# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/ # command:# reading dunbrack-2191.atoms # #computed average backbone with maximum peptide_sq_deviance = 0.002 # computed average trans backbone unit from 53157 examples # computed average trans backbone unit before proline from 2010 examples # computed average cis backbone unit from 97 examples # trans (non-proline) backbone unit: # CA= -2.2087 1.0126 -0.0030 # O= -0.1499 2.2440 0.0016 # C= -0.6889 1.1368 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4581 -0.0000 0.0000 # cis backbone unit: # CA= -0.1436 2.4534 -0.0002 # O= -2.0284 0.9742 0.0015 # C= -0.8018 1.0771 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4668 0.0000 0.0000 # trans backbone unit before proline: # CA= -2.2100 1.0631 -0.0014 # O= -0.1236 2.2458 0.0075 # C= -0.6872 1.1517 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4660 0.0000 0.0000 # After reading dunbrack-2191.atoms have 2191 chains in training database # Count of chains,residues,atoms: 2191,500310,3902258 # 493341 residues have no bad marker # 3226 residues lack atoms needed to compute omega # 1453 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 4 # HAS_OXT 1167 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 3052 # HAS_UNKNOWN_ATOMS 9 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 979 # NON_PLANAR_PEPTIDE 888 # BAD_PEPTIDE 2680 # Note: may sum to more than number of residues, # because one residue may have multiple problems # command:# Reading rotamer library from dunbrack-2191.rot # command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/ # command:# ReadAtomType exp-pdb.types Read AtomType exp-pdb with 49 types. # command:# ReadClashTable exp-pdb-2191-2symm.clash # Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2 # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0340/ # command:# Making conformation for sequence T0340 numbered 1 through 90 Created new target T0340 from T0340.a2m # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0340/ # command:# reading script from file T0340.t04.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0340-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 1g9oA/T0340-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0340-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1g9oA)R9 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE # choosing archetypes in rotamer library T0340 88 :TR 1g9oA 97 :EQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=2 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_828388027.pdb -s /var/tmp/to_scwrl_828388027.seq -o /var/tmp/from_scwrl_828388027.pdb > /var/tmp/scwrl_828388027.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_828388027.pdb Number of alignments=1 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0340-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2fe5A expands to /projects/compbio/data/pdb/2fe5.pdb.gz 2fe5A:Skipped atom 9, because occupancy 0.3 <= existing 0.700 in 2fe5A Skipped atom 13, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 15, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 17, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 19, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 42, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 44, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 47, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 51, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 53, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 55, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 57, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 59, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 294, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 296, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 298, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 300, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 302, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 317, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 320, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 431, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 433, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 435, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 437, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 439, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 441, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 443, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 593, because occupancy 0.250 <= existing 0.750 in 2fe5A Skipped atom 597, because occupancy 0.250 <= existing 0.750 in 2fe5A Skipped atom 599, because occupancy 0.250 <= existing 0.750 in 2fe5A Skipped atom 618, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 620, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 622, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 624, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 626, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 628, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 630, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 632, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 634, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 636, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 638, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 640, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 642, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 644, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 646, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 648, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 650, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 652, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 654, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 656, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 658, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 660, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 662, because occupancy 0.500 <= existing 0.500 in 2fe5A # T0340 read from 2fe5A/T0340-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0340-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2fe5A to template set # found chain 2fe5A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fe5A)S221 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGI T0340 26 :SRPGQYIRSVDPGSPAARSG 2fe5A 251 :GDNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=5 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1144278049.pdb -s /var/tmp/to_scwrl_1144278049.seq -o /var/tmp/from_scwrl_1144278049.pdb > /var/tmp/scwrl_1144278049.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1144278049.pdb Number of alignments=2 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0340-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 1tp5A expands to /projects/compbio/data/pdb/1tp5.pdb.gz 1tp5A:# T0340 read from 1tp5A/T0340-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0340-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1tp5A to template set # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=8 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_332266748.pdb -s /var/tmp/to_scwrl_332266748.seq -o /var/tmp/from_scwrl_332266748.pdb > /var/tmp/scwrl_332266748.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_332266748.pdb Number of alignments=3 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/T0340-2fneA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2fneA expands to /projects/compbio/data/pdb/2fne.pdb.gz 2fneA:Skipped atom 15, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 19, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 21, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 23, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 25, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 27, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 658, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 662, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 664, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 666, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 668, because occupancy 0.500 <= existing 0.500 in 2fneA # T0340 read from 2fneA/T0340-2fneA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fneA read from 2fneA/T0340-2fneA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2fneA to template set # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGY T0340 26 :SRPGQYIRSVDPGSPAARSG 2fneA 1982 :GDLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 3 number of extra gaps= 0 total=11 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1192707555.pdb -s /var/tmp/to_scwrl_1192707555.seq -o /var/tmp/from_scwrl_1192707555.pdb > /var/tmp/scwrl_1192707555.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1192707555.pdb Number of alignments=4 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0340-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2fcfA expands to /projects/compbio/data/pdb/2fcf.pdb.gz 2fcfA:Skipped atom 598, because occupancy 0.500 <= existing 0.500 in 2fcfA Skipped atom 602, because occupancy 0.500 <= existing 0.500 in 2fcfA Skipped atom 604, because occupancy 0.500 <= existing 0.500 in 2fcfA Skipped atom 606, because occupancy 0.500 <= existing 0.500 in 2fcfA # T0340 read from 2fcfA/T0340-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0340-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2fcfA to template set # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 T0340 1 :SMLRPRLCHLRKG 2fcfA 1145 :QSMQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSII T0340 88 :TR 2fcfA 1245 :TR Number of specific fragments extracted= 5 number of extra gaps= 1 total=16 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_31308902.pdb -s /var/tmp/to_scwrl_31308902.seq -o /var/tmp/from_scwrl_31308902.pdb > /var/tmp/scwrl_31308902.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_31308902.pdb Number of alignments=5 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavA/T0340-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 1qavA expands to /projects/compbio/data/pdb/1qav.pdb.gz 1qavA:# T0340 read from 1qavA/T0340-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1qavA read from 1qavA/T0340-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1qavA to template set # found chain 1qavA in template set T0340 2 :MLRPRLCHLRKGPQ 1qavA 76 :SLQRRRVTVRKADA T0340 16 :GYGFNLHSDKSRP 1qavA 91 :GLGISIKGGRENK T0340 29 :GQYIRSVDPGSPAARSG 1qavA 105 :PILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 4 number of extra gaps= 0 total=20 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_816504794.pdb -s /var/tmp/to_scwrl_816504794.seq -o /var/tmp/from_scwrl_816504794.pdb > /var/tmp/scwrl_816504794.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_816504794.pdb Number of alignments=6 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/T0340-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2f5yA expands to /projects/compbio/data/pdb/2f5y.pdb.gz 2f5yA:Skipped atom 397, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 401, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 403, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 405, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 407, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 409, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 411, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 413, because occupancy 0.500 <= existing 0.500 in 2f5yA # T0340 read from 2f5yA/T0340-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f5yA read from 2f5yA/T0340-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2f5yA to template set # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0340)S87 because last residue in template chain is (2f5yA)V95 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=23 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_820697697.pdb -s /var/tmp/to_scwrl_820697697.seq -o /var/tmp/from_scwrl_820697697.pdb > /var/tmp/scwrl_820697697.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_820697697.pdb Number of alignments=7 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/T0340-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 1wf7A expands to /projects/compbio/data/pdb/1wf7.pdb.gz 1wf7A:# T0340 read from 1wf7A/T0340-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1wf7A read from 1wf7A/T0340-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1wf7A to template set # found chain 1wf7A in template set T0340 1 :SMLRPRLCHLR 1wf7A 2 :SSGSSGSVSLV T0340 13 :GPQGYGFNLHSDKSRP 1wf7A 13 :GPAPWGFRLQGGKDFN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1wf7A 30 :PLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 3 number of extra gaps= 0 total=26 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_655858699.pdb -s /var/tmp/to_scwrl_655858699.seq -o /var/tmp/from_scwrl_655858699.pdb > /var/tmp/scwrl_655858699.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_655858699.pdb Number of alignments=8 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0340-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2f0aA expands to /projects/compbio/data/pdb/2f0a.pdb.gz 2f0aA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0340 read from 2f0aA/T0340-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0340-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2f0aA to template set # found chain 2f0aA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 5 :PRLCHLR 2f0aA 252 :IITVTLN T0340 16 :GYGFNLHS 2f0aA 264 :FLGISIVG T0340 24 :DKSRPGQYIRSVDPGSPAARSG 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=31 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1583571042.pdb -s /var/tmp/to_scwrl_1583571042.seq -o /var/tmp/from_scwrl_1583571042.pdb > /var/tmp/scwrl_1583571042.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1583571042.pdb Number of alignments=9 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1i16/T0340-1i16-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 1i16 expands to /projects/compbio/data/pdb/1i16.pdb.gz 1i16:Warning: there is no chain 1i16 will retry with 1i16A # T0340 read from 1i16/T0340-1i16-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1i16 read from 1i16/T0340-1i16-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1i16 to template set # found chain 1i16 in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGK T0340 26 :SRPGQYIRSVDPGSPAARSG 1i16 55 :GDKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0340 76 :EDEARLLVVGPSTRL 1i16 107 :DGPVTIVIRRKSLQS Number of specific fragments extracted= 4 number of extra gaps= 0 total=35 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_559301039.pdb -s /var/tmp/to_scwrl_559301039.seq -o /var/tmp/from_scwrl_559301039.pdb > /var/tmp/scwrl_559301039.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_559301039.pdb Number of alignments=10 # command:# reading script from file T0340.t06.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0340-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 1g9oA/T0340-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0340-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1g9oA)R9 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP T0340 87 :STRL 1g9oA 96 :DEQL Number of specific fragments extracted= 2 number of extra gaps= 0 total=37 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1395132001.pdb -s /var/tmp/to_scwrl_1395132001.seq -o /var/tmp/from_scwrl_1395132001.pdb > /var/tmp/scwrl_1395132001.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1395132001.pdb Number of alignments=11 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0340-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 2fe5A/T0340-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0340-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fe5A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fe5A)S221 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=40 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1186090427.pdb -s /var/tmp/to_scwrl_1186090427.seq -o /var/tmp/from_scwrl_1186090427.pdb > /var/tmp/scwrl_1186090427.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1186090427.pdb Number of alignments=12 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0340-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 1tp5A/T0340-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0340-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=43 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1974806402.pdb -s /var/tmp/to_scwrl_1974806402.seq -o /var/tmp/from_scwrl_1974806402.pdb > /var/tmp/scwrl_1974806402.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1974806402.pdb Number of alignments=13 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/T0340-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 2fneA/T0340-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fneA read from 2fneA/T0340-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 3 number of extra gaps= 0 total=46 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1473144499.pdb -s /var/tmp/to_scwrl_1473144499.seq -o /var/tmp/from_scwrl_1473144499.pdb > /var/tmp/scwrl_1473144499.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1473144499.pdb Number of alignments=14 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0340-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 2fcfA/T0340-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0340-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 1 :SMLRPRLCHLRKG 2fcfA 1145 :QSMQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI T0340 87 :STRL 2fcfA 1244 :STRL Number of specific fragments extracted= 5 number of extra gaps= 1 total=51 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1739000680.pdb -s /var/tmp/to_scwrl_1739000680.seq -o /var/tmp/from_scwrl_1739000680.pdb > /var/tmp/scwrl_1739000680.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1739000680.pdb Number of alignments=15 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavA/T0340-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 1qavA/T0340-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1qavA read from 1qavA/T0340-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1qavA in template set T0340 1 :SMLRPRLCHLRKGPQ 1qavA 75 :GSLQRRRVTVRKADA T0340 16 :GYGFNLHSDKS 1qavA 91 :GLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 4 number of extra gaps= 0 total=55 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1498617646.pdb -s /var/tmp/to_scwrl_1498617646.seq -o /var/tmp/from_scwrl_1498617646.pdb > /var/tmp/scwrl_1498617646.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1498617646.pdb Number of alignments=16 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/T0340-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 2f5yA/T0340-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f5yA read from 2f5yA/T0340-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=58 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_669908538.pdb -s /var/tmp/to_scwrl_669908538.seq -o /var/tmp/from_scwrl_669908538.pdb > /var/tmp/scwrl_669908538.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_669908538.pdb Number of alignments=17 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/T0340-1wf7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 1wf7A/T0340-1wf7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1wf7A read from 1wf7A/T0340-1wf7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1wf7A in template set T0340 1 :SMLRPRLCHLR 1wf7A 2 :SSGSSGSVSLV T0340 13 :GPQGYGFNLHSDKS 1wf7A 13 :GPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRA T0340 87 :STR 1wf7A 94 :EPV Number of specific fragments extracted= 4 number of extra gaps= 0 total=62 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1387036158.pdb -s /var/tmp/to_scwrl_1387036158.seq -o /var/tmp/from_scwrl_1387036158.pdb > /var/tmp/scwrl_1387036158.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1387036158.pdb Number of alignments=18 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0340-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 2f0aA/T0340-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0340-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 5 :PRLCHLR 2f0aA 252 :IITVTLN T0340 16 :GYGFNLHS 2f0aA 264 :FLGISIVG T0340 24 :DKSRPGQYIRSVDPGSPAARSG 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=67 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_12895151.pdb -s /var/tmp/to_scwrl_12895151.seq -o /var/tmp/from_scwrl_12895151.pdb > /var/tmp/scwrl_12895151.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_12895151.pdb Number of alignments=19 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1fc6A/T0340-1fc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 1fc6A/T0340-1fc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1fc6A read from 1fc6A/T0340-1fc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1fc6A in training set T0340 13 :GPQ 1fc6A 157 :AGS T0340 16 :GYGFNLHSDKS 1fc6A 162 :GVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASI 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLL T0340 73 :KAREDEARLLVVGP 1fc6A 221 :GEADSQVEVVLHAP Number of specific fragments extracted= 4 number of extra gaps= 0 total=71 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1144522534.pdb -s /var/tmp/to_scwrl_1144522534.seq -o /var/tmp/from_scwrl_1144522534.pdb > /var/tmp/scwrl_1144522534.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1144522534.pdb Number of alignments=20 # command:# reading script from file T0340.t2k.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0340-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 1g9oA/T0340-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0340-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDE Number of specific fragments extracted= 1 number of extra gaps= 0 total=72 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1812282133.pdb -s /var/tmp/to_scwrl_1812282133.seq -o /var/tmp/from_scwrl_1812282133.pdb > /var/tmp/scwrl_1812282133.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1812282133.pdb Number of alignments=21 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0340-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 1tp5A/T0340-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0340-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVG 1tp5A 390 :AQY Number of specific fragments extracted= 3 number of extra gaps= 1 total=75 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1328104338.pdb -s /var/tmp/to_scwrl_1328104338.seq -o /var/tmp/from_scwrl_1328104338.pdb > /var/tmp/scwrl_1328104338.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1328104338.pdb Number of alignments=22 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0340-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 2fe5A/T0340-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0340-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fe5A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=78 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1380171691.pdb -s /var/tmp/to_scwrl_1380171691.seq -o /var/tmp/from_scwrl_1380171691.pdb > /var/tmp/scwrl_1380171691.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1380171691.pdb Number of alignments=23 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/T0340-2fneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 2fneA/T0340-2fneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fneA read from 2fneA/T0340-2fneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 3 number of extra gaps= 0 total=81 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1113502214.pdb -s /var/tmp/to_scwrl_1113502214.seq -o /var/tmp/from_scwrl_1113502214.pdb > /var/tmp/scwrl_1113502214.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1113502214.pdb Number of alignments=24 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0340-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 2fcfA/T0340-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0340-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 3 :LRPRLCHLRKG 2fcfA 1147 :MQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI Number of specific fragments extracted= 4 number of extra gaps= 1 total=85 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_860516127.pdb -s /var/tmp/to_scwrl_860516127.seq -o /var/tmp/from_scwrl_860516127.pdb > /var/tmp/scwrl_860516127.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_860516127.pdb Number of alignments=25 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/T0340-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 1wf7A/T0340-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1wf7A read from 1wf7A/T0340-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1wf7A in template set T0340 8 :CHLRKGPQGYGFNLHSDKS 1wf7A 8 :SVSLVGPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASA Number of specific fragments extracted= 2 number of extra gaps= 0 total=87 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_777720504.pdb -s /var/tmp/to_scwrl_777720504.seq -o /var/tmp/from_scwrl_777720504.pdb > /var/tmp/scwrl_777720504.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_777720504.pdb Number of alignments=26 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/T0340-2f5yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 2f5yA/T0340-2f5yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f5yA read from 2f5yA/T0340-2f5yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=90 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1543755628.pdb -s /var/tmp/to_scwrl_1543755628.seq -o /var/tmp/from_scwrl_1543755628.pdb > /var/tmp/scwrl_1543755628.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1543755628.pdb Number of alignments=27 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n99A/T0340-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 1n99A expands to /projects/compbio/data/pdb/1n99.pdb.gz 1n99A:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0340 read from 1n99A/T0340-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1n99A read from 1n99A/T0340-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1n99A to template set # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQG 1n99A 113 :REVILCKDQDG T0340 19 :FNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 1n99A 125 :IGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM T0340 85 :GP 1n99A 191 :RD Number of specific fragments extracted= 3 number of extra gaps= 1 total=93 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1722060048.pdb -s /var/tmp/to_scwrl_1722060048.seq -o /var/tmp/from_scwrl_1722060048.pdb > /var/tmp/scwrl_1722060048.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1722060048.pdb Number of alignments=28 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0340-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 2f0aA/T0340-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0340-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 16 :GYGFNLHS 2f0aA 264 :FLGISIVG T0340 24 :DKSRPGQYIRSVDPGSPAARSG 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKA 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRD T0340 75 :REDEARLLVVGP 2f0aA 330 :KPGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=97 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1455590963.pdb -s /var/tmp/to_scwrl_1455590963.seq -o /var/tmp/from_scwrl_1455590963.pdb > /var/tmp/scwrl_1455590963.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1455590963.pdb Number of alignments=29 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1fc6A/T0340-1fc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0340 read from 1fc6A/T0340-1fc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1fc6A read from 1fc6A/T0340-1fc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1fc6A in training set T0340 13 :GPQGYGFNLHSDKS 1fc6A 159 :SVTGVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKA 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQG T0340 75 :REDEARLLVVGPS 1fc6A 223 :ADSQVEVVLHAPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=100 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_328298285.pdb -s /var/tmp/to_scwrl_328298285.seq -o /var/tmp/from_scwrl_328298285.pdb > /var/tmp/scwrl_328298285.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_328298285.pdb Number of alignments=30 # command:# reading script from file T0340.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0340-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1g9oA/T0340-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0340-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1g9oA)R9 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE T0340 88 :TR 1g9oA 97 :EQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=102 # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_70636429.pdb -s /var/tmp/to_scwrl_70636429.seq -o /var/tmp/from_scwrl_70636429.pdb > /var/tmp/scwrl_70636429.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_70636429.pdb Number of alignments=31 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0340-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1tp5A/T0340-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0340-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=105 # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_136495343.pdb -s /var/tmp/to_scwrl_136495343.seq -o /var/tmp/from_scwrl_136495343.pdb > /var/tmp/scwrl_136495343.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_136495343.pdb Number of alignments=32 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0340-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 2fe5A/T0340-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0340-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fe5A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fe5A)S221 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGI T0340 26 :SRPGQYIRSVDPGSPAARSG 2fe5A 251 :GDNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=108 # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1472576334.pdb -s /var/tmp/to_scwrl_1472576334.seq -o /var/tmp/from_scwrl_1472576334.pdb > /var/tmp/scwrl_1472576334.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1472576334.pdb Number of alignments=33 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/T0340-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 2fneA/T0340-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fneA read from 2fneA/T0340-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 3 number of extra gaps= 0 total=111 # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_402903177.pdb -s /var/tmp/to_scwrl_402903177.seq -o /var/tmp/from_scwrl_402903177.pdb > /var/tmp/scwrl_402903177.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_402903177.pdb Number of alignments=34 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0340-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 2fcfA/T0340-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0340-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 1 :SMLRPRLCHLRKG 2fcfA 1145 :QSMQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI T0340 87 :STRL 2fcfA 1244 :STRL Number of specific fragments extracted= 5 number of extra gaps= 1 total=116 # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1329202899.pdb -s /var/tmp/to_scwrl_1329202899.seq -o /var/tmp/from_scwrl_1329202899.pdb > /var/tmp/scwrl_1329202899.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1329202899.pdb Number of alignments=35 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavA/T0340-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1qavA/T0340-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1qavA read from 1qavA/T0340-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1qavA in template set T0340 1 :SMLRPRLCHLRKGPQ 1qavA 75 :GSLQRRRVTVRKADA T0340 16 :GYGFNLHSDKS 1qavA 91 :GLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 4 number of extra gaps= 0 total=120 # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1503885237.pdb -s /var/tmp/to_scwrl_1503885237.seq -o /var/tmp/from_scwrl_1503885237.pdb > /var/tmp/scwrl_1503885237.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1503885237.pdb Number of alignments=36 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/T0340-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 2f5yA/T0340-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f5yA read from 2f5yA/T0340-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=123 # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_1219407970.pdb -s /var/tmp/to_scwrl_1219407970.seq -o /var/tmp/from_scwrl_1219407970.pdb > /var/tmp/scwrl_1219407970.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1219407970.pdb Number of alignments=37 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/T0340-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1wf7A/T0340-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1wf7A read from 1wf7A/T0340-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1wf7A in template set T0340 1 :SMLRPRLCHLR 1wf7A 2 :SSGSSGSVSLV T0340 13 :GPQGYGFNLHSDKSRP 1wf7A 13 :GPAPWGFRLQGGKDFN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1wf7A 30 :PLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 3 number of extra gaps= 0 total=126 # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_2416949.pdb -s /var/tmp/to_scwrl_2416949.seq -o /var/tmp/from_scwrl_2416949.pdb > /var/tmp/scwrl_2416949.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2416949.pdb Number of alignments=38 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0340-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 2f0aA/T0340-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0340-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f0aA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 5 :PRLCHLR 2f0aA 252 :IITVTLN T0340 16 :GYGFNLHS 2f0aA 264 :FLGISIVG T0340 24 :DKSRPGQYIRSVDPGSPAARSG 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=131 # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_12260289.pdb -s /var/tmp/to_scwrl_12260289.seq -o /var/tmp/from_scwrl_12260289.pdb > /var/tmp/scwrl_12260289.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_12260289.pdb Number of alignments=39 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1fc6A/T0340-1fc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1fc6A/T0340-1fc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1fc6A read from 1fc6A/T0340-1fc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1fc6A in training set T0340 13 :GPQ 1fc6A 157 :AGS T0340 16 :GYGFNLHSDKS 1fc6A 162 :GVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASI 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLL T0340 73 :KAREDEARLLVVGP 1fc6A 221 :GEADSQVEVVLHAP Number of specific fragments extracted= 4 number of extra gaps= 0 total=135 # request to SCWRL produces command: ulimit -t 81 ; scwrl3 -i /var/tmp/to_scwrl_655495367.pdb -s /var/tmp/to_scwrl_655495367.seq -o /var/tmp/from_scwrl_655495367.pdb > /var/tmp/scwrl_655495367.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_655495367.pdb Number of alignments=40 # command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0340//projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0340/manyalignments-local.under or /projects/compbio/experiments/protein-predict/casp7/T0340//projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0340/manyalignments-local.under.gz for input Trying /projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0340/manyalignments-local.under # reading script from file /projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0340/manyalignments-local.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ky9B/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ky9B expands to /projects/compbio/data/pdb/1ky9.pdb.gz 1ky9B:# T0340 read from 1ky9B/merged-local-a2m # 1ky9B read from 1ky9B/merged-local-a2m # adding 1ky9B to template set # found chain 1ky9B in template set Warning: unaligning (T0340)R6 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G79 Warning: unaligning (T0340)K12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)A86 Warning: unaligning (T0340)P14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)A86 Warning: unaligning (T0340)I72 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0340)A74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0340 2 :MLRP 1ky9B 47 :QQFF T0340 8 :CHLR 1ky9B 80 :QQQK T0340 15 :QGYGFNLHSD 1ky9B 87 :LGSGVIIDAD T0340 25 :KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVAS 1ky9B 283 :DAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVG T0340 75 :REDEARLLVV 1ky9B 333 :VGSKLTLGLL Number of specific fragments extracted= 5 number of extra gaps= 0 total=140 Number of alignments=41 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0340)R6 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G79 Warning: unaligning (T0340)K12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)A86 Warning: unaligning (T0340)P14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)A86 Warning: unaligning (T0340)I72 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0340)A74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0340 4 :RP 1ky9B 49 :FF T0340 8 :CHLR 1ky9B 80 :QQQK T0340 15 :QGYGFNLHSD 1ky9B 87 :LGSGVIIDAD T0340 25 :KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVAS 1ky9B 283 :DAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVG T0340 75 :REDEARLLVVGP 1ky9B 333 :VGSKLTLGLLRD Number of specific fragments extracted= 5 number of extra gaps= 0 total=145 Number of alignments=42 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0340)I72 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0340)A74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVAS 1ky9B 287 :GAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVG T0340 75 :REDEARLLVVGPS 1ky9B 333 :VGSKLTLGLLRDG Number of specific fragments extracted= 2 number of extra gaps= 0 total=147 Number of alignments=43 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0340)I72 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0340)A74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0340 26 :SRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVAS 1ky9B 284 :AQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVG T0340 75 :REDEARLLVVGPS 1ky9B 333 :VGSKLTLGLLRDG Number of specific fragments extracted= 2 number of extra gaps= 0 total=149 Number of alignments=44 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0340)F19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G269 Warning: unaligning (T0340)L21 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)G269 Warning: unaligning (T0340)A74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 T0340 18 :G 1ky9B 266 :G T0340 22 :HSDK 1ky9B 270 :TELN T0340 26 :SRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1ky9B 284 :AQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISS T0340 65 :HAEVVASIK 1ky9B 321 :FAALRAQVG T0340 76 :EDEARLLVVGPS 1ky9B 334 :GSKLTLGLLRDG Number of specific fragments extracted= 5 number of extra gaps= 0 total=154 Number of alignments=45 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0340)L21 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G269 Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)G269 Warning: unaligning (T0340)A74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 T0340 24 :DK 1ky9B 270 :TE T0340 26 :SRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1ky9B 284 :AQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISS T0340 65 :HAEVVASIK 1ky9B 321 :FAALRAQVG T0340 76 :EDEARLLVVGPS 1ky9B 334 :GSKLTLGLLRDG Number of specific fragments extracted= 4 number of extra gaps= 0 total=158 Number of alignments=46 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0340)H22 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)S377 T0340 23 :SDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1ky9B 378 :NKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKN T0340 65 :HAEVVASIKAREDEARLLVVGP 1ky9B 418 :IAELRKVLDSKPSVLALNIQRG Number of specific fragments extracted= 2 number of extra gaps= 0 total=160 Number of alignments=47 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0340)H22 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)S377 T0340 23 :SDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1ky9B 378 :NKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKN T0340 65 :HAEVVASIKAREDEARLLVVGP 1ky9B 418 :IAELRKVLDSKPSVLALNIQRG Number of specific fragments extracted= 2 number of extra gaps= 0 total=162 Number of alignments=48 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0340)A74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVE 1ky9B 285 :QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPIS T0340 64 :RHAEVVASIK 1ky9B 320 :SFAALRAQVG T0340 76 :EDEARLLVVGPST 1ky9B 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 3 number of extra gaps= 0 total=165 Number of alignments=49 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0340)L21 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G269 Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)G269 Warning: unaligning (T0340)A74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 T0340 24 :DKS 1ky9B 270 :TEL T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1ky9B 285 :QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISS T0340 65 :HAEVVASIK 1ky9B 321 :FAALRAQVG T0340 76 :EDEARLLVVGPST 1ky9B 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 4 number of extra gaps= 0 total=169 Number of alignments=50 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0340)I72 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0340)A74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVAS 1ky9B 287 :GAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVG T0340 75 :REDEARLLVV 1ky9B 333 :VGSKLTLGLL Number of specific fragments extracted= 2 number of extra gaps= 0 total=171 Number of alignments=51 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=171 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set T0340 25 :KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1ky9B 283 :DAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISS T0340 65 :HAEVVASI 1ky9B 321 :FAALRAQV Number of specific fragments extracted= 2 number of extra gaps= 0 total=173 Number of alignments=52 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set T0340 25 :KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1ky9B 283 :DAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISS T0340 65 :HAEVVASIK 1ky9B 321 :FAALRAQVG Number of specific fragments extracted= 2 number of extra gaps= 0 total=175 Number of alignments=53 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1um7A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1um7A expands to /projects/compbio/data/pdb/1um7.pdb.gz 1um7A:# T0340 read from 1um7A/merged-local-a2m # 1um7A read from 1um7A/merged-local-a2m # adding 1um7A to template set # found chain 1um7A in template set T0340 1 :SMLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1um7A 12 :DAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1um7A 58 :LRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRP Number of specific fragments extracted= 2 number of extra gaps= 0 total=177 Number of alignments=54 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1um7A 13 :AREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1um7A 58 :LRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRP Number of specific fragments extracted= 2 number of extra gaps= 0 total=179 Number of alignments=55 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0340 1 :SMLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1um7A 12 :DAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1um7A 58 :LRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=181 Number of alignments=56 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1um7A 13 :AREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1um7A 58 :LRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=183 Number of alignments=57 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1um7A 13 :AREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1um7A 58 :LRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=185 Number of alignments=58 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1um7A 14 :REPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1um7A 58 :LRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=187 Number of alignments=59 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1bfeA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1bfeA expands to /projects/compbio/data/pdb/1bfe.pdb.gz 1bfeA:# T0340 read from 1bfeA/merged-local-a2m # 1bfeA read from 1bfeA/merged-local-a2m # adding 1bfeA to template set # found chain 1bfeA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=189 Number of alignments=60 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=191 Number of alignments=61 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARS 1bfeA 310 :EPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLS T0340 45 :GLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1bfeA 352 :ELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=193 Number of alignments=62 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=195 Number of alignments=63 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=197 Number of alignments=64 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=199 Number of alignments=65 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=201 Number of alignments=66 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=203 Number of alignments=67 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=205 Number of alignments=68 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=207 Number of alignments=69 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=209 Number of alignments=70 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=211 Number of alignments=71 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=213 Number of alignments=72 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=215 Number of alignments=73 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1bfeA 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1bfeA 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=217 Number of alignments=74 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1m5zA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1m5zA expands to /projects/compbio/data/pdb/1m5z.pdb.gz 1m5zA:# T0340 read from 1m5zA/merged-local-a2m # 1m5zA read from 1m5zA/merged-local-a2m # adding 1m5zA to template set # found chain 1m5zA in template set T0340 3 :LRPRLCHLRKGPQ 1m5zA 20 :VELHKVTLYKDSG T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 35 :DFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=219 Number of alignments=75 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0340 3 :LRPRLCHLRKGPQ 1m5zA 20 :VELHKVTLYKDSG T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 35 :DFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=221 Number of alignments=76 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0340)S87 because last residue in template chain is (1m5zA)P106 T0340 2 :MLRPRLCHLRKGPQ 1m5zA 19 :PVELHKVTLYKDSG T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 35 :DFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=223 Number of alignments=77 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0340 2 :MLRPRLCHLRKGPQ 1m5zA 19 :PVELHKVTLYKDSG T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 35 :DFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=225 Number of alignments=78 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0340)S87 because last residue in template chain is (1m5zA)P106 T0340 1 :SMLRPRLCHLRKGPQ 1m5zA 18 :TPVELHKVTLYKDSG T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 35 :DFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=227 Number of alignments=79 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0340)S87 because last residue in template chain is (1m5zA)P106 T0340 1 :SMLRPRLCHLRKGPQ 1m5zA 18 :TPVELHKVTLYKDSG T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 35 :DFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=229 Number of alignments=80 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0340 1 :SMLRPRLCHLRKGPQ 1m5zA 18 :TPVELHKVTLYKDSG T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 35 :DFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=231 Number of alignments=81 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0340 2 :MLRPRLCHLRKGPQ 1m5zA 19 :PVELHKVTLYKDSG T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 35 :DFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=233 Number of alignments=82 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0340)S87 because last residue in template chain is (1m5zA)P106 T0340 1 :SMLRPRLCHLRKGPQ 1m5zA 18 :TPVELHKVTLYKDSG T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 35 :DFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=235 Number of alignments=83 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0340 1 :SMLRPRLCHLRKGPQ 1m5zA 18 :TPVELHKVTLYKDSG T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 35 :DFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=237 Number of alignments=84 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0340 7 :LCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1m5zA 26 :TLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVIS Number of specific fragments extracted= 1 number of extra gaps= 0 total=238 Number of alignments=85 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0340 8 :CHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 27 :LYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 1 number of extra gaps= 0 total=239 Number of alignments=86 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0340)S87 because last residue in template chain is (1m5zA)P106 T0340 2 :MLRPRLCHLRKGP 1m5zA 19 :PVELHKVTLYKDS T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 34 :EDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=241 Number of alignments=87 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0340 2 :MLRPRLCHLRKGP 1m5zA 19 :PVELHKVTLYKDS T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1m5zA 34 :EDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 2 number of extra gaps= 0 total=243 Number of alignments=88 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1gq4A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1gq4A expands to /projects/compbio/data/pdb/1gq4.pdb.gz 1gq4A:# T0340 read from 1gq4A/merged-local-a2m # 1gq4A read from 1gq4A/merged-local-a2m # adding 1gq4A to template set # found chain 1gq4A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1gq4A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=244 Number of alignments=89 # 1gq4A read from 1gq4A/merged-local-a2m # found chain 1gq4A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1gq4A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=245 Number of alignments=90 # 1gq4A read from 1gq4A/merged-local-a2m # found chain 1gq4A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1gq4A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=246 Number of alignments=91 # 1gq4A read from 1gq4A/merged-local-a2m # found chain 1gq4A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1gq4A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=247 Number of alignments=92 # 1gq4A read from 1gq4A/merged-local-a2m # found chain 1gq4A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1gq4A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVV Number of specific fragments extracted= 1 number of extra gaps= 0 total=248 Number of alignments=93 # 1gq4A read from 1gq4A/merged-local-a2m # found chain 1gq4A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1gq4A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=249 Number of alignments=94 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1qavA/merged-local-a2m # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 5 :PRLCHLRKG 1qavA 79 :RRRVTVRKA T0340 14 :PQGYGFNLHSD 1qavA 89 :AGGLGISIKGG T0340 25 :KSRPGQYIRSVDPGSPAARS 1qavA 101 :ENKMPILISKIFKGLAADQT T0340 45 :GLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1qavA 122 :ALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 4 number of extra gaps= 0 total=253 Number of alignments=95 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 1 :SMLRPRLCHLRKGP 1qavA 75 :GSLQRRRVTVRKAD T0340 15 :QGYGFNLHSDKSRP 1qavA 90 :GGLGISIKGGRENK T0340 29 :GQYIRSVDPGSPAARSG 1qavA 105 :PILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVK Number of specific fragments extracted= 4 number of extra gaps= 0 total=257 Number of alignments=96 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 4 :RPRLCHLRKGP 1qavA 78 :QRRRVTVRKAD T0340 15 :QGYGFNLHSDKS 1qavA 90 :GGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVK Number of specific fragments extracted= 4 number of extra gaps= 0 total=261 Number of alignments=97 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set Warning: unaligning (T0340)S87 because last residue in template chain is (1qavA)K164 T0340 3 :LRPRLCHLRK 1qavA 77 :LQRRRVTVRK T0340 13 :GPQGYGFNLHSDKS 1qavA 88 :DAGGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 4 number of extra gaps= 0 total=265 Number of alignments=98 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 4 :RPRLCHLRK 1qavA 78 :QRRRVTVRK T0340 13 :GPQGYGFNLHSDKS 1qavA 88 :DAGGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 4 number of extra gaps= 0 total=269 Number of alignments=99 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 2 :MLRPRLCHLRKGP 1qavA 76 :SLQRRRVTVRKAD T0340 15 :QGYGFNLHSDKS 1qavA 90 :GGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEV Number of specific fragments extracted= 4 number of extra gaps= 0 total=273 Number of alignments=100 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 4 :RPRLCHLRKGP 1qavA 78 :QRRRVTVRKAD T0340 15 :QGYGFNLHSDKS 1qavA 90 :GGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVK Number of specific fragments extracted= 4 number of extra gaps= 0 total=277 Number of alignments=101 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set Warning: unaligning (T0340)S87 because last residue in template chain is (1qavA)K164 T0340 1 :SMLRPRLCHLRK 1qavA 75 :GSLQRRRVTVRK T0340 13 :GPQGYGFNLHSDKSRP 1qavA 88 :DAGGLGISIKGGRENK T0340 29 :GQYIRSVDPGSPAARSG 1qavA 105 :PILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 4 number of extra gaps= 0 total=281 Number of alignments=102 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 3 :LRPRLCHLRKGP 1qavA 77 :LQRRRVTVRKAD T0340 15 :QGYGFNLHSDKSRP 1qavA 90 :GGLGISIKGGRENK T0340 29 :GQYIRSVDPGSPAARSG 1qavA 105 :PILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 4 number of extra gaps= 0 total=285 Number of alignments=103 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set Warning: unaligning (T0340)S87 because last residue in template chain is (1qavA)K164 T0340 1 :SMLRPRLCHLRKGP 1qavA 75 :GSLQRRRVTVRKAD T0340 15 :QGYGFNLHSDKSRP 1qavA 90 :GGLGISIKGGRENK T0340 29 :GQYIRSVDPGSPAARSG 1qavA 105 :PILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 4 number of extra gaps= 0 total=289 Number of alignments=104 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 2 :MLRPRLCHLRKGPQ 1qavA 76 :SLQRRRVTVRKADA T0340 16 :GYGFNLHSDKSRP 1qavA 91 :GLGISIKGGRENK T0340 29 :GQYIRSVDPGSPAARSG 1qavA 105 :PILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 4 number of extra gaps= 0 total=293 Number of alignments=105 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 1 :SMLRPRLCHLRKGP 1qavA 75 :GSLQRRRVTVRKAD T0340 15 :QGYGFNLHSDKS 1qavA 90 :GGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEV Number of specific fragments extracted= 4 number of extra gaps= 0 total=297 Number of alignments=106 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 4 :RPRLCHLRKGP 1qavA 78 :QRRRVTVRKAD T0340 15 :QGYGFNLHSDKS 1qavA 90 :GGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVK Number of specific fragments extracted= 4 number of extra gaps= 0 total=301 Number of alignments=107 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 1 :SMLRPRLCHLRKGP 1qavA 75 :GSLQRRRVTVRKAD T0340 15 :QGYGFNLHSDKS 1qavA 90 :GGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 4 number of extra gaps= 0 total=305 Number of alignments=108 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 1 :SMLRPRLCHLRKGPQ 1qavA 75 :GSLQRRRVTVRKADA T0340 16 :GYGFNLHSDKS 1qavA 91 :GLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 4 number of extra gaps= 0 total=309 Number of alignments=109 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1qavA 79 :RRRVTVRKADAGGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEV Number of specific fragments extracted= 3 number of extra gaps= 0 total=312 Number of alignments=110 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 6 :RLCHLRKGPQGYGFNLHSDKS 1qavA 81 :RVTVRKADAGGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEV Number of specific fragments extracted= 3 number of extra gaps= 0 total=315 Number of alignments=111 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 1 :SMLRPRLCHLRK 1qavA 75 :GSLQRRRVTVRK T0340 13 :GPQGYGFNLHSDKS 1qavA 88 :DAGGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 4 number of extra gaps= 0 total=319 Number of alignments=112 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0340 3 :LRPRLCHLRK 1qavA 77 :LQRRRVTVRK T0340 13 :GPQGYGFNLHSDKS 1qavA 88 :DAGGLGISIKGGRE T0340 27 :RPGQYIRSVDPGSPAARSG 1qavA 103 :KMPILISKIFKGLAADQTE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1qavA 123 :LFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 4 number of extra gaps= 0 total=323 Number of alignments=113 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavB/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1qavB expands to /projects/compbio/data/pdb/1qav.pdb.gz 1qavB:# T0340 read from 1qavB/merged-local-a2m # 1qavB read from 1qavB/merged-local-a2m # adding 1qavB to template set # found chain 1qavB in template set T0340 5 :PRLCHLRKG 1qavB 1015 :VISVRLFKR T0340 14 :PQGYGFNLHSDKSRPGQYIRSVDPGSPAARS 1qavB 1025 :VGGLGFLVKERVSKPPVIISDLIRGGAAEQS T0340 45 :GLRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1qavB 1057 :LIQAGDIILAVNDRPLVDLSYDSALEVLRGIA T0340 77 :DEARLLVVGP 1qavB 1091 :THVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=327 Number of alignments=114 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0340 3 :LRPRLCHLRKGPQ 1qavB 1013 :PNVISVRLFKRKV T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1027 :GLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPSTRL 1qavB 1089 :SETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=331 Number of alignments=115 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0340 4 :RPRLCHLRKGPQ 1qavB 1014 :NVISVRLFKRKV T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1027 :GLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1qavB 1089 :SETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=335 Number of alignments=116 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0340 3 :LRPRLCHLRKGP 1qavB 1013 :PNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1026 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1qavB 1090 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=339 Number of alignments=117 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0340 3 :LRPRLCHLRKGP 1qavB 1013 :PNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1026 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGP 1qavB 1090 :ETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=343 Number of alignments=118 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1qavB)Q1012 T0340 3 :LRPRLCHLRKGP 1qavB 1013 :PNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1026 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1qavB 1090 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=347 Number of alignments=119 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1qavB)Q1012 T0340 3 :LRPRLCHLRKGPQ 1qavB 1013 :PNVISVRLFKRKV T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1027 :GLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1qavB 1090 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=351 Number of alignments=120 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0340 3 :LRPRLCHLRKGP 1qavB 1013 :PNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1026 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGP 1qavB 1090 :ETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=355 Number of alignments=121 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0340 3 :LRPRLCHLRKGP 1qavB 1013 :PNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1026 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1qavB 1090 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=359 Number of alignments=122 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1qavB)Q1012 T0340 3 :LRPRLCHLRKGP 1qavB 1013 :PNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1026 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGP 1qavB 1090 :ETHVVLILRGP T0340 88 :TR 1qavB 1102 :GF Number of specific fragments extracted= 5 number of extra gaps= 0 total=364 Number of alignments=123 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1qavB)Q1012 T0340 3 :LRPRLCHLRKGP 1qavB 1013 :PNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1026 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPSTR 1qavB 1090 :ETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=368 Number of alignments=124 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1020 :LFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLI Number of specific fragments extracted= 2 number of extra gaps= 0 total=370 Number of alignments=125 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0340 8 :CHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1019 :RLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILR Number of specific fragments extracted= 2 number of extra gaps= 0 total=372 Number of alignments=126 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0340 3 :LRPRLCHL 1qavB 1013 :PNVISVRL T0340 11 :RKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1022 :KRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=375 Number of alignments=127 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0340 3 :LRPRLCHLR 1qavB 1013 :PNVISVRLF T0340 12 :KGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qavB 1023 :RKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARED 1qavB 1058 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIAS T0340 78 :EARLLVVGPST 1qavB 1092 :HVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=379 Number of alignments=128 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1pdr/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1pdr expands to /projects/compbio/data/pdb/1pdr.pdb.gz 1pdr:Warning: there is no chain 1pdr will retry with 1pdrA # T0340 read from 1pdr/merged-local-a2m # 1pdr read from 1pdr/merged-local-a2m # adding 1pdr to template set # found chain 1pdr in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARS 1pdr 463 :EPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLS T0340 45 :GLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1pdr 505 :ELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRP Number of specific fragments extracted= 2 number of extra gaps= 0 total=381 Number of alignments=129 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 462 :REPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=383 Number of alignments=130 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 462 :REPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=385 Number of alignments=131 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 463 :EPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRP Number of specific fragments extracted= 2 number of extra gaps= 0 total=387 Number of alignments=132 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 462 :REPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRP Number of specific fragments extracted= 2 number of extra gaps= 0 total=389 Number of alignments=133 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 461 :TREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=391 Number of alignments=134 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 1 :SMLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 460 :ITREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=393 Number of alignments=135 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 462 :REPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=395 Number of alignments=136 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 462 :REPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=397 Number of alignments=137 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 461 :TREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=399 Number of alignments=138 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 461 :TREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=401 Number of alignments=139 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 463 :EPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=403 Number of alignments=140 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 463 :EPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=405 Number of alignments=141 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 1 :SMLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 460 :ITREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=407 Number of alignments=142 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1pdr 462 :REPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1pdr 506 :LRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=409 Number of alignments=143 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1fc6A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1fc6A/merged-local-a2m # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 5 :PRLCHLRKG 1fc6A 147 :SRLAALRRG T0340 14 :PQGYGFNLHSDK 1fc6A 160 :VTGVGLEITYDG T0340 26 :SRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1fc6A 173 :SGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVL Number of specific fragments extracted= 3 number of extra gaps= 0 total=412 Number of alignments=144 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 2 :MLRPRLCHLRKGPQ 1fc6A 149 :LAALRRGTAGSVTG T0340 16 :GYGFNLHSDKS 1fc6A 164 :GLEITYDGGSG T0340 28 :PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1fc6A 175 :KDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0340 76 :EDEARLLVVGP 1fc6A 224 :DSQVEVVLHAP Number of specific fragments extracted= 4 number of extra gaps= 0 total=416 Number of alignments=145 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 2 :MLRPRLCHLRKGPQ 1fc6A 149 :LAALRRGTAGSVTG T0340 16 :GYGFNLHSDKS 1fc6A 164 :GLEITYDGGSG T0340 28 :PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1fc6A 175 :KDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0340 76 :EDEARLLVVGP 1fc6A 224 :DSQVEVVLHAP Number of specific fragments extracted= 4 number of extra gaps= 0 total=420 Number of alignments=146 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRP 1fc6A 149 :LAALRRGTAGSVTGVGLEITYDGGSG T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIK 1fc6A 176 :DVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQ T0340 74 :AREDEARLLVVGP 1fc6A 222 :EADSQVEVVLHAP Number of specific fragments extracted= 3 number of extra gaps= 0 total=423 Number of alignments=147 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRP 1fc6A 149 :LAALRRGTAGSVTGVGLEITYDGGSG T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIK 1fc6A 176 :DVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQ T0340 74 :AREDEARLLVVGP 1fc6A 222 :EADSQVEVVLHAP Number of specific fragments extracted= 3 number of extra gaps= 0 total=426 Number of alignments=148 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 1fc6A 149 :LAALRRGTAGSVTGVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKA 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQG T0340 75 :REDEARLLVVGP 1fc6A 223 :ADSQVEVVLHAP Number of specific fragments extracted= 3 number of extra gaps= 0 total=429 Number of alignments=149 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1fc6A 150 :AALRRGTAGSVTGVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKA 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQG T0340 75 :REDEARLLVVGPS 1fc6A 223 :ADSQVEVVLHAPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=432 Number of alignments=150 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 16 :GYGFNLHSDKSRP 1fc6A 162 :GVGLEITYDGGSG T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKA 1fc6A 176 :DVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQG Number of specific fragments extracted= 2 number of extra gaps= 0 total=434 Number of alignments=151 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 7 :LCHLRKGPQ 1fc6A 149 :LAALRRGTA T0340 16 :GYGFNLHSDKSRP 1fc6A 162 :GVGLEITYDGGSG T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1fc6A 176 :DVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0340 76 :EDEARLLVV 1fc6A 224 :DSQVEVVLH Number of specific fragments extracted= 4 number of extra gaps= 0 total=438 Number of alignments=152 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 23 :SDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1fc6A 170 :DGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0340 76 :EDEARLLVVGPS 1fc6A 224 :DSQVEVVLHAPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=440 Number of alignments=153 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 13 :GPQ 1fc6A 157 :AGS T0340 16 :GYGFNLHSDKSRP 1fc6A 162 :GVGLEITYDGGSG T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASI 1fc6A 176 :DVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLL T0340 74 :AREDEARLLVVGPS 1fc6A 222 :EADSQVEVVLHAPG Number of specific fragments extracted= 4 number of extra gaps= 0 total=444 Number of alignments=154 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 16 :GYGFNLHSDKS 1fc6A 162 :GVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0340 76 :EDEARLLVVGP 1fc6A 224 :DSQVEVVLHAP Number of specific fragments extracted= 3 number of extra gaps= 0 total=447 Number of alignments=155 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 15 :QGYGFNLHSDKS 1fc6A 161 :TGVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0340 76 :EDEARLLVV 1fc6A 224 :DSQVEVVLH Number of specific fragments extracted= 3 number of extra gaps= 0 total=450 Number of alignments=156 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 15 :QGYGFNLHSDKS 1fc6A 161 :TGVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0340 76 :EDEARLLVVGPST 1fc6A 224 :DSQVEVVLHAPGA Number of specific fragments extracted= 3 number of extra gaps= 0 total=453 Number of alignments=157 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 13 :GPQ 1fc6A 157 :AGS T0340 16 :GYGFNLHSDKS 1fc6A 162 :GVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASI 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLL T0340 73 :KAREDEARLLVVGP 1fc6A 221 :GEADSQVEVVLHAP Number of specific fragments extracted= 4 number of extra gaps= 0 total=457 Number of alignments=158 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 16 :GYGFNLHSDKS 1fc6A 162 :GVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVL Number of specific fragments extracted= 2 number of extra gaps= 0 total=459 Number of alignments=159 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 15 :QGYGFNLHSDKS 1fc6A 161 :TGVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLH Number of specific fragments extracted= 2 number of extra gaps= 0 total=461 Number of alignments=160 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 12 :KGPQGYGFNLHSDKS 1fc6A 158 :GSVTGVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=463 Number of alignments=161 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0340 13 :GPQGYGFNLHSDKS 1fc6A 159 :SVTGVGLEITYDGG T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKA 1fc6A 174 :GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQG T0340 75 :REDEARLLVVGPS 1fc6A 223 :ADSQVEVVLHAPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=466 Number of alignments=162 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n7eA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1n7eA expands to /projects/compbio/data/pdb/1n7e.pdb.gz 1n7eA:# T0340 read from 1n7eA/merged-local-a2m # 1n7eA read from 1n7eA/merged-local-a2m # adding 1n7eA to template set # found chain 1n7eA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=469 Number of alignments=163 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1n7eA 669 :IIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=472 Number of alignments=164 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7eA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=475 Number of alignments=165 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7eA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQT Number of specific fragments extracted= 3 number of extra gaps= 0 total=478 Number of alignments=166 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1n7eA 669 :IIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=481 Number of alignments=167 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7eA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=484 Number of alignments=168 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRP 1n7eA 670 :IYTVELKRYGGPLGITISGTEEPF T0340 29 :GQYIRSVDPGSPAARSG 1n7eA 695 :PIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=487 Number of alignments=169 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRP 1n7eA 670 :IYTVELKRYGGPLGITISGTEEPF T0340 29 :GQYIRSVDPGSPAARSG 1n7eA 695 :PIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=490 Number of alignments=170 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1n7eA)G667 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRP 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEEPF T0340 29 :GQYIRSVDPGSPAARSG 1n7eA 695 :PIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQT Number of specific fragments extracted= 3 number of extra gaps= 0 total=493 Number of alignments=171 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1n7eA)G667 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRP 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEEPF T0340 29 :GQYIRSVDPGSPAARSG 1n7eA 695 :PIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQT T0340 88 :TR 1n7eA 758 :PA Number of specific fragments extracted= 4 number of extra gaps= 0 total=497 Number of alignments=172 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7eA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=500 Number of alignments=173 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7eA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=503 Number of alignments=174 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1n7eA)G667 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ T0340 89 :RL 1n7eA 757 :QP Number of specific fragments extracted= 4 number of extra gaps= 0 total=507 Number of alignments=175 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1n7eA)G667 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ T0340 87 :STRL 1n7eA 757 :QPAS Number of specific fragments extracted= 4 number of extra gaps= 0 total=511 Number of alignments=176 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7eA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKI Number of specific fragments extracted= 3 number of extra gaps= 0 total=514 Number of alignments=177 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7eA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIK Number of specific fragments extracted= 3 number of extra gaps= 0 total=517 Number of alignments=178 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1n7eA)G667 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=520 Number of alignments=179 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7eA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1n7eA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=523 Number of alignments=180 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1nf3C/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1nf3C expands to /projects/compbio/data/pdb/1nf3.pdb.gz 1nf3C:# T0340 read from 1nf3C/merged-local-a2m # 1nf3C read from 1nf3C/merged-local-a2m # adding 1nf3C to template set # found chain 1nf3C in template set T0340 7 :LCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1nf3C 169 :LGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPA Number of specific fragments extracted= 2 number of extra gaps= 0 total=525 Number of alignments=181 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1nf3C 171 :FYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPA Number of specific fragments extracted= 2 number of extra gaps= 0 total=527 Number of alignments=182 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRP 1nf3C 155 :HRRVRLCKYGTEKPLGFYIRDGSSVR T0340 29 :GQYIRSVDPGSPAARSG 1nf3C 191 :GIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=530 Number of alignments=183 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRP 1nf3C 155 :HRRVRLCKYGTEKPLGFYIRDGSSVR T0340 29 :GQYIRSVDPGSPAARSG 1nf3C 191 :GIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=533 Number of alignments=184 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 4 :RPRLCHLRK 1nf3C 154 :THRRVRLCK T0340 13 :GPQGYGFNLHSDKS 1nf3C 165 :TEKPLGFYIRDGSS T0340 27 :RPGQYIRSVDPGSPAARSG 1nf3C 189 :VPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPA Number of specific fragments extracted= 4 number of extra gaps= 0 total=537 Number of alignments=185 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 3 :LRPRLCHLRK 1nf3C 153 :ETHRRVRLCK T0340 13 :GPQGYGFNLHSDKS 1nf3C 165 :TEKPLGFYIRDGSS T0340 27 :RPGQYIRSVDPGSPAARSG 1nf3C 189 :VPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPAN Number of specific fragments extracted= 4 number of extra gaps= 0 total=541 Number of alignments=186 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 6 :RLCHLRK 1nf3C 156 :RRVRLCK T0340 13 :GPQGYGFNLHSDK 1nf3C 165 :TEKPLGFYIRDGS T0340 26 :SRPGQYIRSVDPGSPAARSG 1nf3C 188 :KVPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPAN Number of specific fragments extracted= 4 number of extra gaps= 0 total=545 Number of alignments=187 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 5 :PRLCHLRK 1nf3C 155 :HRRVRLCK T0340 13 :GPQGYGFNLHSDK 1nf3C 165 :TEKPLGFYIRDGS T0340 26 :SRPGQYIRSVDPGSPAARSG 1nf3C 188 :KVPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPAN Number of specific fragments extracted= 4 number of extra gaps= 0 total=549 Number of alignments=188 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 2 :MLRPRLCHLRKGP 1nf3C 152 :PETHRRVRLCKYG T0340 15 :QGYGFNLHSDK 1nf3C 167 :KPLGFYIRDGS T0340 26 :SRPGQYIRSVDPGSPAARSG 1nf3C 188 :KVPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=553 Number of alignments=189 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 2 :MLRPRLCHLRKGPQ 1nf3C 152 :PETHRRVRLCKYGT T0340 16 :GYGFNLHSDK 1nf3C 168 :PLGFYIRDGS T0340 26 :SRP 1nf3C 184 :HGL T0340 29 :GQYIRSVDPGSPAARSG 1nf3C 191 :GIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQRN Number of specific fragments extracted= 5 number of extra gaps= 0 total=558 Number of alignments=190 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 6 :RLCHLRKGP 1nf3C 156 :RRVRLCKYG T0340 15 :QGYGFNLHSDKS 1nf3C 167 :KPLGFYIRDGSS T0340 27 :RPGQYIRSVDPGSPAARSG 1nf3C 189 :VPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRP Number of specific fragments extracted= 4 number of extra gaps= 0 total=562 Number of alignments=191 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 6 :RLCHLRKGP 1nf3C 156 :RRVRLCKYG T0340 15 :QGYGFNLHSDKS 1nf3C 167 :KPLGFYIRDGSS T0340 27 :RPGQYIRSVDPGSPAARSG 1nf3C 189 :VPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPA Number of specific fragments extracted= 4 number of extra gaps= 0 total=566 Number of alignments=192 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 2 :MLRPRLCHLRKGP 1nf3C 152 :PETHRRVRLCKYG T0340 15 :QGYGFNLHSDKS 1nf3C 167 :KPLGFYIRDGSS T0340 27 :RPGQYIRSVDPGSPAARSG 1nf3C 189 :VPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=570 Number of alignments=193 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 2 :MLRPRLCHLRKGPQ 1nf3C 152 :PETHRRVRLCKYGT T0340 16 :GYGFNLHSDKS 1nf3C 168 :PLGFYIRDGSS T0340 30 :QYIRSVDPGSPAARSG 1nf3C 192 :IFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=574 Number of alignments=194 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1nf3C 171 :FYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITV Number of specific fragments extracted= 2 number of extra gaps= 0 total=576 Number of alignments=195 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 8 :CHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1nf3C 170 :GFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVR Number of specific fragments extracted= 2 number of extra gaps= 0 total=578 Number of alignments=196 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 3 :LRPRLCHL 1nf3C 153 :ETHRRVRL T0340 11 :RKGPQGYGFNLHSDKS 1nf3C 163 :YGTEKPLGFYIRDGSS T0340 27 :RPGQYIRSVDPGSPAARSG 1nf3C 189 :VPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=582 Number of alignments=197 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0340 4 :RPRLCHLR 1nf3C 154 :THRRVRLC T0340 12 :KGPQGYGFNLHSDKS 1nf3C 164 :GTEKPLGFYIRDGSS T0340 27 :RPGQYIRSVDPGSPAARSG 1nf3C 189 :VPGIFISRLVPGGLAQSTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1nf3C 209 :LAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=586 Number of alignments=198 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1r6jA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1r6jA/merged-local-a2m # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 1 :SMLRPRLCHLRKGPQG 1r6jA 192 :GAMDPRTITMHKDSTG T0340 17 :YGFNLHSD 1r6jA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=589 Number of alignments=199 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 3 :LRPRLCHLRKGPQG 1r6jA 194 :MDPRTITMHKDSTG T0340 17 :YGFNLHSD 1r6jA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1r6jA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=592 Number of alignments=200 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 1 :SMLRPRLCHLRKGPQG 1r6jA 192 :GAMDPRTITMHKDSTG T0340 17 :YGFNLHSD 1r6jA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=595 Number of alignments=201 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 2 :MLRPRLCHLRKGPQG 1r6jA 193 :AMDPRTITMHKDSTG T0340 17 :YGFNLHSD 1r6jA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=598 Number of alignments=202 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 3 :LRPRLCHLRKGP 1r6jA 194 :MDPRTITMHKDS T0340 15 :QGYGFNLH 1r6jA 207 :GHVGFIFK T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 215 :NGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=601 Number of alignments=203 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 4 :RPRLCHLRKGP 1r6jA 195 :DPRTITMHKDS T0340 15 :QGYGFNLH 1r6jA 207 :GHVGFIFK T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 215 :NGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=604 Number of alignments=204 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 1 :SMLRPRLCHLRKGPQG 1r6jA 192 :GAMDPRTITMHKDSTG T0340 17 :YGFNLHSDK 1r6jA 209 :VGFIFKNGK T0340 32 :IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 218 :ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=607 Number of alignments=205 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 2 :MLRPRLCHLRKGPQG 1r6jA 193 :AMDPRTITMHKDSTG T0340 17 :YGFNLHSDK 1r6jA 209 :VGFIFKNGK T0340 32 :IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 218 :ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=610 Number of alignments=206 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 1 :SMLRPRLCHLRKGPQG 1r6jA 192 :GAMDPRTITMHKDSTG T0340 17 :YGFNLHSD 1r6jA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1r6jA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=613 Number of alignments=207 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 1 :SMLRPRLCHLRKGPQG 1r6jA 192 :GAMDPRTITMHKDSTG T0340 17 :YGFNLHSD 1r6jA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=616 Number of alignments=208 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 1 :SMLRPRLCHLRKGPQG 1r6jA 192 :GAMDPRTITMHKDSTG T0340 17 :YGFNLHSDK 1r6jA 209 :VGFIFKNGK T0340 32 :IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 218 :ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=619 Number of alignments=209 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 2 :MLRPRLCHLRKGPQG 1r6jA 193 :AMDPRTITMHKDSTG T0340 17 :YGFNLHSDK 1r6jA 209 :VGFIFKNGK T0340 32 :IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 218 :ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=622 Number of alignments=210 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 1 :SMLRPRLCHLRKGPQG 1r6jA 192 :GAMDPRTITMHKDSTG T0340 17 :YGFNLHSD 1r6jA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1r6jA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=625 Number of alignments=211 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 1 :SMLRPRLCHLRKGPQG 1r6jA 192 :GAMDPRTITMHKDSTG T0340 17 :YGFNLHSD 1r6jA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=628 Number of alignments=212 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 32 :IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1r6jA 218 :ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM Number of specific fragments extracted= 1 number of extra gaps= 0 total=629 Number of alignments=213 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 6 :RLCHLRKGPQGYGFNLH 1r6jA 197 :RTITMHKDSTGHVGFIF T0340 28 :PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1r6jA 214 :KNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM Number of specific fragments extracted= 2 number of extra gaps= 0 total=631 Number of alignments=214 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 1 :SMLRPRLCHLRKGPQGYGFNLHSDK 1r6jA 192 :GAMDPRTITMHKDSTGHVGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 2 number of extra gaps= 0 total=633 Number of alignments=215 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0340 2 :MLRPRLCHLRK 1r6jA 193 :AMDPRTITMHK T0340 13 :GPQGYGFNLHSD 1r6jA 205 :STGHVGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1r6jA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=636 Number of alignments=216 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zokA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1zokA expands to /projects/compbio/data/pdb/1zok.pdb.gz 1zokA:# T0340 read from 1zokA/merged-local-a2m # 1zokA read from 1zokA/merged-local-a2m # adding 1zokA to template set # found chain 1zokA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1zokA)E221 T0340 5 :PRLCHLRKGPQGYGFNLHSDK 1zokA 222 :YEEITLERGNSGLGFSIAGGT T0340 26 :SRPGQYIRSVDPGSPAARSG 1zokA 249 :DDSSIFITKIITGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1zokA 270 :LRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRRK Number of specific fragments extracted= 3 number of extra gaps= 0 total=639 Number of alignments=217 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set T0340 6 :RLCHLRKGPQGYGFNLHSDK 1zokA 223 :EEITLERGNSGLGFSIAGGT T0340 26 :SRPGQYIRSVDPGSPAARSG 1zokA 249 :DDSSIFITKIITGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1zokA 270 :LRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=642 Number of alignments=218 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1zokA)E221 T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1zokA 222 :YEEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1zokA 250 :DSSIFITKIITGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1zokA 270 :LRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=645 Number of alignments=219 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1zokA 222 :YEEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1zokA 250 :DSSIFITKIITGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1zokA 270 :LRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=648 Number of alignments=220 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1zokA)E221 T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1zokA 222 :YEEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1zokA 250 :DSSIFITKIITGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1zokA 270 :LRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVK Number of specific fragments extracted= 3 number of extra gaps= 0 total=651 Number of alignments=221 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set T0340 6 :RLCHLRKGPQGYGFNLHSDKS 1zokA 223 :EEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1zokA 250 :DSSIFITKIITGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1zokA 270 :LRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=654 Number of alignments=222 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1rgrA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1rgrA expands to /projects/compbio/data/pdb/1rgr.pdb.gz 1rgrA:# T0340 read from 1rgrA/merged-local-a2m # 1rgrA read from 1rgrA/merged-local-a2m # adding 1rgrA to template set # found chain 1rgrA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1rgrA)E62 Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0340)H22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0340)S23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0340)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0340)L63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0340 5 :PRLCHLRKGPQGYGFN 1rgrA 63 :YEEITLERGNSGLGFS T0340 24 :DK 1rgrA 82 :GT T0340 26 :SRPGQYIRSVDPGSPAARSG 1rgrA 90 :DDPSIFITKIIPGGAAAQDG T0340 48 :AQDRLIEVNGQNVEG 1rgrA 113 :VNDSILFVNEVDVRE T0340 65 :HAEVVASIKAREDEARLLVVGPS 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRRK Number of specific fragments extracted= 5 number of extra gaps= 3 total=659 Number of alignments=223 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0340)H22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0340)S23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0340)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0340)L63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0340 6 :RLCHLRKGPQGYGFN 1rgrA 64 :EEITLERGNSGLGFS T0340 24 :DK 1rgrA 82 :GT T0340 26 :SRPGQYIRSVDPGSPAARSG 1rgrA 90 :DDPSIFITKIIPGGAAAQDG T0340 48 :AQDRLIEVNGQNVEG 1rgrA 113 :VNDSILFVNEVDVRE T0340 65 :HAEVVASIKAREDEARLLVVGPS 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRRK Number of specific fragments extracted= 5 number of extra gaps= 3 total=664 Number of alignments=224 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1rgrA)E62 Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0340)H22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0340)S23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0340)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0340)L63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0340 5 :PRLCHLRKGPQGYGFN 1rgrA 63 :YEEITLERGNSGLGFS T0340 24 :DKS 1rgrA 82 :GTD T0340 27 :RPGQYIRSVDPGSPAARSG 1rgrA 91 :DPSIFITKIIPGGAAAQDG T0340 48 :AQDRLIEVNGQNVEG 1rgrA 113 :VNDSILFVNEVDVRE T0340 65 :HAEVVASIKAREDEARLLVVGP 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRR Number of specific fragments extracted= 5 number of extra gaps= 3 total=669 Number of alignments=225 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0340)H22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0340)S23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0340)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0340)L63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0340 5 :PRLCHLRKGPQGYGFN 1rgrA 63 :YEEITLERGNSGLGFS T0340 24 :DKS 1rgrA 82 :GTD T0340 27 :RPGQYIRSVDPGSPAARSG 1rgrA 91 :DPSIFITKIIPGGAAAQDG T0340 48 :AQDRLIEVNGQNVEG 1rgrA 113 :VNDSILFVNEVDVRE T0340 65 :HAEVVASIKAREDEARLLVVGP 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRR T0340 87 :S 1rgrA 153 :P Number of specific fragments extracted= 6 number of extra gaps= 3 total=675 Number of alignments=226 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1rgrA)E62 Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0340)H22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0340)S23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0340)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0340)L63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0340 5 :PRLCHLRKGPQGYGFN 1rgrA 63 :YEEITLERGNSGLGFS T0340 24 :DKS 1rgrA 82 :GTD T0340 27 :RPGQYIRSVDPGSPAARSG 1rgrA 91 :DPSIFITKIIPGGAAAQDG T0340 48 :AQDRLIEVNGQNVEG 1rgrA 113 :VNDSILFVNEVDVRE T0340 65 :HAEVVASIKAREDEARLLVV 1rgrA 130 :HSAAVEALKEAGSIVRLYVM Number of specific fragments extracted= 5 number of extra gaps= 3 total=680 Number of alignments=227 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0340)H22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0340)S23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0340)R47 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0340)L63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0340 6 :RLCHLRKGPQGYGFN 1rgrA 64 :EEITLERGNSGLGFS T0340 24 :DKS 1rgrA 82 :GTD T0340 27 :RPGQYIRSVDPGSPAARSG 1rgrA 91 :DPSIFITKIIPGGAAAQDG T0340 48 :AQDRLIEVNGQNVEG 1rgrA 113 :VNDSILFVNEVDVRE T0340 65 :HAEVVASIKAREDEARLLVVGP 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRR Number of specific fragments extracted= 5 number of extra gaps= 3 total=685 Number of alignments=228 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 2fe5A/merged-local-a2m # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRP 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIGNQ T0340 29 :GQYIRSVDPGSPAARSG 2fe5A 254 :SIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=688 Number of alignments=229 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRP 2fe5A 223 :TIMEVNLLKGPKGLGFSIAGGIGNQ T0340 29 :GQYIRSVDPGSPAARSG 2fe5A 254 :SIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=691 Number of alignments=230 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGI T0340 26 :SRPGQYIRSVDPGSPAARSG 2fe5A 251 :GDNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=694 Number of alignments=231 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDK 2fe5A 223 :TIMEVNLLKGPKGLGFSIAGGI T0340 26 :SRPGQYIRSVDPGSPAARSG 2fe5A 251 :GDNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=697 Number of alignments=232 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=700 Number of alignments=233 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=703 Number of alignments=234 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGI T0340 26 :SRPGQYIRSVDPGSPAARSG 2fe5A 251 :GDNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=706 Number of alignments=235 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDK 2fe5A 223 :TIMEVNLLKGPKGLGFSIAGGI T0340 26 :SRPGQYIRSVDPGSPAARSG 2fe5A 251 :GDNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=709 Number of alignments=236 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fe5A)S221 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPG 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIGNQH T0340 30 :QYIRSVDPGSPAARSG 2fe5A 255 :IYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=712 Number of alignments=237 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fe5A)S221 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGI T0340 26 :SRPGQYIRSVDPGSPAARSG 2fe5A 251 :GDNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=715 Number of alignments=238 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=718 Number of alignments=239 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 2fe5A 223 :TIMEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=721 Number of alignments=240 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fe5A)S221 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPG 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIGNQH T0340 30 :QYIRSVDPGSPAARSG 2fe5A 255 :IYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=724 Number of alignments=241 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fe5A)S221 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=727 Number of alignments=242 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVA Number of specific fragments extracted= 3 number of extra gaps= 0 total=730 Number of alignments=243 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 6 :RLCHLRKGPQGYGFNLHSDKS 2fe5A 225 :MEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=733 Number of alignments=244 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fe5A)S221 Warning: unaligning (T0340)T88 because last residue in template chain is (2fe5A)S314 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=736 Number of alignments=245 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0340 27 :RPGQYIRSVDPGSPAARSG 2fe5A 252 :DNSIYITKIIEGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fe5A 272 :LQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=739 Number of alignments=246 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1wf7A/merged-local-a2m # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 8 :CHLRKG 1wf7A 9 :VSLVGP T0340 15 :QGYGFNLHSDKS 1wf7A 15 :APWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRA Number of specific fragments extracted= 3 number of extra gaps= 0 total=742 Number of alignments=247 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 7 :LCHLRKG 1wf7A 8 :SVSLVGP T0340 15 :QGYGFNLHSDKS 1wf7A 15 :APWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 3 number of extra gaps= 0 total=745 Number of alignments=248 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 3 :LRPRLCHLRKGP 1wf7A 4 :GSSGSVSLVGPA T0340 16 :GYGFNLHSDKS 1wf7A 16 :PWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRA Number of specific fragments extracted= 3 number of extra gaps= 0 total=748 Number of alignments=249 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 4 :RPRLCHLRKGP 1wf7A 5 :SSGSVSLVGPA T0340 16 :GYGFNLHSDKS 1wf7A 16 :PWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 3 number of extra gaps= 0 total=751 Number of alignments=250 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 13 :GPQGYGFNLHSDKS 1wf7A 13 :GPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=753 Number of alignments=251 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 13 :GPQGYGFNLHSDKS 1wf7A 13 :GPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 2 number of extra gaps= 0 total=755 Number of alignments=252 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 13 :GPQGYGFNLHSDKSRP 1wf7A 13 :GPAPWGFRLQGGKDFN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1wf7A 30 :PLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 2 number of extra gaps= 0 total=757 Number of alignments=253 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 13 :GPQGYGFNLHSDKSRP 1wf7A 13 :GPAPWGFRLQGGKDFN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1wf7A 30 :PLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 2 number of extra gaps= 0 total=759 Number of alignments=254 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 1 :SMLRPRLCHLR 1wf7A 2 :SSGSSGSVSLV T0340 13 :GPQGYGFNLHSDKSRP 1wf7A 13 :GPAPWGFRLQGGKDFN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1wf7A 30 :PLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 3 number of extra gaps= 0 total=762 Number of alignments=255 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 1 :SMLRPRLCHLR 1wf7A 2 :SSGSSGSVSLV T0340 13 :GPQGYGFNLHSDKSRP 1wf7A 13 :GPAPWGFRLQGGKDFN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1wf7A 30 :PLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 3 number of extra gaps= 0 total=765 Number of alignments=256 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 13 :GPQGYGFNLHSDKS 1wf7A 13 :GPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=767 Number of alignments=257 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 13 :GPQGYGFNLHSDKS 1wf7A 13 :GPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRA Number of specific fragments extracted= 2 number of extra gaps= 0 total=769 Number of alignments=258 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 1 :SMLRPRLCHLR 1wf7A 2 :SSGSSGSVSLV T0340 13 :GPQGYGFNLHSDKS 1wf7A 13 :GPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRA T0340 88 :TRL 1wf7A 89 :AAA Number of specific fragments extracted= 4 number of extra gaps= 0 total=773 Number of alignments=259 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 1 :SMLRPRLCHLR 1wf7A 2 :SSGSSGSVSLV T0340 13 :GPQGYGFNLHSDKS 1wf7A 13 :GPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRA T0340 87 :STR 1wf7A 94 :EPV Number of specific fragments extracted= 4 number of extra gaps= 0 total=777 Number of alignments=260 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 11 :RKGPQGYGFNLHSDKS 1wf7A 11 :LVGPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=779 Number of alignments=261 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 12 :KGPQGYGFNLHSDKS 1wf7A 12 :VGPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=781 Number of alignments=262 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKS 1wf7A 2 :SSGSSGSVSLVGPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAA Number of specific fragments extracted= 2 number of extra gaps= 0 total=783 Number of alignments=263 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0340 8 :CHLRKGPQGYGFNLHSDKS 1wf7A 8 :SVSLVGPAPWGFRLQGGKD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 1wf7A 28 :NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASA Number of specific fragments extracted= 2 number of extra gaps= 0 total=785 Number of alignments=264 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1i16/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1i16/merged-local-a2m # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1i16 29 :TVCTVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVI Number of specific fragments extracted= 3 number of extra gaps= 0 total=788 Number of alignments=265 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDE 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG T0340 79 :ARLLVVGP 1i16 110 :VTIVIRRK Number of specific fragments extracted= 4 number of extra gaps= 0 total=792 Number of alignments=266 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1i16 29 :TVCTVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDE 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG T0340 79 :ARLLVVGP 1i16 110 :VTIVIRRK Number of specific fragments extracted= 4 number of extra gaps= 0 total=796 Number of alignments=267 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDK 1i16 30 :VCTVTLEKMSAGLGFSLEGGK T0340 26 :SRPGQYIRSVDPGSPAARSG 1i16 55 :GDKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0340 76 :EDEARLLVVGPS 1i16 107 :DGPVTIVIRRKS Number of specific fragments extracted= 4 number of extra gaps= 0 total=800 Number of alignments=268 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDK 1i16 29 :TVCTVTLEKMSAGLGFSLEGGK T0340 26 :SRPGQYIRSVDPGSPAARSG 1i16 55 :GDKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0340 76 :EDEARLLVVGPS 1i16 107 :DGPVTIVIRRKS Number of specific fragments extracted= 4 number of extra gaps= 0 total=804 Number of alignments=269 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDK 1i16 27 :EATVCTVTLEKMSAGLGFSLEGGK T0340 26 :SRPGQYIRSVDPGSPAARSG 1i16 55 :GDKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0340 76 :EDEARLLVVGPSTRL 1i16 107 :DGPVTIVIRRKSLQS Number of specific fragments extracted= 4 number of extra gaps= 0 total=808 Number of alignments=270 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGK T0340 26 :SRPGQYIRSVDPGSPAARSG 1i16 55 :GDKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0340 76 :EDEARLLVVGPSTRL 1i16 107 :DGPVTIVIRRKSLQS Number of specific fragments extracted= 4 number of extra gaps= 0 total=812 Number of alignments=271 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1i16 30 :VCTVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0340 76 :EDEARLLVVGP 1i16 107 :DGPVTIVIRRK Number of specific fragments extracted= 4 number of extra gaps= 0 total=816 Number of alignments=272 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1i16 29 :TVCTVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0340 76 :EDEARLLVVGPS 1i16 107 :DGPVTIVIRRKS Number of specific fragments extracted= 4 number of extra gaps= 0 total=820 Number of alignments=273 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKS 1i16 27 :EATVCTVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0340 76 :EDEARLLVVGPSTRL 1i16 107 :DGPVTIVIRRKSLQS Number of specific fragments extracted= 4 number of extra gaps= 0 total=824 Number of alignments=274 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0340 76 :EDEARLLVVGPSTR 1i16 107 :DGPVTIVIRRKSLQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=828 Number of alignments=275 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 7 :LCHLRKGPQGYGFNLHSDKS 1i16 32 :TVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVI Number of specific fragments extracted= 3 number of extra gaps= 0 total=831 Number of alignments=276 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 7 :LCHLRKGPQGYGFNLHSDKS 1i16 32 :TVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=834 Number of alignments=277 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKS 1i16 27 :EATVCTVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKSLQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=837 Number of alignments=278 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGKG T0340 27 :RPGQYIRSVDPGSPAARSG 1i16 56 :DKPLTINRIFKGAASEQSE T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1i16 76 :VQPGDEILQLGGTAMQGLTRFEAWNIIKALP T0340 77 :DEARLLVVGPSTRL 1i16 108 :GPVTIVIRRKSLQS Number of specific fragments extracted= 4 number of extra gaps= 0 total=841 Number of alignments=279 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ihjA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1ihjA/merged-local-a2m # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 3 :LRPRLCHLRKGPQ 1ihjA 13 :ELIHMVTLDKTGK T0340 16 :GYGFNLHSD 1ihjA 27 :SFGICIVRG T0340 25 :KS 1ihjA 38 :KD T0340 27 :RPGQYIRSVDPGSPAARSG 1ihjA 45 :TTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 5 number of extra gaps= 0 total=846 Number of alignments=280 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 4 :RPRLCHLRKGPQ 1ihjA 14 :LIHMVTLDKTGK T0340 16 :GYGFNLHSD 1ihjA 27 :SFGICIVRG T0340 25 :KS 1ihjA 38 :KD T0340 27 :RPGQYIRSVDPGSPAARSG 1ihjA 45 :TTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 5 number of extra gaps= 0 total=851 Number of alignments=281 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 5 :PRLCHLRKGPQ 1ihjA 15 :IHMVTLDKTGK T0340 16 :GYGFNLHSDKSRP 1ihjA 27 :SFGICIVRGEVKD T0340 29 :GQYIRSVDPGSPAARSG 1ihjA 47 :GIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=855 Number of alignments=282 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 5 :PRLCHLRKGPQ 1ihjA 15 :IHMVTLDKTGK T0340 16 :GYGFNLHSDKSRP 1ihjA 27 :SFGICIVRGEVKD T0340 29 :GQYIRSVDPGSPAARSG 1ihjA 47 :GIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=859 Number of alignments=283 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 5 :PRLCHLRK 1ihjA 15 :IHMVTLDK T0340 13 :GPQGYGFNLHSDKSRP 1ihjA 24 :GKKSFGICIVRGEVKD T0340 29 :GQYIRSVDPGSPAARSG 1ihjA 47 :GIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEI Number of specific fragments extracted= 4 number of extra gaps= 0 total=863 Number of alignments=284 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 5 :PRLCHLRK 1ihjA 15 :IHMVTLDK T0340 13 :GPQGYGFNLHSDKSR 1ihjA 24 :GKKSFGICIVRGEVK T0340 28 :PGQYIRSVDPGSPAARSG 1ihjA 46 :TGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEI Number of specific fragments extracted= 4 number of extra gaps= 0 total=867 Number of alignments=285 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0340)P86 because last residue in template chain is (1ihjA)F105 T0340 4 :RPRLCHLRK 1ihjA 14 :LIHMVTLDK T0340 13 :GPQGYGFNLHSDKS 1ihjA 24 :GKKSFGICIVRGEV T0340 27 :RPGQYIRSVDPGSPAARS 1ihjA 45 :TTGIFIKGIVPDSPAHLC T0340 45 :GLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1ihjA 64 :RLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 0 total=871 Number of alignments=286 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0340)P86 because last residue in template chain is (1ihjA)F105 T0340 5 :PRLCHLRKGPQ 1ihjA 15 :IHMVTLDKTGK T0340 16 :GYGFNLHSDK 1ihjA 27 :SFGICIVRGE T0340 26 :SRPGQYIRSVDPGSPAARSG 1ihjA 44 :KTTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 0 total=875 Number of alignments=287 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 5 :PRLCHLRKGPQ 1ihjA 15 :IHMVTLDKTGK T0340 16 :GYGFNLHSDK 1ihjA 27 :SFGICIVRGE T0340 26 :SRPGQYIRSVDPGSPAARSG 1ihjA 44 :KTTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 0 total=879 Number of alignments=288 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0340)P86 because last residue in template chain is (1ihjA)F105 T0340 3 :LRPRLCHLRKGPQ 1ihjA 13 :ELIHMVTLDKTGK T0340 16 :GYGFNLHSDK 1ihjA 27 :SFGICIVRGE T0340 29 :GQYIRSVDPGSPAARSG 1ihjA 47 :GIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 0 total=883 Number of alignments=289 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 Warning: unaligning (T0340)P86 because last residue in template chain is (1ihjA)F105 T0340 3 :LRPRLCHLRKGP 1ihjA 13 :ELIHMVTLDKTG T0340 15 :QGYGFNLHSDK 1ihjA 26 :KSFGICIVRGE T0340 27 :RP 1ihjA 43 :TK T0340 29 :GQYIRSVDPGSPAARSG 1ihjA 47 :GIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 5 number of extra gaps= 1 total=888 Number of alignments=290 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 5 :PRLCHLRKGPQ 1ihjA 15 :IHMVTLDKTGK T0340 16 :GYGFNLHSDKS 1ihjA 27 :SFGICIVRGEV T0340 27 :RPGQYIRSVDPGSPAARSG 1ihjA 45 :TTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=892 Number of alignments=291 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 6 :RLCHLRKGPQ 1ihjA 16 :HMVTLDKTGK T0340 16 :GYGFNLHSDKS 1ihjA 27 :SFGICIVRGEV T0340 27 :RPGQYIRSVDPGSPAARSG 1ihjA 45 :TTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=896 Number of alignments=292 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0340)P86 because last residue in template chain is (1ihjA)F105 T0340 3 :LRPRLCHLRKGPQ 1ihjA 13 :ELIHMVTLDKTGK T0340 16 :GYGFNLHSDKS 1ihjA 27 :SFGICIVRGEV T0340 27 :RPGQYIRSVDPGSPAARSG 1ihjA 45 :TTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 0 total=900 Number of alignments=293 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0340)D24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 Warning: unaligning (T0340)P86 because last residue in template chain is (1ihjA)F105 T0340 3 :LRPRLCHLRKGP 1ihjA 13 :ELIHMVTLDKTG T0340 15 :QGYGFNLHS 1ihjA 26 :KSFGICIVR T0340 27 :RPGQYIRSVDPGSPAARSG 1ihjA 45 :TTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 1 total=904 Number of alignments=294 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 11 :RKGPQGYGFNLHSDKS 1ihjA 22 :KTGKKSFGICIVRGEV T0340 27 :RPGQYIRSVDPGSPAARSG 1ihjA 45 :TTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=907 Number of alignments=295 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0340 10 :LRKGPQGYGFNLHSDKS 1ihjA 21 :DKTGKKSFGICIVRGEV T0340 27 :RPGQYIRSVDPGSPAARSG 1ihjA 45 :TTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELE Number of specific fragments extracted= 3 number of extra gaps= 0 total=910 Number of alignments=296 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0340)P86 because last residue in template chain is (1ihjA)F105 T0340 3 :LRPRLCHLR 1ihjA 13 :ELIHMVTLD T0340 12 :KGPQGYGFNLHSDKS 1ihjA 23 :TGKKSFGICIVRGEV T0340 27 :RPGQYIRSVDPGSPAARSG 1ihjA 45 :TTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 0 total=914 Number of alignments=297 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0340)P86 because last residue in template chain is (1ihjA)F105 T0340 3 :LRPRLCHLRKGP 1ihjA 13 :ELIHMVTLDKTG T0340 15 :QGYGFNLHSDKS 1ihjA 26 :KSFGICIVRGEV T0340 27 :RPGQYIRSVDPGSPAARSG 1ihjA 45 :TTGIFIKGIVPDSPAHLCG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1ihjA 65 :LKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 0 total=918 Number of alignments=298 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1q3oA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1q3oA/merged-local-a2m # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 2 :MLRPRLCHLR 1q3oA 586 :IIKEKTVLLQ T0340 12 :KGPQGYGFNLHSDKSRPG 1q3oA 597 :KDSEGFGFVLRGAKAQTP T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1q3oA 628 :QYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=921 Number of alignments=299 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 3 :LRPRLCHLR 1q3oA 587 :IKEKTVLLQ T0340 12 :KGPQGYGFNLHSDKSRPG 1q3oA 597 :KDSEGFGFVLRGAKAQTP T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1q3oA 628 :QYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVM Number of specific fragments extracted= 3 number of extra gaps= 0 total=924 Number of alignments=300 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 2 :MLRPRLCHLRK 1q3oA 586 :IIKEKTVLLQK T0340 13 :GPQGYGFNLHSDKS 1q3oA 598 :DSEGFGFVLRGAKA T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1q3oA 625 :PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=927 Number of alignments=301 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 3 :LRPRLCHLRK 1q3oA 587 :IKEKTVLLQK T0340 13 :GPQGYGFNLHSDKS 1q3oA 598 :DSEGFGFVLRGAKA T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1q3oA 625 :PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVM Number of specific fragments extracted= 3 number of extra gaps= 0 total=930 Number of alignments=302 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 2 :MLRPRLCHLRKGPQ 1q3oA 586 :IIKEKTVLLQKKDS T0340 16 :GYGFNLHSDKS 1q3oA 601 :GFGFVLRGAKA T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1q3oA 625 :PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=933 Number of alignments=303 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 3 :LRPRLCHLRKGPQ 1q3oA 587 :IKEKTVLLQKKDS T0340 16 :GYGFNLHSDKS 1q3oA 601 :GFGFVLRGAKA T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1q3oA 625 :PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=936 Number of alignments=304 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 2 :MLRPRLCHLRK 1q3oA 586 :IIKEKTVLLQK T0340 13 :GPQGYGFNLHSDKSRPG 1q3oA 598 :DSEGFGFVLRGAKAQTP T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1q3oA 628 :QYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=939 Number of alignments=305 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 4 :RPRLCHLRK 1q3oA 588 :KEKTVLLQK T0340 13 :GPQGYGFNLHSDK 1q3oA 598 :DSEGFGFVLRGAK T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1q3oA 628 :QYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=942 Number of alignments=306 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 6 :RLCHLRKGPQ 1q3oA 590 :KTVLLQKKDS T0340 16 :GYGFNLHSDKSRPG 1q3oA 601 :GFGFVLRGAKAQTP T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 1q3oA 628 :QYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 3 number of extra gaps= 0 total=945 Number of alignments=307 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 6 :RLCHLRKGPQ 1q3oA 590 :KTVLLQKKDS T0340 16 :GYGFNLHSDK 1q3oA 601 :GFGFVLRGAK T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1q3oA 628 :QYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMV Number of specific fragments extracted= 3 number of extra gaps= 0 total=948 Number of alignments=308 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPG 1q3oA 589 :EKTVLLQKKDSEGFGFVLRGAKAQTP T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1q3oA 628 :QYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=950 Number of alignments=309 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 5 :PRLCHLRK 1q3oA 589 :EKTVLLQK T0340 13 :GPQGYGFNLHSDKS 1q3oA 598 :DSEGFGFVLRGAKA T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1q3oA 628 :QYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=953 Number of alignments=310 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 6 :RLCHLRKGP 1q3oA 590 :KTVLLQKKD T0340 15 :QGYGFNLHSDKS 1q3oA 600 :EGFGFVLRGAKA T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1q3oA 628 :QYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVM Number of specific fragments extracted= 3 number of extra gaps= 0 total=956 Number of alignments=311 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 6 :RLCHLRKGPQ 1q3oA 590 :KTVLLQKKDS T0340 16 :GYGFNLHSDKS 1q3oA 601 :GFGFVLRGAKA T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1q3oA 628 :QYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVM Number of specific fragments extracted= 3 number of extra gaps= 0 total=959 Number of alignments=312 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKS 1q3oA 587 :IKEKTVLLQKKDSEGFGFVLRGAKA T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1q3oA 625 :PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=961 Number of alignments=313 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 6 :RLCHLRKGPQGYGFNLHSDKS 1q3oA 591 :TVLLQKKDSEGFGFVLRGAKA T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1q3oA 625 :PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=963 Number of alignments=314 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 6 :RLCHLR 1q3oA 590 :KTVLLQ T0340 12 :KGPQGYGFNLHSDKS 1q3oA 597 :KDSEGFGFVLRGAKA T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1q3oA 625 :PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMV Number of specific fragments extracted= 3 number of extra gaps= 0 total=966 Number of alignments=315 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0340 6 :RLCHLR 1q3oA 590 :KTVLLQ T0340 12 :KGPQGYGFNLHSDKS 1q3oA 597 :KDSEGFGFVLRGAKA T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1q3oA 625 :PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVM Number of specific fragments extracted= 3 number of extra gaps= 0 total=969 Number of alignments=316 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kefA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1kefA expands to /projects/compbio/data/pdb/1kef.pdb.gz 1kefA:# T0340 read from 1kefA/merged-local-a2m # 1kefA read from 1kefA/merged-local-a2m # adding 1kefA to template set # found chain 1kefA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kefA)E1 T0340 5 :PRLCHLRKGPQGYGFNLHSDK 1kefA 2 :YEEITLERGNSGLGFSIAGGT T0340 26 :SRPGQYIRSVDPGSPAARSG 1kefA 29 :DDPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1kefA 50 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRK Number of specific fragments extracted= 3 number of extra gaps= 0 total=972 Number of alignments=317 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set T0340 6 :RLCHLRKGPQGYGFNLHSDK 1kefA 3 :EEITLERGNSGLGFSIAGGT T0340 26 :SRPGQYIRSVDPGSPAARSG 1kefA 29 :DDPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1kefA 50 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRK Number of specific fragments extracted= 3 number of extra gaps= 0 total=975 Number of alignments=318 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kefA)E1 T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1kefA 2 :YEEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1kefA 30 :DPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kefA 50 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=978 Number of alignments=319 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1kefA 2 :YEEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1kefA 30 :DPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kefA 50 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=981 Number of alignments=320 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kefA)E1 T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1kefA 2 :YEEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1kefA 30 :DPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1kefA 50 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVM Number of specific fragments extracted= 3 number of extra gaps= 0 total=984 Number of alignments=321 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set T0340 6 :RLCHLRKGPQGYGFNLHSDKS 1kefA 3 :EEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1kefA 30 :DPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kefA 50 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=987 Number of alignments=322 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1b8qA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1b8qA expands to /projects/compbio/data/pdb/1b8q.pdb.gz 1b8qA:# T0340 read from 1b8qA/merged-local-a2m # 1b8qA read from 1b8qA/merged-local-a2m # adding 1b8qA to template set # found chain 1b8qA in template set T0340 3 :LRPRLCHLRKGPQ 1b8qA 7 :PNVISVRLFKRKV T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 21 :GLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPSTRL 1b8qA 84 :ETHVVLILRGPEGFT Number of specific fragments extracted= 4 number of extra gaps= 0 total=991 Number of alignments=323 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 4 :RPRLCHLRKGPQ 1b8qA 8 :NVISVRLFKRKV T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 21 :GLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPST 1b8qA 84 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=995 Number of alignments=324 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 5 :PRLCHLRKG 1b8qA 9 :VISVRLFKR T0340 14 :PQGYGFNLHSDKSRPGQYIRSVDPGSPAARS 1b8qA 19 :VGGLGFLVKERVSKPPVIISDLIRGGAAEQS T0340 45 :GLRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1b8qA 51 :LIQAGDIILAVNDRPLVDLSYDSALEVLRGIA T0340 77 :DEARLLVVGP 1b8qA 85 :THVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=999 Number of alignments=325 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 2 :MLRPRLCHLRKGP 1b8qA 6 :EPNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 20 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1b8qA 84 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1003 Number of alignments=326 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 3 :LRPRLCHLRKGP 1b8qA 7 :PNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 20 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGP 1b8qA 84 :ETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1007 Number of alignments=327 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 4 :RPRLCHLRKGP 1b8qA 8 :NVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 20 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1b8qA 84 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1011 Number of alignments=328 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 4 :RPRLCHLRKGP 1b8qA 8 :NVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 20 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1b8qA 84 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1015 Number of alignments=329 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 2 :MLRPRLCHLRKGP 1b8qA 6 :EPNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 20 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGP 1b8qA 84 :ETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1019 Number of alignments=330 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 3 :LRPRLCHLRKGP 1b8qA 7 :PNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 20 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1b8qA 84 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1023 Number of alignments=331 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 3 :LRPRLCHLRKGP 1b8qA 7 :PNVISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 20 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPSTR 1b8qA 84 :ETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1027 Number of alignments=332 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 2 :MLRP 1b8qA 2 :SHMI T0340 6 :RLCHLRKGP 1b8qA 10 :ISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 20 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGP 1b8qA 84 :ETHVVLILRGP Number of specific fragments extracted= 5 number of extra gaps= 0 total=1032 Number of alignments=333 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 14 :LFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLI Number of specific fragments extracted= 2 number of extra gaps= 0 total=1034 Number of alignments=334 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 8 :CHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 13 :RLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1036 Number of alignments=335 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 14 :LFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1038 Number of alignments=336 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0340 2 :MLRPRLCHLR 1b8qA 6 :EPNVISVRLF T0340 12 :KGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1b8qA 17 :RKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTR 1b8qA 52 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1041 Number of alignments=337 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1i92A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1i92A expands to /projects/compbio/data/pdb/1i92.pdb.gz 1i92A:Skipped atom 533, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 543, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 545, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 547, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 549, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 551, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 553, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 555, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 557, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 559, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 561, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 563, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 565, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 567, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 569, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 571, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 573, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 575, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 577, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 579, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 581, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 583, because occupancy 0.500 <= existing 0.500 in 1i92A # T0340 read from 1i92A/merged-local-a2m # 1i92A read from 1i92A/merged-local-a2m # adding 1i92A to template set # found chain 1i92A in template set Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPS 1i92A 85 :AVRLLVVDPE Number of specific fragments extracted= 2 number of extra gaps= 1 total=1043 Number of alignments=338 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPS 1i92A 85 :AVRLLVVDPE Number of specific fragments extracted= 2 number of extra gaps= 1 total=1045 Number of alignments=339 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 11 :LPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPS 1i92A 85 :AVRLLVVDPE Number of specific fragments extracted= 2 number of extra gaps= 1 total=1047 Number of alignments=340 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPS 1i92A 85 :AVRLLVVDPE Number of specific fragments extracted= 2 number of extra gaps= 1 total=1049 Number of alignments=341 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPS 1i92A 85 :AVRLLVVDPE Number of specific fragments extracted= 2 number of extra gaps= 1 total=1051 Number of alignments=342 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1i92A)G9 Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPS 1i92A 85 :AVRLLVVDPE T0340 88 :TR 1i92A 97 :TR Number of specific fragments extracted= 3 number of extra gaps= 1 total=1054 Number of alignments=343 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1i92A)G9 Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPS 1i92A 85 :AVRLLVVDPE T0340 89 :R 1i92A 97 :T Number of specific fragments extracted= 3 number of extra gaps= 1 total=1057 Number of alignments=344 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGP 1i92A 85 :AVRLLVVDP Number of specific fragments extracted= 2 number of extra gaps= 1 total=1059 Number of alignments=345 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPS 1i92A 85 :AVRLLVVDPE Number of specific fragments extracted= 2 number of extra gaps= 1 total=1061 Number of alignments=346 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1i92A)G9 Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGP 1i92A 85 :AVRLLVVDP T0340 87 :ST 1i92A 96 :DT Number of specific fragments extracted= 3 number of extra gaps= 1 total=1064 Number of alignments=347 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1i92A)G9 Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPSTRL 1i92A 85 :AVRLLVVDPEQDT Number of specific fragments extracted= 2 number of extra gaps= 1 total=1066 Number of alignments=348 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVV 1i92A 85 :AVRLLVV Number of specific fragments extracted= 2 number of extra gaps= 1 total=1068 Number of alignments=349 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGP 1i92A 85 :AVRLLVVDP Number of specific fragments extracted= 2 number of extra gaps= 1 total=1070 Number of alignments=350 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)M2 because first residue in template chain is (1i92A)G9 Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPSTRL 1i92A 85 :AVRLLVVDPEQDT Number of specific fragments extracted= 2 number of extra gaps= 1 total=1072 Number of alignments=351 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0340)E76 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0340)D77 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1i92A 11 :LPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0340 78 :EARLLVVGPSTRL 1i92A 85 :AVRLLVVDPEQDT Number of specific fragments extracted= 2 number of extra gaps= 1 total=1074 Number of alignments=352 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 2fneA/merged-local-a2m # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1077 Number of alignments=353 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD Number of specific fragments extracted= 3 number of extra gaps= 0 total=1080 Number of alignments=354 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1083 Number of alignments=355 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1086 Number of alignments=356 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0340 8 :CHLRKGPQGYGFNLHSDKS 2fneA 1960 :ITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1089 Number of alignments=357 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0340 6 :RLCHLRKGPQGYGFNLHSDKS 2fneA 1958 :KSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1092 Number of alignments=358 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGY T0340 26 :SRPGQYIRSVDPGSPAARSG 2fneA 1982 :GDLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD Number of specific fragments extracted= 3 number of extra gaps= 0 total=1095 Number of alignments=359 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGY T0340 26 :SRPGQYIRSVDPGSPAARSG 2fneA 1982 :GDLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD Number of specific fragments extracted= 3 number of extra gaps= 0 total=1098 Number of alignments=360 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGY T0340 26 :SRPGQYIRSVDPGSPAARSG 2fneA 1982 :GDLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD T0340 88 :TR 2fneA 2046 :TS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1102 Number of alignments=361 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGY T0340 26 :SRPGQYIRSVDPGSPAARSG 2fneA 1982 :GDLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1105 Number of alignments=362 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1108 Number of alignments=363 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1111 Number of alignments=364 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSS T0340 87 :STR 2fneA 2045 :ETS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1115 Number of alignments=365 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1118 Number of alignments=366 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1121 Number of alignments=367 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 2fneA 1956 :QCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1124 Number of alignments=368 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1127 Number of alignments=369 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0340)M2 because first residue in template chain is (2fneA)M1954 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0340 27 :RPGQYIRSVDPGSPAARSG 2fneA 1983 :DLPIYVKTVFAKGAASEDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 2fneA 2003 :LKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1130 Number of alignments=370 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n99A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1n99A/merged-local-a2m # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGP 1n99A 113 :REVILCKDQ T0340 15 :QGYGFNLHSDKS 1n99A 123 :GKIGLRLKSIDN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1n99A 135 :GIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA T0340 76 :EDEARL 1n99A 183 :GEKITM T0340 84 :VGPSTRL 1n99A 191 :RDRPFER Number of specific fragments extracted= 5 number of extra gaps= 1 total=1135 Number of alignments=371 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGP 1n99A 113 :REVILCKDQ T0340 15 :QGYGFNLHSDKS 1n99A 123 :GKIGLRLKSIDN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1n99A 135 :GIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA T0340 76 :EDEARL 1n99A 183 :GEKITM T0340 84 :VGPS 1n99A 191 :RDRP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1140 Number of alignments=372 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQG 1n99A 113 :REVILCKDQDG T0340 17 :YGFNLHSD 1n99A 125 :IGLRLKSI T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1n99A 133 :DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA T0340 76 :EDEARL 1n99A 183 :GEKITM T0340 84 :VGPS 1n99A 191 :RDRP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1145 Number of alignments=373 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQG 1n99A 113 :REVILCKDQDG T0340 17 :YGFNLHSD 1n99A 125 :IGLRLKSI T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1n99A 133 :DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA T0340 76 :EDEARL 1n99A 183 :GEKITM T0340 84 :VGPS 1n99A 191 :RDRP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1150 Number of alignments=374 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQG 1n99A 113 :REVILCKDQDG T0340 17 :YGFNLHSD 1n99A 125 :IGLRLKSI T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1n99A 133 :DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA T0340 76 :EDEARL 1n99A 183 :GEKITM T0340 84 :VGPST 1n99A 191 :RDRPF Number of specific fragments extracted= 5 number of extra gaps= 1 total=1155 Number of alignments=375 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQG 1n99A 113 :REVILCKDQDG T0340 17 :YGFNLHSD 1n99A 125 :IGLRLKSI T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1n99A 133 :DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA T0340 76 :EDEARL 1n99A 183 :GEKITM T0340 84 :VGPS 1n99A 191 :RDRP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1160 Number of alignments=376 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQG 1n99A 113 :REVILCKDQDG T0340 17 :YGFNLHSD 1n99A 125 :IGLRLKSI T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1n99A 133 :DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA T0340 76 :EDEARL 1n99A 183 :GEKITM T0340 84 :VGP 1n99A 191 :RDR Number of specific fragments extracted= 5 number of extra gaps= 1 total=1165 Number of alignments=377 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQG 1n99A 113 :REVILCKDQDG T0340 17 :YGFNLHSD 1n99A 125 :IGLRLKSI T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1n99A 133 :DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA T0340 76 :EDEARL 1n99A 183 :GEKITM T0340 84 :VGPS 1n99A 191 :RDRP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1170 Number of alignments=378 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQG 1n99A 113 :REVILCKDQDG T0340 17 :YGFNLHSD 1n99A 125 :IGLRLKSI T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1n99A 133 :DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA T0340 76 :EDEARL 1n99A 183 :GEKITM T0340 84 :VGPST 1n99A 191 :RDRPF Number of specific fragments extracted= 5 number of extra gaps= 1 total=1175 Number of alignments=379 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQG 1n99A 113 :REVILCKDQDG T0340 17 :YGFNLHSD 1n99A 125 :IGLRLKSI T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1n99A 133 :DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA T0340 76 :EDEARL 1n99A 183 :GEKITM T0340 84 :VGPS 1n99A 191 :RDRP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1180 Number of alignments=380 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 1n99A 115 :VILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM Number of specific fragments extracted= 1 number of extra gaps= 1 total=1181 Number of alignments=381 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 1n99A 115 :VILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM T0340 85 :GP 1n99A 191 :RD Number of specific fragments extracted= 2 number of extra gaps= 1 total=1183 Number of alignments=382 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQGY 1n99A 113 :REVILCKDQDGK T0340 19 :FNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 1n99A 125 :IGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM T0340 85 :GPS 1n99A 191 :RDR Number of specific fragments extracted= 3 number of extra gaps= 1 total=1186 Number of alignments=383 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0340)P5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0340 6 :RLCHLRKGPQG 1n99A 113 :REVILCKDQDG T0340 19 :FNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 1n99A 125 :IGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM T0340 85 :GP 1n99A 191 :RD Number of specific fragments extracted= 3 number of extra gaps= 1 total=1189 Number of alignments=384 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2bygA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2bygA expands to /projects/compbio/data/pdb/2byg.pdb.gz 2bygA:# T0340 read from 2bygA/merged-local-a2m # 2bygA read from 2bygA/merged-local-a2m # adding 2bygA to template set # found chain 2bygA in template set T0340 1 :SMLRPRLCHLRKGPQGYGFNLHSDK 2bygA 187 :QSMTVVEIKLFKGPKGLGFSIAGGV T0340 26 :SRPGQYIRSVDPGSPAARSG 2bygA 218 :GDNSIYVTKIIDGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2bygA 239 :LQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1192 Number of alignments=385 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDK 2bygA 189 :MTVVEIKLFKGPKGLGFSIAGGV T0340 26 :SRPGQYIRSVDPGSPAARSG 2bygA 218 :GDNSIYVTKIIDGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2bygA 239 :LQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1195 Number of alignments=386 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0340 1 :SMLRPRLCHLRKGPQGYGFNLHSDKS 2bygA 187 :QSMTVVEIKLFKGPKGLGFSIAGGVG T0340 27 :RPGQYIRSVDPGSPAARSG 2bygA 219 :DNSIYVTKIIDGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2bygA 239 :LQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1198 Number of alignments=387 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 2bygA 190 :TVVEIKLFKGPKGLGFSIAGGVG T0340 27 :RPGQYIRSVDPGSPAARSG 2bygA 219 :DNSIYVTKIIDGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2bygA 239 :LQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1201 Number of alignments=388 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0340 7 :LCHLRKGPQGYGFNLHSDKS 2bygA 193 :EIKLFKGPKGLGFSIAGGVG T0340 27 :RPGQYIRSVDPGSPAARSG 2bygA 219 :DNSIYVTKIIDGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 2bygA 239 :LQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1204 Number of alignments=389 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0340 6 :RLCHLRKGPQGYGFNLHSDKS 2bygA 192 :VEIKLFKGPKGLGFSIAGGVG T0340 27 :RPGQYIRSVDPGSPAARSG 2bygA 219 :DNSIYVTKIIDGGAAQKDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 2bygA 239 :LQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1207 Number of alignments=390 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1v5lA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1v5lA expands to /projects/compbio/data/pdb/1v5l.pdb.gz 1v5lA:# T0340 read from 1v5lA/merged-local-a2m # 1v5lA read from 1v5lA/merged-local-a2m # adding 1v5lA to template set # found chain 1v5lA in template set T0340 8 :CHL 1v5lA 9 :VVL T0340 12 :KGPQGYGFNLHSDKS 1v5lA 12 :PGPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1210 Number of alignments=391 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 7 :LCHL 1v5lA 8 :NVVL T0340 12 :KGPQGYGFNLHSDKS 1v5lA 12 :PGPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1213 Number of alignments=392 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 9 :HLRKGPQGYGFNLHSDKS 1v5lA 9 :VVLPGPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1215 Number of alignments=393 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 10 :LRKGPQGYGFNLHSDKS 1v5lA 10 :VLPGPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1217 Number of alignments=394 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 9 :HLRKGPQGYGFNLHSDKSRP 1v5lA 9 :VVLPGPAPWGFRLSGGIDFN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1v5lA 30 :PLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1219 Number of alignments=395 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 10 :LRKGPQGYGFNLHSDKSRP 1v5lA 10 :VLPGPAPWGFRLSGGIDFN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1v5lA 30 :PLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1221 Number of alignments=396 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRP 1v5lA 2 :SSGSSGNVVLPGPAPWGFRLSGGIDFN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1v5lA 30 :PLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1223 Number of alignments=397 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 3 :LRPRLCHLR 1v5lA 4 :GSSGNVVLP T0340 13 :GPQGYGFNLHSDKSRP 1v5lA 13 :GPAPWGFRLSGGIDFN T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1v5lA 30 :PLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE T0340 88 :TR 1v5lA 94 :PQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=1227 Number of alignments=398 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 9 :HLRKGPQGYGFNLHSDKS 1v5lA 9 :VVLPGPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1229 Number of alignments=399 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 10 :LRKGPQGYGFNLHSDKS 1v5lA 10 :VLPGPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1231 Number of alignments=400 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKS 1v5lA 3 :SGSSGNVVLPGPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRA T0340 87 :S 1v5lA 93 :S Number of specific fragments extracted= 3 number of extra gaps= 0 total=1234 Number of alignments=401 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 8 :CHLR 1v5lA 9 :VVLP T0340 13 :GPQGYGFNLHSDKS 1v5lA 13 :GPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1237 Number of alignments=402 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 9 :HLRKGPQGYGFNLHSDKS 1v5lA 9 :VVLPGPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKID Number of specific fragments extracted= 2 number of extra gaps= 0 total=1239 Number of alignments=403 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 11 :RKGPQGYGFNLHSDKS 1v5lA 11 :LPGPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1241 Number of alignments=404 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 1v5lA 10 :VLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET Number of specific fragments extracted= 1 number of extra gaps= 0 total=1242 Number of alignments=405 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0340 12 :KGPQGYGFNLHSDKS 1v5lA 12 :PGPAPWGFRLSGGID T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 1v5lA 28 :NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET Number of specific fragments extracted= 2 number of extra gaps= 0 total=1244 Number of alignments=406 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 2f5yA/merged-local-a2m # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHSDK 2f5yA 16 :YRQITIPRGKDGFGFTICCDS T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 37 :PVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1247 Number of alignments=407 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHSDK 2f5yA 16 :YRQITIPRGKDGFGFTICCDS T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 37 :PVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 2 total=1250 Number of alignments=408 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHSD 2f5yA 16 :YRQITIPRGKDGFGFTICCD T0340 28 :PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 36 :SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1253 Number of alignments=409 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHSD 2f5yA 16 :YRQITIPRGKDGFGFTICCD T0340 28 :PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 36 :SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 2 total=1256 Number of alignments=410 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L7 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 8 :CHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 16 :YRQITIPRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVG 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWR Number of specific fragments extracted= 2 number of extra gaps= 2 total=1258 Number of alignments=411 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 17 :RQITIPRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVG 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWR Number of specific fragments extracted= 2 number of extra gaps= 1 total=1260 Number of alignments=412 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1263 Number of alignments=413 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1266 Number of alignments=414 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0340)S87 because last residue in template chain is (2f5yA)V95 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1269 Number of alignments=415 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0340)S87 because last residue in template chain is (2f5yA)V95 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1272 Number of alignments=416 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVG 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWR Number of specific fragments extracted= 3 number of extra gaps= 1 total=1275 Number of alignments=417 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVG 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWR Number of specific fragments extracted= 3 number of extra gaps= 1 total=1278 Number of alignments=418 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1281 Number of alignments=419 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1284 Number of alignments=420 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVV 2f5yA 71 :WKCVELAHEIRSCPSEIILLVW Number of specific fragments extracted= 3 number of extra gaps= 2 total=1287 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVG 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWR Number of specific fragments extracted= 3 number of extra gaps= 2 total=1290 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1293 Number of alignments=421 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0340)L3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0340)R4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0340)E61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0340)G62 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0340 5 :PRLCHLRKGPQGYGFNLHS 2f5yA 16 :YRQITIPRGKDGFGFTICC T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV 2f5yA 35 :DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPV T0340 63 :LRHAEVVASIKAREDEARLLVVGP 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1296 Number of alignments=422 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1iu0A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1iu0A expands to /projects/compbio/data/pdb/1iu0.pdb.gz 1iu0A:# T0340 read from 1iu0A/merged-local-a2m # 1iu0A read from 1iu0A/merged-local-a2m # adding 1iu0A to template set # found chain 1iu0A in template set Warning: unaligning (T0340)L3 because first residue in template chain is (1iu0A)M1 Warning: unaligning (T0340)P86 because last residue in template chain is (1iu0A)R91 T0340 4 :RPRLCHLRKGPQGYGFNLHSDK 1iu0A 2 :EYEEITLERGNSGLGFSIAGGT T0340 26 :SRPGQYIRSVDPGSPAARSG 1iu0A 30 :DDPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1iu0A 51 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1299 Number of alignments=423 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDK 1iu0A 2 :EYEEITLERGNSGLGFSIAGGT T0340 26 :SRPGQYIRSVDPGSPAARSG 1iu0A 30 :DDPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1iu0A 51 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1302 Number of alignments=424 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set Warning: unaligning (T0340)L3 because first residue in template chain is (1iu0A)M1 Warning: unaligning (T0340)P86 because last residue in template chain is (1iu0A)R91 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1iu0A 2 :EYEEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1iu0A 31 :DPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1iu0A 51 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1305 Number of alignments=425 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1iu0A 2 :EYEEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1iu0A 31 :DPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1iu0A 51 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1308 Number of alignments=426 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1iu0A 2 :EYEEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1iu0A 31 :DPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1iu0A 51 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVM Number of specific fragments extracted= 3 number of extra gaps= 0 total=1311 Number of alignments=427 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set Warning: unaligning (T0340)P86 because last residue in template chain is (1iu0A)R91 T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1iu0A 3 :YEEITLERGNSGLGFSIAGGTD T0340 27 :RPGQYIRSVDPGSPAARSG 1iu0A 31 :DPSIFITKIIPGGAAAQDG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1iu0A 51 :LRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1314 Number of alignments=428 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1l6oA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1l6oA expands to /projects/compbio/data/pdb/1l6o.pdb.gz 1l6oA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0340 read from 1l6oA/merged-local-a2m # 1l6oA read from 1l6oA/merged-local-a2m # adding 1l6oA to template set # found chain 1l6oA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)K12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)S26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LR 1l6oA 257 :LN T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 11 total=1327 Number of alignments=429 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)K12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)S26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0340)P86 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0340)S87 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LR 1l6oA 257 :LN T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1340 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)S26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1353 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)S26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1366 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0340)P86 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0340)S87 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 26 :S 1l6oA 277 :G T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 13 total=1380 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0340)P86 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0340)S87 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 T0340 6 :RL 1l6oA 253 :IT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 26 :S 1l6oA 277 :G T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 13 total=1394 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0340)P86 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0340)S87 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0340)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0340)R89 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 26 :S 1l6oA 277 :G T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 13 total=1408 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0340)P86 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0340)S87 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0340)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0340)R89 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHS 1l6oA 269 :IVG T0340 24 :DKS 1l6oA 275 :ERG T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 12 total=1422 Number of alignments=430 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)S26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1435 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)S26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 T0340 6 :RL 1l6oA 253 :IT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1448 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)S26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0340)P86 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0340)S87 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0340)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0340)R89 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 13 total=1461 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0340)P86 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0340)S87 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0340)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0340)R89 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHS 1l6oA 269 :IVG T0340 24 :DKS 1l6oA 275 :ERG T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :R 1l6oA 327 :I T0340 76 :EDEAR 1l6oA 331 :PGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 12 total=1475 Number of alignments=431 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)S26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL Number of specific fragments extracted= 8 number of extra gaps= 9 total=1483 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)K12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)S26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 T0340 11 :R 1l6oA 259 :M T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :RE 1l6oA 327 :IV Number of specific fragments extracted= 10 number of extra gaps= 9 total=1493 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)K25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0340)S26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0340)P86 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0340)S87 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0340)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0340)R89 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHSD 1l6oA 269 :IVGQ T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 75 :REDEAR 1l6oA 330 :KPGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 12 number of extra gaps= 13 total=1505 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0340)G13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0340)P14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0340)Y17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0340)F19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0340)N20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0340)R27 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0340)G29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0340)A41 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0340)A42 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0340)N56 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0340)G57 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0340)N59 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0340)V60 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0340)G62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0340)R64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0340)K73 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0340)L81 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0340)L82 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0340)V83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0340)V84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0340)P86 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0340)S87 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0340)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0340)R89 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 T0340 5 :PRL 1l6oA 252 :IIT T0340 10 :LRK 1l6oA 257 :LNM T0340 18 :G 1l6oA 266 :G T0340 21 :LHS 1l6oA 269 :IVG T0340 25 :KS 1l6oA 275 :ER T0340 30 :QYIRSVDPGSP 1l6oA 281 :IYIGSIMKGGA T0340 43 :RSG 1l6oA 294 :ADG T0340 46 :LRAQDRLIEV 1l6oA 298 :IEPGDMLLQV T0340 58 :Q 1l6oA 310 :I T0340 61 :E 1l6oA 313 :E T0340 65 :HAEVVASI 1l6oA 317 :NDDAVRVL T0340 74 :AREDEAR 1l6oA 329 :HKPGPIV T0340 85 :G 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 13 total=1518 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qauA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1qauA/merged-local-a2m # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0340 5 :PRLCHLRKG 1qauA 15 :VISVRLFKR T0340 14 :PQGYGFNLHSDKSRPGQYIRSVDPGSPAARS 1qauA 25 :VGGLGFLVKERVSKPPVIISDLIRGGAAEQS T0340 45 :GLRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1qauA 57 :LIQAGDIILAVNDRPLVDLSYDSALEVLRGIA T0340 77 :DEARLLVVGP 1qauA 91 :THVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1522 Number of alignments=432 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1qauA)N14 T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGP 1qauA 90 :ETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1526 Number of alignments=433 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1qauA 90 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1530 Number of alignments=434 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1qauA)N14 T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1533 Number of alignments=435 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1536 Number of alignments=436 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1qauA)N14 T0340 5 :PRLCHLRKGPQ 1qauA 15 :VISVRLFKRKV T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 27 :GLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1539 Number of alignments=437 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0340 5 :PRLCHLRKGPQ 1qauA 15 :VISVRLFKRKV T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 27 :GLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1542 Number of alignments=438 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1qauA)N14 T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1qauA 90 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1546 Number of alignments=439 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGP 1qauA 90 :ETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1550 Number of alignments=440 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1qauA)N14 T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1qauA 90 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1554 Number of alignments=441 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1qauA)N14 T0340 5 :PRLCHLRKGPQ 1qauA 15 :VISVRLFKRKV T0340 16 :GYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 27 :GLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1qauA 90 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1558 Number of alignments=442 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1qauA)N14 T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGP 1qauA 90 :ETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1562 Number of alignments=443 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPS 1qauA 90 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1566 Number of alignments=444 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1qauA)N14 T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPSTR 1qauA 90 :ETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1570 Number of alignments=445 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1qauA)N14 T0340 5 :PRLCHLRKGP 1qauA 15 :VISVRLFKRK T0340 15 :QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 26 :GGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGI T0340 76 :EDEARLLVVGPSTR 1qauA 90 :ETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1574 Number of alignments=446 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 20 :LFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLI Number of specific fragments extracted= 2 number of extra gaps= 0 total=1576 Number of alignments=447 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0340 9 :HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 20 :LFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1578 Number of alignments=448 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0340 5 :PRLCHLR 1qauA 15 :VISVRLF T0340 12 :KGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 23 :RKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKA 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRG T0340 75 :REDEARLLVVGPST 1qauA 89 :SETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1582 Number of alignments=449 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1qauA)N14 T0340 5 :PRLCHLR 1qauA 15 :VISVRLF T0340 12 :KGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1qauA 23 :RKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKA 1qauA 58 :IQAGDIILAVNDRPLVDLSYDSALEVLRG T0340 75 :REDEARLLVVGPST 1qauA 89 :SETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1586 Number of alignments=450 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1be9A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1be9A expands to /projects/compbio/data/pdb/1be9.pdb.gz 1be9A:# T0340 read from 1be9A/merged-local-a2m # 1be9A read from 1be9A/merged-local-a2m # adding 1be9A to template set # found chain 1be9A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1588 Number of alignments=451 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1590 Number of alignments=452 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1592 Number of alignments=453 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1594 Number of alignments=454 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARS 1be9A 310 :EPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLS T0340 45 :GLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1be9A 352 :ELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1596 Number of alignments=455 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1598 Number of alignments=456 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1600 Number of alignments=457 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1602 Number of alignments=458 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1604 Number of alignments=459 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1606 Number of alignments=460 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1608 Number of alignments=461 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1610 Number of alignments=462 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1612 Number of alignments=463 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=1614 Number of alignments=464 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 309 :REPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1616 Number of alignments=465 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1618 Number of alignments=466 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1be9A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1620 Number of alignments=467 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1gq5A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1gq5A expands to /projects/compbio/data/pdb/1gq5.pdb.gz 1gq5A:# T0340 read from 1gq5A/merged-local-a2m # 1gq5A read from 1gq5A/merged-local-a2m # adding 1gq5A to template set # found chain 1gq5A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1gq5A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1621 Number of alignments=468 # 1gq5A read from 1gq5A/merged-local-a2m # found chain 1gq5A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1gq5A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1622 Number of alignments=469 # 1gq5A read from 1gq5A/merged-local-a2m # found chain 1gq5A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1gq5A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1623 Number of alignments=470 # 1gq5A read from 1gq5A/merged-local-a2m # found chain 1gq5A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1gq5A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1624 Number of alignments=471 # 1gq5A read from 1gq5A/merged-local-a2m # found chain 1gq5A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1gq5A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVV Number of specific fragments extracted= 1 number of extra gaps= 0 total=1625 Number of alignments=472 # 1gq5A read from 1gq5A/merged-local-a2m # found chain 1gq5A in template set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1gq5A 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1626 Number of alignments=473 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwaA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1kwaA expands to /projects/compbio/data/pdb/1kwa.pdb.gz 1kwaA:# T0340 read from 1kwaA/merged-local-a2m # 1kwaA read from 1kwaA/merged-local-a2m # adding 1kwaA to template set # found chain 1kwaA in template set T0340 5 :PRLCHLRK 1kwaA 488 :SRLVQFQK T0340 13 :GPQGYGFNLHSD 1kwaA 497 :TDEPMGITLKMN T0340 26 :SRPGQYIRSVDPGSPAARSG 1kwaA 509 :ELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 4 number of extra gaps= 0 total=1630 Number of alignments=474 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kwaA)R487 T0340 5 :PRLCHLRKGPQ 1kwaA 488 :SRLVQFQKNTD T0340 16 :GYGFNLHSDKSR 1kwaA 500 :PMGITLKMNELN T0340 29 :GQYIRSVDPGSPAARSG 1kwaA 512 :HCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1634 Number of alignments=475 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 5 :PRLCHLRKGPQ 1kwaA 488 :SRLVQFQKNTD T0340 16 :GYGFNLHSDKSR 1kwaA 500 :PMGITLKMNELN T0340 29 :GQYIRSVDPGSPAARSG 1kwaA 512 :HCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY Number of specific fragments extracted= 4 number of extra gaps= 0 total=1638 Number of alignments=476 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 6 :RLCHLRKG 1kwaA 489 :RLVQFQKN T0340 14 :PQGYGFNLHSDKSR 1kwaA 498 :DEPMGITLKMNELN T0340 29 :GQYIRSVDPGSPAARSG 1kwaA 512 :HCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1642 Number of alignments=477 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 6 :RLCHLRKG 1kwaA 489 :RLVQFQKN T0340 14 :PQGYGFNLHSDKSR 1kwaA 498 :DEPMGITLKMNELN T0340 29 :GQYIRSVDPGSPAARSG 1kwaA 512 :HCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY Number of specific fragments extracted= 4 number of extra gaps= 0 total=1646 Number of alignments=478 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 5 :PRLCHLRKGPQGYGFNLHSD 1kwaA 489 :RLVQFQKNTDEPMGITLKMN T0340 26 :SRPGQYIRSVDPGSPAARSG 1kwaA 509 :ELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1649 Number of alignments=479 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 6 :RLCHLRKGPQGYGFNLHSD 1kwaA 490 :LVQFQKNTDEPMGITLKMN T0340 26 :SRPGQYIRSVDPGSPAARSG 1kwaA 509 :ELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1652 Number of alignments=480 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 6 :RLCHLRKGPQ 1kwaA 489 :RLVQFQKNTD T0340 16 :GYGFNLHSD 1kwaA 500 :PMGITLKMN T0340 26 :SRPGQYIRSVDPGSPAARSG 1kwaA 509 :ELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1656 Number of alignments=481 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 6 :RLCHLRKGPQ 1kwaA 489 :RLVQFQKNTD T0340 16 :GYGFNLHS 1kwaA 500 :PMGITLKM T0340 25 :KSRPGQYIRSVDPGSPAARSG 1kwaA 508 :NELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1660 Number of alignments=482 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kwaA)R487 T0340 5 :PRLCHLRKGPQ 1kwaA 488 :SRLVQFQKNTD T0340 16 :GYGFNLHS 1kwaA 500 :PMGITLKM T0340 25 :KSRPGQYIRSVDPGSPAARSG 1kwaA 508 :NELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYREF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1664 Number of alignments=483 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kwaA)R487 T0340 5 :PRLCHLRKGPQ 1kwaA 488 :SRLVQFQKNTD T0340 16 :GYGFNLHSD 1kwaA 500 :PMGITLKMN T0340 26 :SRPGQYIRSVDPGSPAARSG 1kwaA 509 :ELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYREF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1668 Number of alignments=484 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 6 :RLCHLRKGPQ 1kwaA 489 :RLVQFQKNTD T0340 16 :GYGFNLHSD 1kwaA 500 :PMGITLKMN T0340 26 :SRPGQYIRSVDPGSPAARSG 1kwaA 509 :ELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1672 Number of alignments=485 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 6 :RLCHLRKGPQ 1kwaA 489 :RLVQFQKNTD T0340 16 :GYGFNLHSD 1kwaA 500 :PMGITLKMN T0340 26 :SRPGQYIRSVDPGSPAARSG 1kwaA 509 :ELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1676 Number of alignments=486 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kwaA)R487 T0340 5 :PRLCHLRKGPQ 1kwaA 488 :SRLVQFQKNTD T0340 16 :GYGFNLHSD 1kwaA 500 :PMGITLKMN T0340 26 :SRPGQYIRSVDPGSPAARSG 1kwaA 509 :ELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYREF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1680 Number of alignments=487 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kwaA)R487 T0340 5 :PRLCHLRKGPQ 1kwaA 488 :SRLVQFQKNTD T0340 16 :GYGFNLHSD 1kwaA 500 :PMGITLKMN T0340 26 :SRPGQYIRSVDPGSPAARSG 1kwaA 509 :ELNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS T0340 88 :TRL 1kwaA 572 :REF Number of specific fragments extracted= 5 number of extra gaps= 0 total=1685 Number of alignments=488 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 28 :PGQYIRSVDPGSPAARSG 1kwaA 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1687 Number of alignments=489 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 13 :GPQGYGFNLHSDK 1kwaA 497 :TDEPMGITLKMNE T0340 27 :RPGQYIRSVDPGSPAARSG 1kwaA 510 :LNHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1690 Number of alignments=490 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kwaA)R487 T0340 5 :PRLCHLRK 1kwaA 488 :SRLVQFQK T0340 13 :GPQGYGFNLHSDKS 1kwaA 497 :TDEPMGITLKMNEL T0340 28 :PGQYIRSVDPGSPAARSG 1kwaA 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYREF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1694 Number of alignments=491 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0340 5 :PRLCHLRK 1kwaA 488 :SRLVQFQK T0340 13 :GPQGYGFNLHSDKS 1kwaA 497 :TDEPMGITLKMNEL T0340 28 :PGQYIRSVDPGSPAARSG 1kwaA 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1kwaA 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYREF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1698 Number of alignments=492 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1te0A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1te0A expands to /projects/compbio/data/pdb/1te0.pdb.gz 1te0A:# T0340 read from 1te0A/merged-local-a2m # 1te0A read from 1te0A/merged-local-a2m # adding 1te0A to template set # found chain 1te0A in template set Warning: unaligning (T0340)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0340)Y17 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0340)N20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0340)H22 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 2 :MLRPRLCHLRKGPQ 1te0A 254 :VIRGYIGIGGREIA T0340 18 :GF 1te0A 270 :HA T0340 26 :SRPGQYI 1te0A 278 :QLQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 62 :GLRHAEVVASIKAREDEARLLVVGPSTRL 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDKQL Number of specific fragments extracted= 8 number of extra gaps= 7 total=1706 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)N20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0340)H22 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 19 :F 1te0A 271 :A T0340 26 :SRPGQYI 1te0A 278 :QLQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 62 :GLRHAEVVASIKAREDEARLLVVGP 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRD Number of specific fragments extracted= 7 number of extra gaps= 6 total=1713 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0340)Y17 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0340)N20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0340)H22 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 4 :RPRLCHLRKGPQ 1te0A 256 :RGYIGIGGREIA T0340 18 :GF 1te0A 270 :HA T0340 26 :SRPGQYI 1te0A 278 :QLQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 62 :GLRHAEVVASIKAREDEARLLVVGPSTRL 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDKQL Number of specific fragments extracted= 8 number of extra gaps= 7 total=1721 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0340)Y17 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0340)N20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0340)H22 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 6 :RLCHLRKGPQ 1te0A 258 :YIGIGGREIA T0340 18 :GF 1te0A 270 :HA T0340 26 :SRPGQYI 1te0A 278 :QLQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 62 :GLRHAEVVASIKAREDEARLLVVGP 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRD Number of specific fragments extracted= 8 number of extra gaps= 7 total=1729 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 29 :GQYI 1te0A 281 :GIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 62 :GLRHAEVVASIKAREDEARLLVV 1te0A 314 :SALETMDQVAEIRPGSVIPVVVM Number of specific fragments extracted= 6 number of extra gaps= 5 total=1735 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0340)H22 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 19 :FN 1te0A 234 :FA T0340 26 :SRPGQYI 1te0A 278 :QLQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 62 :GLRHAEVVASIKAREDEARLLVV 1te0A 314 :SALETMDQVAEIRPGSVIPVVVM Number of specific fragments extracted= 7 number of extra gaps= 6 total=1742 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)S26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 27 :RP 1te0A 278 :QL T0340 29 :GQYI 1te0A 281 :GIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 62 :GL 1te0A 314 :SA Number of specific fragments extracted= 7 number of extra gaps= 6 total=1749 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)S26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 27 :RP 1te0A 278 :QL T0340 29 :GQYI 1te0A 281 :GIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 62 :GL 1te0A 314 :SA T0340 66 :AEVVASIKAR 1te0A 316 :LETMDQVAEI T0340 76 :EDEARLLVVGPS 1te0A 328 :GSVIPVVVMRDD Number of specific fragments extracted= 9 number of extra gaps= 6 total=1758 Number of alignments=493 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)S26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 27 :RP 1te0A 278 :QL T0340 29 :GQYI 1te0A 281 :GIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 64 :RHAEVVASIKAR 1te0A 314 :SALETMDQVAEI T0340 76 :EDEARLLVVGPST 1te0A 328 :GSVIPVVVMRDDK Number of specific fragments extracted= 8 number of extra gaps= 6 total=1766 Number of alignments=494 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0340)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)S26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 27 :RP 1te0A 278 :QL T0340 29 :GQYI 1te0A 281 :GIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 64 :RHAEVVASIKAR 1te0A 314 :SALETMDQVAEI T0340 76 :EDEARLLVVGPS 1te0A 328 :GSVIPVVVMRDD Number of specific fragments extracted= 8 number of extra gaps= 6 total=1774 Number of alignments=495 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)S26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 27 :RPGQYI 1te0A 279 :LQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 64 :RHAEVVASIKAR 1te0A 314 :SALETMDQVAEI T0340 76 :EDEARLLVVGP 1te0A 328 :GSVIPVVVMRD Number of specific fragments extracted= 7 number of extra gaps= 6 total=1781 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)S26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 27 :RPGQYI 1te0A 279 :LQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 62 :G 1te0A 314 :S T0340 65 :HAEVVASIKAR 1te0A 315 :ALETMDQVAEI T0340 76 :EDEARLLVVGP 1te0A 328 :GSVIPVVVMRD Number of specific fragments extracted= 8 number of extra gaps= 6 total=1789 Number of alignments=496 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)S26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)L63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 27 :RPGQYI 1te0A 279 :LQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 64 :RHAEVVASIKAR 1te0A 314 :SALETMDQVAEI T0340 76 :EDEARLLVVGPSTR 1te0A 328 :GSVIPVVVMRDDKQ Number of specific fragments extracted= 7 number of extra gaps= 6 total=1796 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)P14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)S26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 27 :RPGQYI 1te0A 279 :LQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 64 :RHAEVVASIKAR 1te0A 314 :SALETMDQVAEI T0340 76 :EDEARLLVVGPST 1te0A 328 :GSVIPVVVMRDDK Number of specific fragments extracted= 7 number of extra gaps= 6 total=1803 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)H22 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 T0340 26 :SRPGQYI 1te0A 278 :QLQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP Number of specific fragments extracted= 5 number of extra gaps= 5 total=1808 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)L21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0340)H22 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 26 :SRPGQYI 1te0A 278 :QLQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 62 :GL 1te0A 314 :SA T0340 64 :RHAEVVAS 1te0A 318 :TMDQVAEI T0340 75 :REDEARLLVVGP 1te0A 326 :RPGSVIPVVVMR Number of specific fragments extracted= 8 number of extra gaps= 6 total=1816 Number of alignments=497 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)P14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0340)Q15 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 26 :SRPGQYI 1te0A 278 :QLQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 64 :RHAEVVASIKA 1te0A 314 :SALETMDQVAE T0340 75 :REDEARLLVVGPSTR 1te0A 326 :RPGSVIPVVVMRDDK Number of specific fragments extracted= 7 number of extra gaps= 6 total=1823 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0340)D24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0340)K25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0340)R33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0340)S34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0340)G38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0340)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0340)A42 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0340)R43 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0340)G45 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0340)D50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0340)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0340)V60 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0340)E61 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0340 26 :SRPGQYI 1te0A 278 :QLQGIVV T0340 35 :VDP 1te0A 287 :VSP T0340 40 :PA 1te0A 292 :PA T0340 46 :LRAQ 1te0A 298 :IQVN T0340 52 :LIEVNGQN 1te0A 304 :IISVDNKP T0340 64 :RHAEVVASIKA 1te0A 314 :SALETMDQVAE T0340 75 :REDEARLLVVGPST 1te0A 327 :PGSVIPVVVMRDDK Number of specific fragments extracted= 7 number of extra gaps= 6 total=1830 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwaB/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1kwaB expands to /projects/compbio/data/pdb/1kwa.pdb.gz 1kwaB:# T0340 read from 1kwaB/merged-local-a2m # 1kwaB read from 1kwaB/merged-local-a2m # adding 1kwaB to template set # found chain 1kwaB in template set Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)R27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 5 :PRLCHLRK 1kwaB 488 :SRLVQFQK T0340 13 :GPQGYGFNLH 1kwaB 497 :TDEPMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 4 number of extra gaps= 1 total=1834 Number of alignments=498 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)D24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 5 :PRLCHLRKGPQGYGFNLH 1kwaB 489 :RLVQFQKNTDEPMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 3 number of extra gaps= 1 total=1837 Number of alignments=499 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)D24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 5 :PRLCHLRKGPQGYGFNLH 1kwaB 489 :RLVQFQKNTDEPMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 3 number of extra gaps= 1 total=1840 Number of alignments=500 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)R27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 6 :RLCHLRKGPQ 1kwaB 489 :RLVQFQKNTD T0340 16 :GYGFNLH 1kwaB 500 :PMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1844 Number of alignments=501 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)R27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 6 :RLCHLRKGPQ 1kwaB 489 :RLVQFQKNTD T0340 16 :GYGFNLH 1kwaB 500 :PMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 4 number of extra gaps= 1 total=1848 Number of alignments=502 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)R27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 5 :PRLCHLRKGPQ 1kwaB 488 :SRLVQFQKNTD T0340 16 :GYGFNLH 1kwaB 500 :PMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYREF Number of specific fragments extracted= 4 number of extra gaps= 1 total=1852 Number of alignments=503 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)R27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 5 :PRLCHLRKGPQ 1kwaB 488 :SRLVQFQKNTD T0340 16 :GYGFNLH 1kwaB 500 :PMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY Number of specific fragments extracted= 4 number of extra gaps= 1 total=1856 Number of alignments=504 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)R27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 6 :RLCHLRKGPQ 1kwaB 489 :RLVQFQKNTD T0340 16 :GYGFNLH 1kwaB 500 :PMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 4 number of extra gaps= 1 total=1860 Number of alignments=505 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)D24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 6 :RLCHLRKGPQ 1kwaB 489 :RLVQFQKNTD T0340 16 :GYGFNLH 1kwaB 500 :PMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 4 number of extra gaps= 1 total=1864 Number of alignments=506 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)D24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 5 :PRLCHLRKGPQ 1kwaB 488 :SRLVQFQKNTD T0340 16 :GYGFNLH 1kwaB 500 :PMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS T0340 88 :TRL 1kwaB 572 :REF Number of specific fragments extracted= 5 number of extra gaps= 1 total=1869 Number of alignments=507 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)R4 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)R27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 5 :PRLCHLRKGPQ 1kwaB 488 :SRLVQFQKNTD T0340 16 :GYGFNLH 1kwaB 500 :PMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 4 number of extra gaps= 1 total=1873 Number of alignments=508 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1875 Number of alignments=509 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)R27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 14 :PQGYGFNLH 1kwaB 498 :DEPMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVP Number of specific fragments extracted= 3 number of extra gaps= 1 total=1878 Number of alignments=510 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)R27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 5 :PRLCHLRKG 1kwaB 488 :SRLVQFQKN T0340 14 :PQGYGFNLH 1kwaB 498 :DEPMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY Number of specific fragments extracted= 4 number of extra gaps= 1 total=1882 Number of alignments=511 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0340)S23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0340)D24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0340 5 :PRLCHLRK 1kwaB 488 :SRLVQFQK T0340 13 :GPQGYGFNLH 1kwaB 497 :TDEPMGITLK T0340 28 :PGQYIRSVDPGSPAARSG 1kwaB 511 :NHCIVARIMHGGMIHRQG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1kwaB 530 :LHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1886 Number of alignments=512 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1nteA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1nteA expands to /projects/compbio/data/pdb/1nte.pdb.gz 1nteA:Skipped atom 107, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 281, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 283, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 285, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 287, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 289, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 291, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 332, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 334, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 336, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 338, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 340, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 373, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 595, because occupancy 0.300 <= existing 0.700 in 1nteA Skipped atom 597, because occupancy 0.300 <= existing 0.700 in 1nteA Skipped atom 599, because occupancy 0.300 <= existing 0.700 in 1nteA Skipped atom 601, because occupancy 0.300 <= existing 0.700 in 1nteA # T0340 read from 1nteA/merged-local-a2m # 1nteA read from 1nteA/merged-local-a2m # adding 1nteA to template set # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 1 :SM 1nteA 192 :GA T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGFNLHSD 1nteA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1nteA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1890 Number of alignments=513 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGFNLHSD 1nteA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nteA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 1 total=1893 Number of alignments=514 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 5 :PRLCHLRKGP 1nteA 196 :PRTITMHKDS T0340 15 :QGYGFNLH 1nteA 207 :GHVGFIFK T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1nteA 215 :NGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1896 Number of alignments=515 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 5 :PRLCHLRKGP 1nteA 196 :PRTITMHKDS T0340 15 :QGYGFNLH 1nteA 207 :GHVGFIFK T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1nteA 215 :NGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 1 total=1899 Number of alignments=516 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 1 :SM 1nteA 192 :GA T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGFNLHSDK 1nteA 209 :VGFIFKNGK T0340 32 :IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1nteA 218 :ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1903 Number of alignments=517 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 2 :M 1nteA 193 :A T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGFNLHSDK 1nteA 209 :VGFIFKNGK T0340 32 :IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1nteA 218 :ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1907 Number of alignments=518 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 1 :SM 1nteA 192 :GA T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGFNLHSD 1nteA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nteA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 1 total=1911 Number of alignments=519 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 1 :SM 1nteA 192 :GA T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGFNLHSD 1nteA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nteA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 1 total=1915 Number of alignments=520 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 1 :SM 1nteA 192 :GA T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGFNLHSDK 1nteA 209 :VGFIFKNGK T0340 32 :IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1nteA 218 :ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1919 Number of alignments=521 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 2 :M 1nteA 193 :A T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGFNLHSDK 1nteA 209 :VGFIFKNGK T0340 32 :IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1nteA 218 :ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1923 Number of alignments=522 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 1 :SM 1nteA 192 :GA T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGFNLHSD 1nteA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nteA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 1 total=1927 Number of alignments=523 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 1 :SM 1nteA 192 :GA T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGFNLHSD 1nteA 209 :VGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1nteA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 1 total=1931 Number of alignments=524 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set T0340 32 :IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1nteA 218 :ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM Number of specific fragments extracted= 1 number of extra gaps= 0 total=1932 Number of alignments=525 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set T0340 6 :RLCHLRKGPQGYGFNLH 1nteA 197 :RTITMHKDSTGHVGFIF T0340 28 :PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1nteA 214 :KNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM Number of specific fragments extracted= 2 number of extra gaps= 0 total=1934 Number of alignments=526 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 1 :SM 1nteA 192 :GA T0340 5 :PRLCHLRKGPQGYGFNLHSDK 1nteA 196 :PRTITMHKDSTGHVGFIFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1nteA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 1 total=1937 Number of alignments=527 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0340)L3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0340)R4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0340 2 :M 1nteA 193 :A T0340 5 :PRLCHLRKGPQG 1nteA 196 :PRTITMHKDSTG T0340 17 :YGF 1nteA 209 :VGF T0340 22 :HSDKS 1nteA 212 :IFKNG T0340 31 :YIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1nteA 217 :KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1942 Number of alignments=528 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 2fcfA/merged-local-a2m # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 T0340 3 :LRPRLCHLRKG 2fcfA 1147 :MQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1946 Number of alignments=529 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 T0340 3 :LRPRLCHLRKG 2fcfA 1147 :MQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI Number of specific fragments extracted= 4 number of extra gaps= 0 total=1950 Number of alignments=530 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 T0340 3 :LRPRLCHLRKG 2fcfA 1147 :MQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI Number of specific fragments extracted= 4 number of extra gaps= 0 total=1954 Number of alignments=531 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 T0340 4 :RPRLCHLRKG 2fcfA 1148 :QPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI Number of specific fragments extracted= 4 number of extra gaps= 0 total=1958 Number of alignments=532 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)Q15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 13 :GP 2fcfA 1168 :GG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQ Number of specific fragments extracted= 3 number of extra gaps= 1 total=1961 Number of alignments=533 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)Q15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 10 :LRKGP 2fcfA 1165 :SIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 3 number of extra gaps= 1 total=1964 Number of alignments=534 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 T0340 1 :SMLRPRLCHLRKG 2fcfA 1145 :QSMQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 4 number of extra gaps= 1 total=1968 Number of alignments=535 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 T0340 3 :LRPRLCHLRKG 2fcfA 1147 :MQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 4 number of extra gaps= 1 total=1972 Number of alignments=536 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 T0340 1 :SMLRPRLCHLRKG 2fcfA 1145 :QSMQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSII T0340 88 :TR 2fcfA 1245 :TR Number of specific fragments extracted= 5 number of extra gaps= 1 total=1977 Number of alignments=537 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 T0340 1 :SMLRPRLCHLRKG 2fcfA 1145 :QSMQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSII T0340 88 :TR 2fcfA 1245 :TR Number of specific fragments extracted= 5 number of extra gaps= 1 total=1982 Number of alignments=538 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 3 :LRPRLCHLRKG 2fcfA 1147 :MQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 4 number of extra gaps= 1 total=1986 Number of alignments=539 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 3 :LRPRLCHLRKG 2fcfA 1147 :MQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=1990 Number of alignments=540 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 1 :SMLRPRLCHLRKG 2fcfA 1145 :QSMQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI T0340 87 :STRL 2fcfA 1244 :STRL Number of specific fragments extracted= 5 number of extra gaps= 1 total=1995 Number of alignments=541 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 1 :SMLRPRLCHLRKG 2fcfA 1145 :QSMQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI T0340 87 :STRL 2fcfA 1244 :STRL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2000 Number of alignments=542 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)Q15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 11 :RKGP 2fcfA 1166 :IVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQ Number of specific fragments extracted= 3 number of extra gaps= 1 total=2003 Number of alignments=543 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)Q15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 9 :HLRKGP 2fcfA 1164 :ISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQ Number of specific fragments extracted= 3 number of extra gaps= 1 total=2006 Number of alignments=544 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 1 :SMLRPRLCHLRKG 2fcfA 1145 :QSMQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI Number of specific fragments extracted= 4 number of extra gaps= 1 total=2010 Number of alignments=545 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0340)P14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0340)K25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0340)S26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0340 3 :LRPRLCHLRKG 2fcfA 1147 :MQPRRVELWRE T0340 16 :GYGFNLHSD 2fcfA 1161 :SLGISIVGG T0340 30 :QYIRSVDPGSPAARSG 2fcfA 1185 :IFIKHVLEDSPAGKNG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 2fcfA 1202 :LKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI Number of specific fragments extracted= 4 number of extra gaps= 1 total=2014 Number of alignments=546 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1tp5A/merged-local-a2m # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2017 Number of alignments=547 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2020 Number of alignments=548 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2023 Number of alignments=549 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGPS 1tp5A 390 :AQYKP Number of specific fragments extracted= 3 number of extra gaps= 1 total=2026 Number of alignments=550 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 310 :EPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VV 1tp5A 390 :AQ Number of specific fragments extracted= 3 number of extra gaps= 1 total=2029 Number of alignments=551 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 310 :EPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VV 1tp5A 390 :AQ Number of specific fragments extracted= 3 number of extra gaps= 1 total=2032 Number of alignments=552 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGPS 1tp5A 390 :AQYKP Number of specific fragments extracted= 3 number of extra gaps= 1 total=2035 Number of alignments=553 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGPS 1tp5A 390 :AQYKP Number of specific fragments extracted= 3 number of extra gaps= 1 total=2038 Number of alignments=554 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVG 1tp5A 390 :AQY Number of specific fragments extracted= 3 number of extra gaps= 1 total=2041 Number of alignments=555 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2044 Number of alignments=556 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2047 Number of alignments=557 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2050 Number of alignments=558 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2053 Number of alignments=559 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2056 Number of alignments=560 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VV 1tp5A 390 :AQ Number of specific fragments extracted= 3 number of extra gaps= 1 total=2059 Number of alignments=561 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVGP 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2062 Number of alignments=562 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVG 1tp5A 390 :AQY Number of specific fragments extracted= 3 number of extra gaps= 1 total=2065 Number of alignments=563 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0340 2 :MLRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 1tp5A 353 :LRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0340 83 :VVG 1tp5A 390 :AQY Number of specific fragments extracted= 3 number of extra gaps= 1 total=2068 Number of alignments=564 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1mfgA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1mfgA/merged-local-a2m # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 3 :LRPRLCHLRKGP 1mfgA 1278 :SMEIRVRVEKDP T0340 16 :GYGFNLHSDK 1mfgA 1290 :ELGFSISGGV T0340 26 :SRPGQYIRSVDPGSPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0340 43 :RSGLRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGP 1mfgA 1365 :IVRE Number of specific fragments extracted= 6 number of extra gaps= 2 total=2074 Number of alignments=565 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 4 :RPRLCHLRKGP 1mfgA 1279 :MEIRVRVEKDP T0340 16 :GYGFNLHSDK 1mfgA 1290 :ELGFSISGGV T0340 26 :SRPGQYIRSVDPGSPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0340 43 :RSGLRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGPS 1mfgA 1365 :IVREV Number of specific fragments extracted= 6 number of extra gaps= 2 total=2080 Number of alignments=566 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 5 :PRLCHLRKGPQ 1mfgA 1280 :EIRVRVEKDPE T0340 17 :YGFNLHSDKS 1mfgA 1291 :LGFSISGGVG T0340 27 :RPGQYIRSVDPGSPA 1mfgA 1310 :DDGIFVTRVQPEGPA T0340 43 :RSGLRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGP 1mfgA 1365 :IVRE Number of specific fragments extracted= 6 number of extra gaps= 2 total=2086 Number of alignments=567 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 5 :PRLCHLRKGPQ 1mfgA 1280 :EIRVRVEKDPE T0340 17 :YGFNLHSDKS 1mfgA 1291 :LGFSISGGVG T0340 27 :RPGQYIRSVDPGSPA 1mfgA 1310 :DDGIFVTRVQPEGPA T0340 43 :RSGLRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGPS 1mfgA 1365 :IVREV Number of specific fragments extracted= 6 number of extra gaps= 2 total=2092 Number of alignments=568 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSR 1mfgA 1279 :MEIRVRVEKDPELGFSISGGVGG T0340 28 :PGQYIRSVDPGSPA 1mfgA 1311 :DGIFVTRVQPEGPA T0340 43 :RSGLRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VV 1mfgA 1365 :IV Number of specific fragments extracted= 5 number of extra gaps= 2 total=2097 Number of alignments=569 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSR 1mfgA 1279 :MEIRVRVEKDPELGFSISGGVGG T0340 28 :PGQYIRSVDPGSPA 1mfgA 1311 :DGIFVTRVQPEGPA T0340 43 :RSGLRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VV 1mfgA 1365 :IV Number of specific fragments extracted= 5 number of extra gaps= 2 total=2102 Number of alignments=570 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 11 :RKGPQGYGFNLHSDK 1mfgA 1285 :VEKDPELGFSISGGV T0340 26 :SRPGQYIRSVDPGSPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0340 44 :SG 1mfgA 1325 :SK T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVG 1mfgA 1365 :IVR Number of specific fragments extracted= 6 number of extra gaps= 2 total=2108 Number of alignments=571 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 8 :CHLRKG 1mfgA 1283 :VRVEKD T0340 15 :QGYGFNLHSDK 1mfgA 1289 :PELGFSISGGV T0340 26 :SRPGQYIRSVDPGSPAA 1mfgA 1309 :DDDGIFVTRVQPEGPAS T0340 45 :G 1mfgA 1326 :K T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVG 1mfgA 1365 :IVR Number of specific fragments extracted= 7 number of extra gaps= 2 total=2115 Number of alignments=572 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 3 :LRPRLCHLRKGP 1mfgA 1278 :SMEIRVRVEKDP T0340 16 :GYGFNLHSDK 1mfgA 1290 :ELGFSISGGV T0340 26 :SRPGQYIRSVDPGSPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0340 44 :SG 1mfgA 1325 :SK T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGPST 1mfgA 1365 :IVREVS Number of specific fragments extracted= 7 number of extra gaps= 2 total=2122 Number of alignments=573 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1mfgA)G1277 Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 Warning: unaligning (T0340)R89 because last residue in template chain is (1mfgA)S1371 T0340 3 :LRPRLCHLRKGPQ 1mfgA 1278 :SMEIRVRVEKDPE T0340 17 :YGFNLHSDK 1mfgA 1291 :LGFSISGGV T0340 26 :SRPGQYIRSVDPGSPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0340 44 :SG 1mfgA 1325 :SK T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGPST 1mfgA 1365 :IVREVS Number of specific fragments extracted= 7 number of extra gaps= 2 total=2129 Number of alignments=574 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)R4 because first residue in template chain is (1mfgA)G1277 Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 5 :PRLCHLRKGPQG 1mfgA 1278 :SMEIRVRVEKDP T0340 17 :YGFNLHSDKS 1mfgA 1291 :LGFSISGGVG T0340 27 :RPGQYIRSVDPGSPAARS 1mfgA 1310 :DDGIFVTRVQPEGPASKL T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGP 1mfgA 1365 :IVRE Number of specific fragments extracted= 6 number of extra gaps= 2 total=2135 Number of alignments=575 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 10 :LRKGPQ 1mfgA 1283 :VRVEKD T0340 16 :GYGFNLHSDKS 1mfgA 1290 :ELGFSISGGVG T0340 27 :RPGQYIRSVDPGSPAAR 1mfgA 1310 :DDGIFVTRVQPEGPASK T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGP 1mfgA 1365 :IVRE Number of specific fragments extracted= 6 number of extra gaps= 2 total=2141 Number of alignments=576 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1mfgA)G1277 Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 3 :LRPRLCHLRKGP 1mfgA 1278 :SMEIRVRVEKDP T0340 16 :GYGFNLHSDKS 1mfgA 1290 :ELGFSISGGVG T0340 27 :RPGQYIRSVDPGSPAAR 1mfgA 1310 :DDGIFVTRVQPEGPASK T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGP 1mfgA 1365 :IVRE T0340 87 :S 1mfgA 1370 :S Number of specific fragments extracted= 7 number of extra gaps= 2 total=2148 Number of alignments=577 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1mfgA)G1277 Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 Warning: unaligning (T0340)T88 because last residue in template chain is (1mfgA)S1371 T0340 3 :LRPRLCHLRKGP 1mfgA 1278 :SMEIRVRVEKDP T0340 16 :GYGFNLHSDKS 1mfgA 1290 :ELGFSISGGVG T0340 27 :RPGQYIRSVDPGSPAA 1mfgA 1310 :DDGIFVTRVQPEGPAS T0340 45 :G 1mfgA 1326 :K T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGP 1mfgA 1365 :IVRE T0340 87 :S 1mfgA 1370 :S Number of specific fragments extracted= 8 number of extra gaps= 2 total=2156 Number of alignments=578 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 10 :LRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARS 1mfgA 1293 :FSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKL T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VV 1mfgA 1365 :IV Number of specific fragments extracted= 4 number of extra gaps= 2 total=2160 Number of alignments=579 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 8 :CHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARS 1mfgA 1291 :LGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKL T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVG 1mfgA 1365 :IVR Number of specific fragments extracted= 4 number of extra gaps= 2 total=2164 Number of alignments=580 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1mfgA)G1277 Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0340 3 :LRPRLCHLRKGPQG 1mfgA 1278 :SMEIRVRVEKDPEL T0340 18 :GFNLHSDKS 1mfgA 1292 :GFSISGGVG T0340 27 :RPGQYIRSVDPGSPAA 1mfgA 1310 :DDGIFVTRVQPEGPAS T0340 45 :G 1mfgA 1326 :K T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGPST 1mfgA 1365 :IVREVS Number of specific fragments extracted= 7 number of extra gaps= 2 total=2171 Number of alignments=581 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0340)D77 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0340)E78 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0340)L81 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0340)L82 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 Warning: unaligning (T0340)R89 because last residue in template chain is (1mfgA)S1371 T0340 3 :LRPRLCHLRKGPQ 1mfgA 1278 :SMEIRVRVEKDPE T0340 17 :YGFNLHSDKS 1mfgA 1291 :LGFSISGGVG T0340 27 :RPGQYIRSVDPGSPAA 1mfgA 1310 :DDGIFVTRVQPEGPAS T0340 45 :G 1mfgA 1326 :K T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 1mfgA 1328 :LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0340 79 :AR 1mfgA 1361 :VE T0340 83 :VVGPST 1mfgA 1365 :IVREVS Number of specific fragments extracted= 7 number of extra gaps= 2 total=2178 Number of alignments=582 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n7fA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1n7fA/merged-local-a2m # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)L3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1n7fA 669 :IIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2181 Number of alignments=583 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1n7fA 669 :IIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2184 Number of alignments=584 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRP 1n7fA 670 :IYTVELKRYGGPLGITISGTEEPF T0340 29 :GQYIRSVDPGSPAARSG 1n7fA 695 :PIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2187 Number of alignments=585 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7fA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2190 Number of alignments=586 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7fA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2193 Number of alignments=587 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0340 6 :RLCHLRKGPQGYGFNLHSDKS 1n7fA 671 :YTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2196 Number of alignments=588 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRP 1n7fA 670 :IYTVELKRYGGPLGITISGTEEPF T0340 29 :GQYIRSVDPGSPAARSG 1n7fA 695 :PIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2199 Number of alignments=589 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRP 1n7fA 670 :IYTVELKRYGGPLGITISGTEEPF T0340 29 :GQYIRSVDPGSPAARSG 1n7fA 695 :PIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2202 Number of alignments=590 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)L3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRP 1n7fA 669 :IIYTVELKRYGGPLGITISGTEEPF T0340 29 :GQYIRSVDPGSPAARSG 1n7fA 695 :PIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2205 Number of alignments=591 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)L3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRP 1n7fA 669 :IIYTVELKRYGGPLGITISGTEEPF T0340 29 :GQYIRSVDPGSPAARSG 1n7fA 695 :PIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2208 Number of alignments=592 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7fA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2211 Number of alignments=593 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7fA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2214 Number of alignments=594 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)L3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1n7fA 669 :IIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2217 Number of alignments=595 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)L3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1n7fA 669 :IIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2220 Number of alignments=596 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7fA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKI Number of specific fragments extracted= 3 number of extra gaps= 0 total=2223 Number of alignments=597 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKS 1n7fA 670 :IYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2226 Number of alignments=598 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)L3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1n7fA 669 :IIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2229 Number of alignments=599 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0340)L3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0340)P86 because last residue in template chain is (1n7fA)Q753 T0340 4 :RPRLCHLRKGPQGYGFNLHSDKS 1n7fA 669 :IIYTVELKRYGGPLGITISGTEE T0340 27 :RPGQYIRSVDPGSPAARSG 1n7fA 693 :FDPIIISSLTKGGLAERTG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVG 1n7fA 713 :IHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 3 number of extra gaps= 0 total=2232 Number of alignments=600 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 2f0aA/merged-local-a2m # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0340)P14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0340 5 :PRLCHLR 2f0aA 252 :IITVTLN T0340 12 :KG 2f0aA 260 :EK T0340 16 :GYGFNLHSDKS 2f0aA 264 :FLGISIVGQSN T0340 27 :RPGQYIRSVDPGSPAARSG 2f0aA 278 :DGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 6 number of extra gaps= 1 total=2238 Number of alignments=601 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)P14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0340 5 :PRLCHLR 2f0aA 252 :IITVTLN T0340 12 :KG 2f0aA 260 :EK T0340 16 :GYGFNLHSDKS 2f0aA 264 :FLGISIVGQSN T0340 27 :RPGQYIRSVDPGSPAARSG 2f0aA 278 :DGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 6 number of extra gaps= 1 total=2244 Number of alignments=602 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 T0340 5 :PRLCHLRKGP 2f0aA 252 :IITVTLNMEK T0340 16 :GYGFNLHSDKSRP 2f0aA 264 :FLGISIVGQSNER T0340 29 :GQYIRSVDPGSPAARSG 2f0aA 280 :GIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2249 Number of alignments=603 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 T0340 5 :PRLCHLRKGP 2f0aA 252 :IITVTLNMEK T0340 16 :GYGFNLHSDKSRP 2f0aA 264 :FLGISIVGQSNER T0340 29 :GQYIRSVDPGSPAARSG 2f0aA 280 :GIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2254 Number of alignments=604 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)P14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0340 7 :LCHLRKG 2f0aA 255 :VTLNMEK T0340 16 :GYGFNLHSDKS 2f0aA 264 :FLGISIVGQSN T0340 27 :RPGQYIRSVDPGSPAARSG 2f0aA 278 :DGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI Number of specific fragments extracted= 4 number of extra gaps= 1 total=2258 Number of alignments=605 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)P14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0340 7 :LCHLRKG 2f0aA 255 :VTLNMEK T0340 16 :GYGFNLHSDKS 2f0aA 264 :FLGISIVGQSN T0340 27 :RPGQYIRSVDPGSPAARSG 2f0aA 278 :DGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARL 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDIVHKPGP Number of specific fragments extracted= 4 number of extra gaps= 1 total=2262 Number of alignments=606 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0340)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 5 :PRLCHLRKGP 2f0aA 252 :IITVTLNMEK T0340 17 :YGFNLHSDK 2f0aA 265 :LGISIVGQS T0340 26 :SRPGQYIRSVDPGSPAARSG 2f0aA 277 :GDGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2267 Number of alignments=607 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0340)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 6 :RLCHLRKGP 2f0aA 253 :ITVTLNMEK T0340 17 :YGFNLHSDK 2f0aA 265 :LGISIVGQS T0340 26 :SRPGQYIRSVDPGSPAARSG 2f0aA 277 :GDGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2272 Number of alignments=608 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 5 :PRLCHLRKG 2f0aA 252 :IITVTLNME T0340 16 :GYGFNLHSDK 2f0aA 264 :FLGISIVGQS T0340 26 :SRPGQYIRSVDPGSPAARSG 2f0aA 277 :GDGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2277 Number of alignments=609 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)R4 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 5 :PRLCHLR 2f0aA 252 :IITVTLN T0340 16 :GYGFNLHS 2f0aA 264 :FLGISIVG T0340 24 :DKSRPGQYIRSVDPGSPAARSG 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2282 Number of alignments=610 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0340)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0340 5 :PRLCHLRKGP 2f0aA 252 :IITVTLNMEK T0340 17 :YGFNLHSDKS 2f0aA 265 :LGISIVGQSN T0340 27 :RPGQYIRSVDPGSPAARSG 2f0aA 278 :DGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVG 2f0aA 331 :PGPIVLTVAK Number of specific fragments extracted= 5 number of extra gaps= 1 total=2287 Number of alignments=611 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0340)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0340 6 :RLCHLRKGP 2f0aA 253 :ITVTLNMEK T0340 17 :YGFNLHSDKS 2f0aA 265 :LGISIVGQSN T0340 27 :RPGQYIRSVDPGSPAARSG 2f0aA 278 :DGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVG 2f0aA 331 :PGPIVLTVAK Number of specific fragments extracted= 5 number of extra gaps= 1 total=2292 Number of alignments=612 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 5 :PRLCHLRKGP 2f0aA 252 :IITVTLNMEK T0340 16 :GYGFNLHSDKS 2f0aA 264 :FLGISIVGQSN T0340 27 :RPGQYIRSVDPGSPAARSG 2f0aA 278 :DGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2297 Number of alignments=613 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 5 :PRLCHLR 2f0aA 252 :IITVTLN T0340 16 :GYGFNLHS 2f0aA 264 :FLGISIVG T0340 24 :DKSRPGQYIRSVDPGSPAARSG 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDI T0340 76 :EDEARLLVVGP 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2302 Number of alignments=614 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)P14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0340 13 :G 2f0aA 261 :K T0340 16 :GYGFNLHSDKS 2f0aA 264 :FLGISIVGQSN T0340 27 :RPGQYIRSVDPGSPAARSG 2f0aA 278 :DGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKA 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRD Number of specific fragments extracted= 4 number of extra gaps= 1 total=2306 Number of alignments=615 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)P14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0340 11 :RKG 2f0aA 259 :MEK T0340 16 :GYGFNLHSDKS 2f0aA 264 :FLGISIVGQSN T0340 27 :RPGQYIRSVDPGSPAARSG 2f0aA 278 :DGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRDIV Number of specific fragments extracted= 4 number of extra gaps= 1 total=2310 Number of alignments=616 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 16 :GYGFNLHSDKS 2f0aA 264 :FLGISIVGQSN T0340 27 :RPGQYIRSVDPGSPAARSG 2f0aA 278 :DGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKA 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRD T0340 75 :REDEARLLVVGP 2f0aA 330 :KPGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2314 Number of alignments=617 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0340)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0340)S87 because last residue in template chain is (2f0aA)E342 T0340 16 :GYGFNLHS 2f0aA 264 :FLGISIVG T0340 24 :DKSRPGQYIRSVDPGSPAARSG 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADG T0340 46 :LRAQDRLIEVNGQNVEGLRHAEVVASIKA 2f0aA 298 :IEPGDMLLQVNDINFENMSNDDAVRVLRD T0340 75 :REDEARLLVVGP 2f0aA 330 :KPGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2318 Number of alignments=618 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1lcyA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1lcyA expands to /projects/compbio/data/pdb/1lcy.pdb.gz 1lcyA:# T0340 read from 1lcyA/merged-local-a2m # 1lcyA read from 1lcyA/merged-local-a2m # adding 1lcyA to template set # found chain 1lcyA in template set T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRH 1lcyA 257 :GVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAED Number of specific fragments extracted= 1 number of extra gaps= 0 total=2319 Number of alignments=619 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 18 :GFNLHSDKS 1lcyA 247 :REPSFPDVQ T0340 28 :PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVA 1lcyA 256 :HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2321 Number of alignments=620 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 15 :QGYGFNLHSDKS 1lcyA 242 :AELQLREPSFPD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 255 :QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN T0340 65 :HAEVVASI 1lcyA 291 :AEDVYEAV T0340 74 :AREDEARLLVVGPSTRL 1lcyA 299 :RTQSQLAVQIRRGRETL Number of specific fragments extracted= 4 number of extra gaps= 0 total=2325 Number of alignments=621 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 15 :QGYGFNLHSDKS 1lcyA 242 :AELQLREPSFPD T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 255 :QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN T0340 65 :HAEVVASI 1lcyA 291 :AEDVYEAV T0340 74 :AREDEARLLVVGP 1lcyA 299 :RTQSQLAVQIRRG Number of specific fragments extracted= 4 number of extra gaps= 0 total=2329 Number of alignments=622 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 2 :MLRPRLCHLRKGPQGYGFNLHSD 1lcyA 35 :DRHPFLGREVPISNGSGFVVAAD T0340 25 :KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 253 :DVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN T0340 65 :HAEVVASIK 1lcyA 291 :AEDVYEAVR T0340 75 :REDEARLLVV 1lcyA 300 :TQSQLAVQIR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2333 Number of alignments=623 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 4 :RPRLCHLRKGPQGYGFNLHSD 1lcyA 37 :HPFLGREVPISNGSGFVVAAD T0340 25 :KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 253 :DVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN T0340 65 :HAEVVASIK 1lcyA 291 :AEDVYEAVR T0340 75 :REDEARLLVV 1lcyA 300 :TQSQLAVQIR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2337 Number of alignments=624 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1lcyA 257 :GVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA Number of specific fragments extracted= 1 number of extra gaps= 0 total=2338 Number of alignments=625 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1lcyA 255 :QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA T0340 66 :AEVVASIK 1lcyA 292 :EDVYEAVR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2340 Number of alignments=626 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 255 :QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN T0340 65 :HAEVVASIKAR 1lcyA 291 :AEDVYEAVRTQ T0340 77 :DEARLLVVGPS 1lcyA 302 :SQLAVQIRRGR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2343 Number of alignments=627 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 255 :QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN T0340 65 :HAEVVASIKARE 1lcyA 291 :AEDVYEAVRTQS T0340 78 :EARLLVVGPS 1lcyA 303 :QLAVQIRRGR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2346 Number of alignments=628 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 257 :GVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN Number of specific fragments extracted= 1 number of extra gaps= 0 total=2347 Number of alignments=629 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1lcyA 255 :QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA T0340 66 :AEVVASIKA 1lcyA 292 :EDVYEAVRT Number of specific fragments extracted= 2 number of extra gaps= 0 total=2349 Number of alignments=630 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 255 :QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN T0340 65 :HAEVVASIKAR 1lcyA 291 :AEDVYEAVRTQ T0340 77 :DEARLLVVGPS 1lcyA 302 :SQLAVQIRRGR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2352 Number of alignments=631 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 24 :DKS 1lcyA 248 :EPS T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 255 :QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN T0340 65 :HAEVVASIKARE 1lcyA 291 :AEDVYEAVRTQS T0340 78 :EARLLVVGPST 1lcyA 303 :QLAVQIRRGRE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2356 Number of alignments=632 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 22 :HSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1lcyA 250 :SFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA T0340 66 :AEVVASIKAREDEARLLVV 1lcyA 292 :EDVYEAVRTQSQLAVQIRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2358 Number of alignments=633 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 24 :DKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1lcyA 252 :PDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA T0340 66 :AEVVASIKARED 1lcyA 292 :EDVYEAVRTQSQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=2360 Number of alignments=634 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 24 :DKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 252 :PDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN T0340 65 :HAEVVASIKAREDEARLL 1lcyA 291 :AEDVYEAVRTQSQLAVQI T0340 84 :VGP 1lcyA 309 :RRG Number of specific fragments extracted= 3 number of extra gaps= 0 total=2363 Number of alignments=635 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0340 25 :KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1lcyA 253 :DVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN T0340 65 :HAEVVASIKARE 1lcyA 291 :AEDVYEAVRTQS T0340 78 :EARLLVVGPS 1lcyA 303 :QLAVQIRRGR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2366 Number of alignments=636 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1sotA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1sotA expands to /projects/compbio/data/pdb/1sot.pdb.gz 1sotA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0340 read from 1sotA/merged-local-a2m # 1sotA read from 1sotA/merged-local-a2m # adding 1sotA to template set # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V83 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2367 Number of alignments=637 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2368 Number of alignments=638 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V83 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2369 Number of alignments=639 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)E230 Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V83 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0340 16 :GYGFN 1sotA 231 :GIGFA T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2371 Number of alignments=640 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISA Number of specific fragments extracted= 1 number of extra gaps= 0 total=2372 Number of alignments=641 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V83 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISA T0340 66 :AEVVASIKAR 1sotA 316 :LETMDQVAEI T0340 76 :EDEARLL 1sotA 328 :GSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2375 Number of alignments=642 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V83 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0340)R89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVE 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAI T0340 64 :RHAEVVASIKAR 1sotA 314 :SALETMDQVAEI T0340 76 :EDEARLL 1sotA 328 :GSVIPVV T0340 90 :L 1sotA 342 :L Number of specific fragments extracted= 4 number of extra gaps= 0 total=2379 Number of alignments=643 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V83 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0340)R89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVE 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAI T0340 64 :RHAEVVASIKAR 1sotA 314 :SALETMDQVAEI T0340 76 :EDEARLL 1sotA 328 :GSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2382 Number of alignments=644 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V83 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVE 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAI T0340 64 :RHAEVVASIKAR 1sotA 314 :SALETMDQVAEI T0340 76 :EDEARLL 1sotA 328 :GSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2385 Number of alignments=645 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V83 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEG 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS T0340 65 :HAEVVASIKAR 1sotA 315 :ALETMDQVAEI T0340 76 :EDEARLL 1sotA 328 :GSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2388 Number of alignments=646 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V83 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0340)T88 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVE 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAI T0340 64 :RHAEVVASIKAR 1sotA 314 :SALETMDQVAEI T0340 76 :EDEARLL 1sotA 328 :GSVIPVV T0340 89 :RL 1sotA 342 :LT Number of specific fragments extracted= 4 number of extra gaps= 0 total=2392 Number of alignments=647 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V83 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0340)T88 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVE 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAI T0340 64 :RHAEVVASIKAR 1sotA 314 :SALETMDQVAEI T0340 76 :EDEARLL 1sotA 328 :GSVIPVV T0340 89 :R 1sotA 342 :L Number of specific fragments extracted= 4 number of extra gaps= 0 total=2396 Number of alignments=648 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQN 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2397 Number of alignments=649 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V84 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISA T0340 64 :RHAEVVAS 1sotA 318 :TMDQVAEI T0340 75 :REDEARLLV 1sotA 326 :RPGSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2400 Number of alignments=650 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0340)V84 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0340)L90 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISA T0340 66 :AEVVASIKA 1sotA 316 :LETMDQVAE T0340 75 :REDEARLLV 1sotA 326 :RPGSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2403 Number of alignments=651 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0340)G29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0340 30 :QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVE 1sotA 282 :IVVNEVSPDGPAANAGIQVNDLIISVDNKPAI T0340 64 :RHAEVVASIKAREDEARL 1sotA 314 :SALETMDQVAEIRPGSVI Number of specific fragments extracted= 2 number of extra gaps= 0 total=2405 Number of alignments=652 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0340 read from 1g9oA/merged-local-a2m # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2406 Number of alignments=653 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2407 Number of alignments=654 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2408 Number of alignments=655 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2409 Number of alignments=656 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2410 Number of alignments=657 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2411 Number of alignments=658 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2412 Number of alignments=659 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2413 Number of alignments=660 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2414 Number of alignments=661 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1g9oA)R9 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2415 Number of alignments=662 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1g9oA)R9 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE T0340 88 :TR 1g9oA 97 :EQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=2417 Number of alignments=663 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2418 Number of alignments=664 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2419 Number of alignments=665 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1g9oA)R9 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2420 Number of alignments=666 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1g9oA)R9 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP T0340 87 :STRL 1g9oA 96 :DEQL Number of specific fragments extracted= 2 number of extra gaps= 0 total=2422 Number of alignments=667 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2423 Number of alignments=668 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 5 :PRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2424 Number of alignments=669 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set Warning: unaligning (T0340)M2 because first residue in template chain is (1g9oA)R9 T0340 3 :LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2425 Number of alignments=670 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0340 4 :RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPSTRL 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2426 Number of alignments=671 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1y8tA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1y8tA expands to /projects/compbio/data/pdb/1y8t.pdb.gz 1y8tA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0340 read from 1y8tA/merged-local-a2m # 1y8tA read from 1y8tA/merged-local-a2m # adding 1y8tA to template set # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0340 17 :YGFNLH 1y8tA 231 :LGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 5 total=2432 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 T0340 15 :QGYGFNLH 1y8tA 229 :ASLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 6 total=2438 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)L10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)G224 Warning: unaligning (T0340)R11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)G224 Warning: unaligning (T0340)K12 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0340)G13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0340)P14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0340 5 :PRLCH 1y8tA 218 :DELIS T0340 15 :QGY 1y8tA 228 :HAS T0340 18 :GFNLH 1y8tA 232 :GVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 8 number of extra gaps= 6 total=2446 Number of alignments=672 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)L10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)G224 Warning: unaligning (T0340)R11 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)G224 Warning: unaligning (T0340)K12 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0340)G13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0340)P14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 T0340 5 :PRLCH 1y8tA 218 :DELIS T0340 15 :QGY 1y8tA 228 :HAS T0340 18 :GFNLH 1y8tA 232 :GVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 8 number of extra gaps= 7 total=2454 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0340 17 :YGFNLH 1y8tA 231 :LGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLV 1y8tA 290 :GATVALTF Number of specific fragments extracted= 6 number of extra gaps= 5 total=2460 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0340 16 :GYGFNLHS 1y8tA 203 :GLGFAIPV T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLV 1y8tA 290 :GATVALTF Number of specific fragments extracted= 6 number of extra gaps= 4 total=2466 Number of alignments=673 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0340)S87 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0340 16 :GYGFNLH 1y8tA 230 :SLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 6 total=2472 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0340)S87 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0340 14 :PQGYGFNLH 1y8tA 228 :HASLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 6 total=2478 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0340)S87 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0340 16 :GYGFNLH 1y8tA 230 :SLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VE 1y8tA 274 :IN T0340 64 :RHAEVVASIKA 1y8tA 276 :SADALVAAVRS T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ T0340 88 :TR 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 5 total=2486 Number of alignments=674 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0340)S87 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0340 16 :GYGFNLH 1y8tA 230 :SLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEG 1y8tA 274 :INS T0340 65 :HAEVVASIKAR 1y8tA 277 :ADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ T0340 88 :TR 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 5 total=2494 Number of alignments=675 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 T0340 16 :GYGFNLH 1y8tA 230 :SLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 6 total=2500 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)G13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 T0340 14 :PQGYGFNLH 1y8tA 228 :HASLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 7 total=2506 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0340)S87 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0340 16 :GYGFNLH 1y8tA 230 :SLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VE 1y8tA 274 :IN T0340 64 :RHAEVVASIKAR 1y8tA 276 :SADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ T0340 88 :TR 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 5 total=2514 Number of alignments=676 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0340)S87 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0340 16 :GYGFNLH 1y8tA 230 :SLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEG 1y8tA 274 :INS T0340 65 :HAEVVASIKAR 1y8tA 277 :ADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ T0340 88 :TR 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 5 total=2522 Number of alignments=677 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)G13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0340 14 :PQGYGFNLH 1y8tA 228 :HASLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 6 total=2528 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)G13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 T0340 14 :PQGYGFNLH 1y8tA 228 :HASLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 7 total=2534 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)A74 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0340)S87 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0340 16 :GYGFNLH 1y8tA 230 :SLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEGLRHAEVVASIK 1y8tA 274 :INSADALVAAVRSK T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ T0340 88 :TR 1y8tA 302 :GG Number of specific fragments extracted= 7 number of extra gaps= 6 total=2541 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0340)S23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0340)D24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0340)K25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0340)S26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0340)R27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0340)P28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0340)S39 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0340)P40 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0340)R43 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0340)S44 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0340)G45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0340)L46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0340)G57 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0340)Q58 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0340)N59 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0340)R75 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0340)G85 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0340)P86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0340)S87 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0340 16 :GYGFNLH 1y8tA 230 :SLGVQVT T0340 29 :GQYIRSVDPG 1y8tA 243 :GAKIVEVVAG T0340 41 :AA 1y8tA 255 :AA T0340 47 :RAQDRLIEVN 1y8tA 261 :PKGVVVTKVD T0340 60 :VEG 1y8tA 274 :INS T0340 65 :HAEVVASIKA 1y8tA 277 :ADALVAAVRS T0340 76 :EDEARLLVV 1y8tA 290 :GATVALTFQ T0340 88 :TR 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 6 total=2549 Number of alignments=678 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ky9A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ky9A expands to /projects/compbio/data/pdb/1ky9.pdb.gz 1ky9A:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0340 read from 1ky9A/merged-local-a2m # 1ky9A read from 1ky9A/merged-local-a2m # adding 1ky9A to template set # found chain 1ky9A in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9A)I267 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1ky9A)I267 T0340 2 :MLRPRL 1ky9A 260 :VKRGEL T0340 10 :LRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1ky9A 268 :MGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLL Number of specific fragments extracted= 2 number of extra gaps= 1 total=2551 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set Warning: unaligning (T0340)C8 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9A)I267 Warning: unaligning (T0340)H9 because of BadResidue code BAD_PEPTIDE at template residue (1ky9A)I267 T0340 2 :MLRPRL 1ky9A 260 :VKRGEL T0340 10 :LRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1ky9A 268 :MGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLL Number of specific fragments extracted= 2 number of extra gaps= 1 total=2553 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1ky9A 287 :GAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2554 Number of alignments=679 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0340 26 :SRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 1ky9A 284 :AQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDG Number of specific fragments extracted= 1 number of extra gaps= 0 total=2555 Number of alignments=680 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0340 25 :KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1ky9A 283 :DAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF T0340 70 :ASIKAR 1ky9A 322 :AALRAQ T0340 76 :EDEARLLVVGPS 1ky9A 334 :GSKLTLGLLRDG Number of specific fragments extracted= 3 number of extra gaps= 0 total=2558 Number of alignments=681 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0340 25 :KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1ky9A 283 :DAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF T0340 66 :AEVVASIKAR 1ky9A 322 :AALRAQVGTM T0340 76 :EDEARLLVVGPS 1ky9A 334 :GSKLTLGLLRDG T0340 88 :TRL 1ky9A 350 :VNL Number of specific fragments extracted= 4 number of extra gaps= 0 total=2562 Number of alignments=682 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=2562 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=2562 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0340 26 :S 1ky9A 283 :D T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1ky9A 285 :QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF T0340 66 :AEVVASIKAR 1ky9A 322 :AALRAQVGTM T0340 76 :EDEARLLVVGPST 1ky9A 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 4 number of extra gaps= 0 total=2566 Number of alignments=683 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0340 26 :S 1ky9A 283 :D T0340 27 :RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1ky9A 285 :QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF T0340 66 :AEVVASIKAR 1ky9A 322 :AALRAQVGTM T0340 76 :EDEARLLVVGPS 1ky9A 334 :GSKLTLGLLRDG Number of specific fragments extracted= 4 number of extra gaps= 0 total=2570 Number of alignments=684 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0340 29 :GQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVV 1ky9A 287 :GAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2571 Number of alignments=685 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=2571 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0340 25 :KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1ky9A 283 :DAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF T0340 70 :ASIKA 1ky9A 322 :AALRA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2573 Number of alignments=686 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0340 24 :DKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGL 1ky9A 282 :VDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF T0340 66 :AEVVASIKA 1ky9A 322 :AALRAQVGT T0340 75 :REDEARLLVVGPS 1ky9A 333 :VGSKLTLGLLRDG Number of specific fragments extracted= 3 number of extra gaps= 0 total=2576 Number of alignments=687 # command:NUMB_ALIGNS: 687 evalue: 0 0.0000, weight 43.0656 evalue: 1 0.0000, weight 39.5183 evalue: 2 0.0000, weight 39.2382 evalue: 3 0.0000, weight 37.7625 evalue: 4 0.0000, weight 37.7035 evalue: 5 0.0000, weight 37.0730 evalue: 6 0.0000, weight 34.3538 evalue: 7 0.0000, weight 32.8000 evalue: 8 0.0000, weight 30.7390 evalue: 9 0.0000, weight 21.3033 evalue: 10 0.0000, weight 40.9728 evalue: 11 0.0000, weight 38.2341 evalue: 12 0.0000, weight 38.2177 evalue: 13 0.0000, weight 38.2078 evalue: 14 0.0000, weight 36.9164 evalue: 15 0.0000, weight 35.3572 evalue: 16 0.0000, weight 32.1146 evalue: 17 0.0000, weight 31.3254 evalue: 18 0.0000, weight 30.4997 evalue: 19 0.0000, weight 20.6036 evalue: 20 0.0000, weight 42.2706 evalue: 21 0.0000, weight 37.3803 evalue: 22 0.0000, weight 36.0987 evalue: 23 0.0000, weight 35.9669 evalue: 24 0.0000, weight 34.3747 evalue: 25 0.0000, weight 33.2388 evalue: 26 0.0000, weight 32.5614 evalue: 27 0.0000, weight 32.0656 evalue: 28 0.0000, weight 27.4457 evalue: 29 0.0000, weight 26.8320 evalue: 30 0.0000, weight 42.2381 evalue: 31 0.0000, weight 38.3891 evalue: 32 0.0000, weight 38.1221 evalue: 33 0.0000, weight 37.3432 evalue: 34 0.0000, weight 36.4742 evalue: 35 0.0000, weight 35.3229 evalue: 36 0.0000, weight 33.1830 evalue: 37 0.0000, weight 32.5197 evalue: 38 0.0000, weight 29.6740 evalue: 39 0.0000, weight 22.6338 evalue: 40 0.0025, weight 6.5502 evalue: 41 0.0025, weight 6.5502 evalue: 42 0.0025, weight 6.5502 evalue: 43 0.0025, weight 6.5502 evalue: 44 0.0025, weight 6.5502 evalue: 45 0.0025, weight 6.5502 evalue: 46 0.0025, weight 6.5502 evalue: 47 0.0025, weight 6.5502 evalue: 48 0.0025, weight 6.5502 evalue: 49 0.0025, weight 6.5502 evalue: 50 0.0025, weight 6.5502 evalue: 51 0.0025, weight 6.5502 evalue: 52 0.0025, weight 6.5502 evalue: 53 0.3148, weight 1.8654 evalue: 54 0.3148, weight 1.8654 evalue: 55 0.3148, weight 1.8654 evalue: 56 0.3148, weight 1.8654 evalue: 57 0.3148, weight 1.8654 evalue: 58 0.3148, weight 1.8654 evalue: 59 0.0000, weight 16.1867 evalue: 60 0.0000, weight 16.1867 evalue: 61 0.0000, weight 16.1867 evalue: 62 0.0000, weight 16.1867 evalue: 63 0.0000, weight 16.1867 evalue: 64 0.0000, weight 16.1867 evalue: 65 0.0000, weight 16.1867 evalue: 66 0.0000, weight 16.1867 evalue: 67 0.0000, weight 16.1867 evalue: 68 0.0000, weight 16.1867 evalue: 69 0.0000, weight 16.1867 evalue: 70 0.0000, weight 16.1867 evalue: 71 0.0000, weight 16.1867 evalue: 72 0.0000, weight 16.1867 evalue: 73 0.0000, weight 16.1867 evalue: 74 0.0000, weight 14.9170 evalue: 75 0.0000, weight 14.9170 evalue: 76 0.0000, weight 14.9170 evalue: 77 0.0000, weight 14.9170 evalue: 78 0.0000, weight 14.9170 evalue: 79 0.0000, weight 14.9170 evalue: 80 0.0000, weight 14.9170 evalue: 81 0.0000, weight 14.9170 evalue: 82 0.0000, weight 14.9170 evalue: 83 0.0000, weight 14.9170 evalue: 84 0.0000, weight 14.9170 evalue: 85 0.0000, weight 14.9170 evalue: 86 0.0000, weight 14.9170 evalue: 87 0.0000, weight 14.9170 evalue: 88 0.3551, weight 1.7644 evalue: 89 0.3551, weight 1.7644 evalue: 90 0.3551, weight 1.7644 evalue: 91 0.3551, weight 1.7644 evalue: 92 0.3551, weight 1.7644 evalue: 93 0.3551, weight 1.7644 evalue: 94 0.0000, weight 35.3229 evalue: 95 0.0000, weight 35.3229 evalue: 96 0.0000, weight 35.3229 evalue: 97 0.0000, weight 35.3229 evalue: 98 0.0000, weight 35.3229 evalue: 99 0.0000, weight 35.3229 evalue: 100 0.0000, weight 35.3229 evalue: 101 0.0000, weight 35.3229 evalue: 102 0.0000, weight 35.3229 evalue: 103 0.0000, weight 35.3229 evalue: 104 0.0000, weight 35.3229 evalue: 105 0.0000, weight 35.3229 evalue: 106 0.0000, weight 35.3229 evalue: 107 0.0000, weight 35.3229 evalue: 108 0.0000, weight 35.3229 evalue: 109 0.0000, weight 35.3229 evalue: 110 0.0000, weight 35.3229 evalue: 111 0.0000, weight 35.3229 evalue: 112 0.0000, weight 35.3229 evalue: 113 0.0000, weight 14.3749 evalue: 114 0.0000, weight 14.3749 evalue: 115 0.0000, weight 14.3749 evalue: 116 0.0000, weight 14.3749 evalue: 117 0.0000, weight 14.3749 evalue: 118 0.0000, weight 14.3749 evalue: 119 0.0000, weight 14.3749 evalue: 120 0.0000, weight 14.3749 evalue: 121 0.0000, weight 14.3749 evalue: 122 0.0000, weight 14.3749 evalue: 123 0.0000, weight 14.3749 evalue: 124 0.0000, weight 14.3749 evalue: 125 0.0000, weight 14.3749 evalue: 126 0.0000, weight 14.3749 evalue: 127 0.0000, weight 14.3749 evalue: 128 0.0000, weight 18.7706 evalue: 129 0.0000, weight 18.7706 evalue: 130 0.0000, weight 18.7706 evalue: 131 0.0000, weight 18.7706 evalue: 132 0.0000, weight 18.7706 evalue: 133 0.0000, weight 18.7706 evalue: 134 0.0000, weight 18.7706 evalue: 135 0.0000, weight 18.7706 evalue: 136 0.0000, weight 18.7706 evalue: 137 0.0000, weight 18.7706 evalue: 138 0.0000, weight 18.7706 evalue: 139 0.0000, weight 18.7706 evalue: 140 0.0000, weight 18.7706 evalue: 141 0.0000, weight 18.7706 evalue: 142 0.0000, weight 18.7706 evalue: 143 0.0000, weight 22.6338 evalue: 144 0.0000, weight 22.6338 evalue: 145 0.0000, weight 22.6338 evalue: 146 0.0000, weight 22.6338 evalue: 147 0.0000, weight 22.6338 evalue: 148 0.0000, weight 22.6338 evalue: 149 0.0000, weight 22.6338 evalue: 150 0.0000, weight 22.6338 evalue: 151 0.0000, weight 22.6338 evalue: 152 0.0000, weight 22.6338 evalue: 153 0.0000, weight 22.6338 evalue: 154 0.0000, weight 22.6338 evalue: 155 0.0000, weight 22.6338 evalue: 156 0.0000, weight 22.6338 evalue: 157 0.0000, weight 22.6338 evalue: 158 0.0000, weight 22.6338 evalue: 159 0.0000, weight 22.6338 evalue: 160 0.0000, weight 22.6338 evalue: 161 0.0000, weight 22.6338 evalue: 162 0.0000, weight 34.4972 evalue: 163 0.0000, weight 34.4972 evalue: 164 0.0000, weight 34.4972 evalue: 165 0.0000, weight 34.4972 evalue: 166 0.0000, weight 34.4972 evalue: 167 0.0000, weight 34.4972 evalue: 168 0.0000, weight 34.4972 evalue: 169 0.0000, weight 34.4972 evalue: 170 0.0000, weight 34.4972 evalue: 171 0.0000, weight 34.4972 evalue: 172 0.0000, weight 34.4972 evalue: 173 0.0000, weight 34.4972 evalue: 174 0.0000, weight 34.4972 evalue: 175 0.0000, weight 34.4972 evalue: 176 0.0000, weight 34.4972 evalue: 177 0.0000, weight 34.4972 evalue: 178 0.0000, weight 34.4972 evalue: 179 0.0000, weight 34.4972 evalue: 180 0.0000, weight 29.6019 evalue: 181 0.0000, weight 29.6019 evalue: 182 0.0000, weight 29.6019 evalue: 183 0.0000, weight 29.6019 evalue: 184 0.0000, weight 29.6019 evalue: 185 0.0000, weight 29.6019 evalue: 186 0.0000, weight 29.6019 evalue: 187 0.0000, weight 29.6019 evalue: 188 0.0000, weight 29.6019 evalue: 189 0.0000, weight 29.6019 evalue: 190 0.0000, weight 29.6019 evalue: 191 0.0000, weight 29.6019 evalue: 192 0.0000, weight 29.6019 evalue: 193 0.0000, weight 29.6019 evalue: 194 0.0000, weight 29.6019 evalue: 195 0.0000, weight 29.6019 evalue: 196 0.0000, weight 29.6019 evalue: 197 0.0000, weight 29.6019 evalue: 198 0.0000, weight 27.9684 evalue: 199 0.0000, weight 27.9684 evalue: 200 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weight 5.7121 RES2ATOM 0 2 RES2ATOM 1 8 RES2ATOM 2 16 RES2ATOM 3 24 RES2ATOM 4 35 RES2ATOM 5 42 RES2ATOM 6 53 RES2ATOM 7 61 RES2ATOM 8 67 RES2ATOM 9 77 RES2ATOM 10 85 RES2ATOM 11 96 RES2ATOM 13 109 RES2ATOM 14 116 RES2ATOM 16 129 RES2ATOM 18 145 RES2ATOM 19 156 RES2ATOM 20 164 RES2ATOM 21 172 RES2ATOM 22 182 RES2ATOM 23 188 RES2ATOM 24 196 RES2ATOM 25 205 RES2ATOM 26 211 RES2ATOM 27 222 RES2ATOM 29 233 RES2ATOM 30 242 RES2ATOM 31 254 RES2ATOM 32 262 RES2ATOM 33 273 RES2ATOM 34 279 RES2ATOM 35 286 RES2ATOM 36 294 RES2ATOM 38 305 RES2ATOM 39 311 RES2ATOM 40 318 RES2ATOM 41 323 RES2ATOM 42 328 RES2ATOM 43 339 RES2ATOM 45 349 RES2ATOM 46 357 RES2ATOM 47 368 RES2ATOM 48 373 RES2ATOM 49 382 RES2ATOM 50 390 RES2ATOM 51 401 RES2ATOM 52 409 RES2ATOM 53 417 RES2ATOM 54 426 RES2ATOM 55 433 RES2ATOM 57 445 RES2ATOM 58 454 RES2ATOM 59 462 RES2ATOM 60 469 RES2ATOM 62 482 RES2ATOM 63 490 RES2ATOM 64 501 RES2ATOM 65 511 RES2ATOM 66 516 RES2ATOM 67 525 RES2ATOM 68 532 RES2ATOM 69 539 RES2ATOM 70 544 RES2ATOM 71 550 RES2ATOM 72 558 RES2ATOM 73 567 RES2ATOM 74 572 RES2ATOM 75 583 RES2ATOM 76 592 RES2ATOM 77 600 RES2ATOM 78 609 RES2ATOM 79 614 RES2ATOM 80 625 RES2ATOM 81 633 RES2ATOM 82 641 RES2ATOM 83 648 RES2ATOM 85 659 RES2ATOM 86 666 RES2ATOM 87 672 RES2ATOM 88 679 RES2ATOM 89 690 Constraint 280 369 5.0319 6.2899 12.5797 1151.1072 Constraint 255 374 5.4346 6.7933 13.5866 1151.1072 Constraint 255 369 4.5264 5.6579 11.3159 1151.1072 Constraint 255 383 3.7569 4.6961 9.3923 1145.7006 Constraint 280 350 4.8316 6.0394 12.0789 1143.8270 Constraint 255 350 4.8613 6.0766 12.1532 1143.1934 Constraint 255 402 5.4399 6.7999 13.5998 1142.1841 Constraint 255 358 5.5546 6.9433 13.8865 1131.9078 Constraint 274 369 4.9254 6.1567 12.3135 1131.0228 Constraint 243 391 4.4277 5.5346 11.0693 1129.8136 Constraint 243 374 5.3109 6.6387 13.2773 1126.6368 Constraint 263 369 5.1756 6.4695 12.9390 1125.6681 Constraint 427 545 4.1962 5.2452 10.4904 1123.2058 Constraint 427 551 5.0278 6.2848 12.5695 1121.5956 Constraint 243 383 5.4959 6.8699 13.7398 1110.1095 Constraint 434 615 4.4006 5.5007 11.0014 1109.5684 Constraint 234 402 3.6899 4.6123 9.2247 1105.3245 Constraint 402 642 4.7733 5.9667 11.9334 1103.5103 Constraint 243 402 5.7682 7.2102 14.4204 1100.1440 Constraint 434 610 5.0787 6.3484 12.6969 1091.6270 Constraint 410 649 4.6497 5.8121 11.6242 1091.5225 Constraint 410 642 5.3387 6.6734 13.3468 1088.0781 Constraint 234 391 5.4005 6.7507 13.5013 1086.4841 Constraint 234 463 4.3976 5.4970 10.9940 1081.4368 Constraint 173 263 3.5070 4.3838 8.7676 1079.7944 Constraint 446 545 4.8809 6.1012 12.2024 1078.3230 Constraint 234 526 4.0868 5.1085 10.2170 1078.0569 Constraint 165 255 4.8323 6.0404 12.0808 1070.6023 Constraint 165 263 4.9013 6.1266 12.2532 1069.0083 Constraint 434 573 4.7671 5.9589 11.9178 1067.3331 Constraint 391 649 3.7461 4.6826 9.3653 1067.1989 Constraint 391 642 5.1098 6.3872 12.7745 1067.0054 Constraint 157 263 3.6737 4.5921 9.1842 1063.9515 Constraint 157 255 5.6707 7.0884 14.1767 1063.9515 Constraint 146 280 4.1621 5.2026 10.4053 1062.0977 Constraint 173 243 4.1427 5.1784 10.3567 1060.9702 Constraint 146 287 5.3977 6.7471 13.4941 1060.6233 Constraint 157 274 3.5496 4.4369 8.8739 1059.3674 Constraint 146 255 4.3229 5.4036 10.8072 1058.8528 Constraint 402 526 5.4874 6.8593 13.7185 1058.0731 Constraint 383 642 3.4985 4.3732 8.7463 1057.3229 Constraint 165 402 5.4263 6.7829 13.5658 1056.1443 Constraint 146 350 5.0840 6.3550 12.7099 1053.6515 Constraint 165 243 5.2437 6.5546 13.1092 1053.0538 Constraint 146 319 3.5286 4.4108 8.8216 1052.5745 Constraint 183 502 4.6873 5.8591 11.7182 1047.6958 Constraint 130 312 4.1554 5.1942 10.3885 1047.3752 Constraint 383 649 5.4230 6.7788 13.5575 1046.2998 Constraint 427 610 5.2769 6.5961 13.1923 1042.6874 Constraint 130 319 4.3024 5.3780 10.7560 1041.6663 Constraint 234 502 5.4728 6.8410 13.6820 1037.0657 Constraint 350 642 5.3760 6.7201 13.4401 1033.3177 Constraint 146 306 5.5778 6.9722 13.9445 1027.2101 Constraint 427 626 4.7201 5.9001 11.8002 1027.0186 Constraint 165 234 4.2582 5.3228 10.6456 1023.8241 Constraint 418 634 3.3027 4.1283 8.2566 1017.6118 Constraint 427 615 5.8217 7.2771 14.5542 1011.5118 Constraint 418 626 5.6033 7.0041 14.0082 1009.2340 Constraint 130 306 5.3979 6.7474 13.4949 1007.7741 Constraint 402 626 4.8284 6.0355 12.0709 990.6630 Constraint 146 274 5.3233 6.6541 13.3081 988.2045 Constraint 280 358 5.4587 6.8234 13.6467 986.9531 Constraint 410 634 3.7916 4.7395 9.4791 981.1824 Constraint 165 526 5.0449 6.3062 12.6123 972.0179 Constraint 78 610 3.9931 4.9914 9.9828 971.0892 Constraint 68 615 4.1100 5.1375 10.2750 969.5305 Constraint 130 610 5.0578 6.3223 12.6445 957.4846 Constraint 78 312 4.0765 5.0957 10.1914 954.6289 Constraint 402 634 5.9331 7.4164 14.8327 953.4521 Constraint 68 610 5.7296 7.1620 14.3241 944.9509 Constraint 62 615 5.7047 7.1309 14.2618 942.6362 Constraint 255 391 6.2207 7.7759 15.5518 941.2653 Constraint 78 601 5.5935 6.9918 13.9837 930.2970 Constraint 54 615 5.1074 6.3842 12.7684 920.0878 Constraint 78 319 5.0071 6.2589 12.5178 919.8495 Constraint 78 340 4.6455 5.8068 11.6136 919.4872 Constraint 62 642 4.9975 6.2469 12.4938 917.8646 Constraint 165 533 5.5930 6.9913 13.9826 915.5074 Constraint 62 350 4.7884 5.9854 11.9709 911.7656 Constraint 86 601 4.4070 5.5088 11.0175 910.0195 Constraint 97 312 4.6555 5.8193 11.6386 908.0016 Constraint 43 642 4.4730 5.5912 11.1825 905.1439 Constraint 68 601 5.0016 6.2520 12.5040 902.8864 Constraint 165 502 5.5372 6.9216 13.8431 901.9693 Constraint 130 551 5.4957 6.8696 13.7393 895.6506 Constraint 427 573 5.2446 6.5558 13.1116 891.6758 Constraint 234 483 5.4132 6.7665 13.5330 891.6537 Constraint 463 545 5.4301 6.7877 13.5753 888.3096 Constraint 97 593 4.7813 5.9766 11.9532 858.1078 Constraint 427 526 5.4894 6.8617 13.7235 857.6718 Constraint 62 626 3.9994 4.9992 9.9984 854.8149 Constraint 86 312 4.9076 6.1345 12.2689 853.0440 Constraint 86 593 5.0966 6.3708 12.7415 847.8226 Constraint 255 642 5.9814 7.4768 14.9536 843.7728 Constraint 36 649 4.2719 5.3399 10.6797 841.5548 Constraint 36 642 5.6505 7.0632 14.1263 838.9987 Constraint 54 626 5.7390 7.1738 14.3475 837.9620 Constraint 350 626 5.8307 7.2883 14.5767 835.4719 Constraint 54 634 4.3541 5.4426 10.8852 834.9874 Constraint 36 410 5.4940 6.8675 13.7351 831.3382 Constraint 43 634 5.8094 7.2617 14.5234 828.2299 Constraint 165 551 5.9496 7.4370 14.8740 823.4038 Constraint 62 340 4.6189 5.7736 11.5471 819.7841 Constraint 97 610 5.3249 6.6562 13.3124 819.2032 Constraint 78 626 5.4760 6.8450 13.6900 818.1417 Constraint 427 634 6.2055 7.7569 15.5137 803.7209 Constraint 146 263 6.1740 7.7176 15.4351 784.1896 Constraint 78 615 6.0160 7.5200 15.0400 779.9537 Constraint 255 319 6.1433 7.6792 15.3583 767.3729 Constraint 36 634 4.9386 6.1732 12.3465 761.3303 Constraint 68 626 6.0273 7.5341 15.0681 718.1193 Constraint 189 502 3.5324 4.4155 8.8311 710.4004 Constraint 173 502 5.7880 7.2350 14.4700 694.2184 Constraint 434 545 5.5261 6.9077 13.8153 676.5391 Constraint 173 255 6.0947 7.6183 15.2366 655.6223 Constraint 374 660 4.3231 5.4039 10.8078 651.7773 Constraint 86 610 5.8323 7.2904 14.5809 643.6940 Constraint 97 601 5.7458 7.1822 14.3645 636.4882 Constraint 68 340 5.4884 6.8605 13.7211 598.5087 Constraint 157 287 5.9752 7.4690 14.9380 591.0728 Constraint 157 280 6.1218 7.6522 15.3045 590.6376 Constraint 62 634 6.0635 7.5793 15.1586 574.0192 Constraint 189 491 4.2096 5.2620 10.5240 571.0886 Constraint 418 615 6.1627 7.7033 15.4066 545.3060 Constraint 43 649 5.9381 7.4226 14.8451 541.0991 Constraint 383 660 5.3483 6.6854 13.3708 532.6342 Constraint 183 526 5.7067 7.1334 14.2668 532.2675 Constraint 189 526 4.7370 5.9212 11.8424 526.1678 Constraint 78 350 6.0196 7.5244 15.0489 525.3599 Constraint 189 483 4.9574 6.1968 12.3936 504.0755 Constraint 54 642 6.0176 7.5219 15.0439 483.5226 Constraint 197 491 4.4627 5.5783 11.1567 477.3752 Constraint 117 312 5.1916 6.4895 12.9790 464.3733 Constraint 391 660 5.1352 6.4190 12.8380 459.4153 Constraint 97 573 5.5784 6.9729 13.9459 455.8980 Constraint 189 512 5.9534 7.4418 14.8836 447.4962 Constraint 223 470 5.1353 6.4191 12.8383 447.1447 Constraint 197 502 5.4672 6.8340 13.6681 431.6452 Constraint 189 517 5.8485 7.3107 14.6213 425.3815 Constraint 17 649 5.1642 6.4553 12.9106 422.6453 Constraint 97 584 5.5599 6.9499 13.8998 422.1902 Constraint 25 649 5.5141 6.8926 13.7853 419.0141 Constraint 434 584 5.5978 6.9972 13.9944 395.4667 Constraint 197 483 5.3177 6.6472 13.2943 332.4717 Constraint 402 551 6.2384 7.7980 15.5961 329.2693 Constraint 206 491 4.7911 5.9888 11.9777 323.6512 Constraint 146 324 6.2056 7.7570 15.5140 315.3061 Constraint 212 470 5.5446 6.9307 13.8615 304.7638 Constraint 117 306 4.6999 5.8749 11.7497 304.4269 Constraint 62 319 6.0744 7.5930 15.1860 290.8599 Constraint 110 593 5.4742 6.8428 13.6856 283.5352 Constraint 189 391 5.5974 6.9967 13.9935 255.8450 Constraint 434 626 5.5997 6.9996 13.9992 219.9523 Constraint 206 502 5.1223 6.4029 12.8058 218.4400 Constraint 43 383 6.1858 7.7322 15.4644 217.2962 Constraint 434 601 6.0618 7.5772 15.1544 216.8894 Constraint 358 660 5.3341 6.6676 13.3352 216.6918 Constraint 183 391 6.2843 7.8554 15.7107 213.5909 Constraint 17 660 5.1414 6.4268 12.8535 207.2144 Constraint 78 329 6.1587 7.6984 15.3968 199.6976 Constraint 234 470 5.8955 7.3694 14.7388 197.7372 Constraint 243 660 5.8610 7.3262 14.6524 187.5123 Constraint 234 410 6.1136 7.6420 15.2840 179.7651 Constraint 86 340 5.8558 7.3198 14.6396 172.7740 Constraint 130 573 6.0974 7.6217 15.2434 166.9935 Constraint 212 483 5.8015 7.2519 14.5037 166.1094 Constraint 117 287 5.7235 7.1543 14.3087 163.1657 Constraint 243 369 6.1275 7.6593 15.3186 158.9417 Constraint 410 626 6.2864 7.8579 15.7159 157.5058 Constraint 183 491 5.7056 7.1320 14.2640 152.4215 Constraint 312 610 6.2270 7.7838 15.5675 152.2596 Constraint 86 329 5.9525 7.4406 14.8812 151.4809 Constraint 117 559 5.2578 6.5722 13.1445 151.1425 Constraint 434 551 5.7746 7.2182 14.4364 148.1059 Constraint 369 660 5.9272 7.4090 14.8181 145.0966 Constraint 402 649 6.0674 7.5842 15.1684 143.9163 Constraint 434 568 5.8144 7.2680 14.5361 133.7890 Constraint 97 306 6.1952 7.7439 15.4879 132.3984 Constraint 17 667 5.7983 7.2478 14.4956 129.8849 Constraint 54 418 6.1715 7.7143 15.4286 124.9089 Constraint 383 626 6.2777 7.8471 15.6942 124.6939 Constraint 212 391 5.9811 7.4763 14.9527 124.3598 Constraint 391 470 6.1832 7.7290 15.4579 122.7785 Constraint 223 491 5.8179 7.2724 14.5447 117.6204 Constraint 146 312 5.7642 7.2053 14.4105 117.2118 Constraint 446 573 5.7636 7.2045 14.4089 111.7549 Constraint 212 502 4.7562 5.9452 11.8905 110.1946 Constraint 340 626 6.1406 7.6758 15.3516 107.2239 Constraint 223 463 5.3553 6.6941 13.3882 104.0760 Constraint 110 584 4.6682 5.8353 11.6706 103.2497 Constraint 223 483 5.6466 7.0582 14.1164 102.6382 Constraint 223 410 4.8500 6.0625 12.1251 100.9728 Constraint 206 512 5.8429 7.3037 14.6074 94.5947 Constraint 189 463 5.9076 7.3845 14.7691 94.0852 Constraint 130 350 6.3105 7.8881 15.7761 93.1612 Constraint 212 491 4.8038 6.0048 12.0095 93.0900 Constraint 25 660 5.7898 7.2373 14.4745 92.8849 Constraint 455 634 6.3081 7.8851 15.7702 92.3122 Constraint 78 146 5.9271 7.4088 14.8177 90.0122 Constraint 551 626 5.9977 7.4972 14.9944 89.8492 Constraint 25 667 5.5594 6.9492 13.8984 88.9882 Constraint 223 391 4.1560 5.1950 10.3900 86.4390 Constraint 197 512 5.0154 6.2692 12.5384 84.8109 Constraint 402 470 6.2377 7.7971 15.5942 82.4804 Constraint 117 551 5.7345 7.1681 14.3363 82.0851 Constraint 374 667 4.9096 6.1370 12.2740 79.6512 Constraint 223 502 5.8144 7.2679 14.5359 79.1289 Constraint 358 642 5.3962 6.7452 13.4904 78.9960 Constraint 234 533 5.7986 7.2482 14.4964 78.8622 Constraint 183 402 6.1260 7.6575 15.3150 78.5287 Constraint 319 626 5.8988 7.3736 14.7471 78.4152 Constraint 43 358 6.0489 7.5611 15.1222 76.1678 Constraint 173 274 5.9116 7.3895 14.7790 74.9913 Constraint 223 402 5.2559 6.5698 13.1397 73.3577 Constraint 234 427 6.2763 7.8453 15.6907 72.7259 Constraint 117 573 5.2733 6.5916 13.1831 71.2620 Constraint 463 626 6.0366 7.5457 15.0914 70.6734 Constraint 62 610 5.7300 7.1625 14.3250 69.0289 Constraint 110 312 5.3737 6.7171 13.4342 67.2193 Constraint 234 491 5.8342 7.2928 14.5856 66.2006 Constraint 183 533 5.9517 7.4396 14.8793 62.4639 Constraint 263 374 5.7905 7.2382 14.4764 56.5433 Constraint 62 383 6.1506 7.6883 15.3766 56.1832 Constraint 183 263 5.7711 7.2138 14.4277 55.8505 Constraint 234 551 5.7100 7.1375 14.2749 55.7547 Constraint 223 649 5.8369 7.2961 14.5922 55.7389 Constraint 206 391 5.5106 6.8883 13.7765 55.6235 Constraint 130 626 5.6229 7.0287 14.0574 55.4587 Constraint 197 470 4.8077 6.0097 12.0193 53.9497 Constraint 117 584 5.3268 6.6585 13.3170 53.8929 Constraint 189 263 5.7286 7.1607 14.3214 53.0775 Constraint 68 319 4.9284 6.1605 12.3209 52.1737 Constraint 86 584 6.0560 7.5700 15.1401 51.6146 Constraint 68 350 5.5784 6.9730 13.9459 51.4240 Constraint 86 615 5.4811 6.8514 13.7027 50.3600 Constraint 86 626 5.4348 6.7935 13.5870 49.7219 Constraint 146 551 5.4184 6.7729 13.5459 49.6139 Constraint 36 418 5.7985 7.2481 14.4962 49.5996 Constraint 97 329 6.3932 7.9915 15.9831 48.1425 Constraint 130 287 6.0733 7.5917 15.1834 47.8078 Constraint 146 402 6.0858 7.6073 15.2145 46.8703 Constraint 68 634 5.4452 6.8065 13.6131 46.6500 Constraint 434 593 6.1298 7.6622 15.3244 45.6835 Constraint 146 626 6.2909 7.8636 15.7272 44.8018 Constraint 68 642 5.1132 6.3915 12.7830 43.9531 Constraint 189 402 4.4506 5.5633 11.1266 42.0975 Constraint 463 551 6.3153 7.8942 15.7883 41.5751 Constraint 234 517 5.9621 7.4526 14.9052 41.4433 Constraint 463 634 6.0516 7.5646 15.1291 40.8843 Constraint 189 533 6.1008 7.6260 15.2519 40.4175 Constraint 206 470 5.1660 6.4576 12.9151 39.9633 Constraint 43 350 5.9092 7.3866 14.7731 39.2283 Constraint 157 369 5.6835 7.1044 14.2087 37.6030 Constraint 86 319 5.1892 6.4865 12.9730 37.4199 Constraint 418 642 4.8747 6.0934 12.1868 36.6968 Constraint 110 306 5.2769 6.5961 13.1923 36.6680 Constraint 97 319 5.9179 7.3973 14.7947 36.1060 Constraint 110 573 5.5080 6.8850 13.7699 34.2100 Constraint 68 312 4.2673 5.3341 10.6683 33.2380 Constraint 130 584 4.8426 6.0532 12.1064 32.5483 Constraint 446 526 4.1867 5.2333 10.4667 32.4368 Constraint 9 660 5.8184 7.2730 14.5460 32.2875 Constraint 43 626 5.7269 7.1587 14.3173 32.1270 Constraint 197 517 6.2814 7.8517 15.7034 31.6139 Constraint 374 673 5.9566 7.4458 14.8915 30.7059 Constraint 418 649 4.2462 5.3078 10.6155 30.6112 Constraint 97 551 6.0286 7.5357 15.0714 29.4101 Constraint 455 526 6.0764 7.5955 15.1910 28.1115 Constraint 446 551 4.4816 5.6020 11.2040 28.1115 Constraint 183 463 4.4576 5.5720 11.1440 28.1115 Constraint 165 463 5.3781 6.7226 13.4453 28.1115 Constraint 427 642 5.1103 6.3879 12.7757 27.5899 Constraint 97 615 5.2425 6.5532 13.1063 26.8435 Constraint 97 340 5.9787 7.4734 14.9468 25.9260 Constraint 86 350 5.5921 6.9901 13.9803 25.9042 Constraint 117 593 5.7223 7.1529 14.3058 25.7745 Constraint 78 593 4.9134 6.1417 12.2835 25.7300 Constraint 157 533 5.2988 6.6235 13.2470 25.6477 Constraint 3 660 4.1781 5.2226 10.4452 25.4862 Constraint 110 559 4.9753 6.2191 12.4382 25.3849 Constraint 434 634 4.9052 6.1315 12.2630 25.3626 Constraint 197 463 5.0978 6.3722 12.7444 25.2921 Constraint 212 526 5.5971 6.9964 13.9928 24.8769 Constraint 212 463 4.6207 5.7759 11.5517 24.8769 Constraint 287 350 6.2063 7.7578 15.5157 23.5890 Constraint 117 568 5.1035 6.3793 12.7587 23.4731 Constraint 54 649 5.2088 6.5110 13.0219 23.2846 Constraint 110 234 4.0657 5.0821 10.1642 22.5589 Constraint 54 350 5.0783 6.3479 12.6958 21.4477 Constraint 43 615 5.2554 6.5693 13.1386 21.4378 Constraint 183 512 6.2764 7.8455 15.6911 20.9440 Constraint 212 410 5.5396 6.9244 13.8489 20.5505 Constraint 86 573 5.2823 6.6029 13.2058 20.4782 Constraint 97 263 3.7371 4.6714 9.3427 20.0531 Constraint 97 255 5.8580 7.3224 14.6449 20.0531 Constraint 97 243 4.2180 5.2725 10.5449 20.0531 Constraint 97 234 5.5442 6.9302 13.8604 20.0531 Constraint 86 263 4.6865 5.8582 11.7164 20.0531 Constraint 86 255 5.0030 6.2537 12.5074 20.0531 Constraint 146 369 5.2679 6.5848 13.1696 19.6845 Constraint 36 660 4.9989 6.2487 12.4973 19.5540 Constraint 25 642 5.5814 6.9767 13.9534 19.5315 Constraint 358 667 4.5435 5.6793 11.3586 19.5078 Constraint 62 601 5.3161 6.6452 13.2904 19.4201 Constraint 427 649 6.2437 7.8046 15.6092 19.3950 Constraint 463 533 5.9588 7.4485 14.8969 19.3786 Constraint 78 642 5.3243 6.6553 13.3107 19.3399 Constraint 197 391 4.2285 5.2856 10.5712 19.2218 Constraint 78 306 5.0597 6.3247 12.6494 19.2141 Constraint 17 391 4.8550 6.0688 12.1375 19.1641 Constraint 86 306 4.8594 6.0742 12.1484 18.8974 Constraint 223 455 5.0347 6.2933 12.5867 18.8368 Constraint 86 551 5.9833 7.4791 14.9582 18.4654 Constraint 212 649 4.4095 5.5119 11.0238 18.3879 Constraint 54 340 4.1214 5.1518 10.3035 18.3263 Constraint 146 295 6.3807 7.9758 15.9517 17.9104 Constraint 427 517 5.5104 6.8880 13.7761 17.8596 Constraint 446 533 6.1718 7.7148 15.4295 17.5569 Constraint 78 274 4.2079 5.2599 10.5197 17.5473 Constraint 78 263 4.2167 5.2709 10.5418 17.5473 Constraint 78 255 5.3115 6.6394 13.2788 17.5473 Constraint 165 287 5.4834 6.8543 13.7086 16.9093 Constraint 157 319 3.8355 4.7944 9.5888 16.9093 Constraint 157 306 4.5068 5.6335 11.2670 16.9093 Constraint 78 634 5.0138 6.2673 12.5345 16.8222 Constraint 110 287 5.5987 6.9984 13.9968 16.2672 Constraint 68 434 5.7534 7.1918 14.3836 15.9197 Constraint 197 402 5.6835 7.1044 14.2088 15.8869 Constraint 110 568 5.9290 7.4112 14.8224 15.8379 Constraint 173 526 5.9634 7.4543 14.9086 15.8354 Constraint 130 559 5.5598 6.9497 13.8994 15.6825 Constraint 97 502 6.1000 7.6250 15.2500 15.6519 Constraint 86 533 5.3504 6.6880 13.3760 15.6519 Constraint 86 526 5.0786 6.3483 12.6966 15.6519 Constraint 86 502 5.7608 7.2010 14.4020 15.6519 Constraint 86 402 5.0747 6.3433 12.6867 15.6519 Constraint 86 243 5.2376 6.5470 13.0939 15.6519 Constraint 86 234 4.4165 5.5207 11.0413 15.6519 Constraint 455 649 6.2881 7.8601 15.7202 15.6437 Constraint 130 642 6.3805 7.9757 15.9514 15.6437 Constraint 165 427 6.2320 7.7900 15.5800 15.5311 Constraint 130 427 6.2320 7.7899 15.5799 15.5311 Constraint 391 667 4.8936 6.1170 12.2339 15.1855 Constraint 78 573 6.2433 7.8041 15.6082 14.9959 Constraint 189 470 6.1723 7.7154 15.4307 14.7205 Constraint 110 526 4.5329 5.6661 11.3322 14.4243 Constraint 110 502 3.7416 4.6770 9.3541 14.4243 Constraint 165 280 5.5194 6.8992 13.7984 14.3974 Constraint 402 483 6.3400 7.9249 15.8499 14.3471 Constraint 340 610 6.2584 7.8230 15.6461 14.3471 Constraint 110 329 5.6803 7.1004 14.2009 14.2702 Constraint 183 470 5.3756 6.7195 13.4390 14.0675 Constraint 146 358 6.3136 7.8919 15.7839 14.0675 Constraint 130 295 6.3471 7.9338 15.8677 14.0675 Constraint 446 540 6.1182 7.6478 15.2955 14.0440 Constraint 130 434 6.0791 7.5988 15.1977 14.0440 Constraint 97 434 5.1630 6.4537 12.9074 14.0440 Constraint 86 324 5.7985 7.2481 14.4962 14.0440 Constraint 78 434 5.3470 6.6837 13.3675 14.0440 Constraint 206 526 5.4899 6.8624 13.7248 13.6944 Constraint 206 483 4.9498 6.1873 12.3746 13.6944 Constraint 206 463 4.6836 5.8545 11.7089 13.6944 Constraint 97 559 5.9082 7.3853 14.7706 13.6329 Constraint 374 680 5.5242 6.9052 13.8105 13.2116 Constraint 110 601 4.0023 5.0029 10.0058 13.0133 Constraint 97 626 5.1625 6.4531 12.9062 13.0133 Constraint 68 306 5.0692 6.3365 12.6730 12.8410 Constraint 68 287 5.2860 6.6075 13.2151 12.8410 Constraint 68 280 4.4953 5.6191 11.2382 12.8410 Constraint 78 427 5.8584 7.3230 14.6460 12.7176 Constraint 197 383 5.6114 7.0143 14.0286 12.7095 Constraint 197 374 5.6613 7.0766 14.1531 12.7095 Constraint 391 463 6.3706 7.9632 15.9265 12.5805 Constraint 117 223 5.2750 6.5937 13.1874 12.5358 Constraint 110 243 3.6929 4.6161 9.2322 12.5358 Constraint 110 223 6.0946 7.6182 15.2365 12.5358 Constraint 183 255 5.2368 6.5460 13.0920 12.4592 Constraint 62 312 4.2970 5.3712 10.7425 12.3848 Constraint 165 274 4.5498 5.6872 11.3744 12.3499 Constraint 17 374 5.7913 7.2391 14.4782 12.2975 Constraint 255 649 5.9462 7.4328 14.8655 11.5497 Constraint 130 615 4.8513 6.0641 12.1282 11.5497 Constraint 62 427 6.3681 7.9601 15.9202 11.2540 Constraint 62 402 6.3564 7.9456 15.8911 11.2540 Constraint 25 634 5.4418 6.8022 13.6044 11.0910 Constraint 183 483 5.0969 6.3711 12.7422 10.8833 Constraint 62 649 5.5696 6.9621 13.9241 10.7480 Constraint 68 274 5.5851 6.9814 13.9627 10.6404 Constraint 68 263 6.3030 7.8787 15.7575 10.6404 Constraint 68 255 4.3671 5.4588 10.9177 10.6404 Constraint 165 319 3.4245 4.2807 8.5613 10.5545 Constraint 165 312 4.7747 5.9684 11.9367 10.5545 Constraint 165 306 4.1163 5.1454 10.2909 10.5545 Constraint 157 312 4.2299 5.2874 10.5747 10.5545 Constraint 68 324 6.1100 7.6375 15.2750 10.3352 Constraint 110 517 5.5656 6.9570 13.9140 10.0231 Constraint 110 512 6.3060 7.8825 15.7649 10.0231 Constraint 110 491 3.9991 4.9989 9.9978 10.0231 Constraint 110 483 4.1884 5.2355 10.4710 10.0231 Constraint 110 463 5.9010 7.3762 14.7524 10.0231 Constraint 17 642 4.9997 6.2496 12.4993 9.6943 Constraint 358 680 5.7544 7.1930 14.3860 9.5992 Constraint 43 410 6.1434 7.6793 15.3585 9.5839 Constraint 78 280 5.1419 6.4274 12.8547 9.4127 Constraint 350 649 5.1832 6.4791 12.9581 9.2762 Constraint 117 601 5.4811 6.8514 13.7027 9.2242 Constraint 17 212 5.1764 6.4705 12.9410 9.1939 Constraint 197 526 5.3433 6.6791 13.3581 9.1725 Constraint 36 667 5.3066 6.6332 13.2665 8.9382 Constraint 78 559 5.8014 7.2517 14.5035 8.2694 Constraint 206 649 5.0757 6.3446 12.6891 8.2661 Constraint 130 212 6.1455 7.6819 15.3637 8.1346 Constraint 130 206 3.9126 4.8907 9.7815 8.1346 Constraint 117 212 5.1711 6.4638 12.9277 8.1346 Constraint 117 206 3.6081 4.5101 9.0202 8.1346 Constraint 110 391 5.9365 7.4206 14.8413 8.1346 Constraint 410 660 3.9013 4.8767 9.7533 8.0281 Constraint 319 634 5.8476 7.3095 14.6189 7.9325 Constraint 43 512 5.1552 6.4440 12.8880 7.7747 Constraint 183 374 4.9220 6.1525 12.3050 7.7360 Constraint 197 369 6.3610 7.9512 15.9024 7.6857 Constraint 427 533 3.9269 4.9087 9.8174 7.6856 Constraint 427 512 5.1840 6.4800 12.9600 7.6856 Constraint 402 512 5.0280 6.2850 12.5701 7.6856 Constraint 234 512 3.9202 4.9002 9.8005 7.6856 Constraint 243 483 5.4400 6.8001 13.6001 7.6656 Constraint 545 615 5.8355 7.2943 14.5887 7.6168 Constraint 62 329 6.0764 7.5955 15.1910 7.5804 Constraint 146 502 5.6097 7.0121 14.0241 7.5111 Constraint 117 533 6.2456 7.8070 15.6139 7.5111 Constraint 243 502 5.8648 7.3310 14.6620 7.4096 Constraint 369 673 6.3335 7.9168 15.8337 7.3443 Constraint 358 673 4.8450 6.0563 12.1125 7.3443 Constraint 54 610 5.4957 6.8697 13.7394 7.1258 Constraint 25 410 5.8928 7.3659 14.7319 7.0237 Constraint 25 680 5.2414 6.5517 13.1035 7.0227 Constraint 43 660 5.5850 6.9812 13.9625 6.9128 Constraint 43 418 5.9167 7.3958 14.7916 6.8955 Constraint 62 418 6.0600 7.5750 15.1501 6.7517 Constraint 206 410 5.5563 6.9453 13.8907 6.6697 Constraint 369 680 3.9838 4.9797 9.9594 6.6065 Constraint 280 340 4.8059 6.0073 12.0147 6.6018 Constraint 427 540 5.8655 7.3319 14.6638 6.5740 Constraint 86 634 6.0745 7.5932 15.1863 6.4555 Constraint 173 402 5.1624 6.4530 12.9060 6.3548 Constraint 157 350 4.5419 5.6774 11.3548 6.3548 Constraint 68 329 6.3326 7.9157 15.8314 6.3169 Constraint 62 306 3.2936 4.1170 8.2340 6.2679 Constraint 551 634 6.0853 7.6066 15.2131 6.2198 Constraint 146 634 6.3241 7.9051 15.8101 6.2198 Constraint 130 634 5.5965 6.9957 13.9913 6.2198 Constraint 36 540 6.1386 7.6732 15.3465 6.2198 Constraint 36 110 6.2123 7.7654 15.5308 6.2198 Constraint 78 584 5.0886 6.3608 12.7215 6.1169 Constraint 68 593 5.4296 6.7870 13.5739 6.1169 Constraint 62 130 4.4845 5.6056 11.2111 6.1169 Constraint 54 319 5.7561 7.1951 14.3902 6.1109 Constraint 157 551 5.4139 6.7673 13.5346 6.0337 Constraint 183 551 5.6396 7.0495 14.0990 5.9952 Constraint 173 533 6.1916 7.7395 15.4789 5.9952 Constraint 165 350 5.2929 6.6161 13.2322 5.9952 Constraint 157 324 5.2619 6.5774 13.1548 5.9952 Constraint 157 295 6.2037 7.7546 15.5092 5.9952 Constraint 146 615 5.1860 6.4825 12.9650 5.9952 Constraint 110 551 5.7812 7.2265 14.4531 5.9425 Constraint 350 634 5.8190 7.2737 14.5474 5.9111 Constraint 110 610 5.5707 6.9634 13.9269 5.8755 Constraint 173 287 5.4583 6.8229 13.6457 5.8153 Constraint 25 691 5.3122 6.6402 13.2804 5.8059 Constraint 540 610 5.8505 7.3132 14.6264 5.3111 Constraint 36 680 5.9201 7.4002 14.8004 5.2445 Constraint 223 660 5.8074 7.2592 14.5184 5.2146 Constraint 54 601 6.1098 7.6373 15.2745 5.0921 Constraint 287 369 3.7489 4.6862 9.3723 5.0516 Constraint 3 358 6.3214 7.9017 15.8034 4.8557 Constraint 369 667 6.0829 7.6037 15.2074 4.8167 Constraint 9 673 4.9057 6.1321 12.2642 4.7502 Constraint 130 526 6.0037 7.5046 15.0093 4.7096 Constraint 157 502 5.6037 7.0046 14.0092 4.5842 Constraint 157 243 4.9224 6.1530 12.3060 4.5842 Constraint 157 234 5.5148 6.8935 13.7870 4.5842 Constraint 130 280 4.9565 6.1956 12.3912 4.5842 Constraint 183 280 6.2188 7.7735 15.5470 4.5593 Constraint 183 274 3.6730 4.5912 9.1824 4.5593 Constraint 173 350 4.4955 5.6194 11.2388 4.5593 Constraint 173 324 6.1972 7.7465 15.4930 4.5593 Constraint 173 319 3.0949 3.8687 7.7373 4.5593 Constraint 173 312 6.3620 7.9524 15.9049 4.5593 Constraint 173 306 5.4339 6.7924 13.5847 4.5593 Constraint 173 280 3.6889 4.6111 9.2221 4.5593 Constraint 165 324 5.2442 6.5552 13.1104 4.5593 Constraint 157 610 5.0063 6.2579 12.5158 4.5593 Constraint 146 559 5.9834 7.4793 14.9585 4.5593 Constraint 117 610 6.3963 7.9953 15.9907 4.5593 Constraint 110 340 6.1085 7.6356 15.2712 4.5593 Constraint 86 642 5.0519 6.3149 12.6297 4.5593 Constraint 86 383 6.3555 7.9443 15.8886 4.5593 Constraint 68 649 6.3952 7.9940 15.9879 4.5593 Constraint 68 383 5.9760 7.4700 14.9399 4.5593 Constraint 243 667 5.8565 7.3206 14.6413 4.5060 Constraint 383 667 5.3373 6.6716 13.3433 4.4781 Constraint 358 649 4.9818 6.2272 12.4544 4.4664 Constraint 427 584 6.3380 7.9225 15.8450 4.4465 Constraint 183 369 6.3136 7.8920 15.7840 4.4012 Constraint 130 512 6.1408 7.6760 15.3520 4.4012 Constraint 130 502 4.4065 5.5081 11.0162 4.4012 Constraint 130 491 4.6029 5.7536 11.5072 4.4012 Constraint 117 526 3.8577 4.8222 9.6444 4.4012 Constraint 117 517 5.9122 7.3903 14.7805 4.4012 Constraint 117 512 6.0114 7.5142 15.0285 4.4012 Constraint 117 502 2.3816 2.9771 5.9541 4.4012 Constraint 117 491 4.5164 5.6454 11.2909 4.4012 Constraint 117 483 4.6052 5.7564 11.5129 4.4012 Constraint 117 234 4.3567 5.4459 10.8918 4.4012 Constraint 97 533 5.6529 7.0661 14.1323 4.4012 Constraint 97 526 5.4742 6.8428 13.6856 4.4012 Constraint 97 402 5.6587 7.0733 14.1467 4.4012 Constraint 97 350 5.8965 7.3706 14.7412 4.4012 Constraint 86 280 6.2832 7.8540 15.7079 4.4012 Constraint 86 274 3.2612 4.0765 8.1530 4.4012 Constraint 78 287 5.2842 6.6052 13.2104 4.4012 Constraint 391 680 6.0721 7.5901 15.1802 4.3066 Constraint 434 533 5.9488 7.4360 14.8721 4.2584 Constraint 173 391 5.9050 7.3812 14.7624 4.2215 Constraint 25 673 4.8134 6.0167 12.0334 4.1595 Constraint 78 165 6.0930 7.6162 15.2324 4.0990 Constraint 62 324 4.6918 5.8647 11.7295 4.0673 Constraint 62 287 3.3323 4.1653 8.3306 4.0673 Constraint 62 280 4.9689 6.2112 12.4223 4.0673 Constraint 43 610 6.2359 7.7948 15.5896 4.0673 Constraint 43 340 5.9183 7.3978 14.7956 4.0673 Constraint 36 626 5.9884 7.4855 14.9711 4.0673 Constraint 36 615 5.2324 6.5405 13.0809 4.0673 Constraint 25 383 6.3435 7.9294 15.8587 4.0673 Constraint 17 634 4.9386 6.1733 12.3466 4.0673 Constraint 17 410 5.9619 7.4524 14.9048 4.0673 Constraint 9 691 5.1176 6.3970 12.7939 3.9115 Constraint 434 642 6.2151 7.7688 15.5377 3.7513 Constraint 97 295 4.9762 6.2202 12.4404 3.7513 Constraint 280 383 6.2475 7.8094 15.6188 3.5318 Constraint 197 649 4.2133 5.2666 10.5333 3.1232 Constraint 146 533 5.7317 7.1646 14.3292 3.1099 Constraint 146 526 4.9583 6.1978 12.3956 3.1099 Constraint 146 243 5.1678 6.4598 12.9195 3.1099 Constraint 146 234 4.5129 5.6411 11.2821 3.1099 Constraint 130 402 6.3936 7.9920 15.9839 3.1099 Constraint 130 255 4.1437 5.1797 10.3593 3.1099 Constraint 78 512 5.1596 6.4495 12.8989 3.1099 Constraint 68 559 5.5843 6.9803 13.9607 3.1099 Constraint 68 540 6.0994 7.6242 15.2485 3.1099 Constraint 36 512 5.2158 6.5197 13.0395 3.1099 Constraint 25 540 6.1059 7.6324 15.2649 3.1099 Constraint 17 673 5.4100 6.7625 13.5250 3.0728 Constraint 54 383 5.8998 7.3747 14.7495 2.9486 Constraint 212 660 4.8873 6.1092 12.2184 2.8707 Constraint 418 660 6.0805 7.6006 15.2012 2.8135 Constraint 86 434 6.0994 7.6242 15.2485 2.8135 Constraint 68 427 5.4537 6.8172 13.6344 2.8135 Constraint 446 517 5.6351 7.0439 14.0877 2.7541 Constraint 206 660 6.0536 7.5670 15.1341 2.6813 Constraint 446 568 6.1430 7.6788 15.3575 2.6093 Constraint 410 680 6.0770 7.5962 15.1925 2.5472 Constraint 9 667 6.0437 7.5546 15.1093 2.5161 Constraint 146 329 6.3543 7.9429 15.8857 2.5119 Constraint 9 649 3.8790 4.8488 9.6976 2.2985 Constraint 9 212 5.1398 6.4247 12.8494 2.2985 Constraint 62 410 6.1019 7.6273 15.2547 2.2797 Constraint 17 680 4.8447 6.0558 12.1117 2.2341 Constraint 9 680 5.6822 7.1027 14.2055 2.2341 Constraint 3 691 5.3740 6.7176 13.4351 2.2341 Constraint 3 680 5.7308 7.1635 14.3271 2.2341 Constraint 3 673 4.1746 5.2183 10.4366 2.2341 Constraint 427 601 4.3661 5.4576 10.9152 2.2232 Constraint 427 502 5.5652 6.9565 13.9130 2.2232 Constraint 402 615 4.4194 5.5243 11.0486 2.2232 Constraint 391 634 4.8956 6.1195 12.2389 2.2232 Constraint 383 634 3.4898 4.3622 8.7244 2.2232 Constraint 350 615 5.6343 7.0428 14.0857 2.2232 Constraint 340 615 6.1113 7.6391 15.2782 2.2232 Constraint 255 634 6.1992 7.7490 15.4980 2.2232 Constraint 197 660 4.7454 5.9317 11.8634 2.2232 Constraint 189 649 4.7709 5.9636 11.9272 2.2232 Constraint 189 374 6.3196 7.8995 15.7990 2.2232 Constraint 183 660 5.7251 7.1563 14.3127 2.2232 Constraint 173 374 6.0676 7.5845 15.1689 2.2232 Constraint 130 243 6.0864 7.6080 15.2160 2.2232 Constraint 62 551 5.4115 6.7644 13.5288 2.2006 Constraint 54 410 6.1514 7.6893 15.3786 2.2006 Constraint 212 455 6.3672 7.9590 15.9181 2.1626 Constraint 62 573 6.2146 7.7683 15.5366 2.0496 Constraint 54 584 4.6558 5.8198 11.6396 2.0337 Constraint 54 551 5.2900 6.6125 13.2249 2.0337 Constraint 54 312 4.6901 5.8626 11.7252 2.0337 Constraint 54 306 6.1321 7.6651 15.3302 2.0337 Constraint 455 642 6.1712 7.7140 15.4280 1.9751 Constraint 86 165 6.0829 7.6037 15.2074 1.8961 Constraint 533 610 6.2055 7.7569 15.5137 1.8838 Constraint 43 540 6.0424 7.5530 15.1060 1.5549 Constraint 157 526 4.5320 5.6650 11.3300 1.4743 Constraint 157 402 5.8554 7.3192 14.6385 1.4743 Constraint 130 324 6.0023 7.5029 15.0057 1.4743 Constraint 470 680 4.8678 6.0848 12.1696 1.4355 Constraint 434 517 5.6185 7.0232 14.0463 1.3970 Constraint 427 491 4.3955 5.4944 10.9887 1.3970 Constraint 402 491 5.9654 7.4567 14.9134 1.3970 Constraint 383 673 5.1624 6.4530 12.9059 1.2924 Constraint 434 559 6.3833 7.9791 15.9583 1.2629 Constraint 206 402 4.2019 5.2524 10.5049 1.2560 Constraint 374 649 5.1481 6.4352 12.8703 1.1116 Constraint 206 642 4.6704 5.8380 11.6760 1.1116 Constraint 206 374 6.1790 7.7237 15.4474 1.1116 Constraint 197 667 6.2887 7.8609 15.7219 1.1116 Constraint 197 410 5.5118 6.8897 13.7794 1.1116 Constraint 189 660 4.6794 5.8492 11.6984 1.1116 Constraint 189 642 3.4904 4.3630 8.7261 1.1116 Constraint 165 374 6.2443 7.8054 15.6108 1.1116 Constraint 9 86 3.7346 4.6682 9.3365 1.1116 Constraint 173 551 6.3042 7.8802 15.7605 0.9419 Constraint 173 483 4.5313 5.6641 11.3282 0.9419 Constraint 165 517 6.0189 7.5236 15.0472 0.9419 Constraint 165 512 4.5344 5.6680 11.3359 0.9419 Constraint 165 483 3.4279 4.2849 8.5698 0.9419 Constraint 130 540 5.7537 7.1921 14.3842 0.9419 Constraint 117 545 4.9786 6.2233 12.4466 0.9419 Constraint 117 540 6.3867 7.9834 15.9667 0.9419 Constraint 43 691 6.2350 7.7938 15.5875 0.9378 Constraint 36 673 4.8800 6.1000 12.1999 0.9378 Constraint 483 559 5.4410 6.8012 13.6024 0.7848 Constraint 483 551 4.7194 5.8992 11.7985 0.7848 Constraint 470 545 4.3097 5.3872 10.7744 0.7848 Constraint 234 545 5.0592 6.3241 12.6481 0.7848 Constraint 418 545 6.3001 7.8751 15.7502 0.7689 Constraint 36 391 6.1864 7.7330 15.4661 0.7689 Constraint 470 649 5.8289 7.2861 14.5722 0.6866 Constraint 255 626 6.2876 7.8595 15.7191 0.6705 Constraint 427 568 5.8521 7.3151 14.6301 0.6488 Constraint 402 545 5.9886 7.4857 14.9715 0.6488 Constraint 312 601 6.1620 7.7025 15.4050 0.6488 Constraint 312 593 6.3952 7.9940 15.9880 0.6488 Constraint 243 649 5.7524 7.1905 14.3811 0.6488 Constraint 243 642 5.9576 7.4470 14.8941 0.6488 Constraint 78 551 6.3588 7.9484 15.8969 0.6488 Constraint 369 642 6.3892 7.9865 15.9730 0.6337 Constraint 274 358 5.7515 7.1894 14.3789 0.6337 Constraint 340 634 6.1631 7.7038 15.4077 0.6315 Constraint 470 660 6.1589 7.6987 15.3974 0.5722 Constraint 206 517 6.2093 7.7616 15.5231 0.4325 Constraint 610 691 6.3427 7.9284 15.8568 0.3924 Constraint 610 673 4.1758 5.2197 10.4394 0.3924 Constraint 601 680 4.6637 5.8297 11.6593 0.3924 Constraint 601 673 5.4811 6.8513 13.7026 0.3924 Constraint 593 691 3.3943 4.2428 8.4856 0.3924 Constraint 593 680 5.4826 6.8533 13.7066 0.3924 Constraint 593 673 5.3121 6.6402 13.2803 0.3924 Constraint 584 691 4.2720 5.3400 10.6799 0.3924 Constraint 584 680 5.0225 6.2782 12.5564 0.3924 Constraint 573 691 5.1863 6.4829 12.9657 0.3924 Constraint 463 573 6.0131 7.5164 15.0328 0.3924 Constraint 340 673 4.7238 5.9047 11.8094 0.3924 Constraint 329 680 6.3609 7.9511 15.9022 0.3924 Constraint 329 673 6.3451 7.9314 15.8628 0.3924 Constraint 312 691 5.6004 7.0005 14.0009 0.3924 Constraint 312 680 5.3565 6.6956 13.3912 0.3924 Constraint 312 673 4.2474 5.3092 10.6184 0.3924 Constraint 626 691 5.8654 7.3317 14.6635 0.3157 Constraint 615 691 3.7431 4.6789 9.3578 0.3157 Constraint 212 667 4.4388 5.5485 11.0970 0.2289 Constraint 206 667 6.1876 7.7344 15.4689 0.2289 Constraint 680 691 0.8000 1.0000 2.0000 0.0000 Constraint 673 691 0.8000 1.0000 2.0000 0.0000 Constraint 673 680 0.8000 1.0000 2.0000 0.0000 Constraint 667 691 0.8000 1.0000 2.0000 0.0000 Constraint 667 680 0.8000 1.0000 2.0000 0.0000 Constraint 667 673 0.8000 1.0000 2.0000 0.0000 Constraint 660 691 0.8000 1.0000 2.0000 0.0000 Constraint 660 680 0.8000 1.0000 2.0000 0.0000 Constraint 660 673 0.8000 1.0000 2.0000 0.0000 Constraint 660 667 0.8000 1.0000 2.0000 0.0000 Constraint 649 691 0.8000 1.0000 2.0000 0.0000 Constraint 649 680 0.8000 1.0000 2.0000 0.0000 Constraint 649 673 0.8000 1.0000 2.0000 0.0000 Constraint 649 667 0.8000 1.0000 2.0000 0.0000 Constraint 649 660 0.8000 1.0000 2.0000 0.0000 Constraint 642 691 0.8000 1.0000 2.0000 0.0000 Constraint 642 680 0.8000 1.0000 2.0000 0.0000 Constraint 642 673 0.8000 1.0000 2.0000 0.0000 Constraint 642 667 0.8000 1.0000 2.0000 0.0000 Constraint 642 660 0.8000 1.0000 2.0000 0.0000 Constraint 642 649 0.8000 1.0000 2.0000 0.0000 Constraint 634 691 0.8000 1.0000 2.0000 0.0000 Constraint 634 680 0.8000 1.0000 2.0000 0.0000 Constraint 634 673 0.8000 1.0000 2.0000 0.0000 Constraint 634 667 0.8000 1.0000 2.0000 0.0000 Constraint 634 660 0.8000 1.0000 2.0000 0.0000 Constraint 634 649 0.8000 1.0000 2.0000 0.0000 Constraint 634 642 0.8000 1.0000 2.0000 0.0000 Constraint 626 680 0.8000 1.0000 2.0000 0.0000 Constraint 626 673 0.8000 1.0000 2.0000 0.0000 Constraint 626 667 0.8000 1.0000 2.0000 0.0000 Constraint 626 660 0.8000 1.0000 2.0000 0.0000 Constraint 626 649 0.8000 1.0000 2.0000 0.0000 Constraint 626 642 0.8000 1.0000 2.0000 0.0000 Constraint 626 634 0.8000 1.0000 2.0000 0.0000 Constraint 615 680 0.8000 1.0000 2.0000 0.0000 Constraint 615 673 0.8000 1.0000 2.0000 0.0000 Constraint 615 667 0.8000 1.0000 2.0000 0.0000 Constraint 615 660 0.8000 1.0000 2.0000 0.0000 Constraint 615 649 0.8000 1.0000 2.0000 0.0000 Constraint 615 642 0.8000 1.0000 2.0000 0.0000 Constraint 615 634 0.8000 1.0000 2.0000 0.0000 Constraint 615 626 0.8000 1.0000 2.0000 0.0000 Constraint 610 680 0.8000 1.0000 2.0000 0.0000 Constraint 610 667 0.8000 1.0000 2.0000 0.0000 Constraint 610 660 0.8000 1.0000 2.0000 0.0000 Constraint 610 649 0.8000 1.0000 2.0000 0.0000 Constraint 610 642 0.8000 1.0000 2.0000 0.0000 Constraint 610 634 0.8000 1.0000 2.0000 0.0000 Constraint 610 626 0.8000 1.0000 2.0000 0.0000 Constraint 610 615 0.8000 1.0000 2.0000 0.0000 Constraint 601 691 0.8000 1.0000 2.0000 0.0000 Constraint 601 667 0.8000 1.0000 2.0000 0.0000 Constraint 601 660 0.8000 1.0000 2.0000 0.0000 Constraint 601 649 0.8000 1.0000 2.0000 0.0000 Constraint 601 642 0.8000 1.0000 2.0000 0.0000 Constraint 601 634 0.8000 1.0000 2.0000 0.0000 Constraint 601 626 0.8000 1.0000 2.0000 0.0000 Constraint 601 615 0.8000 1.0000 2.0000 0.0000 Constraint 601 610 0.8000 1.0000 2.0000 0.0000 Constraint 593 667 0.8000 1.0000 2.0000 0.0000 Constraint 593 660 0.8000 1.0000 2.0000 0.0000 Constraint 593 649 0.8000 1.0000 2.0000 0.0000 Constraint 593 642 0.8000 1.0000 2.0000 0.0000 Constraint 593 634 0.8000 1.0000 2.0000 0.0000 Constraint 593 626 0.8000 1.0000 2.0000 0.0000 Constraint 593 615 0.8000 1.0000 2.0000 0.0000 Constraint 593 610 0.8000 1.0000 2.0000 0.0000 Constraint 593 601 0.8000 1.0000 2.0000 0.0000 Constraint 584 673 0.8000 1.0000 2.0000 0.0000 Constraint 584 667 0.8000 1.0000 2.0000 0.0000 Constraint 584 660 0.8000 1.0000 2.0000 0.0000 Constraint 584 649 0.8000 1.0000 2.0000 0.0000 Constraint 584 642 0.8000 1.0000 2.0000 0.0000 Constraint 584 634 0.8000 1.0000 2.0000 0.0000 Constraint 584 626 0.8000 1.0000 2.0000 0.0000 Constraint 584 615 0.8000 1.0000 2.0000 0.0000 Constraint 584 610 0.8000 1.0000 2.0000 0.0000 Constraint 584 601 0.8000 1.0000 2.0000 0.0000 Constraint 584 593 0.8000 1.0000 2.0000 0.0000 Constraint 573 680 0.8000 1.0000 2.0000 0.0000 Constraint 573 673 0.8000 1.0000 2.0000 0.0000 Constraint 573 667 0.8000 1.0000 2.0000 0.0000 Constraint 573 660 0.8000 1.0000 2.0000 0.0000 Constraint 573 649 0.8000 1.0000 2.0000 0.0000 Constraint 573 642 0.8000 1.0000 2.0000 0.0000 Constraint 573 634 0.8000 1.0000 2.0000 0.0000 Constraint 573 626 0.8000 1.0000 2.0000 0.0000 Constraint 573 615 0.8000 1.0000 2.0000 0.0000 Constraint 573 610 0.8000 1.0000 2.0000 0.0000 Constraint 573 601 0.8000 1.0000 2.0000 0.0000 Constraint 573 593 0.8000 1.0000 2.0000 0.0000 Constraint 573 584 0.8000 1.0000 2.0000 0.0000 Constraint 568 691 0.8000 1.0000 2.0000 0.0000 Constraint 568 680 0.8000 1.0000 2.0000 0.0000 Constraint 568 673 0.8000 1.0000 2.0000 0.0000 Constraint 568 667 0.8000 1.0000 2.0000 0.0000 Constraint 568 660 0.8000 1.0000 2.0000 0.0000 Constraint 568 649 0.8000 1.0000 2.0000 0.0000 Constraint 568 642 0.8000 1.0000 2.0000 0.0000 Constraint 568 634 0.8000 1.0000 2.0000 0.0000 Constraint 568 626 0.8000 1.0000 2.0000 0.0000 Constraint 568 615 0.8000 1.0000 2.0000 0.0000 Constraint 568 610 0.8000 1.0000 2.0000 0.0000 Constraint 568 601 0.8000 1.0000 2.0000 0.0000 Constraint 568 593 0.8000 1.0000 2.0000 0.0000 Constraint 568 584 0.8000 1.0000 2.0000 0.0000 Constraint 568 573 0.8000 1.0000 2.0000 0.0000 Constraint 559 691 0.8000 1.0000 2.0000 0.0000 Constraint 559 680 0.8000 1.0000 2.0000 0.0000 Constraint 559 673 0.8000 1.0000 2.0000 0.0000 Constraint 559 667 0.8000 1.0000 2.0000 0.0000 Constraint 559 660 0.8000 1.0000 2.0000 0.0000 Constraint 559 649 0.8000 1.0000 2.0000 0.0000 Constraint 559 642 0.8000 1.0000 2.0000 0.0000 Constraint 559 634 0.8000 1.0000 2.0000 0.0000 Constraint 559 626 0.8000 1.0000 2.0000 0.0000 Constraint 559 615 0.8000 1.0000 2.0000 0.0000 Constraint 559 610 0.8000 1.0000 2.0000 0.0000 Constraint 559 601 0.8000 1.0000 2.0000 0.0000 Constraint 559 593 0.8000 1.0000 2.0000 0.0000 Constraint 559 584 0.8000 1.0000 2.0000 0.0000 Constraint 559 573 0.8000 1.0000 2.0000 0.0000 Constraint 559 568 0.8000 1.0000 2.0000 0.0000 Constraint 551 691 0.8000 1.0000 2.0000 0.0000 Constraint 551 680 0.8000 1.0000 2.0000 0.0000 Constraint 551 673 0.8000 1.0000 2.0000 0.0000 Constraint 551 667 0.8000 1.0000 2.0000 0.0000 Constraint 551 660 0.8000 1.0000 2.0000 0.0000 Constraint 551 649 0.8000 1.0000 2.0000 0.0000 Constraint 551 642 0.8000 1.0000 2.0000 0.0000 Constraint 551 615 0.8000 1.0000 2.0000 0.0000 Constraint 551 610 0.8000 1.0000 2.0000 0.0000 Constraint 551 601 0.8000 1.0000 2.0000 0.0000 Constraint 551 593 0.8000 1.0000 2.0000 0.0000 Constraint 551 584 0.8000 1.0000 2.0000 0.0000 Constraint 551 573 0.8000 1.0000 2.0000 0.0000 Constraint 551 568 0.8000 1.0000 2.0000 0.0000 Constraint 551 559 0.8000 1.0000 2.0000 0.0000 Constraint 545 691 0.8000 1.0000 2.0000 0.0000 Constraint 545 680 0.8000 1.0000 2.0000 0.0000 Constraint 545 673 0.8000 1.0000 2.0000 0.0000 Constraint 545 667 0.8000 1.0000 2.0000 0.0000 Constraint 545 660 0.8000 1.0000 2.0000 0.0000 Constraint 545 649 0.8000 1.0000 2.0000 0.0000 Constraint 545 642 0.8000 1.0000 2.0000 0.0000 Constraint 545 634 0.8000 1.0000 2.0000 0.0000 Constraint 545 626 0.8000 1.0000 2.0000 0.0000 Constraint 545 610 0.8000 1.0000 2.0000 0.0000 Constraint 545 601 0.8000 1.0000 2.0000 0.0000 Constraint 545 593 0.8000 1.0000 2.0000 0.0000 Constraint 545 584 0.8000 1.0000 2.0000 0.0000 Constraint 545 573 0.8000 1.0000 2.0000 0.0000 Constraint 545 568 0.8000 1.0000 2.0000 0.0000 Constraint 545 559 0.8000 1.0000 2.0000 0.0000 Constraint 545 551 0.8000 1.0000 2.0000 0.0000 Constraint 540 691 0.8000 1.0000 2.0000 0.0000 Constraint 540 680 0.8000 1.0000 2.0000 0.0000 Constraint 540 673 0.8000 1.0000 2.0000 0.0000 Constraint 540 667 0.8000 1.0000 2.0000 0.0000 Constraint 540 660 0.8000 1.0000 2.0000 0.0000 Constraint 540 649 0.8000 1.0000 2.0000 0.0000 Constraint 540 642 0.8000 1.0000 2.0000 0.0000 Constraint 540 634 0.8000 1.0000 2.0000 0.0000 Constraint 540 626 0.8000 1.0000 2.0000 0.0000 Constraint 540 615 0.8000 1.0000 2.0000 0.0000 Constraint 540 601 0.8000 1.0000 2.0000 0.0000 Constraint 540 593 0.8000 1.0000 2.0000 0.0000 Constraint 540 584 0.8000 1.0000 2.0000 0.0000 Constraint 540 573 0.8000 1.0000 2.0000 0.0000 Constraint 540 568 0.8000 1.0000 2.0000 0.0000 Constraint 540 559 0.8000 1.0000 2.0000 0.0000 Constraint 540 551 0.8000 1.0000 2.0000 0.0000 Constraint 540 545 0.8000 1.0000 2.0000 0.0000 Constraint 533 691 0.8000 1.0000 2.0000 0.0000 Constraint 533 680 0.8000 1.0000 2.0000 0.0000 Constraint 533 673 0.8000 1.0000 2.0000 0.0000 Constraint 533 667 0.8000 1.0000 2.0000 0.0000 Constraint 533 660 0.8000 1.0000 2.0000 0.0000 Constraint 533 649 0.8000 1.0000 2.0000 0.0000 Constraint 533 642 0.8000 1.0000 2.0000 0.0000 Constraint 533 634 0.8000 1.0000 2.0000 0.0000 Constraint 533 626 0.8000 1.0000 2.0000 0.0000 Constraint 533 615 0.8000 1.0000 2.0000 0.0000 Constraint 533 601 0.8000 1.0000 2.0000 0.0000 Constraint 533 593 0.8000 1.0000 2.0000 0.0000 Constraint 533 584 0.8000 1.0000 2.0000 0.0000 Constraint 533 573 0.8000 1.0000 2.0000 0.0000 Constraint 533 568 0.8000 1.0000 2.0000 0.0000 Constraint 533 559 0.8000 1.0000 2.0000 0.0000 Constraint 533 551 0.8000 1.0000 2.0000 0.0000 Constraint 533 545 0.8000 1.0000 2.0000 0.0000 Constraint 533 540 0.8000 1.0000 2.0000 0.0000 Constraint 526 691 0.8000 1.0000 2.0000 0.0000 Constraint 526 680 0.8000 1.0000 2.0000 0.0000 Constraint 526 673 0.8000 1.0000 2.0000 0.0000 Constraint 526 667 0.8000 1.0000 2.0000 0.0000 Constraint 526 660 0.8000 1.0000 2.0000 0.0000 Constraint 526 649 0.8000 1.0000 2.0000 0.0000 Constraint 526 642 0.8000 1.0000 2.0000 0.0000 Constraint 526 634 0.8000 1.0000 2.0000 0.0000 Constraint 526 626 0.8000 1.0000 2.0000 0.0000 Constraint 526 615 0.8000 1.0000 2.0000 0.0000 Constraint 526 610 0.8000 1.0000 2.0000 0.0000 Constraint 526 601 0.8000 1.0000 2.0000 0.0000 Constraint 526 593 0.8000 1.0000 2.0000 0.0000 Constraint 526 584 0.8000 1.0000 2.0000 0.0000 Constraint 526 573 0.8000 1.0000 2.0000 0.0000 Constraint 526 568 0.8000 1.0000 2.0000 0.0000 Constraint 526 559 0.8000 1.0000 2.0000 0.0000 Constraint 526 551 0.8000 1.0000 2.0000 0.0000 Constraint 526 545 0.8000 1.0000 2.0000 0.0000 Constraint 526 540 0.8000 1.0000 2.0000 0.0000 Constraint 526 533 0.8000 1.0000 2.0000 0.0000 Constraint 517 691 0.8000 1.0000 2.0000 0.0000 Constraint 517 680 0.8000 1.0000 2.0000 0.0000 Constraint 517 673 0.8000 1.0000 2.0000 0.0000 Constraint 517 667 0.8000 1.0000 2.0000 0.0000 Constraint 517 660 0.8000 1.0000 2.0000 0.0000 Constraint 517 649 0.8000 1.0000 2.0000 0.0000 Constraint 517 642 0.8000 1.0000 2.0000 0.0000 Constraint 517 634 0.8000 1.0000 2.0000 0.0000 Constraint 517 626 0.8000 1.0000 2.0000 0.0000 Constraint 517 615 0.8000 1.0000 2.0000 0.0000 Constraint 517 610 0.8000 1.0000 2.0000 0.0000 Constraint 517 601 0.8000 1.0000 2.0000 0.0000 Constraint 517 593 0.8000 1.0000 2.0000 0.0000 Constraint 517 584 0.8000 1.0000 2.0000 0.0000 Constraint 517 573 0.8000 1.0000 2.0000 0.0000 Constraint 517 568 0.8000 1.0000 2.0000 0.0000 Constraint 517 559 0.8000 1.0000 2.0000 0.0000 Constraint 517 551 0.8000 1.0000 2.0000 0.0000 Constraint 517 545 0.8000 1.0000 2.0000 0.0000 Constraint 517 540 0.8000 1.0000 2.0000 0.0000 Constraint 517 533 0.8000 1.0000 2.0000 0.0000 Constraint 517 526 0.8000 1.0000 2.0000 0.0000 Constraint 512 691 0.8000 1.0000 2.0000 0.0000 Constraint 512 680 0.8000 1.0000 2.0000 0.0000 Constraint 512 673 0.8000 1.0000 2.0000 0.0000 Constraint 512 667 0.8000 1.0000 2.0000 0.0000 Constraint 512 660 0.8000 1.0000 2.0000 0.0000 Constraint 512 649 0.8000 1.0000 2.0000 0.0000 Constraint 512 642 0.8000 1.0000 2.0000 0.0000 Constraint 512 634 0.8000 1.0000 2.0000 0.0000 Constraint 512 626 0.8000 1.0000 2.0000 0.0000 Constraint 512 615 0.8000 1.0000 2.0000 0.0000 Constraint 512 610 0.8000 1.0000 2.0000 0.0000 Constraint 512 601 0.8000 1.0000 2.0000 0.0000 Constraint 512 593 0.8000 1.0000 2.0000 0.0000 Constraint 512 584 0.8000 1.0000 2.0000 0.0000 Constraint 512 573 0.8000 1.0000 2.0000 0.0000 Constraint 512 568 0.8000 1.0000 2.0000 0.0000 Constraint 512 559 0.8000 1.0000 2.0000 0.0000 Constraint 512 551 0.8000 1.0000 2.0000 0.0000 Constraint 512 545 0.8000 1.0000 2.0000 0.0000 Constraint 512 540 0.8000 1.0000 2.0000 0.0000 Constraint 512 533 0.8000 1.0000 2.0000 0.0000 Constraint 512 526 0.8000 1.0000 2.0000 0.0000 Constraint 512 517 0.8000 1.0000 2.0000 0.0000 Constraint 502 691 0.8000 1.0000 2.0000 0.0000 Constraint 502 680 0.8000 1.0000 2.0000 0.0000 Constraint 502 673 0.8000 1.0000 2.0000 0.0000 Constraint 502 667 0.8000 1.0000 2.0000 0.0000 Constraint 502 660 0.8000 1.0000 2.0000 0.0000 Constraint 502 649 0.8000 1.0000 2.0000 0.0000 Constraint 502 642 0.8000 1.0000 2.0000 0.0000 Constraint 502 634 0.8000 1.0000 2.0000 0.0000 Constraint 502 626 0.8000 1.0000 2.0000 0.0000 Constraint 502 615 0.8000 1.0000 2.0000 0.0000 Constraint 502 610 0.8000 1.0000 2.0000 0.0000 Constraint 502 601 0.8000 1.0000 2.0000 0.0000 Constraint 502 593 0.8000 1.0000 2.0000 0.0000 Constraint 502 584 0.8000 1.0000 2.0000 0.0000 Constraint 502 573 0.8000 1.0000 2.0000 0.0000 Constraint 502 568 0.8000 1.0000 2.0000 0.0000 Constraint 502 559 0.8000 1.0000 2.0000 0.0000 Constraint 502 551 0.8000 1.0000 2.0000 0.0000 Constraint 502 545 0.8000 1.0000 2.0000 0.0000 Constraint 502 540 0.8000 1.0000 2.0000 0.0000 Constraint 502 533 0.8000 1.0000 2.0000 0.0000 Constraint 502 526 0.8000 1.0000 2.0000 0.0000 Constraint 502 517 0.8000 1.0000 2.0000 0.0000 Constraint 502 512 0.8000 1.0000 2.0000 0.0000 Constraint 491 691 0.8000 1.0000 2.0000 0.0000 Constraint 491 680 0.8000 1.0000 2.0000 0.0000 Constraint 491 673 0.8000 1.0000 2.0000 0.0000 Constraint 491 667 0.8000 1.0000 2.0000 0.0000 Constraint 491 660 0.8000 1.0000 2.0000 0.0000 Constraint 491 649 0.8000 1.0000 2.0000 0.0000 Constraint 491 642 0.8000 1.0000 2.0000 0.0000 Constraint 491 634 0.8000 1.0000 2.0000 0.0000 Constraint 491 626 0.8000 1.0000 2.0000 0.0000 Constraint 491 615 0.8000 1.0000 2.0000 0.0000 Constraint 491 610 0.8000 1.0000 2.0000 0.0000 Constraint 491 601 0.8000 1.0000 2.0000 0.0000 Constraint 491 593 0.8000 1.0000 2.0000 0.0000 Constraint 491 584 0.8000 1.0000 2.0000 0.0000 Constraint 491 573 0.8000 1.0000 2.0000 0.0000 Constraint 491 568 0.8000 1.0000 2.0000 0.0000 Constraint 491 559 0.8000 1.0000 2.0000 0.0000 Constraint 491 551 0.8000 1.0000 2.0000 0.0000 Constraint 491 545 0.8000 1.0000 2.0000 0.0000 Constraint 491 540 0.8000 1.0000 2.0000 0.0000 Constraint 491 533 0.8000 1.0000 2.0000 0.0000 Constraint 491 526 0.8000 1.0000 2.0000 0.0000 Constraint 491 517 0.8000 1.0000 2.0000 0.0000 Constraint 491 512 0.8000 1.0000 2.0000 0.0000 Constraint 491 502 0.8000 1.0000 2.0000 0.0000 Constraint 483 691 0.8000 1.0000 2.0000 0.0000 Constraint 483 680 0.8000 1.0000 2.0000 0.0000 Constraint 483 673 0.8000 1.0000 2.0000 0.0000 Constraint 483 667 0.8000 1.0000 2.0000 0.0000 Constraint 483 660 0.8000 1.0000 2.0000 0.0000 Constraint 483 649 0.8000 1.0000 2.0000 0.0000 Constraint 483 642 0.8000 1.0000 2.0000 0.0000 Constraint 483 634 0.8000 1.0000 2.0000 0.0000 Constraint 483 626 0.8000 1.0000 2.0000 0.0000 Constraint 483 615 0.8000 1.0000 2.0000 0.0000 Constraint 483 610 0.8000 1.0000 2.0000 0.0000 Constraint 483 601 0.8000 1.0000 2.0000 0.0000 Constraint 483 593 0.8000 1.0000 2.0000 0.0000 Constraint 483 584 0.8000 1.0000 2.0000 0.0000 Constraint 483 573 0.8000 1.0000 2.0000 0.0000 Constraint 483 568 0.8000 1.0000 2.0000 0.0000 Constraint 483 545 0.8000 1.0000 2.0000 0.0000 Constraint 483 540 0.8000 1.0000 2.0000 0.0000 Constraint 483 533 0.8000 1.0000 2.0000 0.0000 Constraint 483 526 0.8000 1.0000 2.0000 0.0000 Constraint 483 517 0.8000 1.0000 2.0000 0.0000 Constraint 483 512 0.8000 1.0000 2.0000 0.0000 Constraint 483 502 0.8000 1.0000 2.0000 0.0000 Constraint 483 491 0.8000 1.0000 2.0000 0.0000 Constraint 470 691 0.8000 1.0000 2.0000 0.0000 Constraint 470 673 0.8000 1.0000 2.0000 0.0000 Constraint 470 667 0.8000 1.0000 2.0000 0.0000 Constraint 470 642 0.8000 1.0000 2.0000 0.0000 Constraint 470 634 0.8000 1.0000 2.0000 0.0000 Constraint 470 626 0.8000 1.0000 2.0000 0.0000 Constraint 470 615 0.8000 1.0000 2.0000 0.0000 Constraint 470 610 0.8000 1.0000 2.0000 0.0000 Constraint 470 601 0.8000 1.0000 2.0000 0.0000 Constraint 470 593 0.8000 1.0000 2.0000 0.0000 Constraint 470 584 0.8000 1.0000 2.0000 0.0000 Constraint 470 573 0.8000 1.0000 2.0000 0.0000 Constraint 470 568 0.8000 1.0000 2.0000 0.0000 Constraint 470 559 0.8000 1.0000 2.0000 0.0000 Constraint 470 551 0.8000 1.0000 2.0000 0.0000 Constraint 470 540 0.8000 1.0000 2.0000 0.0000 Constraint 470 533 0.8000 1.0000 2.0000 0.0000 Constraint 470 526 0.8000 1.0000 2.0000 0.0000 Constraint 470 517 0.8000 1.0000 2.0000 0.0000 Constraint 470 512 0.8000 1.0000 2.0000 0.0000 Constraint 470 502 0.8000 1.0000 2.0000 0.0000 Constraint 470 491 0.8000 1.0000 2.0000 0.0000 Constraint 470 483 0.8000 1.0000 2.0000 0.0000 Constraint 463 691 0.8000 1.0000 2.0000 0.0000 Constraint 463 680 0.8000 1.0000 2.0000 0.0000 Constraint 463 673 0.8000 1.0000 2.0000 0.0000 Constraint 463 667 0.8000 1.0000 2.0000 0.0000 Constraint 463 660 0.8000 1.0000 2.0000 0.0000 Constraint 463 649 0.8000 1.0000 2.0000 0.0000 Constraint 463 642 0.8000 1.0000 2.0000 0.0000 Constraint 463 615 0.8000 1.0000 2.0000 0.0000 Constraint 463 610 0.8000 1.0000 2.0000 0.0000 Constraint 463 601 0.8000 1.0000 2.0000 0.0000 Constraint 463 593 0.8000 1.0000 2.0000 0.0000 Constraint 463 584 0.8000 1.0000 2.0000 0.0000 Constraint 463 568 0.8000 1.0000 2.0000 0.0000 Constraint 463 559 0.8000 1.0000 2.0000 0.0000 Constraint 463 540 0.8000 1.0000 2.0000 0.0000 Constraint 463 526 0.8000 1.0000 2.0000 0.0000 Constraint 463 517 0.8000 1.0000 2.0000 0.0000 Constraint 463 512 0.8000 1.0000 2.0000 0.0000 Constraint 463 502 0.8000 1.0000 2.0000 0.0000 Constraint 463 491 0.8000 1.0000 2.0000 0.0000 Constraint 463 483 0.8000 1.0000 2.0000 0.0000 Constraint 463 470 0.8000 1.0000 2.0000 0.0000 Constraint 455 691 0.8000 1.0000 2.0000 0.0000 Constraint 455 680 0.8000 1.0000 2.0000 0.0000 Constraint 455 673 0.8000 1.0000 2.0000 0.0000 Constraint 455 667 0.8000 1.0000 2.0000 0.0000 Constraint 455 660 0.8000 1.0000 2.0000 0.0000 Constraint 455 626 0.8000 1.0000 2.0000 0.0000 Constraint 455 615 0.8000 1.0000 2.0000 0.0000 Constraint 455 610 0.8000 1.0000 2.0000 0.0000 Constraint 455 601 0.8000 1.0000 2.0000 0.0000 Constraint 455 593 0.8000 1.0000 2.0000 0.0000 Constraint 455 584 0.8000 1.0000 2.0000 0.0000 Constraint 455 573 0.8000 1.0000 2.0000 0.0000 Constraint 455 568 0.8000 1.0000 2.0000 0.0000 Constraint 455 559 0.8000 1.0000 2.0000 0.0000 Constraint 455 551 0.8000 1.0000 2.0000 0.0000 Constraint 455 545 0.8000 1.0000 2.0000 0.0000 Constraint 455 540 0.8000 1.0000 2.0000 0.0000 Constraint 455 533 0.8000 1.0000 2.0000 0.0000 Constraint 455 517 0.8000 1.0000 2.0000 0.0000 Constraint 455 512 0.8000 1.0000 2.0000 0.0000 Constraint 455 502 0.8000 1.0000 2.0000 0.0000 Constraint 455 491 0.8000 1.0000 2.0000 0.0000 Constraint 455 483 0.8000 1.0000 2.0000 0.0000 Constraint 455 470 0.8000 1.0000 2.0000 0.0000 Constraint 455 463 0.8000 1.0000 2.0000 0.0000 Constraint 446 691 0.8000 1.0000 2.0000 0.0000 Constraint 446 680 0.8000 1.0000 2.0000 0.0000 Constraint 446 673 0.8000 1.0000 2.0000 0.0000 Constraint 446 667 0.8000 1.0000 2.0000 0.0000 Constraint 446 660 0.8000 1.0000 2.0000 0.0000 Constraint 446 649 0.8000 1.0000 2.0000 0.0000 Constraint 446 642 0.8000 1.0000 2.0000 0.0000 Constraint 446 634 0.8000 1.0000 2.0000 0.0000 Constraint 446 626 0.8000 1.0000 2.0000 0.0000 Constraint 446 615 0.8000 1.0000 2.0000 0.0000 Constraint 446 610 0.8000 1.0000 2.0000 0.0000 Constraint 446 601 0.8000 1.0000 2.0000 0.0000 Constraint 446 593 0.8000 1.0000 2.0000 0.0000 Constraint 446 584 0.8000 1.0000 2.0000 0.0000 Constraint 446 559 0.8000 1.0000 2.0000 0.0000 Constraint 446 512 0.8000 1.0000 2.0000 0.0000 Constraint 446 502 0.8000 1.0000 2.0000 0.0000 Constraint 446 491 0.8000 1.0000 2.0000 0.0000 Constraint 446 483 0.8000 1.0000 2.0000 0.0000 Constraint 446 470 0.8000 1.0000 2.0000 0.0000 Constraint 446 463 0.8000 1.0000 2.0000 0.0000 Constraint 446 455 0.8000 1.0000 2.0000 0.0000 Constraint 434 691 0.8000 1.0000 2.0000 0.0000 Constraint 434 680 0.8000 1.0000 2.0000 0.0000 Constraint 434 673 0.8000 1.0000 2.0000 0.0000 Constraint 434 667 0.8000 1.0000 2.0000 0.0000 Constraint 434 660 0.8000 1.0000 2.0000 0.0000 Constraint 434 649 0.8000 1.0000 2.0000 0.0000 Constraint 434 540 0.8000 1.0000 2.0000 0.0000 Constraint 434 526 0.8000 1.0000 2.0000 0.0000 Constraint 434 512 0.8000 1.0000 2.0000 0.0000 Constraint 434 502 0.8000 1.0000 2.0000 0.0000 Constraint 434 491 0.8000 1.0000 2.0000 0.0000 Constraint 434 483 0.8000 1.0000 2.0000 0.0000 Constraint 434 470 0.8000 1.0000 2.0000 0.0000 Constraint 434 463 0.8000 1.0000 2.0000 0.0000 Constraint 434 455 0.8000 1.0000 2.0000 0.0000 Constraint 434 446 0.8000 1.0000 2.0000 0.0000 Constraint 427 691 0.8000 1.0000 2.0000 0.0000 Constraint 427 680 0.8000 1.0000 2.0000 0.0000 Constraint 427 673 0.8000 1.0000 2.0000 0.0000 Constraint 427 667 0.8000 1.0000 2.0000 0.0000 Constraint 427 660 0.8000 1.0000 2.0000 0.0000 Constraint 427 593 0.8000 1.0000 2.0000 0.0000 Constraint 427 559 0.8000 1.0000 2.0000 0.0000 Constraint 427 483 0.8000 1.0000 2.0000 0.0000 Constraint 427 470 0.8000 1.0000 2.0000 0.0000 Constraint 427 463 0.8000 1.0000 2.0000 0.0000 Constraint 427 455 0.8000 1.0000 2.0000 0.0000 Constraint 427 446 0.8000 1.0000 2.0000 0.0000 Constraint 427 434 0.8000 1.0000 2.0000 0.0000 Constraint 418 691 0.8000 1.0000 2.0000 0.0000 Constraint 418 680 0.8000 1.0000 2.0000 0.0000 Constraint 418 673 0.8000 1.0000 2.0000 0.0000 Constraint 418 667 0.8000 1.0000 2.0000 0.0000 Constraint 418 610 0.8000 1.0000 2.0000 0.0000 Constraint 418 601 0.8000 1.0000 2.0000 0.0000 Constraint 418 593 0.8000 1.0000 2.0000 0.0000 Constraint 418 584 0.8000 1.0000 2.0000 0.0000 Constraint 418 573 0.8000 1.0000 2.0000 0.0000 Constraint 418 568 0.8000 1.0000 2.0000 0.0000 Constraint 418 559 0.8000 1.0000 2.0000 0.0000 Constraint 418 551 0.8000 1.0000 2.0000 0.0000 Constraint 418 540 0.8000 1.0000 2.0000 0.0000 Constraint 418 533 0.8000 1.0000 2.0000 0.0000 Constraint 418 526 0.8000 1.0000 2.0000 0.0000 Constraint 418 517 0.8000 1.0000 2.0000 0.0000 Constraint 418 512 0.8000 1.0000 2.0000 0.0000 Constraint 418 502 0.8000 1.0000 2.0000 0.0000 Constraint 418 491 0.8000 1.0000 2.0000 0.0000 Constraint 418 483 0.8000 1.0000 2.0000 0.0000 Constraint 418 470 0.8000 1.0000 2.0000 0.0000 Constraint 418 463 0.8000 1.0000 2.0000 0.0000 Constraint 418 455 0.8000 1.0000 2.0000 0.0000 Constraint 418 446 0.8000 1.0000 2.0000 0.0000 Constraint 418 434 0.8000 1.0000 2.0000 0.0000 Constraint 418 427 0.8000 1.0000 2.0000 0.0000 Constraint 410 691 0.8000 1.0000 2.0000 0.0000 Constraint 410 673 0.8000 1.0000 2.0000 0.0000 Constraint 410 667 0.8000 1.0000 2.0000 0.0000 Constraint 410 615 0.8000 1.0000 2.0000 0.0000 Constraint 410 610 0.8000 1.0000 2.0000 0.0000 Constraint 410 601 0.8000 1.0000 2.0000 0.0000 Constraint 410 593 0.8000 1.0000 2.0000 0.0000 Constraint 410 584 0.8000 1.0000 2.0000 0.0000 Constraint 410 573 0.8000 1.0000 2.0000 0.0000 Constraint 410 568 0.8000 1.0000 2.0000 0.0000 Constraint 410 559 0.8000 1.0000 2.0000 0.0000 Constraint 410 551 0.8000 1.0000 2.0000 0.0000 Constraint 410 545 0.8000 1.0000 2.0000 0.0000 Constraint 410 540 0.8000 1.0000 2.0000 0.0000 Constraint 410 533 0.8000 1.0000 2.0000 0.0000 Constraint 410 526 0.8000 1.0000 2.0000 0.0000 Constraint 410 517 0.8000 1.0000 2.0000 0.0000 Constraint 410 512 0.8000 1.0000 2.0000 0.0000 Constraint 410 502 0.8000 1.0000 2.0000 0.0000 Constraint 410 491 0.8000 1.0000 2.0000 0.0000 Constraint 410 483 0.8000 1.0000 2.0000 0.0000 Constraint 410 470 0.8000 1.0000 2.0000 0.0000 Constraint 410 463 0.8000 1.0000 2.0000 0.0000 Constraint 410 455 0.8000 1.0000 2.0000 0.0000 Constraint 410 446 0.8000 1.0000 2.0000 0.0000 Constraint 410 434 0.8000 1.0000 2.0000 0.0000 Constraint 410 427 0.8000 1.0000 2.0000 0.0000 Constraint 410 418 0.8000 1.0000 2.0000 0.0000 Constraint 402 691 0.8000 1.0000 2.0000 0.0000 Constraint 402 680 0.8000 1.0000 2.0000 0.0000 Constraint 402 673 0.8000 1.0000 2.0000 0.0000 Constraint 402 667 0.8000 1.0000 2.0000 0.0000 Constraint 402 660 0.8000 1.0000 2.0000 0.0000 Constraint 402 610 0.8000 1.0000 2.0000 0.0000 Constraint 402 601 0.8000 1.0000 2.0000 0.0000 Constraint 402 593 0.8000 1.0000 2.0000 0.0000 Constraint 402 584 0.8000 1.0000 2.0000 0.0000 Constraint 402 573 0.8000 1.0000 2.0000 0.0000 Constraint 402 568 0.8000 1.0000 2.0000 0.0000 Constraint 402 559 0.8000 1.0000 2.0000 0.0000 Constraint 402 540 0.8000 1.0000 2.0000 0.0000 Constraint 402 533 0.8000 1.0000 2.0000 0.0000 Constraint 402 517 0.8000 1.0000 2.0000 0.0000 Constraint 402 502 0.8000 1.0000 2.0000 0.0000 Constraint 402 463 0.8000 1.0000 2.0000 0.0000 Constraint 402 455 0.8000 1.0000 2.0000 0.0000 Constraint 402 446 0.8000 1.0000 2.0000 0.0000 Constraint 402 434 0.8000 1.0000 2.0000 0.0000 Constraint 402 427 0.8000 1.0000 2.0000 0.0000 Constraint 402 418 0.8000 1.0000 2.0000 0.0000 Constraint 402 410 0.8000 1.0000 2.0000 0.0000 Constraint 391 691 0.8000 1.0000 2.0000 0.0000 Constraint 391 673 0.8000 1.0000 2.0000 0.0000 Constraint 391 626 0.8000 1.0000 2.0000 0.0000 Constraint 391 615 0.8000 1.0000 2.0000 0.0000 Constraint 391 610 0.8000 1.0000 2.0000 0.0000 Constraint 391 601 0.8000 1.0000 2.0000 0.0000 Constraint 391 593 0.8000 1.0000 2.0000 0.0000 Constraint 391 584 0.8000 1.0000 2.0000 0.0000 Constraint 391 573 0.8000 1.0000 2.0000 0.0000 Constraint 391 568 0.8000 1.0000 2.0000 0.0000 Constraint 391 559 0.8000 1.0000 2.0000 0.0000 Constraint 391 551 0.8000 1.0000 2.0000 0.0000 Constraint 391 545 0.8000 1.0000 2.0000 0.0000 Constraint 391 540 0.8000 1.0000 2.0000 0.0000 Constraint 391 533 0.8000 1.0000 2.0000 0.0000 Constraint 391 526 0.8000 1.0000 2.0000 0.0000 Constraint 391 517 0.8000 1.0000 2.0000 0.0000 Constraint 391 512 0.8000 1.0000 2.0000 0.0000 Constraint 391 502 0.8000 1.0000 2.0000 0.0000 Constraint 391 491 0.8000 1.0000 2.0000 0.0000 Constraint 391 483 0.8000 1.0000 2.0000 0.0000 Constraint 391 455 0.8000 1.0000 2.0000 0.0000 Constraint 391 446 0.8000 1.0000 2.0000 0.0000 Constraint 391 434 0.8000 1.0000 2.0000 0.0000 Constraint 391 427 0.8000 1.0000 2.0000 0.0000 Constraint 391 418 0.8000 1.0000 2.0000 0.0000 Constraint 391 410 0.8000 1.0000 2.0000 0.0000 Constraint 391 402 0.8000 1.0000 2.0000 0.0000 Constraint 383 691 0.8000 1.0000 2.0000 0.0000 Constraint 383 680 0.8000 1.0000 2.0000 0.0000 Constraint 383 615 0.8000 1.0000 2.0000 0.0000 Constraint 383 610 0.8000 1.0000 2.0000 0.0000 Constraint 383 601 0.8000 1.0000 2.0000 0.0000 Constraint 383 593 0.8000 1.0000 2.0000 0.0000 Constraint 383 584 0.8000 1.0000 2.0000 0.0000 Constraint 383 573 0.8000 1.0000 2.0000 0.0000 Constraint 383 568 0.8000 1.0000 2.0000 0.0000 Constraint 383 559 0.8000 1.0000 2.0000 0.0000 Constraint 383 551 0.8000 1.0000 2.0000 0.0000 Constraint 383 545 0.8000 1.0000 2.0000 0.0000 Constraint 383 540 0.8000 1.0000 2.0000 0.0000 Constraint 383 533 0.8000 1.0000 2.0000 0.0000 Constraint 383 526 0.8000 1.0000 2.0000 0.0000 Constraint 383 517 0.8000 1.0000 2.0000 0.0000 Constraint 383 512 0.8000 1.0000 2.0000 0.0000 Constraint 383 502 0.8000 1.0000 2.0000 0.0000 Constraint 383 491 0.8000 1.0000 2.0000 0.0000 Constraint 383 483 0.8000 1.0000 2.0000 0.0000 Constraint 383 470 0.8000 1.0000 2.0000 0.0000 Constraint 383 463 0.8000 1.0000 2.0000 0.0000 Constraint 383 455 0.8000 1.0000 2.0000 0.0000 Constraint 383 446 0.8000 1.0000 2.0000 0.0000 Constraint 383 434 0.8000 1.0000 2.0000 0.0000 Constraint 383 427 0.8000 1.0000 2.0000 0.0000 Constraint 383 418 0.8000 1.0000 2.0000 0.0000 Constraint 383 410 0.8000 1.0000 2.0000 0.0000 Constraint 383 402 0.8000 1.0000 2.0000 0.0000 Constraint 383 391 0.8000 1.0000 2.0000 0.0000 Constraint 374 691 0.8000 1.0000 2.0000 0.0000 Constraint 374 642 0.8000 1.0000 2.0000 0.0000 Constraint 374 634 0.8000 1.0000 2.0000 0.0000 Constraint 374 626 0.8000 1.0000 2.0000 0.0000 Constraint 374 615 0.8000 1.0000 2.0000 0.0000 Constraint 374 610 0.8000 1.0000 2.0000 0.0000 Constraint 374 601 0.8000 1.0000 2.0000 0.0000 Constraint 374 593 0.8000 1.0000 2.0000 0.0000 Constraint 374 584 0.8000 1.0000 2.0000 0.0000 Constraint 374 573 0.8000 1.0000 2.0000 0.0000 Constraint 374 568 0.8000 1.0000 2.0000 0.0000 Constraint 374 559 0.8000 1.0000 2.0000 0.0000 Constraint 374 551 0.8000 1.0000 2.0000 0.0000 Constraint 374 545 0.8000 1.0000 2.0000 0.0000 Constraint 374 540 0.8000 1.0000 2.0000 0.0000 Constraint 374 533 0.8000 1.0000 2.0000 0.0000 Constraint 374 526 0.8000 1.0000 2.0000 0.0000 Constraint 374 517 0.8000 1.0000 2.0000 0.0000 Constraint 374 512 0.8000 1.0000 2.0000 0.0000 Constraint 374 502 0.8000 1.0000 2.0000 0.0000 Constraint 374 491 0.8000 1.0000 2.0000 0.0000 Constraint 374 483 0.8000 1.0000 2.0000 0.0000 Constraint 374 470 0.8000 1.0000 2.0000 0.0000 Constraint 374 463 0.8000 1.0000 2.0000 0.0000 Constraint 374 455 0.8000 1.0000 2.0000 0.0000 Constraint 374 446 0.8000 1.0000 2.0000 0.0000 Constraint 374 434 0.8000 1.0000 2.0000 0.0000 Constraint 374 427 0.8000 1.0000 2.0000 0.0000 Constraint 374 418 0.8000 1.0000 2.0000 0.0000 Constraint 374 410 0.8000 1.0000 2.0000 0.0000 Constraint 374 402 0.8000 1.0000 2.0000 0.0000 Constraint 374 391 0.8000 1.0000 2.0000 0.0000 Constraint 374 383 0.8000 1.0000 2.0000 0.0000 Constraint 369 691 0.8000 1.0000 2.0000 0.0000 Constraint 369 649 0.8000 1.0000 2.0000 0.0000 Constraint 369 634 0.8000 1.0000 2.0000 0.0000 Constraint 369 626 0.8000 1.0000 2.0000 0.0000 Constraint 369 615 0.8000 1.0000 2.0000 0.0000 Constraint 369 610 0.8000 1.0000 2.0000 0.0000 Constraint 369 601 0.8000 1.0000 2.0000 0.0000 Constraint 369 593 0.8000 1.0000 2.0000 0.0000 Constraint 369 584 0.8000 1.0000 2.0000 0.0000 Constraint 369 573 0.8000 1.0000 2.0000 0.0000 Constraint 369 568 0.8000 1.0000 2.0000 0.0000 Constraint 369 559 0.8000 1.0000 2.0000 0.0000 Constraint 369 551 0.8000 1.0000 2.0000 0.0000 Constraint 369 545 0.8000 1.0000 2.0000 0.0000 Constraint 369 540 0.8000 1.0000 2.0000 0.0000 Constraint 369 533 0.8000 1.0000 2.0000 0.0000 Constraint 369 526 0.8000 1.0000 2.0000 0.0000 Constraint 369 517 0.8000 1.0000 2.0000 0.0000 Constraint 369 512 0.8000 1.0000 2.0000 0.0000 Constraint 369 502 0.8000 1.0000 2.0000 0.0000 Constraint 369 491 0.8000 1.0000 2.0000 0.0000 Constraint 369 483 0.8000 1.0000 2.0000 0.0000 Constraint 369 470 0.8000 1.0000 2.0000 0.0000 Constraint 369 463 0.8000 1.0000 2.0000 0.0000 Constraint 369 455 0.8000 1.0000 2.0000 0.0000 Constraint 369 446 0.8000 1.0000 2.0000 0.0000 Constraint 369 434 0.8000 1.0000 2.0000 0.0000 Constraint 369 427 0.8000 1.0000 2.0000 0.0000 Constraint 369 418 0.8000 1.0000 2.0000 0.0000 Constraint 369 410 0.8000 1.0000 2.0000 0.0000 Constraint 369 402 0.8000 1.0000 2.0000 0.0000 Constraint 369 391 0.8000 1.0000 2.0000 0.0000 Constraint 369 383 0.8000 1.0000 2.0000 0.0000 Constraint 369 374 0.8000 1.0000 2.0000 0.0000 Constraint 358 691 0.8000 1.0000 2.0000 0.0000 Constraint 358 634 0.8000 1.0000 2.0000 0.0000 Constraint 358 626 0.8000 1.0000 2.0000 0.0000 Constraint 358 615 0.8000 1.0000 2.0000 0.0000 Constraint 358 610 0.8000 1.0000 2.0000 0.0000 Constraint 358 601 0.8000 1.0000 2.0000 0.0000 Constraint 358 593 0.8000 1.0000 2.0000 0.0000 Constraint 358 584 0.8000 1.0000 2.0000 0.0000 Constraint 358 573 0.8000 1.0000 2.0000 0.0000 Constraint 358 568 0.8000 1.0000 2.0000 0.0000 Constraint 358 559 0.8000 1.0000 2.0000 0.0000 Constraint 358 551 0.8000 1.0000 2.0000 0.0000 Constraint 358 545 0.8000 1.0000 2.0000 0.0000 Constraint 358 540 0.8000 1.0000 2.0000 0.0000 Constraint 358 533 0.8000 1.0000 2.0000 0.0000 Constraint 358 526 0.8000 1.0000 2.0000 0.0000 Constraint 358 517 0.8000 1.0000 2.0000 0.0000 Constraint 358 512 0.8000 1.0000 2.0000 0.0000 Constraint 358 502 0.8000 1.0000 2.0000 0.0000 Constraint 358 491 0.8000 1.0000 2.0000 0.0000 Constraint 358 483 0.8000 1.0000 2.0000 0.0000 Constraint 358 470 0.8000 1.0000 2.0000 0.0000 Constraint 358 463 0.8000 1.0000 2.0000 0.0000 Constraint 358 455 0.8000 1.0000 2.0000 0.0000 Constraint 358 446 0.8000 1.0000 2.0000 0.0000 Constraint 358 434 0.8000 1.0000 2.0000 0.0000 Constraint 358 427 0.8000 1.0000 2.0000 0.0000 Constraint 358 418 0.8000 1.0000 2.0000 0.0000 Constraint 358 410 0.8000 1.0000 2.0000 0.0000 Constraint 358 402 0.8000 1.0000 2.0000 0.0000 Constraint 358 391 0.8000 1.0000 2.0000 0.0000 Constraint 358 383 0.8000 1.0000 2.0000 0.0000 Constraint 358 374 0.8000 1.0000 2.0000 0.0000 Constraint 358 369 0.8000 1.0000 2.0000 0.0000 Constraint 350 691 0.8000 1.0000 2.0000 0.0000 Constraint 350 680 0.8000 1.0000 2.0000 0.0000 Constraint 350 673 0.8000 1.0000 2.0000 0.0000 Constraint 350 667 0.8000 1.0000 2.0000 0.0000 Constraint 350 660 0.8000 1.0000 2.0000 0.0000 Constraint 350 610 0.8000 1.0000 2.0000 0.0000 Constraint 350 601 0.8000 1.0000 2.0000 0.0000 Constraint 350 593 0.8000 1.0000 2.0000 0.0000 Constraint 350 584 0.8000 1.0000 2.0000 0.0000 Constraint 350 573 0.8000 1.0000 2.0000 0.0000 Constraint 350 568 0.8000 1.0000 2.0000 0.0000 Constraint 350 559 0.8000 1.0000 2.0000 0.0000 Constraint 350 551 0.8000 1.0000 2.0000 0.0000 Constraint 350 545 0.8000 1.0000 2.0000 0.0000 Constraint 350 540 0.8000 1.0000 2.0000 0.0000 Constraint 350 533 0.8000 1.0000 2.0000 0.0000 Constraint 350 526 0.8000 1.0000 2.0000 0.0000 Constraint 350 517 0.8000 1.0000 2.0000 0.0000 Constraint 350 512 0.8000 1.0000 2.0000 0.0000 Constraint 350 502 0.8000 1.0000 2.0000 0.0000 Constraint 350 491 0.8000 1.0000 2.0000 0.0000 Constraint 350 483 0.8000 1.0000 2.0000 0.0000 Constraint 350 470 0.8000 1.0000 2.0000 0.0000 Constraint 350 463 0.8000 1.0000 2.0000 0.0000 Constraint 350 455 0.8000 1.0000 2.0000 0.0000 Constraint 350 446 0.8000 1.0000 2.0000 0.0000 Constraint 350 434 0.8000 1.0000 2.0000 0.0000 Constraint 350 427 0.8000 1.0000 2.0000 0.0000 Constraint 350 418 0.8000 1.0000 2.0000 0.0000 Constraint 350 410 0.8000 1.0000 2.0000 0.0000 Constraint 350 402 0.8000 1.0000 2.0000 0.0000 Constraint 350 391 0.8000 1.0000 2.0000 0.0000 Constraint 350 383 0.8000 1.0000 2.0000 0.0000 Constraint 350 374 0.8000 1.0000 2.0000 0.0000 Constraint 350 369 0.8000 1.0000 2.0000 0.0000 Constraint 350 358 0.8000 1.0000 2.0000 0.0000 Constraint 340 691 0.8000 1.0000 2.0000 0.0000 Constraint 340 680 0.8000 1.0000 2.0000 0.0000 Constraint 340 667 0.8000 1.0000 2.0000 0.0000 Constraint 340 660 0.8000 1.0000 2.0000 0.0000 Constraint 340 649 0.8000 1.0000 2.0000 0.0000 Constraint 340 642 0.8000 1.0000 2.0000 0.0000 Constraint 340 601 0.8000 1.0000 2.0000 0.0000 Constraint 340 593 0.8000 1.0000 2.0000 0.0000 Constraint 340 584 0.8000 1.0000 2.0000 0.0000 Constraint 340 573 0.8000 1.0000 2.0000 0.0000 Constraint 340 568 0.8000 1.0000 2.0000 0.0000 Constraint 340 559 0.8000 1.0000 2.0000 0.0000 Constraint 340 551 0.8000 1.0000 2.0000 0.0000 Constraint 340 545 0.8000 1.0000 2.0000 0.0000 Constraint 340 540 0.8000 1.0000 2.0000 0.0000 Constraint 340 533 0.8000 1.0000 2.0000 0.0000 Constraint 340 526 0.8000 1.0000 2.0000 0.0000 Constraint 340 517 0.8000 1.0000 2.0000 0.0000 Constraint 340 512 0.8000 1.0000 2.0000 0.0000 Constraint 340 502 0.8000 1.0000 2.0000 0.0000 Constraint 340 491 0.8000 1.0000 2.0000 0.0000 Constraint 340 483 0.8000 1.0000 2.0000 0.0000 Constraint 340 470 0.8000 1.0000 2.0000 0.0000 Constraint 340 463 0.8000 1.0000 2.0000 0.0000 Constraint 340 455 0.8000 1.0000 2.0000 0.0000 Constraint 340 446 0.8000 1.0000 2.0000 0.0000 Constraint 340 434 0.8000 1.0000 2.0000 0.0000 Constraint 340 427 0.8000 1.0000 2.0000 0.0000 Constraint 340 418 0.8000 1.0000 2.0000 0.0000 Constraint 340 410 0.8000 1.0000 2.0000 0.0000 Constraint 340 402 0.8000 1.0000 2.0000 0.0000 Constraint 340 391 0.8000 1.0000 2.0000 0.0000 Constraint 340 383 0.8000 1.0000 2.0000 0.0000 Constraint 340 374 0.8000 1.0000 2.0000 0.0000 Constraint 340 369 0.8000 1.0000 2.0000 0.0000 Constraint 340 358 0.8000 1.0000 2.0000 0.0000 Constraint 340 350 0.8000 1.0000 2.0000 0.0000 Constraint 329 691 0.8000 1.0000 2.0000 0.0000 Constraint 329 667 0.8000 1.0000 2.0000 0.0000 Constraint 329 660 0.8000 1.0000 2.0000 0.0000 Constraint 329 649 0.8000 1.0000 2.0000 0.0000 Constraint 329 642 0.8000 1.0000 2.0000 0.0000 Constraint 329 634 0.8000 1.0000 2.0000 0.0000 Constraint 329 626 0.8000 1.0000 2.0000 0.0000 Constraint 329 615 0.8000 1.0000 2.0000 0.0000 Constraint 329 610 0.8000 1.0000 2.0000 0.0000 Constraint 329 601 0.8000 1.0000 2.0000 0.0000 Constraint 329 593 0.8000 1.0000 2.0000 0.0000 Constraint 329 584 0.8000 1.0000 2.0000 0.0000 Constraint 329 573 0.8000 1.0000 2.0000 0.0000 Constraint 329 568 0.8000 1.0000 2.0000 0.0000 Constraint 329 559 0.8000 1.0000 2.0000 0.0000 Constraint 329 551 0.8000 1.0000 2.0000 0.0000 Constraint 329 545 0.8000 1.0000 2.0000 0.0000 Constraint 329 540 0.8000 1.0000 2.0000 0.0000 Constraint 329 533 0.8000 1.0000 2.0000 0.0000 Constraint 329 526 0.8000 1.0000 2.0000 0.0000 Constraint 329 517 0.8000 1.0000 2.0000 0.0000 Constraint 329 512 0.8000 1.0000 2.0000 0.0000 Constraint 329 502 0.8000 1.0000 2.0000 0.0000 Constraint 329 491 0.8000 1.0000 2.0000 0.0000 Constraint 329 483 0.8000 1.0000 2.0000 0.0000 Constraint 329 470 0.8000 1.0000 2.0000 0.0000 Constraint 329 463 0.8000 1.0000 2.0000 0.0000 Constraint 329 455 0.8000 1.0000 2.0000 0.0000 Constraint 329 446 0.8000 1.0000 2.0000 0.0000 Constraint 329 434 0.8000 1.0000 2.0000 0.0000 Constraint 329 427 0.8000 1.0000 2.0000 0.0000 Constraint 329 418 0.8000 1.0000 2.0000 0.0000 Constraint 329 410 0.8000 1.0000 2.0000 0.0000 Constraint 329 402 0.8000 1.0000 2.0000 0.0000 Constraint 329 391 0.8000 1.0000 2.0000 0.0000 Constraint 329 383 0.8000 1.0000 2.0000 0.0000 Constraint 329 374 0.8000 1.0000 2.0000 0.0000 Constraint 329 369 0.8000 1.0000 2.0000 0.0000 Constraint 329 358 0.8000 1.0000 2.0000 0.0000 Constraint 329 350 0.8000 1.0000 2.0000 0.0000 Constraint 329 340 0.8000 1.0000 2.0000 0.0000 Constraint 324 691 0.8000 1.0000 2.0000 0.0000 Constraint 324 680 0.8000 1.0000 2.0000 0.0000 Constraint 324 673 0.8000 1.0000 2.0000 0.0000 Constraint 324 667 0.8000 1.0000 2.0000 0.0000 Constraint 324 660 0.8000 1.0000 2.0000 0.0000 Constraint 324 649 0.8000 1.0000 2.0000 0.0000 Constraint 324 642 0.8000 1.0000 2.0000 0.0000 Constraint 324 634 0.8000 1.0000 2.0000 0.0000 Constraint 324 626 0.8000 1.0000 2.0000 0.0000 Constraint 324 615 0.8000 1.0000 2.0000 0.0000 Constraint 324 610 0.8000 1.0000 2.0000 0.0000 Constraint 324 601 0.8000 1.0000 2.0000 0.0000 Constraint 324 593 0.8000 1.0000 2.0000 0.0000 Constraint 324 584 0.8000 1.0000 2.0000 0.0000 Constraint 324 573 0.8000 1.0000 2.0000 0.0000 Constraint 324 568 0.8000 1.0000 2.0000 0.0000 Constraint 324 559 0.8000 1.0000 2.0000 0.0000 Constraint 324 551 0.8000 1.0000 2.0000 0.0000 Constraint 324 545 0.8000 1.0000 2.0000 0.0000 Constraint 324 540 0.8000 1.0000 2.0000 0.0000 Constraint 324 533 0.8000 1.0000 2.0000 0.0000 Constraint 324 526 0.8000 1.0000 2.0000 0.0000 Constraint 324 517 0.8000 1.0000 2.0000 0.0000 Constraint 324 512 0.8000 1.0000 2.0000 0.0000 Constraint 324 502 0.8000 1.0000 2.0000 0.0000 Constraint 324 491 0.8000 1.0000 2.0000 0.0000 Constraint 324 483 0.8000 1.0000 2.0000 0.0000 Constraint 324 470 0.8000 1.0000 2.0000 0.0000 Constraint 324 463 0.8000 1.0000 2.0000 0.0000 Constraint 324 455 0.8000 1.0000 2.0000 0.0000 Constraint 324 446 0.8000 1.0000 2.0000 0.0000 Constraint 324 434 0.8000 1.0000 2.0000 0.0000 Constraint 324 427 0.8000 1.0000 2.0000 0.0000 Constraint 324 418 0.8000 1.0000 2.0000 0.0000 Constraint 324 410 0.8000 1.0000 2.0000 0.0000 Constraint 324 402 0.8000 1.0000 2.0000 0.0000 Constraint 324 391 0.8000 1.0000 2.0000 0.0000 Constraint 324 383 0.8000 1.0000 2.0000 0.0000 Constraint 324 374 0.8000 1.0000 2.0000 0.0000 Constraint 324 369 0.8000 1.0000 2.0000 0.0000 Constraint 324 358 0.8000 1.0000 2.0000 0.0000 Constraint 324 350 0.8000 1.0000 2.0000 0.0000 Constraint 324 340 0.8000 1.0000 2.0000 0.0000 Constraint 324 329 0.8000 1.0000 2.0000 0.0000 Constraint 319 691 0.8000 1.0000 2.0000 0.0000 Constraint 319 680 0.8000 1.0000 2.0000 0.0000 Constraint 319 673 0.8000 1.0000 2.0000 0.0000 Constraint 319 667 0.8000 1.0000 2.0000 0.0000 Constraint 319 660 0.8000 1.0000 2.0000 0.0000 Constraint 319 649 0.8000 1.0000 2.0000 0.0000 Constraint 319 642 0.8000 1.0000 2.0000 0.0000 Constraint 319 615 0.8000 1.0000 2.0000 0.0000 Constraint 319 610 0.8000 1.0000 2.0000 0.0000 Constraint 319 601 0.8000 1.0000 2.0000 0.0000 Constraint 319 593 0.8000 1.0000 2.0000 0.0000 Constraint 319 584 0.8000 1.0000 2.0000 0.0000 Constraint 319 573 0.8000 1.0000 2.0000 0.0000 Constraint 319 568 0.8000 1.0000 2.0000 0.0000 Constraint 319 559 0.8000 1.0000 2.0000 0.0000 Constraint 319 551 0.8000 1.0000 2.0000 0.0000 Constraint 319 545 0.8000 1.0000 2.0000 0.0000 Constraint 319 540 0.8000 1.0000 2.0000 0.0000 Constraint 319 533 0.8000 1.0000 2.0000 0.0000 Constraint 319 526 0.8000 1.0000 2.0000 0.0000 Constraint 319 517 0.8000 1.0000 2.0000 0.0000 Constraint 319 512 0.8000 1.0000 2.0000 0.0000 Constraint 319 502 0.8000 1.0000 2.0000 0.0000 Constraint 319 491 0.8000 1.0000 2.0000 0.0000 Constraint 319 483 0.8000 1.0000 2.0000 0.0000 Constraint 319 470 0.8000 1.0000 2.0000 0.0000 Constraint 319 463 0.8000 1.0000 2.0000 0.0000 Constraint 319 455 0.8000 1.0000 2.0000 0.0000 Constraint 319 446 0.8000 1.0000 2.0000 0.0000 Constraint 319 434 0.8000 1.0000 2.0000 0.0000 Constraint 319 427 0.8000 1.0000 2.0000 0.0000 Constraint 319 418 0.8000 1.0000 2.0000 0.0000 Constraint 319 410 0.8000 1.0000 2.0000 0.0000 Constraint 319 402 0.8000 1.0000 2.0000 0.0000 Constraint 319 391 0.8000 1.0000 2.0000 0.0000 Constraint 319 383 0.8000 1.0000 2.0000 0.0000 Constraint 319 374 0.8000 1.0000 2.0000 0.0000 Constraint 319 369 0.8000 1.0000 2.0000 0.0000 Constraint 319 358 0.8000 1.0000 2.0000 0.0000 Constraint 319 350 0.8000 1.0000 2.0000 0.0000 Constraint 319 340 0.8000 1.0000 2.0000 0.0000 Constraint 319 329 0.8000 1.0000 2.0000 0.0000 Constraint 319 324 0.8000 1.0000 2.0000 0.0000 Constraint 312 667 0.8000 1.0000 2.0000 0.0000 Constraint 312 660 0.8000 1.0000 2.0000 0.0000 Constraint 312 649 0.8000 1.0000 2.0000 0.0000 Constraint 312 642 0.8000 1.0000 2.0000 0.0000 Constraint 312 634 0.8000 1.0000 2.0000 0.0000 Constraint 312 626 0.8000 1.0000 2.0000 0.0000 Constraint 312 615 0.8000 1.0000 2.0000 0.0000 Constraint 312 584 0.8000 1.0000 2.0000 0.0000 Constraint 312 573 0.8000 1.0000 2.0000 0.0000 Constraint 312 568 0.8000 1.0000 2.0000 0.0000 Constraint 312 559 0.8000 1.0000 2.0000 0.0000 Constraint 312 551 0.8000 1.0000 2.0000 0.0000 Constraint 312 545 0.8000 1.0000 2.0000 0.0000 Constraint 312 540 0.8000 1.0000 2.0000 0.0000 Constraint 312 533 0.8000 1.0000 2.0000 0.0000 Constraint 312 526 0.8000 1.0000 2.0000 0.0000 Constraint 312 517 0.8000 1.0000 2.0000 0.0000 Constraint 312 512 0.8000 1.0000 2.0000 0.0000 Constraint 312 502 0.8000 1.0000 2.0000 0.0000 Constraint 312 491 0.8000 1.0000 2.0000 0.0000 Constraint 312 483 0.8000 1.0000 2.0000 0.0000 Constraint 312 470 0.8000 1.0000 2.0000 0.0000 Constraint 312 463 0.8000 1.0000 2.0000 0.0000 Constraint 312 455 0.8000 1.0000 2.0000 0.0000 Constraint 312 446 0.8000 1.0000 2.0000 0.0000 Constraint 312 434 0.8000 1.0000 2.0000 0.0000 Constraint 312 427 0.8000 1.0000 2.0000 0.0000 Constraint 312 418 0.8000 1.0000 2.0000 0.0000 Constraint 312 410 0.8000 1.0000 2.0000 0.0000 Constraint 312 402 0.8000 1.0000 2.0000 0.0000 Constraint 312 391 0.8000 1.0000 2.0000 0.0000 Constraint 312 383 0.8000 1.0000 2.0000 0.0000 Constraint 312 374 0.8000 1.0000 2.0000 0.0000 Constraint 312 369 0.8000 1.0000 2.0000 0.0000 Constraint 312 358 0.8000 1.0000 2.0000 0.0000 Constraint 312 350 0.8000 1.0000 2.0000 0.0000 Constraint 312 340 0.8000 1.0000 2.0000 0.0000 Constraint 312 329 0.8000 1.0000 2.0000 0.0000 Constraint 312 324 0.8000 1.0000 2.0000 0.0000 Constraint 312 319 0.8000 1.0000 2.0000 0.0000 Constraint 306 691 0.8000 1.0000 2.0000 0.0000 Constraint 306 680 0.8000 1.0000 2.0000 0.0000 Constraint 306 673 0.8000 1.0000 2.0000 0.0000 Constraint 306 667 0.8000 1.0000 2.0000 0.0000 Constraint 306 660 0.8000 1.0000 2.0000 0.0000 Constraint 306 649 0.8000 1.0000 2.0000 0.0000 Constraint 306 642 0.8000 1.0000 2.0000 0.0000 Constraint 306 634 0.8000 1.0000 2.0000 0.0000 Constraint 306 626 0.8000 1.0000 2.0000 0.0000 Constraint 306 615 0.8000 1.0000 2.0000 0.0000 Constraint 306 610 0.8000 1.0000 2.0000 0.0000 Constraint 306 601 0.8000 1.0000 2.0000 0.0000 Constraint 306 593 0.8000 1.0000 2.0000 0.0000 Constraint 306 584 0.8000 1.0000 2.0000 0.0000 Constraint 306 573 0.8000 1.0000 2.0000 0.0000 Constraint 306 568 0.8000 1.0000 2.0000 0.0000 Constraint 306 559 0.8000 1.0000 2.0000 0.0000 Constraint 306 551 0.8000 1.0000 2.0000 0.0000 Constraint 306 545 0.8000 1.0000 2.0000 0.0000 Constraint 306 540 0.8000 1.0000 2.0000 0.0000 Constraint 306 533 0.8000 1.0000 2.0000 0.0000 Constraint 306 526 0.8000 1.0000 2.0000 0.0000 Constraint 306 517 0.8000 1.0000 2.0000 0.0000 Constraint 306 512 0.8000 1.0000 2.0000 0.0000 Constraint 306 502 0.8000 1.0000 2.0000 0.0000 Constraint 306 491 0.8000 1.0000 2.0000 0.0000 Constraint 306 483 0.8000 1.0000 2.0000 0.0000 Constraint 306 470 0.8000 1.0000 2.0000 0.0000 Constraint 306 463 0.8000 1.0000 2.0000 0.0000 Constraint 306 455 0.8000 1.0000 2.0000 0.0000 Constraint 306 446 0.8000 1.0000 2.0000 0.0000 Constraint 306 434 0.8000 1.0000 2.0000 0.0000 Constraint 306 427 0.8000 1.0000 2.0000 0.0000 Constraint 306 418 0.8000 1.0000 2.0000 0.0000 Constraint 306 410 0.8000 1.0000 2.0000 0.0000 Constraint 306 402 0.8000 1.0000 2.0000 0.0000 Constraint 306 391 0.8000 1.0000 2.0000 0.0000 Constraint 306 383 0.8000 1.0000 2.0000 0.0000 Constraint 306 374 0.8000 1.0000 2.0000 0.0000 Constraint 306 369 0.8000 1.0000 2.0000 0.0000 Constraint 306 358 0.8000 1.0000 2.0000 0.0000 Constraint 306 350 0.8000 1.0000 2.0000 0.0000 Constraint 306 340 0.8000 1.0000 2.0000 0.0000 Constraint 306 329 0.8000 1.0000 2.0000 0.0000 Constraint 306 324 0.8000 1.0000 2.0000 0.0000 Constraint 306 319 0.8000 1.0000 2.0000 0.0000 Constraint 306 312 0.8000 1.0000 2.0000 0.0000 Constraint 295 691 0.8000 1.0000 2.0000 0.0000 Constraint 295 680 0.8000 1.0000 2.0000 0.0000 Constraint 295 673 0.8000 1.0000 2.0000 0.0000 Constraint 295 667 0.8000 1.0000 2.0000 0.0000 Constraint 295 660 0.8000 1.0000 2.0000 0.0000 Constraint 295 649 0.8000 1.0000 2.0000 0.0000 Constraint 295 642 0.8000 1.0000 2.0000 0.0000 Constraint 295 634 0.8000 1.0000 2.0000 0.0000 Constraint 295 626 0.8000 1.0000 2.0000 0.0000 Constraint 295 615 0.8000 1.0000 2.0000 0.0000 Constraint 295 610 0.8000 1.0000 2.0000 0.0000 Constraint 295 601 0.8000 1.0000 2.0000 0.0000 Constraint 295 593 0.8000 1.0000 2.0000 0.0000 Constraint 295 584 0.8000 1.0000 2.0000 0.0000 Constraint 295 573 0.8000 1.0000 2.0000 0.0000 Constraint 295 568 0.8000 1.0000 2.0000 0.0000 Constraint 295 559 0.8000 1.0000 2.0000 0.0000 Constraint 295 551 0.8000 1.0000 2.0000 0.0000 Constraint 295 545 0.8000 1.0000 2.0000 0.0000 Constraint 295 540 0.8000 1.0000 2.0000 0.0000 Constraint 295 533 0.8000 1.0000 2.0000 0.0000 Constraint 295 526 0.8000 1.0000 2.0000 0.0000 Constraint 295 517 0.8000 1.0000 2.0000 0.0000 Constraint 295 512 0.8000 1.0000 2.0000 0.0000 Constraint 295 502 0.8000 1.0000 2.0000 0.0000 Constraint 295 491 0.8000 1.0000 2.0000 0.0000 Constraint 295 483 0.8000 1.0000 2.0000 0.0000 Constraint 295 470 0.8000 1.0000 2.0000 0.0000 Constraint 295 463 0.8000 1.0000 2.0000 0.0000 Constraint 295 455 0.8000 1.0000 2.0000 0.0000 Constraint 295 446 0.8000 1.0000 2.0000 0.0000 Constraint 295 434 0.8000 1.0000 2.0000 0.0000 Constraint 295 427 0.8000 1.0000 2.0000 0.0000 Constraint 295 418 0.8000 1.0000 2.0000 0.0000 Constraint 295 410 0.8000 1.0000 2.0000 0.0000 Constraint 295 402 0.8000 1.0000 2.0000 0.0000 Constraint 295 391 0.8000 1.0000 2.0000 0.0000 Constraint 295 383 0.8000 1.0000 2.0000 0.0000 Constraint 295 374 0.8000 1.0000 2.0000 0.0000 Constraint 295 369 0.8000 1.0000 2.0000 0.0000 Constraint 295 358 0.8000 1.0000 2.0000 0.0000 Constraint 295 350 0.8000 1.0000 2.0000 0.0000 Constraint 295 340 0.8000 1.0000 2.0000 0.0000 Constraint 295 329 0.8000 1.0000 2.0000 0.0000 Constraint 295 324 0.8000 1.0000 2.0000 0.0000 Constraint 295 319 0.8000 1.0000 2.0000 0.0000 Constraint 295 312 0.8000 1.0000 2.0000 0.0000 Constraint 295 306 0.8000 1.0000 2.0000 0.0000 Constraint 287 691 0.8000 1.0000 2.0000 0.0000 Constraint 287 680 0.8000 1.0000 2.0000 0.0000 Constraint 287 673 0.8000 1.0000 2.0000 0.0000 Constraint 287 667 0.8000 1.0000 2.0000 0.0000 Constraint 287 660 0.8000 1.0000 2.0000 0.0000 Constraint 287 649 0.8000 1.0000 2.0000 0.0000 Constraint 287 642 0.8000 1.0000 2.0000 0.0000 Constraint 287 634 0.8000 1.0000 2.0000 0.0000 Constraint 287 626 0.8000 1.0000 2.0000 0.0000 Constraint 287 615 0.8000 1.0000 2.0000 0.0000 Constraint 287 610 0.8000 1.0000 2.0000 0.0000 Constraint 287 601 0.8000 1.0000 2.0000 0.0000 Constraint 287 593 0.8000 1.0000 2.0000 0.0000 Constraint 287 584 0.8000 1.0000 2.0000 0.0000 Constraint 287 573 0.8000 1.0000 2.0000 0.0000 Constraint 287 568 0.8000 1.0000 2.0000 0.0000 Constraint 287 559 0.8000 1.0000 2.0000 0.0000 Constraint 287 551 0.8000 1.0000 2.0000 0.0000 Constraint 287 545 0.8000 1.0000 2.0000 0.0000 Constraint 287 540 0.8000 1.0000 2.0000 0.0000 Constraint 287 533 0.8000 1.0000 2.0000 0.0000 Constraint 287 526 0.8000 1.0000 2.0000 0.0000 Constraint 287 517 0.8000 1.0000 2.0000 0.0000 Constraint 287 512 0.8000 1.0000 2.0000 0.0000 Constraint 287 502 0.8000 1.0000 2.0000 0.0000 Constraint 287 491 0.8000 1.0000 2.0000 0.0000 Constraint 287 483 0.8000 1.0000 2.0000 0.0000 Constraint 287 470 0.8000 1.0000 2.0000 0.0000 Constraint 287 463 0.8000 1.0000 2.0000 0.0000 Constraint 287 455 0.8000 1.0000 2.0000 0.0000 Constraint 287 446 0.8000 1.0000 2.0000 0.0000 Constraint 287 434 0.8000 1.0000 2.0000 0.0000 Constraint 287 427 0.8000 1.0000 2.0000 0.0000 Constraint 287 418 0.8000 1.0000 2.0000 0.0000 Constraint 287 410 0.8000 1.0000 2.0000 0.0000 Constraint 287 402 0.8000 1.0000 2.0000 0.0000 Constraint 287 391 0.8000 1.0000 2.0000 0.0000 Constraint 287 383 0.8000 1.0000 2.0000 0.0000 Constraint 287 374 0.8000 1.0000 2.0000 0.0000 Constraint 287 358 0.8000 1.0000 2.0000 0.0000 Constraint 287 340 0.8000 1.0000 2.0000 0.0000 Constraint 287 329 0.8000 1.0000 2.0000 0.0000 Constraint 287 324 0.8000 1.0000 2.0000 0.0000 Constraint 287 319 0.8000 1.0000 2.0000 0.0000 Constraint 287 312 0.8000 1.0000 2.0000 0.0000 Constraint 287 306 0.8000 1.0000 2.0000 0.0000 Constraint 287 295 0.8000 1.0000 2.0000 0.0000 Constraint 280 691 0.8000 1.0000 2.0000 0.0000 Constraint 280 680 0.8000 1.0000 2.0000 0.0000 Constraint 280 673 0.8000 1.0000 2.0000 0.0000 Constraint 280 667 0.8000 1.0000 2.0000 0.0000 Constraint 280 660 0.8000 1.0000 2.0000 0.0000 Constraint 280 649 0.8000 1.0000 2.0000 0.0000 Constraint 280 642 0.8000 1.0000 2.0000 0.0000 Constraint 280 634 0.8000 1.0000 2.0000 0.0000 Constraint 280 626 0.8000 1.0000 2.0000 0.0000 Constraint 280 615 0.8000 1.0000 2.0000 0.0000 Constraint 280 610 0.8000 1.0000 2.0000 0.0000 Constraint 280 601 0.8000 1.0000 2.0000 0.0000 Constraint 280 593 0.8000 1.0000 2.0000 0.0000 Constraint 280 584 0.8000 1.0000 2.0000 0.0000 Constraint 280 573 0.8000 1.0000 2.0000 0.0000 Constraint 280 568 0.8000 1.0000 2.0000 0.0000 Constraint 280 559 0.8000 1.0000 2.0000 0.0000 Constraint 280 551 0.8000 1.0000 2.0000 0.0000 Constraint 280 545 0.8000 1.0000 2.0000 0.0000 Constraint 280 540 0.8000 1.0000 2.0000 0.0000 Constraint 280 533 0.8000 1.0000 2.0000 0.0000 Constraint 280 526 0.8000 1.0000 2.0000 0.0000 Constraint 280 517 0.8000 1.0000 2.0000 0.0000 Constraint 280 512 0.8000 1.0000 2.0000 0.0000 Constraint 280 502 0.8000 1.0000 2.0000 0.0000 Constraint 280 491 0.8000 1.0000 2.0000 0.0000 Constraint 280 483 0.8000 1.0000 2.0000 0.0000 Constraint 280 470 0.8000 1.0000 2.0000 0.0000 Constraint 280 463 0.8000 1.0000 2.0000 0.0000 Constraint 280 455 0.8000 1.0000 2.0000 0.0000 Constraint 280 446 0.8000 1.0000 2.0000 0.0000 Constraint 280 434 0.8000 1.0000 2.0000 0.0000 Constraint 280 427 0.8000 1.0000 2.0000 0.0000 Constraint 280 418 0.8000 1.0000 2.0000 0.0000 Constraint 280 410 0.8000 1.0000 2.0000 0.0000 Constraint 280 402 0.8000 1.0000 2.0000 0.0000 Constraint 280 391 0.8000 1.0000 2.0000 0.0000 Constraint 280 374 0.8000 1.0000 2.0000 0.0000 Constraint 280 329 0.8000 1.0000 2.0000 0.0000 Constraint 280 324 0.8000 1.0000 2.0000 0.0000 Constraint 280 319 0.8000 1.0000 2.0000 0.0000 Constraint 280 312 0.8000 1.0000 2.0000 0.0000 Constraint 280 306 0.8000 1.0000 2.0000 0.0000 Constraint 280 295 0.8000 1.0000 2.0000 0.0000 Constraint 280 287 0.8000 1.0000 2.0000 0.0000 Constraint 274 691 0.8000 1.0000 2.0000 0.0000 Constraint 274 680 0.8000 1.0000 2.0000 0.0000 Constraint 274 673 0.8000 1.0000 2.0000 0.0000 Constraint 274 667 0.8000 1.0000 2.0000 0.0000 Constraint 274 660 0.8000 1.0000 2.0000 0.0000 Constraint 274 649 0.8000 1.0000 2.0000 0.0000 Constraint 274 642 0.8000 1.0000 2.0000 0.0000 Constraint 274 634 0.8000 1.0000 2.0000 0.0000 Constraint 274 626 0.8000 1.0000 2.0000 0.0000 Constraint 274 615 0.8000 1.0000 2.0000 0.0000 Constraint 274 610 0.8000 1.0000 2.0000 0.0000 Constraint 274 601 0.8000 1.0000 2.0000 0.0000 Constraint 274 593 0.8000 1.0000 2.0000 0.0000 Constraint 274 584 0.8000 1.0000 2.0000 0.0000 Constraint 274 573 0.8000 1.0000 2.0000 0.0000 Constraint 274 568 0.8000 1.0000 2.0000 0.0000 Constraint 274 559 0.8000 1.0000 2.0000 0.0000 Constraint 274 551 0.8000 1.0000 2.0000 0.0000 Constraint 274 545 0.8000 1.0000 2.0000 0.0000 Constraint 274 540 0.8000 1.0000 2.0000 0.0000 Constraint 274 533 0.8000 1.0000 2.0000 0.0000 Constraint 274 526 0.8000 1.0000 2.0000 0.0000 Constraint 274 517 0.8000 1.0000 2.0000 0.0000 Constraint 274 512 0.8000 1.0000 2.0000 0.0000 Constraint 274 502 0.8000 1.0000 2.0000 0.0000 Constraint 274 491 0.8000 1.0000 2.0000 0.0000 Constraint 274 483 0.8000 1.0000 2.0000 0.0000 Constraint 274 470 0.8000 1.0000 2.0000 0.0000 Constraint 274 463 0.8000 1.0000 2.0000 0.0000 Constraint 274 455 0.8000 1.0000 2.0000 0.0000 Constraint 274 446 0.8000 1.0000 2.0000 0.0000 Constraint 274 434 0.8000 1.0000 2.0000 0.0000 Constraint 274 427 0.8000 1.0000 2.0000 0.0000 Constraint 274 418 0.8000 1.0000 2.0000 0.0000 Constraint 274 410 0.8000 1.0000 2.0000 0.0000 Constraint 274 402 0.8000 1.0000 2.0000 0.0000 Constraint 274 391 0.8000 1.0000 2.0000 0.0000 Constraint 274 383 0.8000 1.0000 2.0000 0.0000 Constraint 274 374 0.8000 1.0000 2.0000 0.0000 Constraint 274 350 0.8000 1.0000 2.0000 0.0000 Constraint 274 340 0.8000 1.0000 2.0000 0.0000 Constraint 274 329 0.8000 1.0000 2.0000 0.0000 Constraint 274 324 0.8000 1.0000 2.0000 0.0000 Constraint 274 319 0.8000 1.0000 2.0000 0.0000 Constraint 274 312 0.8000 1.0000 2.0000 0.0000 Constraint 274 306 0.8000 1.0000 2.0000 0.0000 Constraint 274 295 0.8000 1.0000 2.0000 0.0000 Constraint 274 287 0.8000 1.0000 2.0000 0.0000 Constraint 274 280 0.8000 1.0000 2.0000 0.0000 Constraint 263 691 0.8000 1.0000 2.0000 0.0000 Constraint 263 680 0.8000 1.0000 2.0000 0.0000 Constraint 263 673 0.8000 1.0000 2.0000 0.0000 Constraint 263 667 0.8000 1.0000 2.0000 0.0000 Constraint 263 660 0.8000 1.0000 2.0000 0.0000 Constraint 263 649 0.8000 1.0000 2.0000 0.0000 Constraint 263 642 0.8000 1.0000 2.0000 0.0000 Constraint 263 634 0.8000 1.0000 2.0000 0.0000 Constraint 263 626 0.8000 1.0000 2.0000 0.0000 Constraint 263 615 0.8000 1.0000 2.0000 0.0000 Constraint 263 610 0.8000 1.0000 2.0000 0.0000 Constraint 263 601 0.8000 1.0000 2.0000 0.0000 Constraint 263 593 0.8000 1.0000 2.0000 0.0000 Constraint 263 584 0.8000 1.0000 2.0000 0.0000 Constraint 263 573 0.8000 1.0000 2.0000 0.0000 Constraint 263 568 0.8000 1.0000 2.0000 0.0000 Constraint 263 559 0.8000 1.0000 2.0000 0.0000 Constraint 263 551 0.8000 1.0000 2.0000 0.0000 Constraint 263 545 0.8000 1.0000 2.0000 0.0000 Constraint 263 540 0.8000 1.0000 2.0000 0.0000 Constraint 263 533 0.8000 1.0000 2.0000 0.0000 Constraint 263 526 0.8000 1.0000 2.0000 0.0000 Constraint 263 517 0.8000 1.0000 2.0000 0.0000 Constraint 263 512 0.8000 1.0000 2.0000 0.0000 Constraint 263 502 0.8000 1.0000 2.0000 0.0000 Constraint 263 491 0.8000 1.0000 2.0000 0.0000 Constraint 263 483 0.8000 1.0000 2.0000 0.0000 Constraint 263 470 0.8000 1.0000 2.0000 0.0000 Constraint 263 463 0.8000 1.0000 2.0000 0.0000 Constraint 263 455 0.8000 1.0000 2.0000 0.0000 Constraint 263 446 0.8000 1.0000 2.0000 0.0000 Constraint 263 434 0.8000 1.0000 2.0000 0.0000 Constraint 263 427 0.8000 1.0000 2.0000 0.0000 Constraint 263 418 0.8000 1.0000 2.0000 0.0000 Constraint 263 410 0.8000 1.0000 2.0000 0.0000 Constraint 263 402 0.8000 1.0000 2.0000 0.0000 Constraint 263 391 0.8000 1.0000 2.0000 0.0000 Constraint 263 383 0.8000 1.0000 2.0000 0.0000 Constraint 263 358 0.8000 1.0000 2.0000 0.0000 Constraint 263 350 0.8000 1.0000 2.0000 0.0000 Constraint 263 340 0.8000 1.0000 2.0000 0.0000 Constraint 263 329 0.8000 1.0000 2.0000 0.0000 Constraint 263 324 0.8000 1.0000 2.0000 0.0000 Constraint 263 319 0.8000 1.0000 2.0000 0.0000 Constraint 263 312 0.8000 1.0000 2.0000 0.0000 Constraint 263 306 0.8000 1.0000 2.0000 0.0000 Constraint 263 295 0.8000 1.0000 2.0000 0.0000 Constraint 263 287 0.8000 1.0000 2.0000 0.0000 Constraint 263 280 0.8000 1.0000 2.0000 0.0000 Constraint 263 274 0.8000 1.0000 2.0000 0.0000 Constraint 255 691 0.8000 1.0000 2.0000 0.0000 Constraint 255 680 0.8000 1.0000 2.0000 0.0000 Constraint 255 673 0.8000 1.0000 2.0000 0.0000 Constraint 255 667 0.8000 1.0000 2.0000 0.0000 Constraint 255 660 0.8000 1.0000 2.0000 0.0000 Constraint 255 615 0.8000 1.0000 2.0000 0.0000 Constraint 255 610 0.8000 1.0000 2.0000 0.0000 Constraint 255 601 0.8000 1.0000 2.0000 0.0000 Constraint 255 593 0.8000 1.0000 2.0000 0.0000 Constraint 255 584 0.8000 1.0000 2.0000 0.0000 Constraint 255 573 0.8000 1.0000 2.0000 0.0000 Constraint 255 568 0.8000 1.0000 2.0000 0.0000 Constraint 255 559 0.8000 1.0000 2.0000 0.0000 Constraint 255 551 0.8000 1.0000 2.0000 0.0000 Constraint 255 545 0.8000 1.0000 2.0000 0.0000 Constraint 255 540 0.8000 1.0000 2.0000 0.0000 Constraint 255 533 0.8000 1.0000 2.0000 0.0000 Constraint 255 526 0.8000 1.0000 2.0000 0.0000 Constraint 255 517 0.8000 1.0000 2.0000 0.0000 Constraint 255 512 0.8000 1.0000 2.0000 0.0000 Constraint 255 502 0.8000 1.0000 2.0000 0.0000 Constraint 255 491 0.8000 1.0000 2.0000 0.0000 Constraint 255 483 0.8000 1.0000 2.0000 0.0000 Constraint 255 470 0.8000 1.0000 2.0000 0.0000 Constraint 255 463 0.8000 1.0000 2.0000 0.0000 Constraint 255 455 0.8000 1.0000 2.0000 0.0000 Constraint 255 446 0.8000 1.0000 2.0000 0.0000 Constraint 255 434 0.8000 1.0000 2.0000 0.0000 Constraint 255 427 0.8000 1.0000 2.0000 0.0000 Constraint 255 418 0.8000 1.0000 2.0000 0.0000 Constraint 255 410 0.8000 1.0000 2.0000 0.0000 Constraint 255 340 0.8000 1.0000 2.0000 0.0000 Constraint 255 329 0.8000 1.0000 2.0000 0.0000 Constraint 255 324 0.8000 1.0000 2.0000 0.0000 Constraint 255 312 0.8000 1.0000 2.0000 0.0000 Constraint 255 306 0.8000 1.0000 2.0000 0.0000 Constraint 255 295 0.8000 1.0000 2.0000 0.0000 Constraint 255 287 0.8000 1.0000 2.0000 0.0000 Constraint 255 280 0.8000 1.0000 2.0000 0.0000 Constraint 255 274 0.8000 1.0000 2.0000 0.0000 Constraint 255 263 0.8000 1.0000 2.0000 0.0000 Constraint 243 691 0.8000 1.0000 2.0000 0.0000 Constraint 243 680 0.8000 1.0000 2.0000 0.0000 Constraint 243 673 0.8000 1.0000 2.0000 0.0000 Constraint 243 634 0.8000 1.0000 2.0000 0.0000 Constraint 243 626 0.8000 1.0000 2.0000 0.0000 Constraint 243 615 0.8000 1.0000 2.0000 0.0000 Constraint 243 610 0.8000 1.0000 2.0000 0.0000 Constraint 243 601 0.8000 1.0000 2.0000 0.0000 Constraint 243 593 0.8000 1.0000 2.0000 0.0000 Constraint 243 584 0.8000 1.0000 2.0000 0.0000 Constraint 243 573 0.8000 1.0000 2.0000 0.0000 Constraint 243 568 0.8000 1.0000 2.0000 0.0000 Constraint 243 559 0.8000 1.0000 2.0000 0.0000 Constraint 243 551 0.8000 1.0000 2.0000 0.0000 Constraint 243 545 0.8000 1.0000 2.0000 0.0000 Constraint 243 540 0.8000 1.0000 2.0000 0.0000 Constraint 243 533 0.8000 1.0000 2.0000 0.0000 Constraint 243 526 0.8000 1.0000 2.0000 0.0000 Constraint 243 517 0.8000 1.0000 2.0000 0.0000 Constraint 243 512 0.8000 1.0000 2.0000 0.0000 Constraint 243 491 0.8000 1.0000 2.0000 0.0000 Constraint 243 470 0.8000 1.0000 2.0000 0.0000 Constraint 243 463 0.8000 1.0000 2.0000 0.0000 Constraint 243 455 0.8000 1.0000 2.0000 0.0000 Constraint 243 446 0.8000 1.0000 2.0000 0.0000 Constraint 243 434 0.8000 1.0000 2.0000 0.0000 Constraint 243 427 0.8000 1.0000 2.0000 0.0000 Constraint 243 418 0.8000 1.0000 2.0000 0.0000 Constraint 243 410 0.8000 1.0000 2.0000 0.0000 Constraint 243 358 0.8000 1.0000 2.0000 0.0000 Constraint 243 350 0.8000 1.0000 2.0000 0.0000 Constraint 243 340 0.8000 1.0000 2.0000 0.0000 Constraint 243 329 0.8000 1.0000 2.0000 0.0000 Constraint 243 324 0.8000 1.0000 2.0000 0.0000 Constraint 243 319 0.8000 1.0000 2.0000 0.0000 Constraint 243 312 0.8000 1.0000 2.0000 0.0000 Constraint 243 306 0.8000 1.0000 2.0000 0.0000 Constraint 243 295 0.8000 1.0000 2.0000 0.0000 Constraint 243 287 0.8000 1.0000 2.0000 0.0000 Constraint 243 280 0.8000 1.0000 2.0000 0.0000 Constraint 243 274 0.8000 1.0000 2.0000 0.0000 Constraint 243 263 0.8000 1.0000 2.0000 0.0000 Constraint 243 255 0.8000 1.0000 2.0000 0.0000 Constraint 234 691 0.8000 1.0000 2.0000 0.0000 Constraint 234 680 0.8000 1.0000 2.0000 0.0000 Constraint 234 673 0.8000 1.0000 2.0000 0.0000 Constraint 234 667 0.8000 1.0000 2.0000 0.0000 Constraint 234 660 0.8000 1.0000 2.0000 0.0000 Constraint 234 649 0.8000 1.0000 2.0000 0.0000 Constraint 234 642 0.8000 1.0000 2.0000 0.0000 Constraint 234 634 0.8000 1.0000 2.0000 0.0000 Constraint 234 626 0.8000 1.0000 2.0000 0.0000 Constraint 234 615 0.8000 1.0000 2.0000 0.0000 Constraint 234 610 0.8000 1.0000 2.0000 0.0000 Constraint 234 601 0.8000 1.0000 2.0000 0.0000 Constraint 234 593 0.8000 1.0000 2.0000 0.0000 Constraint 234 584 0.8000 1.0000 2.0000 0.0000 Constraint 234 573 0.8000 1.0000 2.0000 0.0000 Constraint 234 568 0.8000 1.0000 2.0000 0.0000 Constraint 234 559 0.8000 1.0000 2.0000 0.0000 Constraint 234 540 0.8000 1.0000 2.0000 0.0000 Constraint 234 455 0.8000 1.0000 2.0000 0.0000 Constraint 234 446 0.8000 1.0000 2.0000 0.0000 Constraint 234 434 0.8000 1.0000 2.0000 0.0000 Constraint 234 418 0.8000 1.0000 2.0000 0.0000 Constraint 234 383 0.8000 1.0000 2.0000 0.0000 Constraint 234 374 0.8000 1.0000 2.0000 0.0000 Constraint 234 369 0.8000 1.0000 2.0000 0.0000 Constraint 234 358 0.8000 1.0000 2.0000 0.0000 Constraint 234 350 0.8000 1.0000 2.0000 0.0000 Constraint 234 340 0.8000 1.0000 2.0000 0.0000 Constraint 234 329 0.8000 1.0000 2.0000 0.0000 Constraint 234 324 0.8000 1.0000 2.0000 0.0000 Constraint 234 319 0.8000 1.0000 2.0000 0.0000 Constraint 234 312 0.8000 1.0000 2.0000 0.0000 Constraint 234 306 0.8000 1.0000 2.0000 0.0000 Constraint 234 295 0.8000 1.0000 2.0000 0.0000 Constraint 234 287 0.8000 1.0000 2.0000 0.0000 Constraint 234 280 0.8000 1.0000 2.0000 0.0000 Constraint 234 274 0.8000 1.0000 2.0000 0.0000 Constraint 234 263 0.8000 1.0000 2.0000 0.0000 Constraint 234 255 0.8000 1.0000 2.0000 0.0000 Constraint 234 243 0.8000 1.0000 2.0000 0.0000 Constraint 223 691 0.8000 1.0000 2.0000 0.0000 Constraint 223 680 0.8000 1.0000 2.0000 0.0000 Constraint 223 673 0.8000 1.0000 2.0000 0.0000 Constraint 223 667 0.8000 1.0000 2.0000 0.0000 Constraint 223 642 0.8000 1.0000 2.0000 0.0000 Constraint 223 634 0.8000 1.0000 2.0000 0.0000 Constraint 223 626 0.8000 1.0000 2.0000 0.0000 Constraint 223 615 0.8000 1.0000 2.0000 0.0000 Constraint 223 610 0.8000 1.0000 2.0000 0.0000 Constraint 223 601 0.8000 1.0000 2.0000 0.0000 Constraint 223 593 0.8000 1.0000 2.0000 0.0000 Constraint 223 584 0.8000 1.0000 2.0000 0.0000 Constraint 223 573 0.8000 1.0000 2.0000 0.0000 Constraint 223 568 0.8000 1.0000 2.0000 0.0000 Constraint 223 559 0.8000 1.0000 2.0000 0.0000 Constraint 223 551 0.8000 1.0000 2.0000 0.0000 Constraint 223 545 0.8000 1.0000 2.0000 0.0000 Constraint 223 540 0.8000 1.0000 2.0000 0.0000 Constraint 223 533 0.8000 1.0000 2.0000 0.0000 Constraint 223 526 0.8000 1.0000 2.0000 0.0000 Constraint 223 517 0.8000 1.0000 2.0000 0.0000 Constraint 223 512 0.8000 1.0000 2.0000 0.0000 Constraint 223 446 0.8000 1.0000 2.0000 0.0000 Constraint 223 434 0.8000 1.0000 2.0000 0.0000 Constraint 223 427 0.8000 1.0000 2.0000 0.0000 Constraint 223 418 0.8000 1.0000 2.0000 0.0000 Constraint 223 383 0.8000 1.0000 2.0000 0.0000 Constraint 223 374 0.8000 1.0000 2.0000 0.0000 Constraint 223 369 0.8000 1.0000 2.0000 0.0000 Constraint 223 358 0.8000 1.0000 2.0000 0.0000 Constraint 223 350 0.8000 1.0000 2.0000 0.0000 Constraint 223 340 0.8000 1.0000 2.0000 0.0000 Constraint 223 329 0.8000 1.0000 2.0000 0.0000 Constraint 223 324 0.8000 1.0000 2.0000 0.0000 Constraint 223 319 0.8000 1.0000 2.0000 0.0000 Constraint 223 312 0.8000 1.0000 2.0000 0.0000 Constraint 223 306 0.8000 1.0000 2.0000 0.0000 Constraint 223 295 0.8000 1.0000 2.0000 0.0000 Constraint 223 287 0.8000 1.0000 2.0000 0.0000 Constraint 223 280 0.8000 1.0000 2.0000 0.0000 Constraint 223 274 0.8000 1.0000 2.0000 0.0000 Constraint 223 263 0.8000 1.0000 2.0000 0.0000 Constraint 223 255 0.8000 1.0000 2.0000 0.0000 Constraint 223 243 0.8000 1.0000 2.0000 0.0000 Constraint 223 234 0.8000 1.0000 2.0000 0.0000 Constraint 212 691 0.8000 1.0000 2.0000 0.0000 Constraint 212 680 0.8000 1.0000 2.0000 0.0000 Constraint 212 673 0.8000 1.0000 2.0000 0.0000 Constraint 212 642 0.8000 1.0000 2.0000 0.0000 Constraint 212 634 0.8000 1.0000 2.0000 0.0000 Constraint 212 626 0.8000 1.0000 2.0000 0.0000 Constraint 212 615 0.8000 1.0000 2.0000 0.0000 Constraint 212 610 0.8000 1.0000 2.0000 0.0000 Constraint 212 601 0.8000 1.0000 2.0000 0.0000 Constraint 212 593 0.8000 1.0000 2.0000 0.0000 Constraint 212 584 0.8000 1.0000 2.0000 0.0000 Constraint 212 573 0.8000 1.0000 2.0000 0.0000 Constraint 212 568 0.8000 1.0000 2.0000 0.0000 Constraint 212 559 0.8000 1.0000 2.0000 0.0000 Constraint 212 551 0.8000 1.0000 2.0000 0.0000 Constraint 212 545 0.8000 1.0000 2.0000 0.0000 Constraint 212 540 0.8000 1.0000 2.0000 0.0000 Constraint 212 533 0.8000 1.0000 2.0000 0.0000 Constraint 212 517 0.8000 1.0000 2.0000 0.0000 Constraint 212 512 0.8000 1.0000 2.0000 0.0000 Constraint 212 446 0.8000 1.0000 2.0000 0.0000 Constraint 212 434 0.8000 1.0000 2.0000 0.0000 Constraint 212 427 0.8000 1.0000 2.0000 0.0000 Constraint 212 418 0.8000 1.0000 2.0000 0.0000 Constraint 212 402 0.8000 1.0000 2.0000 0.0000 Constraint 212 383 0.8000 1.0000 2.0000 0.0000 Constraint 212 374 0.8000 1.0000 2.0000 0.0000 Constraint 212 369 0.8000 1.0000 2.0000 0.0000 Constraint 212 358 0.8000 1.0000 2.0000 0.0000 Constraint 212 350 0.8000 1.0000 2.0000 0.0000 Constraint 212 340 0.8000 1.0000 2.0000 0.0000 Constraint 212 329 0.8000 1.0000 2.0000 0.0000 Constraint 212 324 0.8000 1.0000 2.0000 0.0000 Constraint 212 319 0.8000 1.0000 2.0000 0.0000 Constraint 212 312 0.8000 1.0000 2.0000 0.0000 Constraint 212 306 0.8000 1.0000 2.0000 0.0000 Constraint 212 295 0.8000 1.0000 2.0000 0.0000 Constraint 212 287 0.8000 1.0000 2.0000 0.0000 Constraint 212 280 0.8000 1.0000 2.0000 0.0000 Constraint 212 274 0.8000 1.0000 2.0000 0.0000 Constraint 212 263 0.8000 1.0000 2.0000 0.0000 Constraint 212 255 0.8000 1.0000 2.0000 0.0000 Constraint 212 243 0.8000 1.0000 2.0000 0.0000 Constraint 212 234 0.8000 1.0000 2.0000 0.0000 Constraint 212 223 0.8000 1.0000 2.0000 0.0000 Constraint 206 691 0.8000 1.0000 2.0000 0.0000 Constraint 206 680 0.8000 1.0000 2.0000 0.0000 Constraint 206 673 0.8000 1.0000 2.0000 0.0000 Constraint 206 634 0.8000 1.0000 2.0000 0.0000 Constraint 206 626 0.8000 1.0000 2.0000 0.0000 Constraint 206 615 0.8000 1.0000 2.0000 0.0000 Constraint 206 610 0.8000 1.0000 2.0000 0.0000 Constraint 206 601 0.8000 1.0000 2.0000 0.0000 Constraint 206 593 0.8000 1.0000 2.0000 0.0000 Constraint 206 584 0.8000 1.0000 2.0000 0.0000 Constraint 206 573 0.8000 1.0000 2.0000 0.0000 Constraint 206 568 0.8000 1.0000 2.0000 0.0000 Constraint 206 559 0.8000 1.0000 2.0000 0.0000 Constraint 206 551 0.8000 1.0000 2.0000 0.0000 Constraint 206 545 0.8000 1.0000 2.0000 0.0000 Constraint 206 540 0.8000 1.0000 2.0000 0.0000 Constraint 206 533 0.8000 1.0000 2.0000 0.0000 Constraint 206 455 0.8000 1.0000 2.0000 0.0000 Constraint 206 446 0.8000 1.0000 2.0000 0.0000 Constraint 206 434 0.8000 1.0000 2.0000 0.0000 Constraint 206 427 0.8000 1.0000 2.0000 0.0000 Constraint 206 418 0.8000 1.0000 2.0000 0.0000 Constraint 206 383 0.8000 1.0000 2.0000 0.0000 Constraint 206 369 0.8000 1.0000 2.0000 0.0000 Constraint 206 358 0.8000 1.0000 2.0000 0.0000 Constraint 206 350 0.8000 1.0000 2.0000 0.0000 Constraint 206 340 0.8000 1.0000 2.0000 0.0000 Constraint 206 329 0.8000 1.0000 2.0000 0.0000 Constraint 206 324 0.8000 1.0000 2.0000 0.0000 Constraint 206 319 0.8000 1.0000 2.0000 0.0000 Constraint 206 312 0.8000 1.0000 2.0000 0.0000 Constraint 206 306 0.8000 1.0000 2.0000 0.0000 Constraint 206 295 0.8000 1.0000 2.0000 0.0000 Constraint 206 287 0.8000 1.0000 2.0000 0.0000 Constraint 206 280 0.8000 1.0000 2.0000 0.0000 Constraint 206 274 0.8000 1.0000 2.0000 0.0000 Constraint 206 263 0.8000 1.0000 2.0000 0.0000 Constraint 206 255 0.8000 1.0000 2.0000 0.0000 Constraint 206 243 0.8000 1.0000 2.0000 0.0000 Constraint 206 234 0.8000 1.0000 2.0000 0.0000 Constraint 206 223 0.8000 1.0000 2.0000 0.0000 Constraint 206 212 0.8000 1.0000 2.0000 0.0000 Constraint 197 691 0.8000 1.0000 2.0000 0.0000 Constraint 197 680 0.8000 1.0000 2.0000 0.0000 Constraint 197 673 0.8000 1.0000 2.0000 0.0000 Constraint 197 642 0.8000 1.0000 2.0000 0.0000 Constraint 197 634 0.8000 1.0000 2.0000 0.0000 Constraint 197 626 0.8000 1.0000 2.0000 0.0000 Constraint 197 615 0.8000 1.0000 2.0000 0.0000 Constraint 197 610 0.8000 1.0000 2.0000 0.0000 Constraint 197 601 0.8000 1.0000 2.0000 0.0000 Constraint 197 593 0.8000 1.0000 2.0000 0.0000 Constraint 197 584 0.8000 1.0000 2.0000 0.0000 Constraint 197 573 0.8000 1.0000 2.0000 0.0000 Constraint 197 568 0.8000 1.0000 2.0000 0.0000 Constraint 197 559 0.8000 1.0000 2.0000 0.0000 Constraint 197 551 0.8000 1.0000 2.0000 0.0000 Constraint 197 545 0.8000 1.0000 2.0000 0.0000 Constraint 197 540 0.8000 1.0000 2.0000 0.0000 Constraint 197 533 0.8000 1.0000 2.0000 0.0000 Constraint 197 455 0.8000 1.0000 2.0000 0.0000 Constraint 197 446 0.8000 1.0000 2.0000 0.0000 Constraint 197 434 0.8000 1.0000 2.0000 0.0000 Constraint 197 427 0.8000 1.0000 2.0000 0.0000 Constraint 197 418 0.8000 1.0000 2.0000 0.0000 Constraint 197 358 0.8000 1.0000 2.0000 0.0000 Constraint 197 350 0.8000 1.0000 2.0000 0.0000 Constraint 197 340 0.8000 1.0000 2.0000 0.0000 Constraint 197 329 0.8000 1.0000 2.0000 0.0000 Constraint 197 324 0.8000 1.0000 2.0000 0.0000 Constraint 197 319 0.8000 1.0000 2.0000 0.0000 Constraint 197 312 0.8000 1.0000 2.0000 0.0000 Constraint 197 306 0.8000 1.0000 2.0000 0.0000 Constraint 197 295 0.8000 1.0000 2.0000 0.0000 Constraint 197 287 0.8000 1.0000 2.0000 0.0000 Constraint 197 280 0.8000 1.0000 2.0000 0.0000 Constraint 197 274 0.8000 1.0000 2.0000 0.0000 Constraint 197 263 0.8000 1.0000 2.0000 0.0000 Constraint 197 255 0.8000 1.0000 2.0000 0.0000 Constraint 197 243 0.8000 1.0000 2.0000 0.0000 Constraint 197 234 0.8000 1.0000 2.0000 0.0000 Constraint 197 223 0.8000 1.0000 2.0000 0.0000 Constraint 197 212 0.8000 1.0000 2.0000 0.0000 Constraint 197 206 0.8000 1.0000 2.0000 0.0000 Constraint 189 691 0.8000 1.0000 2.0000 0.0000 Constraint 189 680 0.8000 1.0000 2.0000 0.0000 Constraint 189 673 0.8000 1.0000 2.0000 0.0000 Constraint 189 667 0.8000 1.0000 2.0000 0.0000 Constraint 189 634 0.8000 1.0000 2.0000 0.0000 Constraint 189 626 0.8000 1.0000 2.0000 0.0000 Constraint 189 615 0.8000 1.0000 2.0000 0.0000 Constraint 189 610 0.8000 1.0000 2.0000 0.0000 Constraint 189 601 0.8000 1.0000 2.0000 0.0000 Constraint 189 593 0.8000 1.0000 2.0000 0.0000 Constraint 189 584 0.8000 1.0000 2.0000 0.0000 Constraint 189 573 0.8000 1.0000 2.0000 0.0000 Constraint 189 568 0.8000 1.0000 2.0000 0.0000 Constraint 189 559 0.8000 1.0000 2.0000 0.0000 Constraint 189 551 0.8000 1.0000 2.0000 0.0000 Constraint 189 545 0.8000 1.0000 2.0000 0.0000 Constraint 189 540 0.8000 1.0000 2.0000 0.0000 Constraint 189 455 0.8000 1.0000 2.0000 0.0000 Constraint 189 446 0.8000 1.0000 2.0000 0.0000 Constraint 189 434 0.8000 1.0000 2.0000 0.0000 Constraint 189 427 0.8000 1.0000 2.0000 0.0000 Constraint 189 418 0.8000 1.0000 2.0000 0.0000 Constraint 189 410 0.8000 1.0000 2.0000 0.0000 Constraint 189 383 0.8000 1.0000 2.0000 0.0000 Constraint 189 369 0.8000 1.0000 2.0000 0.0000 Constraint 189 358 0.8000 1.0000 2.0000 0.0000 Constraint 189 350 0.8000 1.0000 2.0000 0.0000 Constraint 189 340 0.8000 1.0000 2.0000 0.0000 Constraint 189 329 0.8000 1.0000 2.0000 0.0000 Constraint 189 324 0.8000 1.0000 2.0000 0.0000 Constraint 189 319 0.8000 1.0000 2.0000 0.0000 Constraint 189 312 0.8000 1.0000 2.0000 0.0000 Constraint 189 306 0.8000 1.0000 2.0000 0.0000 Constraint 189 295 0.8000 1.0000 2.0000 0.0000 Constraint 189 287 0.8000 1.0000 2.0000 0.0000 Constraint 189 280 0.8000 1.0000 2.0000 0.0000 Constraint 189 274 0.8000 1.0000 2.0000 0.0000 Constraint 189 255 0.8000 1.0000 2.0000 0.0000 Constraint 189 243 0.8000 1.0000 2.0000 0.0000 Constraint 189 234 0.8000 1.0000 2.0000 0.0000 Constraint 189 223 0.8000 1.0000 2.0000 0.0000 Constraint 189 212 0.8000 1.0000 2.0000 0.0000 Constraint 189 206 0.8000 1.0000 2.0000 0.0000 Constraint 189 197 0.8000 1.0000 2.0000 0.0000 Constraint 183 691 0.8000 1.0000 2.0000 0.0000 Constraint 183 680 0.8000 1.0000 2.0000 0.0000 Constraint 183 673 0.8000 1.0000 2.0000 0.0000 Constraint 183 667 0.8000 1.0000 2.0000 0.0000 Constraint 183 649 0.8000 1.0000 2.0000 0.0000 Constraint 183 642 0.8000 1.0000 2.0000 0.0000 Constraint 183 634 0.8000 1.0000 2.0000 0.0000 Constraint 183 626 0.8000 1.0000 2.0000 0.0000 Constraint 183 615 0.8000 1.0000 2.0000 0.0000 Constraint 183 610 0.8000 1.0000 2.0000 0.0000 Constraint 183 601 0.8000 1.0000 2.0000 0.0000 Constraint 183 593 0.8000 1.0000 2.0000 0.0000 Constraint 183 584 0.8000 1.0000 2.0000 0.0000 Constraint 183 573 0.8000 1.0000 2.0000 0.0000 Constraint 183 568 0.8000 1.0000 2.0000 0.0000 Constraint 183 559 0.8000 1.0000 2.0000 0.0000 Constraint 183 545 0.8000 1.0000 2.0000 0.0000 Constraint 183 540 0.8000 1.0000 2.0000 0.0000 Constraint 183 517 0.8000 1.0000 2.0000 0.0000 Constraint 183 455 0.8000 1.0000 2.0000 0.0000 Constraint 183 446 0.8000 1.0000 2.0000 0.0000 Constraint 183 434 0.8000 1.0000 2.0000 0.0000 Constraint 183 427 0.8000 1.0000 2.0000 0.0000 Constraint 183 418 0.8000 1.0000 2.0000 0.0000 Constraint 183 410 0.8000 1.0000 2.0000 0.0000 Constraint 183 383 0.8000 1.0000 2.0000 0.0000 Constraint 183 358 0.8000 1.0000 2.0000 0.0000 Constraint 183 350 0.8000 1.0000 2.0000 0.0000 Constraint 183 340 0.8000 1.0000 2.0000 0.0000 Constraint 183 329 0.8000 1.0000 2.0000 0.0000 Constraint 183 324 0.8000 1.0000 2.0000 0.0000 Constraint 183 319 0.8000 1.0000 2.0000 0.0000 Constraint 183 312 0.8000 1.0000 2.0000 0.0000 Constraint 183 306 0.8000 1.0000 2.0000 0.0000 Constraint 183 295 0.8000 1.0000 2.0000 0.0000 Constraint 183 287 0.8000 1.0000 2.0000 0.0000 Constraint 183 243 0.8000 1.0000 2.0000 0.0000 Constraint 183 234 0.8000 1.0000 2.0000 0.0000 Constraint 183 223 0.8000 1.0000 2.0000 0.0000 Constraint 183 212 0.8000 1.0000 2.0000 0.0000 Constraint 183 206 0.8000 1.0000 2.0000 0.0000 Constraint 183 197 0.8000 1.0000 2.0000 0.0000 Constraint 183 189 0.8000 1.0000 2.0000 0.0000 Constraint 173 691 0.8000 1.0000 2.0000 0.0000 Constraint 173 680 0.8000 1.0000 2.0000 0.0000 Constraint 173 673 0.8000 1.0000 2.0000 0.0000 Constraint 173 667 0.8000 1.0000 2.0000 0.0000 Constraint 173 660 0.8000 1.0000 2.0000 0.0000 Constraint 173 649 0.8000 1.0000 2.0000 0.0000 Constraint 173 642 0.8000 1.0000 2.0000 0.0000 Constraint 173 634 0.8000 1.0000 2.0000 0.0000 Constraint 173 626 0.8000 1.0000 2.0000 0.0000 Constraint 173 615 0.8000 1.0000 2.0000 0.0000 Constraint 173 610 0.8000 1.0000 2.0000 0.0000 Constraint 173 601 0.8000 1.0000 2.0000 0.0000 Constraint 173 593 0.8000 1.0000 2.0000 0.0000 Constraint 173 584 0.8000 1.0000 2.0000 0.0000 Constraint 173 573 0.8000 1.0000 2.0000 0.0000 Constraint 173 568 0.8000 1.0000 2.0000 0.0000 Constraint 173 559 0.8000 1.0000 2.0000 0.0000 Constraint 173 545 0.8000 1.0000 2.0000 0.0000 Constraint 173 540 0.8000 1.0000 2.0000 0.0000 Constraint 173 517 0.8000 1.0000 2.0000 0.0000 Constraint 173 512 0.8000 1.0000 2.0000 0.0000 Constraint 173 491 0.8000 1.0000 2.0000 0.0000 Constraint 173 470 0.8000 1.0000 2.0000 0.0000 Constraint 173 463 0.8000 1.0000 2.0000 0.0000 Constraint 173 455 0.8000 1.0000 2.0000 0.0000 Constraint 173 446 0.8000 1.0000 2.0000 0.0000 Constraint 173 434 0.8000 1.0000 2.0000 0.0000 Constraint 173 427 0.8000 1.0000 2.0000 0.0000 Constraint 173 418 0.8000 1.0000 2.0000 0.0000 Constraint 173 410 0.8000 1.0000 2.0000 0.0000 Constraint 173 383 0.8000 1.0000 2.0000 0.0000 Constraint 173 369 0.8000 1.0000 2.0000 0.0000 Constraint 173 358 0.8000 1.0000 2.0000 0.0000 Constraint 173 340 0.8000 1.0000 2.0000 0.0000 Constraint 173 329 0.8000 1.0000 2.0000 0.0000 Constraint 173 295 0.8000 1.0000 2.0000 0.0000 Constraint 173 234 0.8000 1.0000 2.0000 0.0000 Constraint 173 223 0.8000 1.0000 2.0000 0.0000 Constraint 173 212 0.8000 1.0000 2.0000 0.0000 Constraint 173 206 0.8000 1.0000 2.0000 0.0000 Constraint 173 197 0.8000 1.0000 2.0000 0.0000 Constraint 173 189 0.8000 1.0000 2.0000 0.0000 Constraint 173 183 0.8000 1.0000 2.0000 0.0000 Constraint 165 691 0.8000 1.0000 2.0000 0.0000 Constraint 165 680 0.8000 1.0000 2.0000 0.0000 Constraint 165 673 0.8000 1.0000 2.0000 0.0000 Constraint 165 667 0.8000 1.0000 2.0000 0.0000 Constraint 165 660 0.8000 1.0000 2.0000 0.0000 Constraint 165 649 0.8000 1.0000 2.0000 0.0000 Constraint 165 642 0.8000 1.0000 2.0000 0.0000 Constraint 165 634 0.8000 1.0000 2.0000 0.0000 Constraint 165 626 0.8000 1.0000 2.0000 0.0000 Constraint 165 615 0.8000 1.0000 2.0000 0.0000 Constraint 165 610 0.8000 1.0000 2.0000 0.0000 Constraint 165 601 0.8000 1.0000 2.0000 0.0000 Constraint 165 593 0.8000 1.0000 2.0000 0.0000 Constraint 165 584 0.8000 1.0000 2.0000 0.0000 Constraint 165 573 0.8000 1.0000 2.0000 0.0000 Constraint 165 568 0.8000 1.0000 2.0000 0.0000 Constraint 165 559 0.8000 1.0000 2.0000 0.0000 Constraint 165 545 0.8000 1.0000 2.0000 0.0000 Constraint 165 540 0.8000 1.0000 2.0000 0.0000 Constraint 165 491 0.8000 1.0000 2.0000 0.0000 Constraint 165 470 0.8000 1.0000 2.0000 0.0000 Constraint 165 455 0.8000 1.0000 2.0000 0.0000 Constraint 165 446 0.8000 1.0000 2.0000 0.0000 Constraint 165 434 0.8000 1.0000 2.0000 0.0000 Constraint 165 418 0.8000 1.0000 2.0000 0.0000 Constraint 165 410 0.8000 1.0000 2.0000 0.0000 Constraint 165 391 0.8000 1.0000 2.0000 0.0000 Constraint 165 383 0.8000 1.0000 2.0000 0.0000 Constraint 165 369 0.8000 1.0000 2.0000 0.0000 Constraint 165 358 0.8000 1.0000 2.0000 0.0000 Constraint 165 340 0.8000 1.0000 2.0000 0.0000 Constraint 165 329 0.8000 1.0000 2.0000 0.0000 Constraint 165 295 0.8000 1.0000 2.0000 0.0000 Constraint 165 223 0.8000 1.0000 2.0000 0.0000 Constraint 165 212 0.8000 1.0000 2.0000 0.0000 Constraint 165 206 0.8000 1.0000 2.0000 0.0000 Constraint 165 197 0.8000 1.0000 2.0000 0.0000 Constraint 165 189 0.8000 1.0000 2.0000 0.0000 Constraint 165 183 0.8000 1.0000 2.0000 0.0000 Constraint 165 173 0.8000 1.0000 2.0000 0.0000 Constraint 157 691 0.8000 1.0000 2.0000 0.0000 Constraint 157 680 0.8000 1.0000 2.0000 0.0000 Constraint 157 673 0.8000 1.0000 2.0000 0.0000 Constraint 157 667 0.8000 1.0000 2.0000 0.0000 Constraint 157 660 0.8000 1.0000 2.0000 0.0000 Constraint 157 649 0.8000 1.0000 2.0000 0.0000 Constraint 157 642 0.8000 1.0000 2.0000 0.0000 Constraint 157 634 0.8000 1.0000 2.0000 0.0000 Constraint 157 626 0.8000 1.0000 2.0000 0.0000 Constraint 157 615 0.8000 1.0000 2.0000 0.0000 Constraint 157 601 0.8000 1.0000 2.0000 0.0000 Constraint 157 593 0.8000 1.0000 2.0000 0.0000 Constraint 157 584 0.8000 1.0000 2.0000 0.0000 Constraint 157 573 0.8000 1.0000 2.0000 0.0000 Constraint 157 568 0.8000 1.0000 2.0000 0.0000 Constraint 157 559 0.8000 1.0000 2.0000 0.0000 Constraint 157 545 0.8000 1.0000 2.0000 0.0000 Constraint 157 540 0.8000 1.0000 2.0000 0.0000 Constraint 157 517 0.8000 1.0000 2.0000 0.0000 Constraint 157 512 0.8000 1.0000 2.0000 0.0000 Constraint 157 491 0.8000 1.0000 2.0000 0.0000 Constraint 157 483 0.8000 1.0000 2.0000 0.0000 Constraint 157 470 0.8000 1.0000 2.0000 0.0000 Constraint 157 463 0.8000 1.0000 2.0000 0.0000 Constraint 157 455 0.8000 1.0000 2.0000 0.0000 Constraint 157 446 0.8000 1.0000 2.0000 0.0000 Constraint 157 434 0.8000 1.0000 2.0000 0.0000 Constraint 157 427 0.8000 1.0000 2.0000 0.0000 Constraint 157 418 0.8000 1.0000 2.0000 0.0000 Constraint 157 410 0.8000 1.0000 2.0000 0.0000 Constraint 157 391 0.8000 1.0000 2.0000 0.0000 Constraint 157 383 0.8000 1.0000 2.0000 0.0000 Constraint 157 374 0.8000 1.0000 2.0000 0.0000 Constraint 157 358 0.8000 1.0000 2.0000 0.0000 Constraint 157 340 0.8000 1.0000 2.0000 0.0000 Constraint 157 329 0.8000 1.0000 2.0000 0.0000 Constraint 157 223 0.8000 1.0000 2.0000 0.0000 Constraint 157 212 0.8000 1.0000 2.0000 0.0000 Constraint 157 206 0.8000 1.0000 2.0000 0.0000 Constraint 157 197 0.8000 1.0000 2.0000 0.0000 Constraint 157 189 0.8000 1.0000 2.0000 0.0000 Constraint 157 183 0.8000 1.0000 2.0000 0.0000 Constraint 157 173 0.8000 1.0000 2.0000 0.0000 Constraint 157 165 0.8000 1.0000 2.0000 0.0000 Constraint 146 691 0.8000 1.0000 2.0000 0.0000 Constraint 146 680 0.8000 1.0000 2.0000 0.0000 Constraint 146 673 0.8000 1.0000 2.0000 0.0000 Constraint 146 667 0.8000 1.0000 2.0000 0.0000 Constraint 146 660 0.8000 1.0000 2.0000 0.0000 Constraint 146 649 0.8000 1.0000 2.0000 0.0000 Constraint 146 642 0.8000 1.0000 2.0000 0.0000 Constraint 146 610 0.8000 1.0000 2.0000 0.0000 Constraint 146 601 0.8000 1.0000 2.0000 0.0000 Constraint 146 593 0.8000 1.0000 2.0000 0.0000 Constraint 146 584 0.8000 1.0000 2.0000 0.0000 Constraint 146 573 0.8000 1.0000 2.0000 0.0000 Constraint 146 568 0.8000 1.0000 2.0000 0.0000 Constraint 146 545 0.8000 1.0000 2.0000 0.0000 Constraint 146 540 0.8000 1.0000 2.0000 0.0000 Constraint 146 517 0.8000 1.0000 2.0000 0.0000 Constraint 146 512 0.8000 1.0000 2.0000 0.0000 Constraint 146 491 0.8000 1.0000 2.0000 0.0000 Constraint 146 483 0.8000 1.0000 2.0000 0.0000 Constraint 146 470 0.8000 1.0000 2.0000 0.0000 Constraint 146 463 0.8000 1.0000 2.0000 0.0000 Constraint 146 455 0.8000 1.0000 2.0000 0.0000 Constraint 146 446 0.8000 1.0000 2.0000 0.0000 Constraint 146 434 0.8000 1.0000 2.0000 0.0000 Constraint 146 427 0.8000 1.0000 2.0000 0.0000 Constraint 146 418 0.8000 1.0000 2.0000 0.0000 Constraint 146 410 0.8000 1.0000 2.0000 0.0000 Constraint 146 391 0.8000 1.0000 2.0000 0.0000 Constraint 146 383 0.8000 1.0000 2.0000 0.0000 Constraint 146 374 0.8000 1.0000 2.0000 0.0000 Constraint 146 340 0.8000 1.0000 2.0000 0.0000 Constraint 146 223 0.8000 1.0000 2.0000 0.0000 Constraint 146 212 0.8000 1.0000 2.0000 0.0000 Constraint 146 206 0.8000 1.0000 2.0000 0.0000 Constraint 146 197 0.8000 1.0000 2.0000 0.0000 Constraint 146 189 0.8000 1.0000 2.0000 0.0000 Constraint 146 183 0.8000 1.0000 2.0000 0.0000 Constraint 146 173 0.8000 1.0000 2.0000 0.0000 Constraint 146 165 0.8000 1.0000 2.0000 0.0000 Constraint 146 157 0.8000 1.0000 2.0000 0.0000 Constraint 130 691 0.8000 1.0000 2.0000 0.0000 Constraint 130 680 0.8000 1.0000 2.0000 0.0000 Constraint 130 673 0.8000 1.0000 2.0000 0.0000 Constraint 130 667 0.8000 1.0000 2.0000 0.0000 Constraint 130 660 0.8000 1.0000 2.0000 0.0000 Constraint 130 649 0.8000 1.0000 2.0000 0.0000 Constraint 130 601 0.8000 1.0000 2.0000 0.0000 Constraint 130 593 0.8000 1.0000 2.0000 0.0000 Constraint 130 568 0.8000 1.0000 2.0000 0.0000 Constraint 130 545 0.8000 1.0000 2.0000 0.0000 Constraint 130 533 0.8000 1.0000 2.0000 0.0000 Constraint 130 517 0.8000 1.0000 2.0000 0.0000 Constraint 130 483 0.8000 1.0000 2.0000 0.0000 Constraint 130 470 0.8000 1.0000 2.0000 0.0000 Constraint 130 463 0.8000 1.0000 2.0000 0.0000 Constraint 130 455 0.8000 1.0000 2.0000 0.0000 Constraint 130 446 0.8000 1.0000 2.0000 0.0000 Constraint 130 418 0.8000 1.0000 2.0000 0.0000 Constraint 130 410 0.8000 1.0000 2.0000 0.0000 Constraint 130 391 0.8000 1.0000 2.0000 0.0000 Constraint 130 383 0.8000 1.0000 2.0000 0.0000 Constraint 130 374 0.8000 1.0000 2.0000 0.0000 Constraint 130 369 0.8000 1.0000 2.0000 0.0000 Constraint 130 358 0.8000 1.0000 2.0000 0.0000 Constraint 130 340 0.8000 1.0000 2.0000 0.0000 Constraint 130 329 0.8000 1.0000 2.0000 0.0000 Constraint 130 274 0.8000 1.0000 2.0000 0.0000 Constraint 130 263 0.8000 1.0000 2.0000 0.0000 Constraint 130 234 0.8000 1.0000 2.0000 0.0000 Constraint 130 223 0.8000 1.0000 2.0000 0.0000 Constraint 130 197 0.8000 1.0000 2.0000 0.0000 Constraint 130 189 0.8000 1.0000 2.0000 0.0000 Constraint 130 183 0.8000 1.0000 2.0000 0.0000 Constraint 130 173 0.8000 1.0000 2.0000 0.0000 Constraint 130 165 0.8000 1.0000 2.0000 0.0000 Constraint 130 157 0.8000 1.0000 2.0000 0.0000 Constraint 130 146 0.8000 1.0000 2.0000 0.0000 Constraint 117 691 0.8000 1.0000 2.0000 0.0000 Constraint 117 680 0.8000 1.0000 2.0000 0.0000 Constraint 117 673 0.8000 1.0000 2.0000 0.0000 Constraint 117 667 0.8000 1.0000 2.0000 0.0000 Constraint 117 660 0.8000 1.0000 2.0000 0.0000 Constraint 117 649 0.8000 1.0000 2.0000 0.0000 Constraint 117 642 0.8000 1.0000 2.0000 0.0000 Constraint 117 634 0.8000 1.0000 2.0000 0.0000 Constraint 117 626 0.8000 1.0000 2.0000 0.0000 Constraint 117 615 0.8000 1.0000 2.0000 0.0000 Constraint 117 470 0.8000 1.0000 2.0000 0.0000 Constraint 117 463 0.8000 1.0000 2.0000 0.0000 Constraint 117 455 0.8000 1.0000 2.0000 0.0000 Constraint 117 446 0.8000 1.0000 2.0000 0.0000 Constraint 117 434 0.8000 1.0000 2.0000 0.0000 Constraint 117 427 0.8000 1.0000 2.0000 0.0000 Constraint 117 418 0.8000 1.0000 2.0000 0.0000 Constraint 117 410 0.8000 1.0000 2.0000 0.0000 Constraint 117 402 0.8000 1.0000 2.0000 0.0000 Constraint 117 391 0.8000 1.0000 2.0000 0.0000 Constraint 117 383 0.8000 1.0000 2.0000 0.0000 Constraint 117 374 0.8000 1.0000 2.0000 0.0000 Constraint 117 369 0.8000 1.0000 2.0000 0.0000 Constraint 117 358 0.8000 1.0000 2.0000 0.0000 Constraint 117 350 0.8000 1.0000 2.0000 0.0000 Constraint 117 340 0.8000 1.0000 2.0000 0.0000 Constraint 117 329 0.8000 1.0000 2.0000 0.0000 Constraint 117 324 0.8000 1.0000 2.0000 0.0000 Constraint 117 319 0.8000 1.0000 2.0000 0.0000 Constraint 117 295 0.8000 1.0000 2.0000 0.0000 Constraint 117 280 0.8000 1.0000 2.0000 0.0000 Constraint 117 274 0.8000 1.0000 2.0000 0.0000 Constraint 117 263 0.8000 1.0000 2.0000 0.0000 Constraint 117 255 0.8000 1.0000 2.0000 0.0000 Constraint 117 243 0.8000 1.0000 2.0000 0.0000 Constraint 117 197 0.8000 1.0000 2.0000 0.0000 Constraint 117 189 0.8000 1.0000 2.0000 0.0000 Constraint 117 183 0.8000 1.0000 2.0000 0.0000 Constraint 117 173 0.8000 1.0000 2.0000 0.0000 Constraint 117 165 0.8000 1.0000 2.0000 0.0000 Constraint 117 157 0.8000 1.0000 2.0000 0.0000 Constraint 117 146 0.8000 1.0000 2.0000 0.0000 Constraint 117 130 0.8000 1.0000 2.0000 0.0000 Constraint 110 691 0.8000 1.0000 2.0000 0.0000 Constraint 110 680 0.8000 1.0000 2.0000 0.0000 Constraint 110 673 0.8000 1.0000 2.0000 0.0000 Constraint 110 667 0.8000 1.0000 2.0000 0.0000 Constraint 110 660 0.8000 1.0000 2.0000 0.0000 Constraint 110 649 0.8000 1.0000 2.0000 0.0000 Constraint 110 642 0.8000 1.0000 2.0000 0.0000 Constraint 110 634 0.8000 1.0000 2.0000 0.0000 Constraint 110 626 0.8000 1.0000 2.0000 0.0000 Constraint 110 615 0.8000 1.0000 2.0000 0.0000 Constraint 110 545 0.8000 1.0000 2.0000 0.0000 Constraint 110 540 0.8000 1.0000 2.0000 0.0000 Constraint 110 533 0.8000 1.0000 2.0000 0.0000 Constraint 110 470 0.8000 1.0000 2.0000 0.0000 Constraint 110 455 0.8000 1.0000 2.0000 0.0000 Constraint 110 446 0.8000 1.0000 2.0000 0.0000 Constraint 110 434 0.8000 1.0000 2.0000 0.0000 Constraint 110 427 0.8000 1.0000 2.0000 0.0000 Constraint 110 418 0.8000 1.0000 2.0000 0.0000 Constraint 110 410 0.8000 1.0000 2.0000 0.0000 Constraint 110 402 0.8000 1.0000 2.0000 0.0000 Constraint 110 383 0.8000 1.0000 2.0000 0.0000 Constraint 110 374 0.8000 1.0000 2.0000 0.0000 Constraint 110 369 0.8000 1.0000 2.0000 0.0000 Constraint 110 358 0.8000 1.0000 2.0000 0.0000 Constraint 110 350 0.8000 1.0000 2.0000 0.0000 Constraint 110 324 0.8000 1.0000 2.0000 0.0000 Constraint 110 319 0.8000 1.0000 2.0000 0.0000 Constraint 110 295 0.8000 1.0000 2.0000 0.0000 Constraint 110 280 0.8000 1.0000 2.0000 0.0000 Constraint 110 274 0.8000 1.0000 2.0000 0.0000 Constraint 110 263 0.8000 1.0000 2.0000 0.0000 Constraint 110 255 0.8000 1.0000 2.0000 0.0000 Constraint 110 212 0.8000 1.0000 2.0000 0.0000 Constraint 110 206 0.8000 1.0000 2.0000 0.0000 Constraint 110 197 0.8000 1.0000 2.0000 0.0000 Constraint 110 189 0.8000 1.0000 2.0000 0.0000 Constraint 110 183 0.8000 1.0000 2.0000 0.0000 Constraint 110 173 0.8000 1.0000 2.0000 0.0000 Constraint 110 165 0.8000 1.0000 2.0000 0.0000 Constraint 110 157 0.8000 1.0000 2.0000 0.0000 Constraint 110 146 0.8000 1.0000 2.0000 0.0000 Constraint 110 130 0.8000 1.0000 2.0000 0.0000 Constraint 110 117 0.8000 1.0000 2.0000 0.0000 Constraint 97 691 0.8000 1.0000 2.0000 0.0000 Constraint 97 680 0.8000 1.0000 2.0000 0.0000 Constraint 97 673 0.8000 1.0000 2.0000 0.0000 Constraint 97 667 0.8000 1.0000 2.0000 0.0000 Constraint 97 660 0.8000 1.0000 2.0000 0.0000 Constraint 97 649 0.8000 1.0000 2.0000 0.0000 Constraint 97 642 0.8000 1.0000 2.0000 0.0000 Constraint 97 634 0.8000 1.0000 2.0000 0.0000 Constraint 97 568 0.8000 1.0000 2.0000 0.0000 Constraint 97 545 0.8000 1.0000 2.0000 0.0000 Constraint 97 540 0.8000 1.0000 2.0000 0.0000 Constraint 97 517 0.8000 1.0000 2.0000 0.0000 Constraint 97 512 0.8000 1.0000 2.0000 0.0000 Constraint 97 491 0.8000 1.0000 2.0000 0.0000 Constraint 97 483 0.8000 1.0000 2.0000 0.0000 Constraint 97 470 0.8000 1.0000 2.0000 0.0000 Constraint 97 463 0.8000 1.0000 2.0000 0.0000 Constraint 97 455 0.8000 1.0000 2.0000 0.0000 Constraint 97 446 0.8000 1.0000 2.0000 0.0000 Constraint 97 427 0.8000 1.0000 2.0000 0.0000 Constraint 97 418 0.8000 1.0000 2.0000 0.0000 Constraint 97 410 0.8000 1.0000 2.0000 0.0000 Constraint 97 391 0.8000 1.0000 2.0000 0.0000 Constraint 97 383 0.8000 1.0000 2.0000 0.0000 Constraint 97 374 0.8000 1.0000 2.0000 0.0000 Constraint 97 369 0.8000 1.0000 2.0000 0.0000 Constraint 97 358 0.8000 1.0000 2.0000 0.0000 Constraint 97 324 0.8000 1.0000 2.0000 0.0000 Constraint 97 287 0.8000 1.0000 2.0000 0.0000 Constraint 97 280 0.8000 1.0000 2.0000 0.0000 Constraint 97 274 0.8000 1.0000 2.0000 0.0000 Constraint 97 223 0.8000 1.0000 2.0000 0.0000 Constraint 97 212 0.8000 1.0000 2.0000 0.0000 Constraint 97 206 0.8000 1.0000 2.0000 0.0000 Constraint 97 197 0.8000 1.0000 2.0000 0.0000 Constraint 97 189 0.8000 1.0000 2.0000 0.0000 Constraint 97 183 0.8000 1.0000 2.0000 0.0000 Constraint 97 173 0.8000 1.0000 2.0000 0.0000 Constraint 97 165 0.8000 1.0000 2.0000 0.0000 Constraint 97 157 0.8000 1.0000 2.0000 0.0000 Constraint 97 146 0.8000 1.0000 2.0000 0.0000 Constraint 97 130 0.8000 1.0000 2.0000 0.0000 Constraint 97 117 0.8000 1.0000 2.0000 0.0000 Constraint 97 110 0.8000 1.0000 2.0000 0.0000 Constraint 86 691 0.8000 1.0000 2.0000 0.0000 Constraint 86 680 0.8000 1.0000 2.0000 0.0000 Constraint 86 673 0.8000 1.0000 2.0000 0.0000 Constraint 86 667 0.8000 1.0000 2.0000 0.0000 Constraint 86 660 0.8000 1.0000 2.0000 0.0000 Constraint 86 649 0.8000 1.0000 2.0000 0.0000 Constraint 86 568 0.8000 1.0000 2.0000 0.0000 Constraint 86 559 0.8000 1.0000 2.0000 0.0000 Constraint 86 545 0.8000 1.0000 2.0000 0.0000 Constraint 86 540 0.8000 1.0000 2.0000 0.0000 Constraint 86 517 0.8000 1.0000 2.0000 0.0000 Constraint 86 512 0.8000 1.0000 2.0000 0.0000 Constraint 86 491 0.8000 1.0000 2.0000 0.0000 Constraint 86 483 0.8000 1.0000 2.0000 0.0000 Constraint 86 470 0.8000 1.0000 2.0000 0.0000 Constraint 86 463 0.8000 1.0000 2.0000 0.0000 Constraint 86 455 0.8000 1.0000 2.0000 0.0000 Constraint 86 446 0.8000 1.0000 2.0000 0.0000 Constraint 86 427 0.8000 1.0000 2.0000 0.0000 Constraint 86 418 0.8000 1.0000 2.0000 0.0000 Constraint 86 410 0.8000 1.0000 2.0000 0.0000 Constraint 86 391 0.8000 1.0000 2.0000 0.0000 Constraint 86 374 0.8000 1.0000 2.0000 0.0000 Constraint 86 369 0.8000 1.0000 2.0000 0.0000 Constraint 86 358 0.8000 1.0000 2.0000 0.0000 Constraint 86 295 0.8000 1.0000 2.0000 0.0000 Constraint 86 287 0.8000 1.0000 2.0000 0.0000 Constraint 86 223 0.8000 1.0000 2.0000 0.0000 Constraint 86 212 0.8000 1.0000 2.0000 0.0000 Constraint 86 206 0.8000 1.0000 2.0000 0.0000 Constraint 86 197 0.8000 1.0000 2.0000 0.0000 Constraint 86 189 0.8000 1.0000 2.0000 0.0000 Constraint 86 183 0.8000 1.0000 2.0000 0.0000 Constraint 86 173 0.8000 1.0000 2.0000 0.0000 Constraint 86 157 0.8000 1.0000 2.0000 0.0000 Constraint 86 146 0.8000 1.0000 2.0000 0.0000 Constraint 86 130 0.8000 1.0000 2.0000 0.0000 Constraint 86 117 0.8000 1.0000 2.0000 0.0000 Constraint 86 110 0.8000 1.0000 2.0000 0.0000 Constraint 86 97 0.8000 1.0000 2.0000 0.0000 Constraint 78 691 0.8000 1.0000 2.0000 0.0000 Constraint 78 680 0.8000 1.0000 2.0000 0.0000 Constraint 78 673 0.8000 1.0000 2.0000 0.0000 Constraint 78 667 0.8000 1.0000 2.0000 0.0000 Constraint 78 660 0.8000 1.0000 2.0000 0.0000 Constraint 78 649 0.8000 1.0000 2.0000 0.0000 Constraint 78 568 0.8000 1.0000 2.0000 0.0000 Constraint 78 545 0.8000 1.0000 2.0000 0.0000 Constraint 78 540 0.8000 1.0000 2.0000 0.0000 Constraint 78 533 0.8000 1.0000 2.0000 0.0000 Constraint 78 526 0.8000 1.0000 2.0000 0.0000 Constraint 78 517 0.8000 1.0000 2.0000 0.0000 Constraint 78 502 0.8000 1.0000 2.0000 0.0000 Constraint 78 491 0.8000 1.0000 2.0000 0.0000 Constraint 78 483 0.8000 1.0000 2.0000 0.0000 Constraint 78 470 0.8000 1.0000 2.0000 0.0000 Constraint 78 463 0.8000 1.0000 2.0000 0.0000 Constraint 78 455 0.8000 1.0000 2.0000 0.0000 Constraint 78 446 0.8000 1.0000 2.0000 0.0000 Constraint 78 418 0.8000 1.0000 2.0000 0.0000 Constraint 78 410 0.8000 1.0000 2.0000 0.0000 Constraint 78 402 0.8000 1.0000 2.0000 0.0000 Constraint 78 391 0.8000 1.0000 2.0000 0.0000 Constraint 78 383 0.8000 1.0000 2.0000 0.0000 Constraint 78 374 0.8000 1.0000 2.0000 0.0000 Constraint 78 369 0.8000 1.0000 2.0000 0.0000 Constraint 78 358 0.8000 1.0000 2.0000 0.0000 Constraint 78 324 0.8000 1.0000 2.0000 0.0000 Constraint 78 295 0.8000 1.0000 2.0000 0.0000 Constraint 78 243 0.8000 1.0000 2.0000 0.0000 Constraint 78 234 0.8000 1.0000 2.0000 0.0000 Constraint 78 223 0.8000 1.0000 2.0000 0.0000 Constraint 78 212 0.8000 1.0000 2.0000 0.0000 Constraint 78 206 0.8000 1.0000 2.0000 0.0000 Constraint 78 197 0.8000 1.0000 2.0000 0.0000 Constraint 78 189 0.8000 1.0000 2.0000 0.0000 Constraint 78 183 0.8000 1.0000 2.0000 0.0000 Constraint 78 173 0.8000 1.0000 2.0000 0.0000 Constraint 78 157 0.8000 1.0000 2.0000 0.0000 Constraint 78 130 0.8000 1.0000 2.0000 0.0000 Constraint 78 117 0.8000 1.0000 2.0000 0.0000 Constraint 78 110 0.8000 1.0000 2.0000 0.0000 Constraint 78 97 0.8000 1.0000 2.0000 0.0000 Constraint 78 86 0.8000 1.0000 2.0000 0.0000 Constraint 68 691 0.8000 1.0000 2.0000 0.0000 Constraint 68 680 0.8000 1.0000 2.0000 0.0000 Constraint 68 673 0.8000 1.0000 2.0000 0.0000 Constraint 68 667 0.8000 1.0000 2.0000 0.0000 Constraint 68 660 0.8000 1.0000 2.0000 0.0000 Constraint 68 584 0.8000 1.0000 2.0000 0.0000 Constraint 68 573 0.8000 1.0000 2.0000 0.0000 Constraint 68 568 0.8000 1.0000 2.0000 0.0000 Constraint 68 551 0.8000 1.0000 2.0000 0.0000 Constraint 68 545 0.8000 1.0000 2.0000 0.0000 Constraint 68 533 0.8000 1.0000 2.0000 0.0000 Constraint 68 526 0.8000 1.0000 2.0000 0.0000 Constraint 68 517 0.8000 1.0000 2.0000 0.0000 Constraint 68 512 0.8000 1.0000 2.0000 0.0000 Constraint 68 502 0.8000 1.0000 2.0000 0.0000 Constraint 68 491 0.8000 1.0000 2.0000 0.0000 Constraint 68 483 0.8000 1.0000 2.0000 0.0000 Constraint 68 470 0.8000 1.0000 2.0000 0.0000 Constraint 68 463 0.8000 1.0000 2.0000 0.0000 Constraint 68 455 0.8000 1.0000 2.0000 0.0000 Constraint 68 446 0.8000 1.0000 2.0000 0.0000 Constraint 68 418 0.8000 1.0000 2.0000 0.0000 Constraint 68 410 0.8000 1.0000 2.0000 0.0000 Constraint 68 402 0.8000 1.0000 2.0000 0.0000 Constraint 68 391 0.8000 1.0000 2.0000 0.0000 Constraint 68 374 0.8000 1.0000 2.0000 0.0000 Constraint 68 369 0.8000 1.0000 2.0000 0.0000 Constraint 68 358 0.8000 1.0000 2.0000 0.0000 Constraint 68 295 0.8000 1.0000 2.0000 0.0000 Constraint 68 243 0.8000 1.0000 2.0000 0.0000 Constraint 68 234 0.8000 1.0000 2.0000 0.0000 Constraint 68 223 0.8000 1.0000 2.0000 0.0000 Constraint 68 212 0.8000 1.0000 2.0000 0.0000 Constraint 68 206 0.8000 1.0000 2.0000 0.0000 Constraint 68 197 0.8000 1.0000 2.0000 0.0000 Constraint 68 189 0.8000 1.0000 2.0000 0.0000 Constraint 68 183 0.8000 1.0000 2.0000 0.0000 Constraint 68 173 0.8000 1.0000 2.0000 0.0000 Constraint 68 165 0.8000 1.0000 2.0000 0.0000 Constraint 68 157 0.8000 1.0000 2.0000 0.0000 Constraint 68 146 0.8000 1.0000 2.0000 0.0000 Constraint 68 130 0.8000 1.0000 2.0000 0.0000 Constraint 68 117 0.8000 1.0000 2.0000 0.0000 Constraint 68 110 0.8000 1.0000 2.0000 0.0000 Constraint 68 97 0.8000 1.0000 2.0000 0.0000 Constraint 68 86 0.8000 1.0000 2.0000 0.0000 Constraint 68 78 0.8000 1.0000 2.0000 0.0000 Constraint 62 691 0.8000 1.0000 2.0000 0.0000 Constraint 62 680 0.8000 1.0000 2.0000 0.0000 Constraint 62 673 0.8000 1.0000 2.0000 0.0000 Constraint 62 667 0.8000 1.0000 2.0000 0.0000 Constraint 62 660 0.8000 1.0000 2.0000 0.0000 Constraint 62 593 0.8000 1.0000 2.0000 0.0000 Constraint 62 584 0.8000 1.0000 2.0000 0.0000 Constraint 62 568 0.8000 1.0000 2.0000 0.0000 Constraint 62 559 0.8000 1.0000 2.0000 0.0000 Constraint 62 545 0.8000 1.0000 2.0000 0.0000 Constraint 62 540 0.8000 1.0000 2.0000 0.0000 Constraint 62 533 0.8000 1.0000 2.0000 0.0000 Constraint 62 526 0.8000 1.0000 2.0000 0.0000 Constraint 62 517 0.8000 1.0000 2.0000 0.0000 Constraint 62 512 0.8000 1.0000 2.0000 0.0000 Constraint 62 502 0.8000 1.0000 2.0000 0.0000 Constraint 62 491 0.8000 1.0000 2.0000 0.0000 Constraint 62 483 0.8000 1.0000 2.0000 0.0000 Constraint 62 470 0.8000 1.0000 2.0000 0.0000 Constraint 62 463 0.8000 1.0000 2.0000 0.0000 Constraint 62 455 0.8000 1.0000 2.0000 0.0000 Constraint 62 446 0.8000 1.0000 2.0000 0.0000 Constraint 62 434 0.8000 1.0000 2.0000 0.0000 Constraint 62 391 0.8000 1.0000 2.0000 0.0000 Constraint 62 374 0.8000 1.0000 2.0000 0.0000 Constraint 62 369 0.8000 1.0000 2.0000 0.0000 Constraint 62 358 0.8000 1.0000 2.0000 0.0000 Constraint 62 295 0.8000 1.0000 2.0000 0.0000 Constraint 62 274 0.8000 1.0000 2.0000 0.0000 Constraint 62 263 0.8000 1.0000 2.0000 0.0000 Constraint 62 255 0.8000 1.0000 2.0000 0.0000 Constraint 62 243 0.8000 1.0000 2.0000 0.0000 Constraint 62 234 0.8000 1.0000 2.0000 0.0000 Constraint 62 223 0.8000 1.0000 2.0000 0.0000 Constraint 62 212 0.8000 1.0000 2.0000 0.0000 Constraint 62 206 0.8000 1.0000 2.0000 0.0000 Constraint 62 197 0.8000 1.0000 2.0000 0.0000 Constraint 62 189 0.8000 1.0000 2.0000 0.0000 Constraint 62 183 0.8000 1.0000 2.0000 0.0000 Constraint 62 173 0.8000 1.0000 2.0000 0.0000 Constraint 62 165 0.8000 1.0000 2.0000 0.0000 Constraint 62 157 0.8000 1.0000 2.0000 0.0000 Constraint 62 146 0.8000 1.0000 2.0000 0.0000 Constraint 62 117 0.8000 1.0000 2.0000 0.0000 Constraint 62 110 0.8000 1.0000 2.0000 0.0000 Constraint 62 97 0.8000 1.0000 2.0000 0.0000 Constraint 62 86 0.8000 1.0000 2.0000 0.0000 Constraint 62 78 0.8000 1.0000 2.0000 0.0000 Constraint 62 68 0.8000 1.0000 2.0000 0.0000 Constraint 54 691 0.8000 1.0000 2.0000 0.0000 Constraint 54 680 0.8000 1.0000 2.0000 0.0000 Constraint 54 673 0.8000 1.0000 2.0000 0.0000 Constraint 54 667 0.8000 1.0000 2.0000 0.0000 Constraint 54 660 0.8000 1.0000 2.0000 0.0000 Constraint 54 593 0.8000 1.0000 2.0000 0.0000 Constraint 54 573 0.8000 1.0000 2.0000 0.0000 Constraint 54 568 0.8000 1.0000 2.0000 0.0000 Constraint 54 559 0.8000 1.0000 2.0000 0.0000 Constraint 54 545 0.8000 1.0000 2.0000 0.0000 Constraint 54 540 0.8000 1.0000 2.0000 0.0000 Constraint 54 533 0.8000 1.0000 2.0000 0.0000 Constraint 54 526 0.8000 1.0000 2.0000 0.0000 Constraint 54 517 0.8000 1.0000 2.0000 0.0000 Constraint 54 512 0.8000 1.0000 2.0000 0.0000 Constraint 54 502 0.8000 1.0000 2.0000 0.0000 Constraint 54 491 0.8000 1.0000 2.0000 0.0000 Constraint 54 483 0.8000 1.0000 2.0000 0.0000 Constraint 54 470 0.8000 1.0000 2.0000 0.0000 Constraint 54 463 0.8000 1.0000 2.0000 0.0000 Constraint 54 455 0.8000 1.0000 2.0000 0.0000 Constraint 54 446 0.8000 1.0000 2.0000 0.0000 Constraint 54 434 0.8000 1.0000 2.0000 0.0000 Constraint 54 427 0.8000 1.0000 2.0000 0.0000 Constraint 54 402 0.8000 1.0000 2.0000 0.0000 Constraint 54 391 0.8000 1.0000 2.0000 0.0000 Constraint 54 374 0.8000 1.0000 2.0000 0.0000 Constraint 54 369 0.8000 1.0000 2.0000 0.0000 Constraint 54 358 0.8000 1.0000 2.0000 0.0000 Constraint 54 329 0.8000 1.0000 2.0000 0.0000 Constraint 54 324 0.8000 1.0000 2.0000 0.0000 Constraint 54 295 0.8000 1.0000 2.0000 0.0000 Constraint 54 287 0.8000 1.0000 2.0000 0.0000 Constraint 54 280 0.8000 1.0000 2.0000 0.0000 Constraint 54 274 0.8000 1.0000 2.0000 0.0000 Constraint 54 263 0.8000 1.0000 2.0000 0.0000 Constraint 54 255 0.8000 1.0000 2.0000 0.0000 Constraint 54 243 0.8000 1.0000 2.0000 0.0000 Constraint 54 234 0.8000 1.0000 2.0000 0.0000 Constraint 54 223 0.8000 1.0000 2.0000 0.0000 Constraint 54 212 0.8000 1.0000 2.0000 0.0000 Constraint 54 206 0.8000 1.0000 2.0000 0.0000 Constraint 54 197 0.8000 1.0000 2.0000 0.0000 Constraint 54 189 0.8000 1.0000 2.0000 0.0000 Constraint 54 183 0.8000 1.0000 2.0000 0.0000 Constraint 54 173 0.8000 1.0000 2.0000 0.0000 Constraint 54 165 0.8000 1.0000 2.0000 0.0000 Constraint 54 157 0.8000 1.0000 2.0000 0.0000 Constraint 54 146 0.8000 1.0000 2.0000 0.0000 Constraint 54 130 0.8000 1.0000 2.0000 0.0000 Constraint 54 117 0.8000 1.0000 2.0000 0.0000 Constraint 54 110 0.8000 1.0000 2.0000 0.0000 Constraint 54 97 0.8000 1.0000 2.0000 0.0000 Constraint 54 86 0.8000 1.0000 2.0000 0.0000 Constraint 54 78 0.8000 1.0000 2.0000 0.0000 Constraint 54 68 0.8000 1.0000 2.0000 0.0000 Constraint 54 62 0.8000 1.0000 2.0000 0.0000 Constraint 43 680 0.8000 1.0000 2.0000 0.0000 Constraint 43 673 0.8000 1.0000 2.0000 0.0000 Constraint 43 667 0.8000 1.0000 2.0000 0.0000 Constraint 43 601 0.8000 1.0000 2.0000 0.0000 Constraint 43 593 0.8000 1.0000 2.0000 0.0000 Constraint 43 584 0.8000 1.0000 2.0000 0.0000 Constraint 43 573 0.8000 1.0000 2.0000 0.0000 Constraint 43 568 0.8000 1.0000 2.0000 0.0000 Constraint 43 559 0.8000 1.0000 2.0000 0.0000 Constraint 43 551 0.8000 1.0000 2.0000 0.0000 Constraint 43 545 0.8000 1.0000 2.0000 0.0000 Constraint 43 533 0.8000 1.0000 2.0000 0.0000 Constraint 43 526 0.8000 1.0000 2.0000 0.0000 Constraint 43 517 0.8000 1.0000 2.0000 0.0000 Constraint 43 502 0.8000 1.0000 2.0000 0.0000 Constraint 43 491 0.8000 1.0000 2.0000 0.0000 Constraint 43 483 0.8000 1.0000 2.0000 0.0000 Constraint 43 470 0.8000 1.0000 2.0000 0.0000 Constraint 43 463 0.8000 1.0000 2.0000 0.0000 Constraint 43 455 0.8000 1.0000 2.0000 0.0000 Constraint 43 446 0.8000 1.0000 2.0000 0.0000 Constraint 43 434 0.8000 1.0000 2.0000 0.0000 Constraint 43 427 0.8000 1.0000 2.0000 0.0000 Constraint 43 402 0.8000 1.0000 2.0000 0.0000 Constraint 43 391 0.8000 1.0000 2.0000 0.0000 Constraint 43 374 0.8000 1.0000 2.0000 0.0000 Constraint 43 369 0.8000 1.0000 2.0000 0.0000 Constraint 43 329 0.8000 1.0000 2.0000 0.0000 Constraint 43 324 0.8000 1.0000 2.0000 0.0000 Constraint 43 319 0.8000 1.0000 2.0000 0.0000 Constraint 43 312 0.8000 1.0000 2.0000 0.0000 Constraint 43 306 0.8000 1.0000 2.0000 0.0000 Constraint 43 295 0.8000 1.0000 2.0000 0.0000 Constraint 43 287 0.8000 1.0000 2.0000 0.0000 Constraint 43 280 0.8000 1.0000 2.0000 0.0000 Constraint 43 274 0.8000 1.0000 2.0000 0.0000 Constraint 43 263 0.8000 1.0000 2.0000 0.0000 Constraint 43 255 0.8000 1.0000 2.0000 0.0000 Constraint 43 243 0.8000 1.0000 2.0000 0.0000 Constraint 43 234 0.8000 1.0000 2.0000 0.0000 Constraint 43 223 0.8000 1.0000 2.0000 0.0000 Constraint 43 212 0.8000 1.0000 2.0000 0.0000 Constraint 43 206 0.8000 1.0000 2.0000 0.0000 Constraint 43 197 0.8000 1.0000 2.0000 0.0000 Constraint 43 189 0.8000 1.0000 2.0000 0.0000 Constraint 43 183 0.8000 1.0000 2.0000 0.0000 Constraint 43 173 0.8000 1.0000 2.0000 0.0000 Constraint 43 165 0.8000 1.0000 2.0000 0.0000 Constraint 43 157 0.8000 1.0000 2.0000 0.0000 Constraint 43 146 0.8000 1.0000 2.0000 0.0000 Constraint 43 130 0.8000 1.0000 2.0000 0.0000 Constraint 43 117 0.8000 1.0000 2.0000 0.0000 Constraint 43 110 0.8000 1.0000 2.0000 0.0000 Constraint 43 97 0.8000 1.0000 2.0000 0.0000 Constraint 43 86 0.8000 1.0000 2.0000 0.0000 Constraint 43 78 0.8000 1.0000 2.0000 0.0000 Constraint 43 68 0.8000 1.0000 2.0000 0.0000 Constraint 43 62 0.8000 1.0000 2.0000 0.0000 Constraint 43 54 0.8000 1.0000 2.0000 0.0000 Constraint 36 691 0.8000 1.0000 2.0000 0.0000 Constraint 36 610 0.8000 1.0000 2.0000 0.0000 Constraint 36 601 0.8000 1.0000 2.0000 0.0000 Constraint 36 593 0.8000 1.0000 2.0000 0.0000 Constraint 36 584 0.8000 1.0000 2.0000 0.0000 Constraint 36 573 0.8000 1.0000 2.0000 0.0000 Constraint 36 568 0.8000 1.0000 2.0000 0.0000 Constraint 36 559 0.8000 1.0000 2.0000 0.0000 Constraint 36 551 0.8000 1.0000 2.0000 0.0000 Constraint 36 545 0.8000 1.0000 2.0000 0.0000 Constraint 36 533 0.8000 1.0000 2.0000 0.0000 Constraint 36 526 0.8000 1.0000 2.0000 0.0000 Constraint 36 517 0.8000 1.0000 2.0000 0.0000 Constraint 36 502 0.8000 1.0000 2.0000 0.0000 Constraint 36 491 0.8000 1.0000 2.0000 0.0000 Constraint 36 483 0.8000 1.0000 2.0000 0.0000 Constraint 36 470 0.8000 1.0000 2.0000 0.0000 Constraint 36 463 0.8000 1.0000 2.0000 0.0000 Constraint 36 455 0.8000 1.0000 2.0000 0.0000 Constraint 36 446 0.8000 1.0000 2.0000 0.0000 Constraint 36 434 0.8000 1.0000 2.0000 0.0000 Constraint 36 427 0.8000 1.0000 2.0000 0.0000 Constraint 36 402 0.8000 1.0000 2.0000 0.0000 Constraint 36 383 0.8000 1.0000 2.0000 0.0000 Constraint 36 374 0.8000 1.0000 2.0000 0.0000 Constraint 36 369 0.8000 1.0000 2.0000 0.0000 Constraint 36 358 0.8000 1.0000 2.0000 0.0000 Constraint 36 350 0.8000 1.0000 2.0000 0.0000 Constraint 36 340 0.8000 1.0000 2.0000 0.0000 Constraint 36 329 0.8000 1.0000 2.0000 0.0000 Constraint 36 324 0.8000 1.0000 2.0000 0.0000 Constraint 36 319 0.8000 1.0000 2.0000 0.0000 Constraint 36 312 0.8000 1.0000 2.0000 0.0000 Constraint 36 306 0.8000 1.0000 2.0000 0.0000 Constraint 36 295 0.8000 1.0000 2.0000 0.0000 Constraint 36 287 0.8000 1.0000 2.0000 0.0000 Constraint 36 280 0.8000 1.0000 2.0000 0.0000 Constraint 36 274 0.8000 1.0000 2.0000 0.0000 Constraint 36 263 0.8000 1.0000 2.0000 0.0000 Constraint 36 255 0.8000 1.0000 2.0000 0.0000 Constraint 36 243 0.8000 1.0000 2.0000 0.0000 Constraint 36 234 0.8000 1.0000 2.0000 0.0000 Constraint 36 223 0.8000 1.0000 2.0000 0.0000 Constraint 36 212 0.8000 1.0000 2.0000 0.0000 Constraint 36 206 0.8000 1.0000 2.0000 0.0000 Constraint 36 197 0.8000 1.0000 2.0000 0.0000 Constraint 36 189 0.8000 1.0000 2.0000 0.0000 Constraint 36 183 0.8000 1.0000 2.0000 0.0000 Constraint 36 173 0.8000 1.0000 2.0000 0.0000 Constraint 36 165 0.8000 1.0000 2.0000 0.0000 Constraint 36 157 0.8000 1.0000 2.0000 0.0000 Constraint 36 146 0.8000 1.0000 2.0000 0.0000 Constraint 36 130 0.8000 1.0000 2.0000 0.0000 Constraint 36 117 0.8000 1.0000 2.0000 0.0000 Constraint 36 97 0.8000 1.0000 2.0000 0.0000 Constraint 36 86 0.8000 1.0000 2.0000 0.0000 Constraint 36 78 0.8000 1.0000 2.0000 0.0000 Constraint 36 68 0.8000 1.0000 2.0000 0.0000 Constraint 36 62 0.8000 1.0000 2.0000 0.0000 Constraint 36 54 0.8000 1.0000 2.0000 0.0000 Constraint 36 43 0.8000 1.0000 2.0000 0.0000 Constraint 25 626 0.8000 1.0000 2.0000 0.0000 Constraint 25 615 0.8000 1.0000 2.0000 0.0000 Constraint 25 610 0.8000 1.0000 2.0000 0.0000 Constraint 25 601 0.8000 1.0000 2.0000 0.0000 Constraint 25 593 0.8000 1.0000 2.0000 0.0000 Constraint 25 584 0.8000 1.0000 2.0000 0.0000 Constraint 25 573 0.8000 1.0000 2.0000 0.0000 Constraint 25 568 0.8000 1.0000 2.0000 0.0000 Constraint 25 559 0.8000 1.0000 2.0000 0.0000 Constraint 25 551 0.8000 1.0000 2.0000 0.0000 Constraint 25 545 0.8000 1.0000 2.0000 0.0000 Constraint 25 533 0.8000 1.0000 2.0000 0.0000 Constraint 25 526 0.8000 1.0000 2.0000 0.0000 Constraint 25 517 0.8000 1.0000 2.0000 0.0000 Constraint 25 512 0.8000 1.0000 2.0000 0.0000 Constraint 25 502 0.8000 1.0000 2.0000 0.0000 Constraint 25 491 0.8000 1.0000 2.0000 0.0000 Constraint 25 483 0.8000 1.0000 2.0000 0.0000 Constraint 25 470 0.8000 1.0000 2.0000 0.0000 Constraint 25 463 0.8000 1.0000 2.0000 0.0000 Constraint 25 455 0.8000 1.0000 2.0000 0.0000 Constraint 25 446 0.8000 1.0000 2.0000 0.0000 Constraint 25 434 0.8000 1.0000 2.0000 0.0000 Constraint 25 427 0.8000 1.0000 2.0000 0.0000 Constraint 25 418 0.8000 1.0000 2.0000 0.0000 Constraint 25 402 0.8000 1.0000 2.0000 0.0000 Constraint 25 391 0.8000 1.0000 2.0000 0.0000 Constraint 25 374 0.8000 1.0000 2.0000 0.0000 Constraint 25 369 0.8000 1.0000 2.0000 0.0000 Constraint 25 358 0.8000 1.0000 2.0000 0.0000 Constraint 25 350 0.8000 1.0000 2.0000 0.0000 Constraint 25 340 0.8000 1.0000 2.0000 0.0000 Constraint 25 329 0.8000 1.0000 2.0000 0.0000 Constraint 25 324 0.8000 1.0000 2.0000 0.0000 Constraint 25 319 0.8000 1.0000 2.0000 0.0000 Constraint 25 312 0.8000 1.0000 2.0000 0.0000 Constraint 25 306 0.8000 1.0000 2.0000 0.0000 Constraint 25 295 0.8000 1.0000 2.0000 0.0000 Constraint 25 287 0.8000 1.0000 2.0000 0.0000 Constraint 25 280 0.8000 1.0000 2.0000 0.0000 Constraint 25 274 0.8000 1.0000 2.0000 0.0000 Constraint 25 263 0.8000 1.0000 2.0000 0.0000 Constraint 25 255 0.8000 1.0000 2.0000 0.0000 Constraint 25 243 0.8000 1.0000 2.0000 0.0000 Constraint 25 234 0.8000 1.0000 2.0000 0.0000 Constraint 25 223 0.8000 1.0000 2.0000 0.0000 Constraint 25 212 0.8000 1.0000 2.0000 0.0000 Constraint 25 206 0.8000 1.0000 2.0000 0.0000 Constraint 25 197 0.8000 1.0000 2.0000 0.0000 Constraint 25 189 0.8000 1.0000 2.0000 0.0000 Constraint 25 183 0.8000 1.0000 2.0000 0.0000 Constraint 25 173 0.8000 1.0000 2.0000 0.0000 Constraint 25 165 0.8000 1.0000 2.0000 0.0000 Constraint 25 157 0.8000 1.0000 2.0000 0.0000 Constraint 25 146 0.8000 1.0000 2.0000 0.0000 Constraint 25 130 0.8000 1.0000 2.0000 0.0000 Constraint 25 117 0.8000 1.0000 2.0000 0.0000 Constraint 25 110 0.8000 1.0000 2.0000 0.0000 Constraint 25 97 0.8000 1.0000 2.0000 0.0000 Constraint 25 86 0.8000 1.0000 2.0000 0.0000 Constraint 25 78 0.8000 1.0000 2.0000 0.0000 Constraint 25 68 0.8000 1.0000 2.0000 0.0000 Constraint 25 62 0.8000 1.0000 2.0000 0.0000 Constraint 25 54 0.8000 1.0000 2.0000 0.0000 Constraint 25 43 0.8000 1.0000 2.0000 0.0000 Constraint 25 36 0.8000 1.0000 2.0000 0.0000 Constraint 17 691 0.8000 1.0000 2.0000 0.0000 Constraint 17 626 0.8000 1.0000 2.0000 0.0000 Constraint 17 615 0.8000 1.0000 2.0000 0.0000 Constraint 17 610 0.8000 1.0000 2.0000 0.0000 Constraint 17 601 0.8000 1.0000 2.0000 0.0000 Constraint 17 593 0.8000 1.0000 2.0000 0.0000 Constraint 17 584 0.8000 1.0000 2.0000 0.0000 Constraint 17 573 0.8000 1.0000 2.0000 0.0000 Constraint 17 568 0.8000 1.0000 2.0000 0.0000 Constraint 17 559 0.8000 1.0000 2.0000 0.0000 Constraint 17 551 0.8000 1.0000 2.0000 0.0000 Constraint 17 545 0.8000 1.0000 2.0000 0.0000 Constraint 17 540 0.8000 1.0000 2.0000 0.0000 Constraint 17 533 0.8000 1.0000 2.0000 0.0000 Constraint 17 526 0.8000 1.0000 2.0000 0.0000 Constraint 17 517 0.8000 1.0000 2.0000 0.0000 Constraint 17 512 0.8000 1.0000 2.0000 0.0000 Constraint 17 502 0.8000 1.0000 2.0000 0.0000 Constraint 17 491 0.8000 1.0000 2.0000 0.0000 Constraint 17 483 0.8000 1.0000 2.0000 0.0000 Constraint 17 470 0.8000 1.0000 2.0000 0.0000 Constraint 17 463 0.8000 1.0000 2.0000 0.0000 Constraint 17 455 0.8000 1.0000 2.0000 0.0000 Constraint 17 446 0.8000 1.0000 2.0000 0.0000 Constraint 17 434 0.8000 1.0000 2.0000 0.0000 Constraint 17 427 0.8000 1.0000 2.0000 0.0000 Constraint 17 418 0.8000 1.0000 2.0000 0.0000 Constraint 17 402 0.8000 1.0000 2.0000 0.0000 Constraint 17 383 0.8000 1.0000 2.0000 0.0000 Constraint 17 369 0.8000 1.0000 2.0000 0.0000 Constraint 17 358 0.8000 1.0000 2.0000 0.0000 Constraint 17 350 0.8000 1.0000 2.0000 0.0000 Constraint 17 340 0.8000 1.0000 2.0000 0.0000 Constraint 17 329 0.8000 1.0000 2.0000 0.0000 Constraint 17 324 0.8000 1.0000 2.0000 0.0000 Constraint 17 319 0.8000 1.0000 2.0000 0.0000 Constraint 17 312 0.8000 1.0000 2.0000 0.0000 Constraint 17 306 0.8000 1.0000 2.0000 0.0000 Constraint 17 295 0.8000 1.0000 2.0000 0.0000 Constraint 17 287 0.8000 1.0000 2.0000 0.0000 Constraint 17 280 0.8000 1.0000 2.0000 0.0000 Constraint 17 274 0.8000 1.0000 2.0000 0.0000 Constraint 17 263 0.8000 1.0000 2.0000 0.0000 Constraint 17 255 0.8000 1.0000 2.0000 0.0000 Constraint 17 243 0.8000 1.0000 2.0000 0.0000 Constraint 17 234 0.8000 1.0000 2.0000 0.0000 Constraint 17 223 0.8000 1.0000 2.0000 0.0000 Constraint 17 206 0.8000 1.0000 2.0000 0.0000 Constraint 17 197 0.8000 1.0000 2.0000 0.0000 Constraint 17 189 0.8000 1.0000 2.0000 0.0000 Constraint 17 183 0.8000 1.0000 2.0000 0.0000 Constraint 17 173 0.8000 1.0000 2.0000 0.0000 Constraint 17 165 0.8000 1.0000 2.0000 0.0000 Constraint 17 157 0.8000 1.0000 2.0000 0.0000 Constraint 17 146 0.8000 1.0000 2.0000 0.0000 Constraint 17 130 0.8000 1.0000 2.0000 0.0000 Constraint 17 117 0.8000 1.0000 2.0000 0.0000 Constraint 17 110 0.8000 1.0000 2.0000 0.0000 Constraint 17 97 0.8000 1.0000 2.0000 0.0000 Constraint 17 86 0.8000 1.0000 2.0000 0.0000 Constraint 17 78 0.8000 1.0000 2.0000 0.0000 Constraint 17 68 0.8000 1.0000 2.0000 0.0000 Constraint 17 62 0.8000 1.0000 2.0000 0.0000 Constraint 17 54 0.8000 1.0000 2.0000 0.0000 Constraint 17 43 0.8000 1.0000 2.0000 0.0000 Constraint 17 36 0.8000 1.0000 2.0000 0.0000 Constraint 17 25 0.8000 1.0000 2.0000 0.0000 Constraint 9 642 0.8000 1.0000 2.0000 0.0000 Constraint 9 634 0.8000 1.0000 2.0000 0.0000 Constraint 9 626 0.8000 1.0000 2.0000 0.0000 Constraint 9 615 0.8000 1.0000 2.0000 0.0000 Constraint 9 610 0.8000 1.0000 2.0000 0.0000 Constraint 9 601 0.8000 1.0000 2.0000 0.0000 Constraint 9 593 0.8000 1.0000 2.0000 0.0000 Constraint 9 584 0.8000 1.0000 2.0000 0.0000 Constraint 9 573 0.8000 1.0000 2.0000 0.0000 Constraint 9 568 0.8000 1.0000 2.0000 0.0000 Constraint 9 559 0.8000 1.0000 2.0000 0.0000 Constraint 9 551 0.8000 1.0000 2.0000 0.0000 Constraint 9 545 0.8000 1.0000 2.0000 0.0000 Constraint 9 540 0.8000 1.0000 2.0000 0.0000 Constraint 9 533 0.8000 1.0000 2.0000 0.0000 Constraint 9 526 0.8000 1.0000 2.0000 0.0000 Constraint 9 517 0.8000 1.0000 2.0000 0.0000 Constraint 9 512 0.8000 1.0000 2.0000 0.0000 Constraint 9 502 0.8000 1.0000 2.0000 0.0000 Constraint 9 491 0.8000 1.0000 2.0000 0.0000 Constraint 9 483 0.8000 1.0000 2.0000 0.0000 Constraint 9 470 0.8000 1.0000 2.0000 0.0000 Constraint 9 463 0.8000 1.0000 2.0000 0.0000 Constraint 9 455 0.8000 1.0000 2.0000 0.0000 Constraint 9 446 0.8000 1.0000 2.0000 0.0000 Constraint 9 434 0.8000 1.0000 2.0000 0.0000 Constraint 9 427 0.8000 1.0000 2.0000 0.0000 Constraint 9 418 0.8000 1.0000 2.0000 0.0000 Constraint 9 410 0.8000 1.0000 2.0000 0.0000 Constraint 9 402 0.8000 1.0000 2.0000 0.0000 Constraint 9 391 0.8000 1.0000 2.0000 0.0000 Constraint 9 383 0.8000 1.0000 2.0000 0.0000 Constraint 9 374 0.8000 1.0000 2.0000 0.0000 Constraint 9 369 0.8000 1.0000 2.0000 0.0000 Constraint 9 358 0.8000 1.0000 2.0000 0.0000 Constraint 9 350 0.8000 1.0000 2.0000 0.0000 Constraint 9 340 0.8000 1.0000 2.0000 0.0000 Constraint 9 329 0.8000 1.0000 2.0000 0.0000 Constraint 9 324 0.8000 1.0000 2.0000 0.0000 Constraint 9 319 0.8000 1.0000 2.0000 0.0000 Constraint 9 312 0.8000 1.0000 2.0000 0.0000 Constraint 9 306 0.8000 1.0000 2.0000 0.0000 Constraint 9 295 0.8000 1.0000 2.0000 0.0000 Constraint 9 287 0.8000 1.0000 2.0000 0.0000 Constraint 9 280 0.8000 1.0000 2.0000 0.0000 Constraint 9 274 0.8000 1.0000 2.0000 0.0000 Constraint 9 263 0.8000 1.0000 2.0000 0.0000 Constraint 9 255 0.8000 1.0000 2.0000 0.0000 Constraint 9 243 0.8000 1.0000 2.0000 0.0000 Constraint 9 234 0.8000 1.0000 2.0000 0.0000 Constraint 9 223 0.8000 1.0000 2.0000 0.0000 Constraint 9 206 0.8000 1.0000 2.0000 0.0000 Constraint 9 197 0.8000 1.0000 2.0000 0.0000 Constraint 9 189 0.8000 1.0000 2.0000 0.0000 Constraint 9 183 0.8000 1.0000 2.0000 0.0000 Constraint 9 173 0.8000 1.0000 2.0000 0.0000 Constraint 9 165 0.8000 1.0000 2.0000 0.0000 Constraint 9 157 0.8000 1.0000 2.0000 0.0000 Constraint 9 146 0.8000 1.0000 2.0000 0.0000 Constraint 9 130 0.8000 1.0000 2.0000 0.0000 Constraint 9 117 0.8000 1.0000 2.0000 0.0000 Constraint 9 110 0.8000 1.0000 2.0000 0.0000 Constraint 9 97 0.8000 1.0000 2.0000 0.0000 Constraint 9 78 0.8000 1.0000 2.0000 0.0000 Constraint 9 68 0.8000 1.0000 2.0000 0.0000 Constraint 9 62 0.8000 1.0000 2.0000 0.0000 Constraint 9 54 0.8000 1.0000 2.0000 0.0000 Constraint 9 43 0.8000 1.0000 2.0000 0.0000 Constraint 9 36 0.8000 1.0000 2.0000 0.0000 Constraint 9 25 0.8000 1.0000 2.0000 0.0000 Constraint 9 17 0.8000 1.0000 2.0000 0.0000 Constraint 3 667 0.8000 1.0000 2.0000 0.0000 Constraint 3 649 0.8000 1.0000 2.0000 0.0000 Constraint 3 642 0.8000 1.0000 2.0000 0.0000 Constraint 3 634 0.8000 1.0000 2.0000 0.0000 Constraint 3 626 0.8000 1.0000 2.0000 0.0000 Constraint 3 615 0.8000 1.0000 2.0000 0.0000 Constraint 3 610 0.8000 1.0000 2.0000 0.0000 Constraint 3 601 0.8000 1.0000 2.0000 0.0000 Constraint 3 593 0.8000 1.0000 2.0000 0.0000 Constraint 3 584 0.8000 1.0000 2.0000 0.0000 Constraint 3 573 0.8000 1.0000 2.0000 0.0000 Constraint 3 568 0.8000 1.0000 2.0000 0.0000 Constraint 3 559 0.8000 1.0000 2.0000 0.0000 Constraint 3 551 0.8000 1.0000 2.0000 0.0000 Constraint 3 545 0.8000 1.0000 2.0000 0.0000 Constraint 3 540 0.8000 1.0000 2.0000 0.0000 Constraint 3 533 0.8000 1.0000 2.0000 0.0000 Constraint 3 526 0.8000 1.0000 2.0000 0.0000 Constraint 3 517 0.8000 1.0000 2.0000 0.0000 Constraint 3 512 0.8000 1.0000 2.0000 0.0000 Constraint 3 502 0.8000 1.0000 2.0000 0.0000 Constraint 3 491 0.8000 1.0000 2.0000 0.0000 Constraint 3 483 0.8000 1.0000 2.0000 0.0000 Constraint 3 470 0.8000 1.0000 2.0000 0.0000 Constraint 3 463 0.8000 1.0000 2.0000 0.0000 Constraint 3 455 0.8000 1.0000 2.0000 0.0000 Constraint 3 446 0.8000 1.0000 2.0000 0.0000 Constraint 3 434 0.8000 1.0000 2.0000 0.0000 Constraint 3 427 0.8000 1.0000 2.0000 0.0000 Constraint 3 418 0.8000 1.0000 2.0000 0.0000 Constraint 3 410 0.8000 1.0000 2.0000 0.0000 Constraint 3 402 0.8000 1.0000 2.0000 0.0000 Constraint 3 391 0.8000 1.0000 2.0000 0.0000 Constraint 3 383 0.8000 1.0000 2.0000 0.0000 Constraint 3 374 0.8000 1.0000 2.0000 0.0000 Constraint 3 369 0.8000 1.0000 2.0000 0.0000 Constraint 3 350 0.8000 1.0000 2.0000 0.0000 Constraint 3 340 0.8000 1.0000 2.0000 0.0000 Constraint 3 329 0.8000 1.0000 2.0000 0.0000 Constraint 3 324 0.8000 1.0000 2.0000 0.0000 Constraint 3 319 0.8000 1.0000 2.0000 0.0000 Constraint 3 312 0.8000 1.0000 2.0000 0.0000 Constraint 3 306 0.8000 1.0000 2.0000 0.0000 Constraint 3 295 0.8000 1.0000 2.0000 0.0000 Constraint 3 287 0.8000 1.0000 2.0000 0.0000 Constraint 3 280 0.8000 1.0000 2.0000 0.0000 Constraint 3 274 0.8000 1.0000 2.0000 0.0000 Constraint 3 263 0.8000 1.0000 2.0000 0.0000 Constraint 3 255 0.8000 1.0000 2.0000 0.0000 Constraint 3 243 0.8000 1.0000 2.0000 0.0000 Constraint 3 234 0.8000 1.0000 2.0000 0.0000 Constraint 3 223 0.8000 1.0000 2.0000 0.0000 Constraint 3 212 0.8000 1.0000 2.0000 0.0000 Constraint 3 206 0.8000 1.0000 2.0000 0.0000 Constraint 3 197 0.8000 1.0000 2.0000 0.0000 Constraint 3 189 0.8000 1.0000 2.0000 0.0000 Constraint 3 183 0.8000 1.0000 2.0000 0.0000 Constraint 3 173 0.8000 1.0000 2.0000 0.0000 Constraint 3 165 0.8000 1.0000 2.0000 0.0000 Constraint 3 157 0.8000 1.0000 2.0000 0.0000 Constraint 3 146 0.8000 1.0000 2.0000 0.0000 Constraint 3 130 0.8000 1.0000 2.0000 0.0000 Constraint 3 117 0.8000 1.0000 2.0000 0.0000 Constraint 3 110 0.8000 1.0000 2.0000 0.0000 Constraint 3 97 0.8000 1.0000 2.0000 0.0000 Constraint 3 86 0.8000 1.0000 2.0000 0.0000 Constraint 3 78 0.8000 1.0000 2.0000 0.0000 Constraint 3 68 0.8000 1.0000 2.0000 0.0000 Constraint 3 62 0.8000 1.0000 2.0000 0.0000 Constraint 3 54 0.8000 1.0000 2.0000 0.0000 Constraint 3 43 0.8000 1.0000 2.0000 0.0000 Constraint 3 36 0.8000 1.0000 2.0000 0.0000 Constraint 3 25 0.8000 1.0000 2.0000 0.0000 Constraint 3 17 0.8000 1.0000 2.0000 0.0000 Constraint 3 9 0.8000 1.0000 2.0000 0.0000 Done printing distance constraints # command: