2118 0.4635 Constraint 269 384 5.7048 7.1310 14.2620 0.4634 Constraint 393 533 5.5976 6.9970 13.9940 0.4593 Constraint 58 409 3.7879 4.7349 9.4699 0.4588 Constraint 189 393 5.7081 7.1352 14.2703 0.4585 Constraint 177 431 5.3850 6.7312 13.4625 0.4583 Constraint 81 367 4.7699 5.9624 11.9248 0.4558 Constraint 120 222 5.2237 6.5296 13.0592 0.4539 Constraint 3 315 4.6642 5.8303 11.6606 0.4527 Constraint 214 533 5.1523 6.4404 12.8808 0.4522 Constraint 11 120 5.2026 6.5032 13.0065 0.4519 Constraint 189 525 5.1250 6.4063 12.8125 0.4485 Constraint 81 493 5.3569 6.6961 13.3923 0.4483 Constraint 86 290 5.1187 6.3984 12.7968 0.4473 Constraint 323 501 4.5095 5.6369 11.2738 0.4443 Constraint 3 101 4.8745 6.0931 12.1862 0.4414 Constraint 31 164 4.5200 5.6500 11.3001 0.4408 Constraint 384 453 5.8176 7.2720 14.5439 0.4405 Constraint 290 461 4.8811 6.1014 12.2028 0.4405 Constraint 330 544 4.3403 5.4254 10.8507 0.4394 Constraint 152 290 5.1153 6.3941 12.7881 0.4393 Constraint 11 484 4.0993 5.1242 10.2484 0.4357 Constraint 81 426 6.1916 7.7396 15.4791 0.4356 Constraint 22 290 4.5279 5.6598 11.3197 0.4354 Constraint 330 431 5.1302 6.4127 12.8255 0.4345 Constraint 39 484 3.9247 4.9059 9.8117 0.4339 Constraint 207 506 5.7904 7.2380 14.4760 0.4321 Constraint 120 426 5.4531 6.8164 13.6329 0.4319 Constraint 73 359 4.7359 5.9198 11.8397 0.4306 Constraint 131 199 5.3062 6.6327 13.2655 0.4290 Constraint 261 393 5.3209 6.6511 13.3022 0.4276 Constraint 131 431 5.2503 6.5629 13.1258 0.4263 Constraint 296 476 6.1030 7.6288 15.2576 0.4262 Constraint 136 359 5.8991 7.3739 14.7477 0.4258 Constraint 144 374 5.1816 6.4769 12.9539 0.4257 Constraint 255 550 3.9663 4.9579 9.9158 0.4244 Constraint 65 207 5.8443 7.3053 14.6106 0.4216 Constraint 359 431 4.6669 5.8336 11.6673 0.4213 Constraint 109 214 5.9441 7.4301 14.8603 0.4191 Constraint 93 290 5.6962 7.1202 14.2405 0.4183 Constraint 65 189 6.3759 7.9699 15.9398 0.4183 Constraint 453 525 5.8655 7.3318 14.6637 0.4182 Constraint 261 453 4.5099 5.6373 11.2747 0.4179 Constraint 177 417 3.7394 4.6742 9.3484 0.4176 Constraint 152 544 5.4107 6.7634 13.5267 0.4169 Constraint 58 426 5.5086 6.8857 13.7715 0.4151 Constraint 3 255 5.9731 7.4663 14.9327 0.4128 Constraint 58 417 6.1065 7.6331 15.2661 0.4112 Constraint 73 199 6.0943 7.6178 15.2356 0.4099 Constraint 239 461 5.4616 6.8270 13.6540 0.4090 Constraint 426 544 4.9714 6.2143 12.4286 0.4089 Constraint 367 461 4.6940 5.8675 11.7350 0.4074 Constraint 73 550 5.2591 6.5738 13.1477 0.4045 Constraint 230 417 5.7117 7.1396 14.2791 0.4043 Constraint 136 431 4.5570 5.6963 11.3926 0.4043 Constraint 120 359 5.5472 6.9340 13.8680 0.4039 Constraint 152 453 4.8382 6.0478 12.0956 0.4033 Constraint 323 476 5.0345 6.2931 12.5862 0.4025 Constraint 323 558 5.9129 7.3911 14.7822 0.4001 Constraint 73 469 6.2905 7.8632 15.7263 0.3979 Constraint 169 431 5.6696 7.0870 14.1740 0.3976 Constraint 131 330 4.7869 5.9836 11.9673 0.3971 Constraint 58 177 5.4980 6.8725 13.7449 0.3970 Constraint 81 516 4.3497 5.4372 10.8743 0.3941 Constraint 131 230 3.7083 4.6354 9.2708 0.3926 Constraint 290 476 3.2258 4.0322 8.0645 0.3926 Constraint 152 533 4.9085 6.1357 12.2714 0.3916 Constraint 86 222 5.2432 6.5540 13.1079 0.3911 Constraint 214 544 5.2444 6.5555 13.1111 0.3893 Constraint 169 453 5.1868 6.4835 12.9670 0.3890 Constraint 73 214 5.1268 6.4086 12.8171 0.3881 Constraint 453 550 5.5674 6.9593 13.9185 0.3868 Constraint 177 393 4.3210 5.4012 10.8024 0.3852 Constraint 131 239 5.3358 6.6697 13.3394 0.3841 Constraint 81 164 5.2569 6.5711 13.1423 0.3841 Constraint 73 401 4.5669 5.7087 11.4174 0.3840 Constraint 199 409 5.3650 6.7063 13.4125 0.3839 Constraint 341 558 6.2439 7.8049 15.6099 0.3822 Constraint 58 352 4.9407 6.1759 12.3518 0.3820 Constraint 136 525 5.5937 6.9921 13.9841 0.3796 Constraint 81 384 4.3932 5.4915 10.9830 0.3790 Constraint 58 367 5.4981 6.8726 13.7452 0.3790 Constraint 93 417 6.1970 7.7462 15.4924 0.3782 Constraint 374 544 5.7248 7.1560 14.3119 0.3777 Constraint 308 461 5.3023 6.6278 13.2557 0.3765 Constraint 22 484 4.3329 5.4161 10.8322 0.3760 Constraint 39 131 5.1048 6.3810 12.7619 0.3755 Constraint 359 493 4.4808 5.6010 11.2019 0.3747 Constraint 296 442 6.3692 7.9615 15.9230 0.3742 Constraint 247 431 5.5351 6.9189 13.8379 0.3739 Constraint 86 506 4.1625 5.2031 10.4062 0.3735 Constraint 93 525 5.1777 6.4721 12.9443 0.3709 Constraint 73 506 4.4521 5.5652 11.1304 0.3706 Constraint 22 323 5.2833 6.6041 13.2082 0.3693 Constraint 330 442 5.6171 7.0213 14.0427 0.3681 Constraint 11 255 5.8616 7.3270 14.6541 0.3668 Constraint 152 426 5.7683 7.2103 14.4207 0.3654 Constraint 115 352 5.4479 6.8098 13.6197 0.3645 Constraint 199 516 4.5193 5.6492 11.2983 0.3643 Constraint 352 484 4.9573 6.1967 12.3934 0.3639 Constraint 131 461 4.5805 5.7257 11.4513 0.3628 Constraint 164 533 4.0876 5.1095 10.2190 0.3625 Constraint 308 393 5.0960 6.3700 12.7401 0.3609 Constraint 152 525 4.0713 5.0892 10.1783 0.3609 Constraint 109 222 4.3478 5.4347 10.8694 0.3608 Constraint 214 431 6.0816 7.6020 15.2040 0.3602 Constraint 115 359 5.9494 7.4368 14.8736 0.3595 Constraint 93 453 5.9508 7.4385 14.8769 0.3589 Constraint 11 177 4.9435 6.1794 12.3587 0.3589 Constraint 3 247 5.2217 6.5271 13.0543 0.3579 Constraint 207 409 4.4713 5.5891 11.1782 0.3575 Constraint 374 442 5.3813 6.7266 13.4533 0.3549 Constraint 230 516 6.2369 7.7962 15.5923 0.3530 Constraint 330 525 5.6182 7.0228 14.0456 0.3508 Constraint 315 516 6.0537 7.5672 15.1344 0.3508 Constraint 39 476 5.5325 6.9156 13.8312 0.3494 Constraint 11 131 6.1801 7.7251 15.4502 0.3485 Constraint 3 426 4.5921 5.7401 11.4802 0.3484 Constraint 22 261 5.2460 6.5575 13.1149 0.3459 Constraint 152 516 5.3796 6.7245 13.4490 0.3450 Constraint 469 550 4.7042 5.8802 11.7605 0.3446 Constraint 47 164 4.4153 5.5191 11.0383 0.3441 Constraint 73 222 5.8170 7.2713 14.5425 0.3420 Constraint 207 469 5.4629 6.8287 13.6573 0.3416 Constraint 189 469 5.3721 6.7151 13.4301 0.3416 Constraint 214 417 5.1087 6.3859 12.7719 0.3388 Constraint 131 315 5.5073 6.8841 13.7682 0.3379 Constraint 22 239 4.7477 5.9346 11.8692 0.3377 Constraint 120 442 6.0332 7.5415 15.0830 0.3374 Constraint 214 393 4.9203 6.1504 12.3007 0.3373 Constraint 115 341 5.7149 7.1436 14.2872 0.3371 Constraint 131 476 4.2884 5.3605 10.7211 0.3370 Constraint 401 550 4.7631 5.9539 11.9077 0.3358 Constraint 341 417 5.5062 6.8828 13.7655 0.3354 Constraint 341 476 5.6510 7.0638 14.1276 0.3353 Constraint 131 453 4.9441 6.1801 12.3602 0.3344 Constraint 177 442 6.0097 7.5121 15.0243 0.3340 Constraint 169 442 4.8518 6.0647 12.1295 0.3340 Constraint 164 442 5.2349 6.5436 13.0872 0.3340 Constraint 120 384 5.0517 6.3146 12.6293 0.3340 Constraint 93 409 4.8892 6.1115 12.2229 0.3340 Constraint 65 461 5.6453 7.0567 14.1133 0.3340 Constraint 109 516 4.6046 5.7557 11.5114 0.3325 Constraint 39 401 3.3661 4.2076 8.4151 0.3314 Constraint 109 269 4.4434 5.5542 11.1084 0.3307 Constraint 247 506 4.7612 5.9515 11.9031 0.3306 Constraint 359 558 5.7935 7.2419 14.4837 0.3302 Constraint 109 493 4.8348 6.0435 12.0869 0.3299 Constraint 290 516 5.2596 6.5745 13.1489 0.3277 Constraint 93 296 5.5013 6.8767 13.7533 0.3273 Constraint 484 558 4.1824 5.2280 10.4559 0.3268 Constraint 115 544 5.0453 6.3066 12.6132 0.3252 Constraint 109 544 4.4330 5.5413 11.0826 0.3252 Constraint 58 484 5.9203 7.4004 14.8009 0.3252 Constraint 65 401 4.4482 5.5603 11.1206 0.3224 Constraint 73 315 6.0847 7.6058 15.2117 0.3184 Constraint 81 409 5.3889 6.7361 13.4723 0.3176 Constraint 144 533 4.3669 5.4586 10.9172 0.3173 Constraint 11 93 6.1872 7.7341 15.4681 0.3141 Constraint 86 308 4.3393 5.4241 10.8482 0.3131 Constraint 164 484 4.6416 5.8020 11.6041 0.3119 Constraint 22 255 4.1767 5.2209 10.4417 0.3119 Constraint 22 247 5.1033 6.3791 12.7582 0.3119 Constraint 65 384 3.8135 4.7668 9.5337 0.3096 Constraint 31 484 3.1369 3.9212 7.8423 0.3093 Constraint 31 476 5.7370 7.1713 14.3425 0.3093 Constraint 296 506 5.0597 6.3246 12.6492 0.3076 Constraint 269 393 5.0350 6.2937 12.5875 0.3070 Constraint 247 544 4.3343 5.4179 10.8358 0.3067 Constraint 239 544 3.5911 4.4888 8.9777 0.3067 Constraint 22 269 4.6409 5.8012 11.6023 0.3033 Constraint 131 442 5.1218 6.4023 12.8046 0.3021 Constraint 290 558 5.4413 6.8016 13.6033 0.3020 Constraint 177 525 3.3379 4.1724 8.3449 0.3013 Constraint 177 409 4.7474 5.9342 11.8685 0.3009 Constraint 341 431 6.2630 7.8288 15.6575 0.3009 Constraint 214 506 5.3487 6.6858 13.3716 0.3008 Constraint 169 239 3.8207 4.7758 9.5517 0.2996 Constraint 152 315 4.3919 5.4899 10.9797 0.2996 Constraint 136 255 5.2090 6.5112 13.0224 0.2989 Constraint 115 516 4.5333 5.6667 11.3333 0.2985 Constraint 164 558 5.4921 6.8652 13.7303 0.2962 Constraint 393 550 4.3610 5.4512 10.9024 0.2936 Constraint 11 239 4.6548 5.8185 11.6370 0.2935 Constraint 11 230 5.8727 7.3409 14.6818 0.2935 Constraint 222 544 5.2867 6.6084 13.2168 0.2935 Constraint 73 144 4.8439 6.0549 12.1099 0.2927 Constraint 22 393 5.8120 7.2650 14.5299 0.2893 Constraint 131 558 5.9232 7.4040 14.8080 0.2869 Constraint 11 164 5.4303 6.7878 13.5756 0.2869 Constraint 131 255 4.7865 5.9831 11.9663 0.2867 Constraint 73 393 5.9054 7.3818 14.7636 0.2837 Constraint 222 308 5.0035 6.2543 12.5087 0.2813 Constraint 81 239 5.2750 6.5938 13.1876 0.2798 Constraint 101 442 5.0432 6.3040 12.6080 0.2771 Constraint 199 525 5.9408 7.4260 14.8520 0.2766 Constraint 453 544 5.0929 6.3661 12.7322 0.2762 Constraint 11 207 5.2844 6.6055 13.2110 0.2758 Constraint 109 352 5.5818 6.9773 13.9546 0.2756 Constraint 207 558 5.9616 7.4520 14.9040 0.2753 Constraint 199 558 4.9408 6.1760 12.3520 0.2753 Constraint 86 461 5.0724 6.3405 12.6810 0.2753 Constraint 81 533 4.6670 5.8338 11.6675 0.2753 Constraint 73 431 5.3167 6.6459 13.2918 0.2753 Constraint 86 544 4.6763 5.8454 11.6908 0.2751 Constraint 409 501 5.1624 6.4530 12.9061 0.2747 Constraint 222 533 4.8561 6.0701 12.1403 0.2728 Constraint 86 476 6.1196 7.6495 15.2990 0.2726 Constraint 81 393 5.5647 6.9559 13.9118 0.2710 Constraint 177 501 5.8100 7.2625 14.5250 0.2705 Constraint 367 453 4.7738 5.9672 11.9345 0.2700 Constraint 255 533 3.8297 4.7871 9.5742 0.2695 Constraint 73 442 5.5466 6.9333 13.8665 0.2688 Constraint 31 239 3.3021 4.1276 8.2553 0.2677 Constraint 120 341 5.4016 6.7520 13.5040 0.2677 Constraint 308 431 4.5023 5.6279 11.2558 0.2672 Constraint 189 431 5.1470 6.4338 12.8676 0.2672 Constraint 177 506 6.1985 7.7482 15.4964 0.2672 Constraint 359 469 5.2783 6.5979 13.1958 0.2648 Constraint 93 516 6.1222 7.6528 15.3056 0.2638 Constraint 86 533 5.0125 6.2656 12.5313 0.2638 Constraint 65 393 5.9984 7.4980 14.9959 0.2637 Constraint 152 484 5.7155 7.1444 14.2889 0.2634 Constraint 308 384 4.3083 5.3854 10.7707 0.2621 Constraint 330 417 5.5597 6.9497 13.8993 0.2614 Constraint 136 239 5.1124 6.3905 12.7809 0.2604 Constraint 269 476 6.1889 7.7361 15.4721 0.2599 Constraint 101 169 6.2798 7.8498 15.6996 0.2599 Constraint 65 426 4.8706 6.0883 12.1766 0.2589 Constraint 47 384 5.7927 7.2409 14.4817 0.2588 Constraint 290 501 5.7977 7.2471 14.4941 0.2587 Constraint 277 501 6.0933 7.6167 15.2333 0.2587 Constraint 269 501 4.3108 5.3885 10.7771 0.2587 Constraint 255 544 6.0064 7.5080 15.0160 0.2587 Constraint 81 476 4.9954 6.2443 12.4886 0.2587 Constraint 323 469 3.6023 4.5028 9.0056 0.2580 Constraint 255 506 5.3929 6.7411 13.4823 0.2564 Constraint 426 558 5.2936 6.6170 13.2340 0.2558 Constraint 374 469 4.5363 5.6703 11.3407 0.2550 Constraint 144 222 5.9785 7.4731 14.9462 0.2548 Constraint 131 469 4.6743 5.8429 11.6858 0.2545 Constraint 152 558 4.8667 6.0833 12.1667 0.2528 Constraint 11 214 3.6410 4.5513 9.1025 0.2526 Constraint 39 164 4.6940 5.8675 11.7351 0.2524 Constraint 277 374 4.4271 5.5338 11.0677 0.2500 Constraint 22 164 4.7602 5.9503 11.9005 0.2493 Constraint 31 417 5.3058 6.6322 13.2644 0.2488 Constraint 315 453 4.8887 6.1108 12.2216 0.2464 Constraint 484 550 3.8619 4.8274 9.6549 0.2435 Constraint 93 152 4.0778 5.0972 10.1944 0.2435 Constraint 86 152 5.8424 7.3030 14.6061 0.2435 Constraint 152 230 4.8661 6.0826 12.1651 0.2434 Constraint 115 501 3.9736 4.9670 9.9341 0.2430 Constraint 101 516 4.1375 5.1719 10.3438 0.2430 Constraint 101 506 4.7611 5.9513 11.9027 0.2430 Constraint 277 506 6.0222 7.5278 15.0556 0.2412 Constraint 3 109 4.9223 6.1529 12.3058 0.2411 Constraint 461 544 5.7599 7.1999 14.3997 0.2409 Constraint 239 506 6.3058 7.8822 15.7644 0.2404 Constraint 476 558 5.1867 6.4834 12.9667 0.2386 Constraint 308 558 5.7594 7.1993 14.3986 0.2386 Constraint 308 544 4.0870 5.1088 10.2176 0.2386 Constraint 269 544 5.7147 7.1434 14.2868 0.2386 Constraint 136 442 5.4280 6.7850 13.5699 0.2386 Constraint 65 296 3.6005 4.5007 9.0013 0.2386 Constraint 11 247 3.5576 4.4469 8.8939 0.2386 Constraint 3 417 4.1124 5.1405 10.2809 0.2386 Constraint 22 136 6.1309 7.6637 15.3273 0.2361 Constraint 93 230 5.5085 6.8856 13.7712 0.2359 Constraint 214 525 4.3454 5.4317 10.8634 0.2358 Constraint 214 516 4.8019 6.0024 12.0048 0.2335 Constraint 207 516 4.5641 5.7052 11.4103 0.2335 Constraint 261 525 4.8658 6.0823 12.1646 0.2322 Constraint 384 550 3.4811 4.3514 8.7028 0.2315 Constraint 131 501 4.2536 5.3170 10.6340 0.2305 Constraint 169 341 5.5540 6.9425 13.8851 0.2304 Constraint 199 544 4.4510 5.5637 11.1275 0.2282 Constraint 207 533 5.3013 6.6267 13.2534 0.2276 Constraint 93 401 6.2339 7.7924 15.5848 0.2266 Constraint 409 493 5.1192 6.3990 12.7980 0.2244 Constraint 401 501 4.9683 6.2104 12.4207 0.2244 Constraint 136 222 4.2655 5.3319 10.6638 0.2231 Constraint 177 255 3.7254 4.6568 9.3136 0.2223 Constraint 207 374 6.1247 7.6559 15.3118 0.2210 Constraint 3 558 3.9205 4.9007 9.8013 0.2206 Constraint 109 431 5.9229 7.4036 14.8072 0.2199 Constraint 93 442 6.3165 7.8957 15.7913 0.2199 Constraint 177 544 5.7950 7.2438 14.4876 0.2197 Constraint 323 409 4.9907 6.2384 12.4767 0.2193 Constraint 22 558 3.4504 4.3130 8.6260 0.2176 Constraint 401 544 5.5923 6.9904 13.9808 0.2162 Constraint 277 367 6.1901 7.7376 15.4753 0.2159 Constraint 39 384 5.9953 7.4941 14.9881 0.2150 Constraint 352 453 5.5926 6.9908 13.9816 0.2121 Constraint 222 384 5.1531 6.4413 12.8827 0.2120 Constraint 152 239 3.7403 4.6754 9.3508 0.2117 Constraint 39 222 5.2630 6.5788 13.1576 0.2107 Constraint 296 516 3.9682 4.9602 9.9204 0.2094 Constraint 115 506 5.2332 6.5415 13.0831 0.2083 Constraint 109 506 4.5279 5.6599 11.3197 0.2083 Constraint 101 525 5.1919 6.4899 12.9799 0.2083 Constraint 31 384 5.9980 7.4975 14.9949 0.2060 Constraint 39 239 5.5040 6.8800 13.7600 0.2047 Constraint 120 374 4.3648 5.4559 10.9119 0.2044 Constraint 3 152 5.3914 6.7393 13.4786 0.2044 Constraint 255 484 4.9561 6.1951 12.3902 0.2038 Constraint 65 315 4.8739 6.0923 12.1846 0.2038 Constraint 47 367 4.6514 5.8142 11.6284 0.2028 Constraint 247 550 4.2753 5.3442 10.6883 0.2021 Constraint 214 550 4.6094 5.7617 11.5235 0.2021 Constraint 255 493 5.3737 6.7171 13.4342 0.2015 Constraint 277 550 5.7043 7.1303 14.2607 0.2012 Constraint 359 484 5.6152 7.0190 14.0380 0.2009 Constraint 73 374 4.1503 5.1879 10.3758 0.2008 Constraint 367 469 4.7652 5.9564 11.9129 0.2001 Constraint 359 476 3.6528 4.5660 9.1320 0.2001 Constraint 11 461 3.8627 4.8283 9.6567 0.1996 Constraint 169 550 5.5945 6.9931 13.9863 0.1994 Constraint 169 261 3.1680 3.9600 7.9201 0.1984 Constraint 169 255 5.0249 6.2811 12.5623 0.1984 Constraint 239 453 5.5684 6.9605 13.9211 0.1966 Constraint 207 550 5.9490 7.4362 14.8725 0.1943 Constraint 31 550 5.8000 7.2501 14.5001 0.1943 Constraint 401 558 4.7958 5.9948 11.9895 0.1936 Constraint 199 533 4.3152 5.3941 10.7881 0.1928 Constraint 22 222 5.4520 6.8150 13.6301 0.1912 Constraint 164 341 5.0918 6.3648 12.7296 0.1910 Constraint 247 461 5.5668 6.9585 13.9171 0.1907 Constraint 3 214 5.1973 6.4966 12.9932 0.1905 Constraint 393 501 6.2471 7.8089 15.6178 0.1887 Constraint 115 461 5.0260 6.2825 12.5650 0.1877 Constraint 330 558 4.8041 6.0051 12.0102 0.1873 Constraint 199 384 5.5072 6.8840 13.7680 0.1866 Constraint 144 469 5.9206 7.4007 14.8015 0.1861 Constraint 207 525 5.3745 6.7182 13.4364 0.1825 Constraint 239 550 4.1977 5.2472 10.4944 0.1814 Constraint 426 533 5.8951 7.3689 14.7378 0.1804 Constraint 401 516 5.8929 7.3662 14.7324 0.1802 Constraint 393 516 5.0079 6.2598 12.5197 0.1802 Constraint 330 476 5.6640 7.0800 14.1599 0.1802 Constraint 131 401 5.0888 6.3610 12.7219 0.1792 Constraint 269 550 5.9658 7.4573 14.9145 0.1789 Constraint 239 525 6.3986 7.9982 15.9964 0.1789 Constraint 47 393 5.1478 6.4348 12.8695 0.1787 Constraint 58 152 5.5519 6.9398 13.8796 0.1767 Constraint 476 550 3.6282 4.5353 9.0706 0.1754 Constraint 315 550 5.4005 6.7506 13.5012 0.1754 Constraint 315 544 3.7941 4.7426 9.4853 0.1754 Constraint 290 506 5.3610 6.7012 13.4024 0.1754 Constraint 164 239 4.6969 5.8712 11.7424 0.1754 Constraint 152 269 5.3439 6.6799 13.3598 0.1754 Constraint 152 501 4.4681 5.5851 11.1702 0.1736 Constraint 31 393 4.7697 5.9622 11.9243 0.1729 Constraint 58 442 4.4859 5.6074 11.2148 0.1720 Constraint 426 501 4.4449 5.5561 11.1123 0.1710 Constraint 207 393 5.8096 7.2621 14.5241 0.1683 Constraint 374 550 4.1179 5.1474 10.2948 0.1677 Constraint 177 558 5.2060 6.5075 13.0151 0.1677 Constraint 177 550 5.3329 6.6661 13.3322 0.1677 Constraint 169 558 3.5446 4.4307 8.8614 0.1677 Constraint 164 550 4.3139 5.3924 10.7848 0.1677 Constraint 330 461 5.4757 6.8446 13.6893 0.1677 Constraint 136 533 5.5311 6.9138 13.8276 0.1676 Constraint 3 290 5.2914 6.6142 13.2285 0.1672 Constraint 442 525 5.7167 7.1459 14.2918 0.1671 Constraint 269 426 4.7456 5.9320 11.8641 0.1649 Constraint 261 544 5.9507 7.4384 14.8768 0.1647 Constraint 115 431 5.9177 7.3971 14.7942 0.1640 Constraint 73 152 5.3911 6.7389 13.4778 0.1634 Constraint 352 431 4.8830 6.1037 12.2074 0.1630 Constraint 93 558 3.7461 4.6827 9.3654 0.1626 Constraint 11 417 4.9132 6.1415 12.2830 0.1612 Constraint 131 525 6.1240 7.6550 15.3100 0.1611 Constraint 136 230 5.3785 6.7231 13.4462 0.1608 Constraint 120 516 5.3159 6.6449 13.2897 0.1597 Constraint 3 207 5.1976 6.4970 12.9940 0.1588 Constraint 22 277 5.2198 6.5248 13.0495 0.1586 Constraint 417 525 5.6564 7.0705 14.1411 0.1584 Constraint 431 544 5.3322 6.6652 13.3305 0.1575 Constraint 426 550 3.9006 4.8758 9.7516 0.1575 Constraint 131 341 4.8289 6.0361 12.0723 0.1566 Constraint 109 409 3.8635 4.8293 9.6586 0.1566 Constraint 109 401 3.9033 4.8792 9.7584 0.1566 Constraint 109 374 5.6650 7.0813 14.1625 0.1566 Constraint 101 401 4.3405 5.4257 10.8514 0.1566 Constraint 352 476 5.2218 6.5272 13.0545 0.1559 Constraint 352 469 5.7528 7.1910 14.3821 0.1559 Constraint 115 367 5.8619 7.3274 14.6548 0.1559 Constraint 120 367 4.4283 5.5354 11.0708 0.1546 Constraint 189 384 4.0540 5.0675 10.1350 0.1463 Constraint 199 431 4.2706 5.3382 10.6765 0.1423 Constraint 115 374 5.2955 6.6194 13.2388 0.1423 Constraint 409 550 4.7156 5.8946 11.7891 0.1422 Constraint 144 550 5.7508 7.1885 14.3769 0.1422 Constraint 109 501 5.1189 6.3987 12.7973 0.1389 Constraint 101 533 6.0279 7.5349 15.0698 0.1389 Constraint 86 374 5.9602 7.4502 14.9004 0.1367 Constraint 11 323 4.7337 5.9171 11.8341 0.1359 Constraint 230 544 5.9488 7.4359 14.8719 0.1359 Constraint 401 506 6.2106 7.7633 15.5266 0.1353 Constraint 131 384 5.4971 6.8714 13.7428 0.1353 Constraint 3 93 4.8481 6.0601 12.1203 0.1353 Constraint 255 426 5.5262 6.9077 13.8154 0.1350 Constraint 39 469 5.8563 7.3203 14.6407 0.1348 Constraint 31 469 6.2993 7.8741 15.7482 0.1348 Constraint 22 476 5.9563 7.4453 14.8907 0.1348 Constraint 22 469 3.7222 4.6527 9.3055 0.1348 Constraint 11 469 5.2920 6.6150 13.2301 0.1348 Constraint 3 476 6.3109 7.8886 15.7772 0.1348 Constraint 189 533 5.8988 7.3735 14.7469 0.1336 Constraint 177 533 3.7003 4.6253 9.2507 0.1336 Constraint 255 461 5.5107 6.8884 13.7767 0.1335 Constraint 384 516 5.0922 6.3652 12.7305 0.1332 Constraint 269 453 5.1171 6.3963 12.7926 0.1332 Constraint 65 152 4.5022 5.6278 11.2556 0.1326 Constraint 230 442 4.9654 6.2067 12.4134 0.1316 Constraint 86 401 6.2096 7.7620 15.5240 0.1316 Constraint 269 442 5.6904 7.1130 14.2260 0.1315 Constraint 81 417 5.6973 7.1216 14.2431 0.1302 Constraint 65 442 4.3500 5.4375 10.8750 0.1302 Constraint 453 533 5.3574 6.6967 13.3934 0.1293 Constraint 442 544 5.0270 6.2838 12.5676 0.1293 Constraint 86 431 5.7182 7.1478 14.2956 0.1278 Constraint 86 409 5.4167 6.7709 13.5418 0.1278 Constraint 177 469 6.2485 7.8107 15.6213 0.1265 Constraint 164 384 5.6106 7.0132 14.0265 0.1254 Constraint 290 544 5.4911 6.8638 13.7276 0.1242 Constraint 277 533 4.7636 5.9545 11.9091 0.1242 Constraint 169 352 6.2550 7.8187 15.6375 0.1242 Constraint 152 352 6.2125 7.7656 15.5313 0.1242 Constraint 152 341 4.5802 5.7253 11.4506 0.1242 Constraint 152 323 4.0176 5.0220 10.0439 0.1242 Constraint 120 401 5.3431 6.6789 13.3578 0.1242 Constraint 115 401 5.6113 7.0141 14.0282 0.1242 Constraint 109 469 5.9381 7.4226 14.8453 0.1242 Constraint 109 426 3.9155 4.8944 9.7888 0.1242 Constraint 22 296 5.8409 7.3012 14.6023 0.1241 Constraint 58 453 5.9136 7.3920 14.7841 0.1240 Constraint 136 269 4.5138 5.6423 11.2845 0.1235 Constraint 81 401 6.0488 7.5610 15.1220 0.1231 Constraint 136 501 4.3317 5.4146 10.8292 0.1220 Constraint 290 442 4.8591 6.0738 12.1477 0.1206 Constraint 290 525 5.4500 6.8125 13.6251 0.1206 Constraint 3 81 6.3249 7.9061 15.8121 0.1206 Constraint 374 558 4.4308 5.5385 11.0770 0.1197 Constraint 384 461 5.1992 6.4990 12.9980 0.1185 Constraint 115 426 6.2594 7.8242 15.6484 0.1171 Constraint 290 417 5.4616 6.8270 13.6541 0.1167 Constraint 11 277 6.1229 7.6537 15.3074 0.1165 Constraint 39 230 6.2039 7.7549 15.5098 0.1146 Constraint 442 550 6.1581 7.6977 15.3954 0.1124 Constraint 296 501 5.5115 6.8893 13.7786 0.1123 Constraint 296 431 5.2532 6.5666 13.1331 0.1116 Constraint 222 550 4.2497 5.3122 10.6243 0.1109 Constraint 222 525 6.0642 7.5802 15.1604 0.1109 Constraint 115 393 4.8864 6.1080 12.2161 0.1099 Constraint 11 290 4.2842 5.3553 10.7105 0.1099 Constraint 374 476 4.0574 5.0718 10.1436 0.1089 Constraint 239 442 6.1644 7.7055 15.4111 0.1076 Constraint 31 247 6.0737 7.5921 15.1842 0.1069 Constraint 393 558 4.3852 5.4814 10.9629 0.1062 Constraint 393 544 4.2708 5.3385 10.6770 0.1062 Constraint 384 558 5.1728 6.4660 12.9319 0.1062 Constraint 367 476 5.5088 6.8860 13.7719 0.1062 Constraint 11 330 3.7695 4.7119 9.4238 0.1051 Constraint 3 341 5.5195 6.8994 13.7987 0.1051 Constraint 3 330 4.3262 5.4077 10.8155 0.1051 Constraint 86 426 6.1148 7.6435 15.2871 0.1040 Constraint 81 169 4.9431 6.1789 12.3578 0.1040 Constraint 3 86 4.9408 6.1760 12.3520 0.1040 Constraint 330 453 4.2818 5.3523 10.7046 0.1030 Constraint 417 506 5.1882 6.4853 12.9706 0.1022 Constraint 417 493 3.7361 4.6701 9.3401 0.1022 Constraint 81 374 4.7054 5.8818 11.7635 0.1022 Constraint 431 558 6.1548 7.6935 15.3871 0.1009 Constraint 341 442 3.9530 4.9413 9.8825 0.1009 Constraint 323 442 6.0806 7.6007 15.2015 0.1009 Constraint 214 484 4.4559 5.5699 11.1398 0.0999 Constraint 101 367 4.8915 6.1144 12.2289 0.0996 Constraint 131 359 4.6442 5.8052 11.6104 0.0992 Constraint 409 558 5.2727 6.5908 13.1817 0.0991 Constraint 384 469 4.5130 5.6412 11.2824 0.0991 Constraint 359 544 5.5032 6.8790 13.7581 0.0991 Constraint 290 469 5.4863 6.8579 13.7158 0.0990 Constraint 86 239 5.3773 6.7216 13.4432 0.0919 Constraint 315 558 4.5276 5.6595 11.3191 0.0918 Constraint 47 417 6.2234 7.7792 15.5584 0.0918 Constraint 11 296 5.9959 7.4948 14.9897 0.0918 Constraint 417 550 6.3864 7.9830 15.9660 0.0902 Constraint 393 461 3.5093 4.3866 8.7733 0.0902 Constraint 169 501 4.4209 5.5261 11.0523 0.0902 Constraint 136 516 6.0812 7.6015 15.2029 0.0902 Constraint 115 558 4.2919 5.3649 10.7298 0.0902 Constraint 115 533 5.6928 7.1160 14.2320 0.0902 Constraint 115 525 6.1915 7.7393 15.4787 0.0902 Constraint 315 417 5.6542 7.0677 14.1355 0.0899 Constraint 73 417 5.3659 6.7073 13.4147 0.0899 Constraint 58 431 4.4166 5.5207 11.0415 0.0899 Constraint 47 431 6.0965 7.6206 15.2411 0.0899 Constraint 39 442 5.9078 7.3848 14.7695 0.0899 Constraint 169 409 5.3510 6.6887 13.3775 0.0875 Constraint 47 169 6.0868 7.6085 15.2170 0.0875 Constraint 39 169 3.3855 4.2319 8.4639 0.0875 Constraint 39 374 5.3031 6.6289 13.2578 0.0873 Constraint 269 516 4.4349 5.5437 11.0873 0.0867 Constraint 152 255 6.0654 7.5818 15.1635 0.0860 Constraint 290 431 4.1058 5.1323 10.2645 0.0844 Constraint 169 544 4.6606 5.8257 11.6515 0.0837 Constraint 136 544 4.6258 5.7823 11.5646 0.0759 Constraint 120 506 5.9669 7.4587 14.9173 0.0694 Constraint 109 533 6.0953 7.6192 15.2383 0.0694 Constraint 109 525 5.4549 6.8186 13.6373 0.0694 Constraint 101 431 5.7698 7.2123 14.4246 0.0694 Constraint 93 544 5.2749 6.5937 13.1874 0.0694 Constraint 93 533 4.9371 6.1713 12.3426 0.0694 Constraint 417 533 5.3262 6.6578 13.3156 0.0681 Constraint 417 501 4.4339 5.5424 11.0849 0.0681 Constraint 393 506 4.3121 5.3902 10.7803 0.0681 Constraint 65 453 6.2612 7.8266 15.6531 0.0681 Constraint 442 533 5.5956 6.9945 13.9890 0.0672 Constraint 431 550 3.7263 4.6579 9.3158 0.0672 Constraint 417 558 4.7179 5.8974 11.7948 0.0672 Constraint 352 442 6.1791 7.7239 15.4478 0.0672 Constraint 308 453 3.5667 4.4584 8.9168 0.0672 Constraint 296 469 6.3857 7.9821 15.9642 0.0672 Constraint 109 367 4.0714 5.0893 10.1786 0.0672 Constraint 86 384 3.7540 4.6925 9.3849 0.0672 Constraint 330 484 5.6037 7.0046 14.0092 0.0668 Constraint 169 461 4.7138 5.8923 11.7846 0.0668 Constraint 164 431 3.7046 4.6308 9.2616 0.0668 Constraint 164 393 5.9271 7.4089 14.8178 0.0668 Constraint 144 359 4.7613 5.9517 11.9033 0.0668 Constraint 136 469 4.3127 5.3908 10.7817 0.0668 Constraint 3 308 6.1599 7.6998 15.3997 0.0668 Constraint 3 296 6.0298 7.5373 15.0745 0.0668 Constraint 136 352 6.0647 7.5809 15.1618 0.0660 Constraint 442 558 5.9809 7.4762 14.9523 0.0658 Constraint 277 558 5.7954 7.2442 14.4884 0.0658 Constraint 247 558 5.2784 6.5980 13.1960 0.0658 Constraint 222 516 4.1680 5.2100 10.4201 0.0658 Constraint 214 493 3.5942 4.4928 8.9855 0.0658 Constraint 255 558 6.2826 7.8533 15.7066 0.0654 Constraint 409 506 6.3974 7.9968 15.9936 0.0647 Constraint 93 374 5.9337 7.4171 14.8343 0.0647 Constraint 11 453 5.1380 6.4225 12.8451 0.0647 Constraint 269 469 6.1697 7.7121 15.4242 0.0635 Constraint 261 469 4.1957 5.2447 10.4894 0.0635 Constraint 255 525 4.5146 5.6432 11.2864 0.0635 Constraint 207 442 4.2502 5.3128 10.6256 0.0635 Constraint 199 550 4.6985 5.8731 11.7461 0.0635 Constraint 115 469 5.1042 6.3802 12.7604 0.0635 Constraint 109 476 5.1490 6.4363 12.8726 0.0635 Constraint 109 169 3.8618 4.8272 9.6544 0.0635 Constraint 409 516 5.0800 6.3500 12.7001 0.0621 Constraint 120 409 5.4153 6.7691 13.5382 0.0621 Constraint 81 442 5.6545 7.0682 14.1363 0.0621 Constraint 308 516 3.3834 4.2293 8.4586 0.0596 Constraint 296 417 5.9792 7.4740 14.9481 0.0596 Constraint 277 409 6.1155 7.6444 15.2888 0.0596 Constraint 461 550 5.8686 7.3357 14.6714 0.0583 Constraint 115 269 6.3458 7.9323 15.8645 0.0583 Constraint 109 230 6.2264 7.7830 15.5659 0.0583 Constraint 374 484 6.1844 7.7305 15.4610 0.0550 Constraint 367 558 4.2587 5.3234 10.6468 0.0550 Constraint 323 516 4.6539 5.8174 11.6348 0.0550 Constraint 290 533 5.7384 7.1730 14.3460 0.0550 Constraint 144 442 6.2267 7.7834 15.5668 0.0550 Constraint 22 230 6.1794 7.7242 15.4484 0.0550 Constraint 3 277 6.2516 7.8146 15.6291 0.0550 Constraint 3 261 4.5310 5.6638 11.3276 0.0550 Constraint 3 230 5.7636 7.2045 14.4089 0.0550 Constraint 189 558 5.8462 7.3078 14.6156 0.0520 Constraint 255 431 5.5348 6.9184 13.8369 0.0451 Constraint 230 550 3.6915 4.6144 9.2288 0.0451 Constraint 230 533 5.0284 6.2855 12.5710 0.0451 Constraint 230 525 3.1751 3.9689 7.9377 0.0451 Constraint 109 164 3.2535 4.0669 8.1337 0.0451 Constraint 3 453 4.1893 5.2366 10.4732 0.0451 Constraint 367 484 6.3210 7.9012 15.8024 0.0449 Constraint 409 544 3.9804 4.9755 9.9510 0.0441 Constraint 393 469 4.3161 5.3952 10.7903 0.0441 Constraint 315 476 4.5809 5.7261 11.4522 0.0441 Constraint 230 501 5.8938 7.3672 14.7345 0.0441 Constraint 164 544 5.1120 6.3900 12.7800 0.0441 Constraint 120 417 6.0980 7.6225 15.2450 0.0441 Constraint 22 330 5.6236 7.0295 14.0591 0.0441 Constraint 11 315 4.6693 5.8366 11.6732 0.0441 Constraint 11 261 4.3659 5.4573 10.9147 0.0441 Constraint 101 501 3.6679 4.5848 9.1697 0.0347 Constraint 65 431 6.1640 7.7050 15.4100 0.0347 Constraint 469 558 5.6213 7.0266 14.0532 0.0341 Constraint 417 516 5.6726 7.0908 14.1815 0.0341 Constraint 393 493 4.3209 5.4011 10.8023 0.0341 Constraint 269 533 6.2301 7.7876 15.5753 0.0341 Constraint 214 476 6.1534 7.6917 15.3835 0.0341 Constraint 177 516 3.2083 4.0103 8.0206 0.0341 Constraint 169 516 5.2220 6.5275 13.0550 0.0341 Constraint 152 401 4.6028 5.7536 11.5071 0.0341 Constraint 39 393 5.9290 7.4113 14.8226 0.0341 Constraint 476 544 5.7129 7.1411 14.2823 0.0336 Constraint 469 544 2.9221 3.6527 7.3054 0.0336 Constraint 453 558 3.9335 4.9169 9.8337 0.0336 Constraint 330 469 5.4968 6.8710 13.7419 0.0336 Constraint 247 442 4.1453 5.1817 10.3633 0.0336 Constraint 109 550 4.6081 5.7601 11.5203 0.0336 Constraint 101 550 4.6581 5.8226 11.6453 0.0336 Constraint 3 120 3.9605 4.9506 9.9012 0.0336 Constraint 461 558 4.5580 5.6975 11.3950 0.0324 Constraint 409 533 4.1127 5.1409 10.2818 0.0324 Constraint 277 476 5.8128 7.2661 14.5321 0.0324 Constraint 277 469 5.3172 6.6464 13.2929 0.0324 Constraint 277 417 3.5654 4.4567 8.9134 0.0324 Constraint 261 442 5.6879 7.1099 14.2198 0.0324 Constraint 199 469 6.3220 7.9026 15.8051 0.0324 Constraint 131 352 3.8376 4.7970 9.5939 0.0324 Constraint 115 417 6.3166 7.8957 15.7914 0.0324 Constraint 115 384 5.7454 7.1817 14.3635 0.0324 Constraint 109 384 4.0781 5.0977 10.1954 0.0324 Constraint 58 374 5.1934 6.4917 12.9834 0.0324 Constraint 31 222 5.2188 6.5235 13.0469 0.0324 Constraint 277 525 4.6245 5.7806 11.5612 0.0318 Constraint 261 533 5.9846 7.4807 14.9615 0.0318 Constraint 261 506 6.1080 7.6350 15.2701 0.0318 Constraint 255 501 4.6676 5.8345 11.6689 0.0318 Constraint 239 516 5.9563 7.4453 14.8907 0.0318 Constraint 214 558 6.2610 7.8263 15.6525 0.0318 Constraint 207 544 5.8759 7.3449 14.6899 0.0318 Constraint 207 493 3.9788 4.9735 9.9471 0.0318 Constraint 189 550 4.2151 5.2688 10.5377 0.0318 Constraint 189 544 5.1407 6.4259 12.8519 0.0318 Constraint 136 506 6.3526 7.9408 15.8816 0.0318 Constraint 131 544 6.3056 7.8820 15.7639 0.0318 Constraint 131 516 3.9170 4.8963 9.7925 0.0318 Constraint 58 469 6.2483 7.8104 15.6208 0.0318 Constraint 207 484 5.8400 7.3000 14.6000 0.0292 Constraint 164 516 6.3869 7.9836 15.9673 0.0292 Constraint 164 506 4.6284 5.7855 11.5710 0.0292 Constraint 101 544 4.7857 5.9821 11.9643 0.0043 Constraint 230 558 6.3357 7.9197 15.8394 0.0021 Constraint 550 558 0.8000 1.0000 2.0000 0.0000 Constraint 544 558 0.8000 1.0000 2.0000 0.0000 Constraint 544 550 0.8000 1.0000 2.0000 0.0000 Constraint 533 558 0.8000 1.0000 2.0000 0.0000 Constraint 533 550 0.8000 1.0000 2.0000 0.0000 Constraint 533 544 0.8000 1.0000 2.0000 0.0000 Constraint 525 558 0.8000 1.0000 2.0000 0.0000 Constraint 525 550 0.8000 1.0000 2.0000 0.0000 Constraint 525 544 0.8000 1.0000 2.0000 0.0000 Constraint 525 533 0.8000 1.0000 2.0000 0.0000 Constraint 516 558 0.8000 1.0000 2.0000 0.0000 Constraint 516 550 0.8000 1.0000 2.0000 0.0000 Constraint 516 544 0.8000 1.0000 2.0000 0.0000 Constraint 516 533 0.8000 1.0000 2.0000 0.0000 Constraint 516 525 0.8000 1.0000 2.0000 0.0000 Constraint 506 558 0.8000 1.0000 2.0000 0.0000 Constraint 506 550 0.8000 1.0000 2.0000 0.0000 Constraint 506 544 0.8000 1.0000 2.0000 0.0000 Constraint 506 533 0.8000 1.0000 2.0000 0.0000 Constraint 506 525 0.8000 1.0000 2.0000 0.0000 Constraint 506 516 0.8000 1.0000 2.0000 0.0000 Constraint 501 558 0.8000 1.0000 2.0000 0.0000 Constraint 501 550 0.8000 1.0000 2.0000 0.0000 Constraint 501 544 0.8000 1.0000 2.0000 0.0000 Constraint 501 533 0.8000 1.0000 2.0000 0.0000 Constraint 501 525 0.8000 1.0000 2.0000 0.0000 Constraint 501 516 0.8000 1.0000 2.0000 0.0000 Constraint 501 506 0.8000 1.0000 2.0000 0.0000 Constraint 493 558 0.8000 1.0000 2.0000 0.0000 Constraint 493 550 0.8000 1.0000 2.0000 0.0000 Constraint 493 544 0.8000 1.0000 2.0000 0.0000 Constraint 493 533 0.8000 1.0000 2.0000 0.0000 Constraint 493 525 0.8000 1.0000 2.0000 0.0000 Constraint 493 516 0.8000 1.0000 2.0000 0.0000 Constraint 493 506 0.8000 1.0000 2.0000 0.0000 Constraint 493 501 0.8000 1.0000 2.0000 0.0000 Constraint 484 544 0.8000 1.0000 2.0000 0.0000 Constraint 484 533 0.8000 1.0000 2.0000 0.0000 Constraint 484 525 0.8000 1.0000 2.0000 0.0000 Constraint 484 516 0.8000 1.0000 2.0000 0.0000 Constraint 484 506 0.8000 1.0000 2.0000 0.0000 Constraint 484 501 0.8000 1.0000 2.0000 0.0000 Constraint 484 493 0.8000 1.0000 2.0000 0.0000 Constraint 476 533 0.8000 1.0000 2.0000 0.0000 Constraint 476 525 0.8000 1.0000 2.0000 0.0000 Constraint 476 516 0.8000 1.0000 2.0000 0.0000 Constraint 476 506 0.8000 1.0000 2.0000 0.0000 Constraint 476 501 0.8000 1.0000 2.0000 0.0000 Constraint 476 493 0.8000 1.0000 2.0000 0.0000 Constraint 476 484 0.8000 1.0000 2.0000 0.0000 Constraint 469 525 0.8000 1.0000 2.0000 0.0000 Constraint 469 516 0.8000 1.0000 2.0000 0.0000 Constraint 469 506 0.8000 1.0000 2.0000 0.0000 Constraint 469 501 0.8000 1.0000 2.0000 0.0000 Constraint 469 493 0.8000 1.0000 2.0000 0.0000 Constraint 469 484 0.8000 1.0000 2.0000 0.0000 Constraint 469 476 0.8000 1.0000 2.0000 0.0000 Constraint 461 516 0.8000 1.0000 2.0000 0.0000 Constraint 461 506 0.8000 1.0000 2.0000 0.0000 Constraint 461 501 0.8000 1.0000 2.0000 0.0000 Constraint 461 493 0.8000 1.0000 2.0000 0.0000 Constraint 461 484 0.8000 1.0000 2.0000 0.0000 Constraint 461 476 0.8000 1.0000 2.0000 0.0000 Constraint 461 469 0.8000 1.0000 2.0000 0.0000 Constraint 453 516 0.8000 1.0000 2.0000 0.0000 Constraint 453 506 0.8000 1.0000 2.0000 0.0000 Constraint 453 501 0.8000 1.0000 2.0000 0.0000 Constraint 453 493 0.8000 1.0000 2.0000 0.0000 Constraint 453 484 0.8000 1.0000 2.0000 0.0000 Constraint 453 476 0.8000 1.0000 2.0000 0.0000 Constraint 453 469 0.8000 1.0000 2.0000 0.0000 Constraint 453 461 0.8000 1.0000 2.0000 0.0000 Constraint 442 516 0.8000 1.0000 2.0000 0.0000 Constraint 442 506 0.8000 1.0000 2.0000 0.0000 Constraint 442 501 0.8000 1.0000 2.0000 0.0000 Constraint 442 493 0.8000 1.0000 2.0000 0.0000 Constraint 442 484 0.8000 1.0000 2.0000 0.0000 Constraint 442 476 0.8000 1.0000 2.0000 0.0000 Constraint 442 469 0.8000 1.0000 2.0000 0.0000 Constraint 442 461 0.8000 1.0000 2.0000 0.0000 Constraint 442 453 0.8000 1.0000 2.0000 0.0000 Constraint 431 493 0.8000 1.0000 2.0000 0.0000 Constraint 431 484 0.8000 1.0000 2.0000 0.0000 Constraint 431 476 0.8000 1.0000 2.0000 0.0000 Constraint 431 469 0.8000 1.0000 2.0000 0.0000 Constraint 431 461 0.8000 1.0000 2.0000 0.0000 Constraint 431 453 0.8000 1.0000 2.0000 0.0000 Constraint 431 442 0.8000 1.0000 2.0000 0.0000 Constraint 426 484 0.8000 1.0000 2.0000 0.0000 Constraint 426 476 0.8000 1.0000 2.0000 0.0000 Constraint 426 469 0.8000 1.0000 2.0000 0.0000 Constraint 426 461 0.8000 1.0000 2.0000 0.0000 Constraint 426 453 0.8000 1.0000 2.0000 0.0000 Constraint 426 442 0.8000 1.0000 2.0000 0.0000 Constraint 426 431 0.8000 1.0000 2.0000 0.0000 Constraint 417 544 0.8000 1.0000 2.0000 0.0000 Constraint 417 476 0.8000 1.0000 2.0000 0.0000 Constraint 417 469 0.8000 1.0000 2.0000 0.0000 Constraint 417 461 0.8000 1.0000 2.0000 0.0000 Constraint 417 453 0.8000 1.0000 2.0000 0.0000 Constraint 417 442 0.8000 1.0000 2.0000 0.0000 Constraint 417 431 0.8000 1.0000 2.0000 0.0000 Constraint 417 426 0.8000 1.0000 2.0000 0.0000 Constraint 409 469 0.8000 1.0000 2.0000 0.0000 Constraint 409 461 0.8000 1.0000 2.0000 0.0000 Constraint 409 453 0.8000 1.0000 2.0000 0.0000 Constraint 409 442 0.8000 1.0000 2.0000 0.0000 Constraint 409 431 0.8000 1.0000 2.0000 0.0000 Constraint 409 426 0.8000 1.0000 2.0000 0.0000 Constraint 409 417 0.8000 1.0000 2.0000 0.0000 Constraint 401 493 0.8000 1.0000 2.0000 0.0000 Constraint 401 461 0.8000 1.0000 2.0000 0.0000 Constraint 401 453 0.8000 1.0000 2.0000 0.0000 Constraint 401 442 0.8000 1.0000 2.0000 0.0000 Constraint 401 431 0.8000 1.0000 2.0000 0.0000 Constraint 401 426 0.8000 1.0000 2.0000 0.0000 Constraint 401 417 0.8000 1.0000 2.0000 0.0000 Constraint 401 409 0.8000 1.0000 2.0000 0.0000 Constraint 393 525 0.8000 1.0000 2.0000 0.0000 Constraint 393 453 0.8000 1.0000 2.0000 0.0000 Constraint 393 442 0.8000 1.0000 2.0000 0.0000 Constraint 393 431 0.8000 1.0000 2.0000 0.0000 Constraint 393 426 0.8000 1.0000 2.0000 0.0000 Constraint 393 417 0.8000 1.0000 2.0000 0.0000 Constraint 393 409 0.8000 1.0000 2.0000 0.0000 Constraint 393 401 0.8000 1.0000 2.0000 0.0000 Constraint 384 476 0.8000 1.0000 2.0000 0.0000 Constraint 384 442 0.8000 1.0000 2.0000 0.0000 Constraint 384 431 0.8000 1.0000 2.0000 0.0000 Constraint 384 426 0.8000 1.0000 2.0000 0.0000 Constraint 384 417 0.8000 1.0000 2.0000 0.0000 Constraint 384 409 0.8000 1.0000 2.0000 0.0000 Constraint 384 401 0.8000 1.0000 2.0000 0.0000 Constraint 384 393 0.8000 1.0000 2.0000 0.0000 Constraint 374 461 0.8000 1.0000 2.0000 0.0000 Constraint 374 431 0.8000 1.0000 2.0000 0.0000 Constraint 374 426 0.8000 1.0000 2.0000 0.0000 Constraint 374 417 0.8000 1.0000 2.0000 0.0000 Constraint 374 409 0.8000 1.0000 2.0000 0.0000 Constraint 374 401 0.8000 1.0000 2.0000 0.0000 Constraint 374 393 0.8000 1.0000 2.0000 0.0000 Constraint 374 384 0.8000 1.0000 2.0000 0.0000 Constraint 367 550 0.8000 1.0000 2.0000 0.0000 Constraint 367 426 0.8000 1.0000 2.0000 0.0000 Constraint 367 417 0.8000 1.0000 2.0000 0.0000 Constraint 367 409 0.8000 1.0000 2.0000 0.0000 Constraint 367 401 0.8000 1.0000 2.0000 0.0000 Constraint 367 393 0.8000 1.0000 2.0000 0.0000 Constraint 367 384 0.8000 1.0000 2.0000 0.0000 Constraint 367 374 0.8000 1.0000 2.0000 0.0000 Constraint 359 550 0.8000 1.0000 2.0000 0.0000 Constraint 359 417 0.8000 1.0000 2.0000 0.0000 Constraint 359 409 0.8000 1.0000 2.0000 0.0000 Constraint 359 401 0.8000 1.0000 2.0000 0.0000 Constraint 359 393 0.8000 1.0000 2.0000 0.0000 Constraint 359 384 0.8000 1.0000 2.0000 0.0000 Constraint 359 374 0.8000 1.0000 2.0000 0.0000 Constraint 359 367 0.8000 1.0000 2.0000 0.0000 Constraint 352 417 0.8000 1.0000 2.0000 0.0000 Constraint 352 409 0.8000 1.0000 2.0000 0.0000 Constraint 352 401 0.8000 1.0000 2.0000 0.0000 Constraint 352 393 0.8000 1.0000 2.0000 0.0000 Constraint 352 384 0.8000 1.0000 2.0000 0.0000 Constraint 352 374 0.8000 1.0000 2.0000 0.0000 Constraint 352 367 0.8000 1.0000 2.0000 0.0000 Constraint 352 359 0.8000 1.0000 2.0000 0.0000 Constraint 341 469 0.8000 1.0000 2.0000 0.0000 Constraint 341 409 0.8000 1.0000 2.0000 0.0000 Constraint 341 401 0.8000 1.0000 2.0000 0.0000 Constraint 341 393 0.8000 1.0000 2.0000 0.0000 Constraint 341 384 0.8000 1.0000 2.0000 0.0000 Constraint 341 374 0.8000 1.0000 2.0000 0.0000 Constraint 341 367 0.8000 1.0000 2.0000 0.0000 Constraint 341 359 0.8000 1.0000 2.0000 0.0000 Constraint 341 352 0.8000 1.0000 2.0000 0.0000 Constraint 330 401 0.8000 1.0000 2.0000 0.0000 Constraint 330 393 0.8000 1.0000 2.0000 0.0000 Constraint 330 384 0.8000 1.0000 2.0000 0.0000 Constraint 330 374 0.8000 1.0000 2.0000 0.0000 Constraint 330 367 0.8000 1.0000 2.0000 0.0000 Constraint 330 359 0.8000 1.0000 2.0000 0.0000 Constraint 330 352 0.8000 1.0000 2.0000 0.0000 Constraint 330 341 0.8000 1.0000 2.0000 0.0000 Constraint 323 393 0.8000 1.0000 2.0000 0.0000 Constraint 323 384 0.8000 1.0000 2.0000 0.0000 Constraint 323 374 0.8000 1.0000 2.0000 0.0000 Constraint 323 367 0.8000 1.0000 2.0000 0.0000 Constraint 323 359 0.8000 1.0000 2.0000 0.0000 Constraint 323 352 0.8000 1.0000 2.0000 0.0000 Constraint 323 341 0.8000 1.0000 2.0000 0.0000 Constraint 323 330 0.8000 1.0000 2.0000 0.0000 Constraint 315 501 0.8000 1.0000 2.0000 0.0000 Constraint 315 384 0.8000 1.0000 2.0000 0.0000 Constraint 315 374 0.8000 1.0000 2.0000 0.0000 Constraint 315 367 0.8000 1.0000 2.0000 0.0000 Constraint 315 359 0.8000 1.0000 2.0000 0.0000 Constraint 315 352 0.8000 1.0000 2.0000 0.0000 Constraint 315 341 0.8000 1.0000 2.0000 0.0000 Constraint 315 330 0.8000 1.0000 2.0000 0.0000 Constraint 315 323 0.8000 1.0000 2.0000 0.0000 Constraint 308 501 0.8000 1.0000 2.0000 0.0000 Constraint 308 417 0.8000 1.0000 2.0000 0.0000 Constraint 308 374 0.8000 1.0000 2.0000 0.0000 Constraint 308 367 0.8000 1.0000 2.0000 0.0000 Constraint 308 359 0.8000 1.0000 2.0000 0.0000 Constraint 308 352 0.8000 1.0000 2.0000 0.0000 Constraint 308 341 0.8000 1.0000 2.0000 0.0000 Constraint 308 330 0.8000 1.0000 2.0000 0.0000 Constraint 308 323 0.8000 1.0000 2.0000 0.0000 Constraint 308 315 0.8000 1.0000 2.0000 0.0000 Constraint 296 558 0.8000 1.0000 2.0000 0.0000 Constraint 296 359 0.8000 1.0000 2.0000 0.0000 Constraint 296 352 0.8000 1.0000 2.0000 0.0000 Constraint 296 341 0.8000 1.0000 2.0000 0.0000 Constraint 296 330 0.8000 1.0000 2.0000 0.0000 Constraint 296 323 0.8000 1.0000 2.0000 0.0000 Constraint 296 315 0.8000 1.0000 2.0000 0.0000 Constraint 296 308 0.8000 1.0000 2.0000 0.0000 Constraint 290 352 0.8000 1.0000 2.0000 0.0000 Constraint 290 341 0.8000 1.0000 2.0000 0.0000 Constraint 290 330 0.8000 1.0000 2.0000 0.0000 Constraint 290 323 0.8000 1.0000 2.0000 0.0000 Constraint 290 315 0.8000 1.0000 2.0000 0.0000 Constraint 290 308 0.8000 1.0000 2.0000 0.0000 Constraint 290 296 0.8000 1.0000 2.0000 0.0000 Constraint 277 544 0.8000 1.0000 2.0000 0.0000 Constraint 277 442 0.8000 1.0000 2.0000 0.0000 Constraint 277 431 0.8000 1.0000 2.0000 0.0000 Constraint 277 330 0.8000 1.0000 2.0000 0.0000 Constraint 277 323 0.8000 1.0000 2.0000 0.0000 Constraint 277 315 0.8000 1.0000 2.0000 0.0000 Constraint 277 308 0.8000 1.0000 2.0000 0.0000 Constraint 277 296 0.8000 1.0000 2.0000 0.0000 Constraint 277 290 0.8000 1.0000 2.0000 0.0000 Constraint 269 558 0.8000 1.0000 2.0000 0.0000 Constraint 269 323 0.8000 1.0000 2.0000 0.0000 Constraint 269 315 0.8000 1.0000 2.0000 0.0000 Constraint 269 308 0.8000 1.0000 2.0000 0.0000 Constraint 269 296 0.8000 1.0000 2.0000 0.0000 Constraint 269 290 0.8000 1.0000 2.0000 0.0000 Constraint 269 277 0.8000 1.0000 2.0000 0.0000 Constraint 261 558 0.8000 1.0000 2.0000 0.0000 Constraint 261 550 0.8000 1.0000 2.0000 0.0000 Constraint 261 516 0.8000 1.0000 2.0000 0.0000 Constraint 261 501 0.8000 1.0000 2.0000 0.0000 Constraint 261 476 0.8000 1.0000 2.0000 0.0000 Constraint 261 315 0.8000 1.0000 2.0000 0.0000 Constraint 261 308 0.8000 1.0000 2.0000 0.0000 Constraint 261 296 0.8000 1.0000 2.0000 0.0000 Constraint 261 290 0.8000 1.0000 2.0000 0.0000 Constraint 261 277 0.8000 1.0000 2.0000 0.0000 Constraint 261 269 0.8000 1.0000 2.0000 0.0000 Constraint 255 516 0.8000 1.0000 2.0000 0.0000 Constraint 255 476 0.8000 1.0000 2.0000 0.0000 Constraint 255 469 0.8000 1.0000 2.0000 0.0000 Constraint 255 453 0.8000 1.0000 2.0000 0.0000 Constraint 255 442 0.8000 1.0000 2.0000 0.0000 Constraint 255 308 0.8000 1.0000 2.0000 0.0000 Constraint 255 296 0.8000 1.0000 2.0000 0.0000 Constraint 255 290 0.8000 1.0000 2.0000 0.0000 Constraint 255 277 0.8000 1.0000 2.0000 0.0000 Constraint 255 269 0.8000 1.0000 2.0000 0.0000 Constraint 255 261 0.8000 1.0000 2.0000 0.0000 Constraint 247 533 0.8000 1.0000 2.0000 0.0000 Constraint 247 484 0.8000 1.0000 2.0000 0.0000 Constraint 247 476 0.8000 1.0000 2.0000 0.0000 Constraint 247 469 0.8000 1.0000 2.0000 0.0000 Constraint 247 417 0.8000 1.0000 2.0000 0.0000 Constraint 247 296 0.8000 1.0000 2.0000 0.0000 Constraint 247 290 0.8000 1.0000 2.0000 0.0000 Constraint 247 277 0.8000 1.0000 2.0000 0.0000 Constraint 247 269 0.8000 1.0000 2.0000 0.0000 Constraint 247 261 0.8000 1.0000 2.0000 0.0000 Constraint 247 255 0.8000 1.0000 2.0000 0.0000 Constraint 239 558 0.8000 1.0000 2.0000 0.0000 Constraint 239 533 0.8000 1.0000 2.0000 0.0000 Constraint 239 501 0.8000 1.0000 2.0000 0.0000 Constraint 239 469 0.8000 1.0000 2.0000 0.0000 Constraint 239 296 0.8000 1.0000 2.0000 0.0000 Constraint 239 290 0.8000 1.0000 2.0000 0.0000 Constraint 239 277 0.8000 1.0000 2.0000 0.0000 Constraint 239 269 0.8000 1.0000 2.0000 0.0000 Constraint 239 261 0.8000 1.0000 2.0000 0.0000 Constraint 239 255 0.8000 1.0000 2.0000 0.0000 Constraint 239 247 0.8000 1.0000 2.0000 0.0000 Constraint 230 506 0.8000 1.0000 2.0000 0.0000 Constraint 230 493 0.8000 1.0000 2.0000 0.0000 Constraint 230 484 0.8000 1.0000 2.0000 0.0000 Constraint 230 290 0.8000 1.0000 2.0000 0.0000 Constraint 230 277 0.8000 1.0000 2.0000 0.0000 Constraint 230 269 0.8000 1.0000 2.0000 0.0000 Constraint 230 261 0.8000 1.0000 2.0000 0.0000 Constraint 230 255 0.8000 1.0000 2.0000 0.0000 Constraint 230 247 0.8000 1.0000 2.0000 0.0000 Constraint 230 239 0.8000 1.0000 2.0000 0.0000 Constraint 222 558 0.8000 1.0000 2.0000 0.0000 Constraint 222 506 0.8000 1.0000 2.0000 0.0000 Constraint 222 501 0.8000 1.0000 2.0000 0.0000 Constraint 222 493 0.8000 1.0000 2.0000 0.0000 Constraint 222 476 0.8000 1.0000 2.0000 0.0000 Constraint 222 469 0.8000 1.0000 2.0000 0.0000 Constraint 222 461 0.8000 1.0000 2.0000 0.0000 Constraint 222 277 0.8000 1.0000 2.0000 0.0000 Constraint 222 269 0.8000 1.0000 2.0000 0.0000 Constraint 222 261 0.8000 1.0000 2.0000 0.0000 Constraint 222 255 0.8000 1.0000 2.0000 0.0000 Constraint 222 247 0.8000 1.0000 2.0000 0.0000 Constraint 222 239 0.8000 1.0000 2.0000 0.0000 Constraint 222 230 0.8000 1.0000 2.0000 0.0000 Constraint 214 501 0.8000 1.0000 2.0000 0.0000 Constraint 214 469 0.8000 1.0000 2.0000 0.0000 Constraint 214 277 0.8000 1.0000 2.0000 0.0000 Constraint 214 269 0.8000 1.0000 2.0000 0.0000 Constraint 214 261 0.8000 1.0000 2.0000 0.0000 Constraint 214 255 0.8000 1.0000 2.0000 0.0000 Constraint 214 247 0.8000 1.0000 2.0000 0.0000 Constraint 214 239 0.8000 1.0000 2.0000 0.0000 Constraint 214 230 0.8000 1.0000 2.0000 0.0000 Constraint 214 222 0.8000 1.0000 2.0000 0.0000 Constraint 207 501 0.8000 1.0000 2.0000 0.0000 Constraint 207 476 0.8000 1.0000 2.0000 0.0000 Constraint 207 384 0.8000 1.0000 2.0000 0.0000 Constraint 207 269 0.8000 1.0000 2.0000 0.0000 Constraint 207 261 0.8000 1.0000 2.0000 0.0000 Constraint 207 255 0.8000 1.0000 2.0000 0.0000 Constraint 207 247 0.8000 1.0000 2.0000 0.0000 Constraint 207 239 0.8000 1.0000 2.0000 0.0000 Constraint 207 230 0.8000 1.0000 2.0000 0.0000 Constraint 207 222 0.8000 1.0000 2.0000 0.0000 Constraint 207 214 0.8000 1.0000 2.0000 0.0000 Constraint 199 261 0.8000 1.0000 2.0000 0.0000 Constraint 199 255 0.8000 1.0000 2.0000 0.0000 Constraint 199 247 0.8000 1.0000 2.0000 0.0000 Constraint 199 239 0.8000 1.0000 2.0000 0.0000 Constraint 199 230 0.8000 1.0000 2.0000 0.0000 Constraint 199 222 0.8000 1.0000 2.0000 0.0000 Constraint 199 214 0.8000 1.0000 2.0000 0.0000 Constraint 199 207 0.8000 1.0000 2.0000 0.0000 Constraint 189 442 0.8000 1.0000 2.0000 0.0000 Constraint 189 255 0.8000 1.0000 2.0000 0.0000 Constraint 189 247 0.8000 1.0000 2.0000 0.0000 Constraint 189 239 0.8000 1.0000 2.0000 0.0000 Constraint 189 230 0.8000 1.0000 2.0000 0.0000 Constraint 189 222 0.8000 1.0000 2.0000 0.0000 Constraint 189 214 0.8000 1.0000 2.0000 0.0000 Constraint 189 207 0.8000 1.0000 2.0000 0.0000 Constraint 189 199 0.8000 1.0000 2.0000 0.0000 Constraint 177 239 0.8000 1.0000 2.0000 0.0000 Constraint 177 230 0.8000 1.0000 2.0000 0.0000 Constraint 177 222 0.8000 1.0000 2.0000 0.0000 Constraint 177 214 0.8000 1.0000 2.0000 0.0000 Constraint 177 207 0.8000 1.0000 2.0000 0.0000 Constraint 177 199 0.8000 1.0000 2.0000 0.0000 Constraint 177 189 0.8000 1.0000 2.0000 0.0000 Constraint 169 533 0.8000 1.0000 2.0000 0.0000 Constraint 169 525 0.8000 1.0000 2.0000 0.0000 Constraint 169 506 0.8000 1.0000 2.0000 0.0000 Constraint 169 469 0.8000 1.0000 2.0000 0.0000 Constraint 169 417 0.8000 1.0000 2.0000 0.0000 Constraint 169 359 0.8000 1.0000 2.0000 0.0000 Constraint 169 230 0.8000 1.0000 2.0000 0.0000 Constraint 169 222 0.8000 1.0000 2.0000 0.0000 Constraint 169 214 0.8000 1.0000 2.0000 0.0000 Constraint 169 207 0.8000 1.0000 2.0000 0.0000 Constraint 169 199 0.8000 1.0000 2.0000 0.0000 Constraint 169 189 0.8000 1.0000 2.0000 0.0000 Constraint 169 177 0.8000 1.0000 2.0000 0.0000 Constraint 164 525 0.8000 1.0000 2.0000 0.0000 Constraint 164 501 0.8000 1.0000 2.0000 0.0000 Constraint 164 409 0.8000 1.0000 2.0000 0.0000 Constraint 164 359 0.8000 1.0000 2.0000 0.0000 Constraint 164 352 0.8000 1.0000 2.0000 0.0000 Constraint 164 247 0.8000 1.0000 2.0000 0.0000 Constraint 164 222 0.8000 1.0000 2.0000 0.0000 Constraint 164 214 0.8000 1.0000 2.0000 0.0000 Constraint 164 207 0.8000 1.0000 2.0000 0.0000 Constraint 164 199 0.8000 1.0000 2.0000 0.0000 Constraint 164 189 0.8000 1.0000 2.0000 0.0000 Constraint 164 177 0.8000 1.0000 2.0000 0.0000 Constraint 164 169 0.8000 1.0000 2.0000 0.0000 Constraint 152 550 0.8000 1.0000 2.0000 0.0000 Constraint 152 506 0.8000 1.0000 2.0000 0.0000 Constraint 152 469 0.8000 1.0000 2.0000 0.0000 Constraint 152 393 0.8000 1.0000 2.0000 0.0000 Constraint 152 374 0.8000 1.0000 2.0000 0.0000 Constraint 152 359 0.8000 1.0000 2.0000 0.0000 Constraint 152 207 0.8000 1.0000 2.0000 0.0000 Constraint 152 199 0.8000 1.0000 2.0000 0.0000 Constraint 152 189 0.8000 1.0000 2.0000 0.0000 Constraint 152 177 0.8000 1.0000 2.0000 0.0000 Constraint 152 169 0.8000 1.0000 2.0000 0.0000 Constraint 152 164 0.8000 1.0000 2.0000 0.0000 Constraint 144 558 0.8000 1.0000 2.0000 0.0000 Constraint 144 544 0.8000 1.0000 2.0000 0.0000 Constraint 144 516 0.8000 1.0000 2.0000 0.0000 Constraint 144 506 0.8000 1.0000 2.0000 0.0000 Constraint 144 501 0.8000 1.0000 2.0000 0.0000 Constraint 144 431 0.8000 1.0000 2.0000 0.0000 Constraint 144 199 0.8000 1.0000 2.0000 0.0000 Constraint 144 189 0.8000 1.0000 2.0000 0.0000 Constraint 144 177 0.8000 1.0000 2.0000 0.0000 Constraint 144 169 0.8000 1.0000 2.0000 0.0000 Constraint 144 164 0.8000 1.0000 2.0000 0.0000 Constraint 144 152 0.8000 1.0000 2.0000 0.0000 Constraint 136 558 0.8000 1.0000 2.0000 0.0000 Constraint 136 550 0.8000 1.0000 2.0000 0.0000 Constraint 136 189 0.8000 1.0000 2.0000 0.0000 Constraint 136 177 0.8000 1.0000 2.0000 0.0000 Constraint 136 169 0.8000 1.0000 2.0000 0.0000 Constraint 136 164 0.8000 1.0000 2.0000 0.0000 Constraint 136 152 0.8000 1.0000 2.0000 0.0000 Constraint 136 144 0.8000 1.0000 2.0000 0.0000 Constraint 131 550 0.8000 1.0000 2.0000 0.0000 Constraint 131 533 0.8000 1.0000 2.0000 0.0000 Constraint 131 506 0.8000 1.0000 2.0000 0.0000 Constraint 131 417 0.8000 1.0000 2.0000 0.0000 Constraint 131 177 0.8000 1.0000 2.0000 0.0000 Constraint 131 169 0.8000 1.0000 2.0000 0.0000 Constraint 131 164 0.8000 1.0000 2.0000 0.0000 Constraint 131 152 0.8000 1.0000 2.0000 0.0000 Constraint 131 144 0.8000 1.0000 2.0000 0.0000 Constraint 131 136 0.8000 1.0000 2.0000 0.0000 Constraint 120 558 0.8000 1.0000 2.0000 0.0000 Constraint 120 550 0.8000 1.0000 2.0000 0.0000 Constraint 120 544 0.8000 1.0000 2.0000 0.0000 Constraint 120 533 0.8000 1.0000 2.0000 0.0000 Constraint 120 525 0.8000 1.0000 2.0000 0.0000 Constraint 120 431 0.8000 1.0000 2.0000 0.0000 Constraint 120 393 0.8000 1.0000 2.0000 0.0000 Constraint 120 169 0.8000 1.0000 2.0000 0.0000 Constraint 120 164 0.8000 1.0000 2.0000 0.0000 Constraint 120 152 0.8000 1.0000 2.0000 0.0000 Constraint 120 144 0.8000 1.0000 2.0000 0.0000 Constraint 120 136 0.8000 1.0000 2.0000 0.0000 Constraint 120 131 0.8000 1.0000 2.0000 0.0000 Constraint 115 550 0.8000 1.0000 2.0000 0.0000 Constraint 115 442 0.8000 1.0000 2.0000 0.0000 Constraint 115 164 0.8000 1.0000 2.0000 0.0000 Constraint 115 152 0.8000 1.0000 2.0000 0.0000 Constraint 115 144 0.8000 1.0000 2.0000 0.0000 Constraint 115 136 0.8000 1.0000 2.0000 0.0000 Constraint 115 131 0.8000 1.0000 2.0000 0.0000 Constraint 115 120 0.8000 1.0000 2.0000 0.0000 Constraint 109 558 0.8000 1.0000 2.0000 0.0000 Constraint 109 461 0.8000 1.0000 2.0000 0.0000 Constraint 109 442 0.8000 1.0000 2.0000 0.0000 Constraint 109 417 0.8000 1.0000 2.0000 0.0000 Constraint 109 393 0.8000 1.0000 2.0000 0.0000 Constraint 109 277 0.8000 1.0000 2.0000 0.0000 Constraint 109 152 0.8000 1.0000 2.0000 0.0000 Constraint 109 144 0.8000 1.0000 2.0000 0.0000 Constraint 109 136 0.8000 1.0000 2.0000 0.0000 Constraint 109 131 0.8000 1.0000 2.0000 0.0000 Constraint 109 120 0.8000 1.0000 2.0000 0.0000 Constraint 109 115 0.8000 1.0000 2.0000 0.0000 Constraint 101 558 0.8000 1.0000 2.0000 0.0000 Constraint 101 469 0.8000 1.0000 2.0000 0.0000 Constraint 101 417 0.8000 1.0000 2.0000 0.0000 Constraint 101 409 0.8000 1.0000 2.0000 0.0000 Constraint 101 393 0.8000 1.0000 2.0000 0.0000 Constraint 101 384 0.8000 1.0000 2.0000 0.0000 Constraint 101 374 0.8000 1.0000 2.0000 0.0000 Constraint 101 152 0.8000 1.0000 2.0000 0.0000 Constraint 101 144 0.8000 1.0000 2.0000 0.0000 Constraint 101 136 0.8000 1.0000 2.0000 0.0000 Constraint 101 131 0.8000 1.0000 2.0000 0.0000 Constraint 101 120 0.8000 1.0000 2.0000 0.0000 Constraint 101 115 0.8000 1.0000 2.0000 0.0000 Constraint 101 109 0.8000 1.0000 2.0000 0.0000 Constraint 93 393 0.8000 1.0000 2.0000 0.0000 Constraint 93 169 0.8000 1.0000 2.0000 0.0000 Constraint 93 144 0.8000 1.0000 2.0000 0.0000 Constraint 93 136 0.8000 1.0000 2.0000 0.0000 Constraint 93 131 0.8000 1.0000 2.0000 0.0000 Constraint 93 120 0.8000 1.0000 2.0000 0.0000 Constraint 93 115 0.8000 1.0000 2.0000 0.0000 Constraint 93 109 0.8000 1.0000 2.0000 0.0000 Constraint 93 101 0.8000 1.0000 2.0000 0.0000 Constraint 86 550 0.8000 1.0000 2.0000 0.0000 Constraint 86 469 0.8000 1.0000 2.0000 0.0000 Constraint 86 453 0.8000 1.0000 2.0000 0.0000 Constraint 86 442 0.8000 1.0000 2.0000 0.0000 Constraint 86 417 0.8000 1.0000 2.0000 0.0000 Constraint 86 393 0.8000 1.0000 2.0000 0.0000 Constraint 86 169 0.8000 1.0000 2.0000 0.0000 Constraint 86 136 0.8000 1.0000 2.0000 0.0000 Constraint 86 131 0.8000 1.0000 2.0000 0.0000 Constraint 86 120 0.8000 1.0000 2.0000 0.0000 Constraint 86 115 0.8000 1.0000 2.0000 0.0000 Constraint 86 109 0.8000 1.0000 2.0000 0.0000 Constraint 86 101 0.8000 1.0000 2.0000 0.0000 Constraint 86 93 0.8000 1.0000 2.0000 0.0000 Constraint 81 131 0.8000 1.0000 2.0000 0.0000 Constraint 81 120 0.8000 1.0000 2.0000 0.0000 Constraint 81 115 0.8000 1.0000 2.0000 0.0000 Constraint 81 109 0.8000 1.0000 2.0000 0.0000 Constraint 81 101 0.8000 1.0000 2.0000 0.0000 Constraint 81 93 0.8000 1.0000 2.0000 0.0000 Constraint 81 86 0.8000 1.0000 2.0000 0.0000 Constraint 73 558 0.8000 1.0000 2.0000 0.0000 Constraint 73 120 0.8000 1.0000 2.0000 0.0000 Constraint 73 115 0.8000 1.0000 2.0000 0.0000 Constraint 73 109 0.8000 1.0000 2.0000 0.0000 Constraint 73 101 0.8000 1.0000 2.0000 0.0000 Constraint 73 93 0.8000 1.0000 2.0000 0.0000 Constraint 73 86 0.8000 1.0000 2.0000 0.0000 Constraint 73 81 0.8000 1.0000 2.0000 0.0000 Constraint 65 417 0.8000 1.0000 2.0000 0.0000 Constraint 65 199 0.8000 1.0000 2.0000 0.0000 Constraint 65 120 0.8000 1.0000 2.0000 0.0000 Constraint 65 115 0.8000 1.0000 2.0000 0.0000 Constraint 65 109 0.8000 1.0000 2.0000 0.0000 Constraint 65 101 0.8000 1.0000 2.0000 0.0000 Constraint 65 93 0.8000 1.0000 2.0000 0.0000 Constraint 65 86 0.8000 1.0000 2.0000 0.0000 Constraint 65 81 0.8000 1.0000 2.0000 0.0000 Constraint 65 73 0.8000 1.0000 2.0000 0.0000 Constraint 58 401 0.8000 1.0000 2.0000 0.0000 Constraint 58 393 0.8000 1.0000 2.0000 0.0000 Constraint 58 199 0.8000 1.0000 2.0000 0.0000 Constraint 58 115 0.8000 1.0000 2.0000 0.0000 Constraint 58 109 0.8000 1.0000 2.0000 0.0000 Constraint 58 101 0.8000 1.0000 2.0000 0.0000 Constraint 58 93 0.8000 1.0000 2.0000 0.0000 Constraint 58 86 0.8000 1.0000 2.0000 0.0000 Constraint 58 81 0.8000 1.0000 2.0000 0.0000 Constraint 58 73 0.8000 1.0000 2.0000 0.0000 Constraint 58 65 0.8000 1.0000 2.0000 0.0000 Constraint 47 109 0.8000 1.0000 2.0000 0.0000 Constraint 47 101 0.8000 1.0000 2.0000 0.0000 Constraint 47 93 0.8000 1.0000 2.0000 0.0000 Constraint 47 86 0.8000 1.0000 2.0000 0.0000 Constraint 47 81 0.8000 1.0000 2.0000 0.0000 Constraint 47 73 0.8000 1.0000 2.0000 0.0000 Constraint 47 65 0.8000 1.0000 2.0000 0.0000 Constraint 47 58 0.8000 1.0000 2.0000 0.0000 Constraint 39 417 0.8000 1.0000 2.0000 0.0000 Constraint 39 109 0.8000 1.0000 2.0000 0.0000 Constraint 39 101 0.8000 1.0000 2.0000 0.0000 Constraint 39 93 0.8000 1.0000 2.0000 0.0000 Constraint 39 86 0.8000 1.0000 2.0000 0.0000 Constraint 39 81 0.8000 1.0000 2.0000 0.0000 Constraint 39 73 0.8000 1.0000 2.0000 0.0000 Constraint 39 65 0.8000 1.0000 2.0000 0.0000 Constraint 39 58 0.8000 1.0000 2.0000 0.0000 Constraint 39 47 0.8000 1.0000 2.0000 0.0000 Constraint 31 93 0.8000 1.0000 2.0000 0.0000 Constraint 31 86 0.8000 1.0000 2.0000 0.0000 Constraint 31 81 0.8000 1.0000 2.0000 0.0000 Constraint 31 73 0.8000 1.0000 2.0000 0.0000 Constraint 31 65 0.8000 1.0000 2.0000 0.0000 Constraint 31 58 0.8000 1.0000 2.0000 0.0000 Constraint 31 47 0.8000 1.0000 2.0000 0.0000 Constraint 31 39 0.8000 1.0000 2.0000 0.0000 Constraint 22 550 0.8000 1.0000 2.0000 0.0000 Constraint 22 401 0.8000 1.0000 2.0000 0.0000 Constraint 22 86 0.8000 1.0000 2.0000 0.0000 Constraint 22 81 0.8000 1.0000 2.0000 0.0000 Constraint 22 73 0.8000 1.0000 2.0000 0.0000 Constraint 22 65 0.8000 1.0000 2.0000 0.0000 Constraint 22 58 0.8000 1.0000 2.0000 0.0000 Constraint 22 47 0.8000 1.0000 2.0000 0.0000 Constraint 22 39 0.8000 1.0000 2.0000 0.0000 Constraint 22 31 0.8000 1.0000 2.0000 0.0000 Constraint 11 558 0.8000 1.0000 2.0000 0.0000 Constraint 11 393 0.8000 1.0000 2.0000 0.0000 Constraint 11 269 0.8000 1.0000 2.0000 0.0000 Constraint 11 222 0.8000 1.0000 2.0000 0.0000 Constraint 11 86 0.8000 1.0000 2.0000 0.0000 Constraint 11 81 0.8000 1.0000 2.0000 0.0000 Constraint 11 73 0.8000 1.0000 2.0000 0.0000 Constraint 11 65 0.8000 1.0000 2.0000 0.0000 Constraint 11 58 0.8000 1.0000 2.0000 0.0000 Constraint 11 47 0.8000 1.0000 2.0000 0.0000 Constraint 11 39 0.8000 1.0000 2.0000 0.0000 Constraint 11 31 0.8000 1.0000 2.0000 0.0000 Constraint 11 22 0.8000 1.0000 2.0000 0.0000 Constraint 3 469 0.8000 1.0000 2.0000 0.0000 Constraint 3 401 0.8000 1.0000 2.0000 0.0000 Constraint 3 323 0.8000 1.0000 2.0000 0.0000 Constraint 3 269 0.8000 1.0000 2.0000 0.0000 Constraint 3 239 0.8000 1.0000 2.0000 0.0000 Constraint 3 131 0.8000 1.0000 2.0000 0.0000 Constraint 3 73 0.8000 1.0000 2.0000 0.0000 Constraint 3 65 0.8000 1.0000 2.0000 0.0000 Constraint 3 58 0.8000 1.0000 2.0000 0.0000 Constraint 3 47 0.8000 1.0000 2.0000 0.0000 Constraint 3 39 0.8000 1.0000 2.0000 0.0000 Constraint 3 31 0.8000 1.0000 2.0000 0.0000 Constraint 3 22 0.8000 1.0000 2.0000 0.0000 Constraint 3 11 0.8000 1.0000 2.0000 0.0000 Done printing distance constraints # command: