# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/ # command:# reading dunbrack-2191.atoms # #computed average backbone with maximum peptide_sq_deviance = 0.002 # computed average trans backbone unit from 53157 examples # computed average trans backbone unit before proline from 2010 examples # computed average cis backbone unit from 97 examples # trans (non-proline) backbone unit: # CA= -2.2087 1.0126 -0.0030 # O= -0.1499 2.2440 0.0016 # C= -0.6889 1.1368 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4581 -0.0000 0.0000 # cis backbone unit: # CA= -0.1436 2.4534 -0.0002 # O= -2.0284 0.9742 0.0015 # C= -0.8018 1.0771 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4668 0.0000 0.0000 # trans backbone unit before proline: # CA= -2.2100 1.0631 -0.0014 # O= -0.1236 2.2458 0.0075 # C= -0.6872 1.1517 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4660 0.0000 0.0000 # After reading dunbrack-2191.atoms have 2191 chains in training database # Count of chains,residues,atoms: 2191,500310,3902258 # 493341 residues have no bad marker # 3226 residues lack atoms needed to compute omega # 1453 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 4 # HAS_OXT 1167 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 3052 # HAS_UNKNOWN_ATOMS 9 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 979 # NON_PLANAR_PEPTIDE 888 # BAD_PEPTIDE 2680 # Note: may sum to more than number of residues, # because one residue may have multiple problems # command:# Reading rotamer library from dunbrack-2191.rot # command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/ # command:# ReadAtomType exp-pdb.types Read AtomType exp-pdb with 49 types. # command:# ReadClashTable exp-pdb-2191-2symm.clash # Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2 # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0288/ # command:# Making conformation for sequence T0288 numbered 1 through 93 Created new target T0288 from T0288.a2m # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0288/ # command:# reading script from file T0288.t04.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0288-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1g9oA/T0288-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0288-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set T0288 2 :MVPGKVTLQKDAQN 1g9oA 10 :MLPRLCCLEKGPNG # choosing archetypes in rotamer library T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=4 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_820697697.pdb -s /var/tmp/to_scwrl_820697697.seq -o /var/tmp/from_scwrl_820697697.pdb > /var/tmp/scwrl_820697697.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_820697697.pdb Number of alignments=1 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0288-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2fe5A expands to /projects/compbio/data/pdb/2fe5.pdb.gz 2fe5A:Skipped atom 9, because occupancy 0.3 <= existing 0.700 in 2fe5A Skipped atom 13, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 15, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 17, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 19, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 42, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 44, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 47, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 51, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 53, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 55, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 57, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 59, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 294, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 296, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 298, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 300, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 302, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 317, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 320, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 431, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 433, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 435, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 437, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 439, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 441, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 443, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 593, because occupancy 0.250 <= existing 0.750 in 2fe5A Skipped atom 597, because occupancy 0.250 <= existing 0.750 in 2fe5A Skipped atom 599, because occupancy 0.250 <= existing 0.750 in 2fe5A Skipped atom 618, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 620, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 622, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 624, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 626, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 628, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 630, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 632, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 634, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 636, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 638, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 640, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 642, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 644, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 646, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 648, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 650, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 652, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 654, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 656, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 658, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 660, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 662, because occupancy 0.500 <= existing 0.500 in 2fe5A # T0288 read from 2fe5A/T0288-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0288-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2fe5A to template set # found chain 2fe5A in template set T0288 1 :SMVPGKVTLQKDAQN 2fe5A 221 :SMTIMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=7 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_655858699.pdb -s /var/tmp/to_scwrl_655858699.seq -o /var/tmp/from_scwrl_655858699.pdb > /var/tmp/scwrl_655858699.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_655858699.pdb Number of alignments=2 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0288-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1tp5A expands to /projects/compbio/data/pdb/1tp5.pdb.gz 1tp5A:# T0288 read from 1tp5A/T0288-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0288-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1tp5A to template set # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 1 :SMVPGKVTLQKDAQN 1tp5A 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1tp5A 323 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNKL 1tp5A 390 :AQYK Number of specific fragments extracted= 4 number of extra gaps= 1 total=11 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1583571042.pdb -s /var/tmp/to_scwrl_1583571042.seq -o /var/tmp/from_scwrl_1583571042.pdb > /var/tmp/scwrl_1583571042.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1583571042.pdb Number of alignments=3 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0288-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2fcfA expands to /projects/compbio/data/pdb/2fcf.pdb.gz 2fcfA:Skipped atom 598, because occupancy 0.500 <= existing 0.500 in 2fcfA Skipped atom 602, because occupancy 0.500 <= existing 0.500 in 2fcfA Skipped atom 604, because occupancy 0.500 <= existing 0.500 in 2fcfA Skipped atom 606, because occupancy 0.500 <= existing 0.500 in 2fcfA # T0288 read from 2fcfA/T0288-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0288-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2fcfA to template set # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=14 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_559301039.pdb -s /var/tmp/to_scwrl_559301039.seq -o /var/tmp/from_scwrl_559301039.pdb > /var/tmp/scwrl_559301039.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_559301039.pdb Number of alignments=4 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavA/T0288-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1qavA expands to /projects/compbio/data/pdb/1qav.pdb.gz 1qavA:# T0288 read from 1qavA/T0288-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1qavA read from 1qavA/T0288-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1qavA to template set # found chain 1qavA in template set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1qavA 76 :SLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 1 number of extra gaps= 0 total=15 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1395132001.pdb -s /var/tmp/to_scwrl_1395132001.seq -o /var/tmp/from_scwrl_1395132001.pdb > /var/tmp/scwrl_1395132001.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1395132001.pdb Number of alignments=5 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0288-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2f0aA expands to /projects/compbio/data/pdb/2f0a.pdb.gz 2f0aA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0288 read from 2f0aA/T0288-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0288-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2f0aA to template set # found chain 2f0aA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f0aA)E342 T0288 4 :PGKVTLQ 2f0aA 252 :IITVTLN T0288 16 :LIGISIGG 2f0aA 264 :FLGISIVG T0288 24 :GAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 274 :NERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHYNKL 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=19 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1186090427.pdb -s /var/tmp/to_scwrl_1186090427.seq -o /var/tmp/from_scwrl_1186090427.pdb > /var/tmp/scwrl_1186090427.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1186090427.pdb Number of alignments=6 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/T0288-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1wf7A expands to /projects/compbio/data/pdb/1wf7.pdb.gz 1wf7A:# T0288 read from 1wf7A/T0288-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1wf7A read from 1wf7A/T0288-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1wf7A to template set # found chain 1wf7A in template set T0288 2 :MVPGKVTLQ 1wf7A 4 :GSSGSVSLV T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA Number of specific fragments extracted= 3 number of extra gaps= 0 total=22 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1974806402.pdb -s /var/tmp/to_scwrl_1974806402.seq -o /var/tmp/from_scwrl_1974806402.pdb > /var/tmp/scwrl_1974806402.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1974806402.pdb Number of alignments=7 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/T0288-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2f5yA expands to /projects/compbio/data/pdb/2f5y.pdb.gz 2f5yA:Skipped atom 397, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 401, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 403, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 405, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 407, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 409, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 411, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 413, because occupancy 0.500 <= existing 0.500 in 2f5yA # T0288 read from 2f5yA/T0288-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f5yA read from 2f5yA/T0288-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2f5yA to template set # found chain 2f5yA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)V3 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f5yA)V95 T0288 4 :PGKVTLQKDAQN 2f5yA 16 :YRQITIPRGKDG T0288 17 :IGISIGG 2f5yA 28 :FGFTICC T0288 28 :CPCLYIVQVFDNTPAALDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIHYNKL 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 5 number of extra gaps= 1 total=27 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1473144499.pdb -s /var/tmp/to_scwrl_1473144499.seq -o /var/tmp/from_scwrl_1473144499.pdb > /var/tmp/scwrl_1473144499.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1473144499.pdb Number of alignments=8 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1i16/T0288-1i16-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1i16 expands to /projects/compbio/data/pdb/1i16.pdb.gz 1i16:Warning: there is no chain 1i16 will retry with 1i16A # T0288 read from 1i16/T0288-1i16-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1i16 read from 1i16/T0288-1i16-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1i16 to template set # found chain 1i16 in template set T0288 2 :MVPGKVTLQKDAQN 1i16 28 :ATVCTVTLEKMSAG T0288 17 :IGISIGGGAQYCP 1i16 42 :LGFSLEGGKGSLH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i16 58 :PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0288 78 :KGEVTIHYNKLQYY 1i16 107 :DGPVTIVIRRKSLQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=31 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1739000680.pdb -s /var/tmp/to_scwrl_1739000680.seq -o /var/tmp/from_scwrl_1739000680.pdb > /var/tmp/scwrl_1739000680.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1739000680.pdb Number of alignments=9 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1fc6A/T0288-1fc6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1fc6A/T0288-1fc6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1fc6A read from 1fc6A/T0288-1fc6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1fc6A in training set T0288 15 :NLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 161 :TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMI 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0288 77 :VKGEVTIHYNKLQY 1fc6A 223 :ADSQVEVVLHAPGA Number of specific fragments extracted= 3 number of extra gaps= 0 total=34 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1498617646.pdb -s /var/tmp/to_scwrl_1498617646.seq -o /var/tmp/from_scwrl_1498617646.pdb > /var/tmp/scwrl_1498617646.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1498617646.pdb Number of alignments=10 # command:# reading script from file T0288.t06.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0288-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1g9oA/T0288-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0288-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set T0288 1 :SMVPGKVTLQKDAQN 1g9oA 9 :RMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLL T0288 85 :YNKL 1g9oA 93 :PETD Number of specific fragments extracted= 5 number of extra gaps= 0 total=39 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_669908538.pdb -s /var/tmp/to_scwrl_669908538.seq -o /var/tmp/from_scwrl_669908538.pdb > /var/tmp/scwrl_669908538.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_669908538.pdb Number of alignments=11 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1fc6A/T0288-1fc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1fc6A/T0288-1fc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1fc6A read from 1fc6A/T0288-1fc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1fc6A in training set T0288 15 :NLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 161 :TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMI 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0288 77 :VKGEVTIH 1fc6A 223 :ADSQVEVV T0288 85 :YNKLQY 1fc6A 237 :PSNTRT Number of specific fragments extracted= 4 number of extra gaps= 0 total=43 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1387036158.pdb -s /var/tmp/to_scwrl_1387036158.seq -o /var/tmp/from_scwrl_1387036158.pdb > /var/tmp/scwrl_1387036158.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1387036158.pdb Number of alignments=12 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0288-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2fcfA/T0288-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0288-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYK 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTR Number of specific fragments extracted= 3 number of extra gaps= 1 total=46 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_12895151.pdb -s /var/tmp/to_scwrl_12895151.seq -o /var/tmp/from_scwrl_12895151.pdb > /var/tmp/scwrl_12895151.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_12895151.pdb Number of alignments=13 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0288-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1tp5A/T0288-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0288-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 1 :SMVPGKVTLQKDAQN 1tp5A 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQY 1tp5A 323 :LGFNIVGGEDG T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT Number of specific fragments extracted= 3 number of extra gaps= 1 total=49 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1144522534.pdb -s /var/tmp/to_scwrl_1144522534.seq -o /var/tmp/from_scwrl_1144522534.pdb > /var/tmp/scwrl_1144522534.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1144522534.pdb Number of alignments=14 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/T0288-2fneA-t06-global-adpstyle1.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2fneA expands to /projects/compbio/data/pdb/2fne.pdb.gz 2fneA:Skipped atom 15, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 19, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 21, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 23, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 25, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 27, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 658, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 662, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 664, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 666, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 668, because occupancy 0.500 <= existing 0.500 in 2fneA # T0288 read from 2fneA/T0288-2fneA-t06-global-adpstyle1.a2m # 2fneA read from 2fneA/T0288-2fneA-t06-global-adpstyle1.a2m # adding 2fneA to template set # found chain 2fneA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2fneA)M1954 Warning: unaligning (T0288)K92 because last residue in template chain is (2fneA)V2048 T0288 4 :P 2fneA 1955 :P T0288 5 :GKVTLQKDAQN 2fneA 1958 :KSITLERGPDG T0288 17 :IGISIGGGAQYCP 2fneA 1969 :LGFSIVGGYGSPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fneA 1985 :PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLM T0288 85 :YNKLQYY 2fneA 2041 :LSSDETS Number of specific fragments extracted= 5 number of extra gaps= 0 total=54 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1812282133.pdb -s /var/tmp/to_scwrl_1812282133.seq -o /var/tmp/from_scwrl_1812282133.pdb > /var/tmp/scwrl_1812282133.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1812282133.pdb Number of alignments=15 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0288-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2fe5A/T0288-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0288-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fe5A in template set T0288 1 :SMVPGKVTLQKDAQN 2fe5A 221 :SMTIMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLK Number of specific fragments extracted= 3 number of extra gaps= 0 total=57 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1328104338.pdb -s /var/tmp/to_scwrl_1328104338.seq -o /var/tmp/from_scwrl_1328104338.pdb > /var/tmp/scwrl_1328104338.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1328104338.pdb Number of alignments=16 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zokA/T0288-1zokA-t06-global-adpstyle1.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1zokA expands to /projects/compbio/data/pdb/1zok.pdb.gz 1zokA:# T0288 read from 1zokA/T0288-1zokA-t06-global-adpstyle1.a2m # 1zokA read from 1zokA/T0288-1zokA-t06-global-adpstyle1.a2m # adding 1zokA to template set # found chain 1zokA in template set Warning: unaligning (T0288)Y91 because last residue in template chain is (1zokA)F313 T0288 1 :SMV 1zokA 221 :EYE T0288 6 :KVTLQKDAQN 1zokA 224 :EITLERGNSG T0288 17 :IGISIGGGAQYCP 1zokA 234 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1zokA 252 :SIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRRKA Number of specific fragments extracted= 4 number of extra gaps= 0 total=61 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1380171691.pdb -s /var/tmp/to_scwrl_1380171691.seq -o /var/tmp/from_scwrl_1380171691.pdb > /var/tmp/scwrl_1380171691.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1380171691.pdb Number of alignments=17 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2bygA/T0288-2bygA-t06-global-adpstyle1.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2bygA expands to /projects/compbio/data/pdb/2byg.pdb.gz 2bygA:# T0288 read from 2bygA/T0288-2bygA-t06-global-adpstyle1.a2m # 2bygA read from 2bygA/T0288-2bygA-t06-global-adpstyle1.a2m # adding 2bygA to template set # found chain 2bygA in template set Warning: unaligning (T0288)K92 because last residue in template chain is (2bygA)Y283 T0288 1 :SMVPGKVTLQKDAQN 2bygA 188 :SMTVVEIKLFKGPKG T0288 17 :IGISIGGGAQYCP 2bygA 203 :LGFSIAGGVGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 2bygA 221 :SIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKPTTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=64 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1113502214.pdb -s /var/tmp/to_scwrl_1113502214.seq -o /var/tmp/from_scwrl_1113502214.pdb > /var/tmp/scwrl_1113502214.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1113502214.pdb Number of alignments=18 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wfvA/T0288-1wfvA-t06-global-adpstyle1.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1wfvA expands to /projects/compbio/data/pdb/1wfv.pdb.gz 1wfvA:# T0288 read from 1wfvA/T0288-1wfvA-t06-global-adpstyle1.a2m # 1wfvA read from 1wfvA/T0288-1wfvA-t06-global-adpstyle1.a2m # adding 1wfvA to template set # found chain 1wfvA in template set Warning: unaligning (T0288)L88 because last residue in template chain is (1wfvA)G103 T0288 1 :SMVPGKVTLQKDAQN 1wfvA 9 :DFDYFTVDMEKGAKG T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1wfvA 24 :FGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLL T0288 85 :YNK 1wfvA 100 :PSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=67 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_860516127.pdb -s /var/tmp/to_scwrl_860516127.seq -o /var/tmp/from_scwrl_860516127.pdb > /var/tmp/scwrl_860516127.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_860516127.pdb Number of alignments=19 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vj6A/T0288-1vj6A-t06-global-adpstyle1.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1vj6A expands to /projects/compbio/data/pdb/1vj6.pdb.gz 1vj6A:# T0288 read from 1vj6A/T0288-1vj6A-t06-global-adpstyle1.a2m # 1vj6A read from 1vj6A/T0288-1vj6A-t06-global-adpstyle1.a2m # adding 1vj6A to template set # found chain 1vj6A in template set Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0288)D45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 Warning: unaligning (T0288)Y91 because last residue in template chain is (1vj6A)P102 T0288 1 :SMVPGKVTLQKDAQN 1vj6A 10 :PGDTFEVELAKTDGS T0288 17 :IGISIGGGAQYCP 1vj6A 25 :LGISVTGGVNTSV T0288 30 :CLYIVQVFD 1vj6A 41 :GIYVKAIIP T0288 41 :PAA 1vj6A 52 :AAE T0288 46 :GT 1vj6A 57 :GR T0288 50 :AGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQV Number of specific fragments extracted= 6 number of extra gaps= 3 total=73 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_777720504.pdb -s /var/tmp/to_scwrl_777720504.seq -o /var/tmp/from_scwrl_777720504.pdb > /var/tmp/scwrl_777720504.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_777720504.pdb Number of alignments=20 # command:# reading script from file T0288.t2k.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0288-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2fe5A/T0288-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0288-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fe5A in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=75 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1543755628.pdb -s /var/tmp/to_scwrl_1543755628.seq -o /var/tmp/from_scwrl_1543755628.pdb > /var/tmp/scwrl_1543755628.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1543755628.pdb Number of alignments=21 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0288-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1g9oA/T0288-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0288-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=78 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1722060048.pdb -s /var/tmp/to_scwrl_1722060048.seq -o /var/tmp/from_scwrl_1722060048.pdb > /var/tmp/scwrl_1722060048.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1722060048.pdb Number of alignments=22 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0288-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1tp5A/T0288-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0288-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNK 1tp5A 390 :AQY Number of specific fragments extracted= 3 number of extra gaps= 1 total=81 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1455590963.pdb -s /var/tmp/to_scwrl_1455590963.seq -o /var/tmp/from_scwrl_1455590963.pdb > /var/tmp/scwrl_1455590963.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1455590963.pdb Number of alignments=23 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0288-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2fcfA/T0288-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0288-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 4 :PGKVTLQKD 2fcfA 1149 :PRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=84 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_328298285.pdb -s /var/tmp/to_scwrl_328298285.seq -o /var/tmp/from_scwrl_328298285.pdb > /var/tmp/scwrl_328298285.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_328298285.pdb Number of alignments=24 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n99A/T0288-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1n99A expands to /projects/compbio/data/pdb/1n99.pdb.gz 1n99A:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0288 read from 1n99A/T0288-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1n99A read from 1n99A/T0288-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1n99A to template set # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGE T0288 81 :VTI 1n99A 186 :ITM T0288 86 :NKLQYYK 1n99A 191 :RDRPFER Number of specific fragments extracted= 5 number of extra gaps= 1 total=89 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_70636429.pdb -s /var/tmp/to_scwrl_70636429.seq -o /var/tmp/from_scwrl_70636429.pdb > /var/tmp/scwrl_70636429.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_70636429.pdb Number of alignments=25 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0288-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2f0aA/T0288-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0288-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f0aA in template set Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f0aA)E342 T0288 16 :LIGISIGGGAQ 2f0aA 264 :FLGISIVGQSN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHYNKL 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 3 number of extra gaps= 1 total=92 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_136495343.pdb -s /var/tmp/to_scwrl_136495343.seq -o /var/tmp/from_scwrl_136495343.pdb > /var/tmp/scwrl_136495343.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_136495343.pdb Number of alignments=26 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1i16/T0288-1i16-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1i16/T0288-1i16-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1i16 read from 1i16/T0288-1i16-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1i16 in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG T0288 81 :VTIHY 1i16 110 :VTIVI T0288 87 :KLQYYK 1i16 115 :RRKSLQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=96 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1472576334.pdb -s /var/tmp/to_scwrl_1472576334.seq -o /var/tmp/from_scwrl_1472576334.pdb > /var/tmp/scwrl_1472576334.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1472576334.pdb Number of alignments=27 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/T0288-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1wf7A/T0288-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1wf7A read from 1wf7A/T0288-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1wf7A in template set T0288 7 :VTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 7 :GSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA Number of specific fragments extracted= 2 number of extra gaps= 0 total=98 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_402903177.pdb -s /var/tmp/to_scwrl_402903177.seq -o /var/tmp/from_scwrl_402903177.pdb > /var/tmp/scwrl_402903177.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_402903177.pdb Number of alignments=28 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/T0288-2f5yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2f5yA/T0288-2f5yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f5yA read from 2f5yA/T0288-2f5yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f5yA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)P4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 5 :GKVTLQKDAQNLIGISIGGG 2f5yA 16 :YRQITIPRGKDGFGFTICCD T0288 29 :PCLYIVQVFDNTPAALDG 2f5yA 36 :SPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIHYNKL 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=102 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1329202899.pdb -s /var/tmp/to_scwrl_1329202899.seq -o /var/tmp/from_scwrl_1329202899.pdb > /var/tmp/scwrl_1329202899.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1329202899.pdb Number of alignments=29 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1fc6A/T0288-1fc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1fc6A/T0288-1fc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1fc6A read from 1fc6A/T0288-1fc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1fc6A in training set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 159 :SVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMI 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0288 77 :VKGEVTIHYNKLQY 1fc6A 223 :ADSQVEVVLHAPGA Number of specific fragments extracted= 3 number of extra gaps= 0 total=105 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1503885237.pdb -s /var/tmp/to_scwrl_1503885237.seq -o /var/tmp/from_scwrl_1503885237.pdb > /var/tmp/scwrl_1503885237.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1503885237.pdb Number of alignments=30 # command:# reading script from file T0288.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0288-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1g9oA/T0288-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0288-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set T0288 2 :MVPGKVTLQKDAQN 1g9oA 10 :MLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=109 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1219407970.pdb -s /var/tmp/to_scwrl_1219407970.seq -o /var/tmp/from_scwrl_1219407970.pdb > /var/tmp/scwrl_1219407970.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1219407970.pdb Number of alignments=31 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0288-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2fe5A/T0288-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0288-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fe5A in template set T0288 1 :SMVPGKVTLQKDAQN 2fe5A 221 :SMTIMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=112 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_2416949.pdb -s /var/tmp/to_scwrl_2416949.seq -o /var/tmp/from_scwrl_2416949.pdb > /var/tmp/scwrl_2416949.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2416949.pdb Number of alignments=32 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0288-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1tp5A/T0288-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0288-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 1 :SMVPGKVTLQKDAQN 1tp5A 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1tp5A 323 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNKL 1tp5A 390 :AQYK Number of specific fragments extracted= 4 number of extra gaps= 1 total=116 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_12260289.pdb -s /var/tmp/to_scwrl_12260289.seq -o /var/tmp/from_scwrl_12260289.pdb > /var/tmp/scwrl_12260289.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_12260289.pdb Number of alignments=33 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0288-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2fcfA/T0288-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0288-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=119 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_655495367.pdb -s /var/tmp/to_scwrl_655495367.seq -o /var/tmp/from_scwrl_655495367.pdb > /var/tmp/scwrl_655495367.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_655495367.pdb Number of alignments=34 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0288-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2f0aA/T0288-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0288-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f0aA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f0aA)E342 T0288 4 :PGKVTLQ 2f0aA 252 :IITVTLN T0288 16 :LIGISIGG 2f0aA 264 :FLGISIVG T0288 24 :GAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 274 :NERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHYNKL 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=123 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_561717988.pdb -s /var/tmp/to_scwrl_561717988.seq -o /var/tmp/from_scwrl_561717988.pdb > /var/tmp/scwrl_561717988.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_561717988.pdb Number of alignments=35 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/T0288-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1wf7A/T0288-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1wf7A read from 1wf7A/T0288-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1wf7A in template set T0288 2 :MVPGKVTLQ 1wf7A 4 :GSSGSVSLV T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA Number of specific fragments extracted= 3 number of extra gaps= 0 total=126 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1407392291.pdb -s /var/tmp/to_scwrl_1407392291.seq -o /var/tmp/from_scwrl_1407392291.pdb > /var/tmp/scwrl_1407392291.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1407392291.pdb Number of alignments=36 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1fc6A/T0288-1fc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1fc6A/T0288-1fc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1fc6A read from 1fc6A/T0288-1fc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1fc6A in training set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 159 :SVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMI 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0288 77 :VKGEVTIHYNKLQY 1fc6A 223 :ADSQVEVVLHAPGA Number of specific fragments extracted= 3 number of extra gaps= 0 total=129 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1841585794.pdb -s /var/tmp/to_scwrl_1841585794.seq -o /var/tmp/from_scwrl_1841585794.pdb > /var/tmp/scwrl_1841585794.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1841585794.pdb Number of alignments=37 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/T0288-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2f5yA/T0288-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f5yA read from 2f5yA/T0288-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f5yA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)V3 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f5yA)V95 T0288 4 :PGKVTLQKDAQN 2f5yA 16 :YRQITIPRGKDG T0288 17 :IGISIGG 2f5yA 28 :FGFTICC T0288 28 :CPCLYIVQVFDNTPAALDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIHYNKL 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 5 number of extra gaps= 1 total=134 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_389040743.pdb -s /var/tmp/to_scwrl_389040743.seq -o /var/tmp/from_scwrl_389040743.pdb > /var/tmp/scwrl_389040743.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_389040743.pdb Number of alignments=38 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1i16/T0288-1i16-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1i16/T0288-1i16-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1i16 read from 1i16/T0288-1i16-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1i16 in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG T0288 81 :VTIHY 1i16 110 :VTIVI T0288 87 :KLQYYK 1i16 115 :RRKSLQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=138 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_733053144.pdb -s /var/tmp/to_scwrl_733053144.seq -o /var/tmp/from_scwrl_733053144.pdb > /var/tmp/scwrl_733053144.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_733053144.pdb Number of alignments=39 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n99A/T0288-1n99A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1n99A/T0288-1n99A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1n99A read from 1n99A/T0288-1n99A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM T0288 86 :NKLQYY 1n99A 191 :RDRPFE Number of specific fragments extracted= 5 number of extra gaps= 1 total=143 # request to SCWRL produces command: ulimit -t 84 ; scwrl3 -i /var/tmp/to_scwrl_1433102828.pdb -s /var/tmp/to_scwrl_1433102828.seq -o /var/tmp/from_scwrl_1433102828.pdb > /var/tmp/scwrl_1433102828.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1433102828.pdb Number of alignments=40 # command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0288//projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0288/manyalignments-local.under or /projects/compbio/experiments/protein-predict/casp7/T0288//projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0288/manyalignments-local.under.gz for input Trying /projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0288/manyalignments-local.under # reading script from file /projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0288/manyalignments-local.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ky9B/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ky9B expands to /projects/compbio/data/pdb/1ky9.pdb.gz 1ky9B:# T0288 read from 1ky9B/merged-local-a2m # 1ky9B read from 1ky9B/merged-local-a2m # adding 1ky9B to template set # found chain 1ky9B in template set Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9B)P231 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1ky9B)P231 Warning: unaligning (T0288)I74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0288)E76 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0288 14 :QNLIGISIGGG 1ky9B 219 :GELIGINTAIL T0288 27 :YC 1ky9B 232 :DG T0288 29 :PCLYIVQVFDNTPAALDG 1ky9B 286 :RGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKM 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQVG T0288 77 :VKGEVTI 1ky9B 333 :VGSKLTL Number of specific fragments extracted= 5 number of extra gaps= 1 total=148 Number of alignments=41 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)D12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)A86 Warning: unaligning (T0288)Q14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)A86 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9B)P231 Warning: unaligning (T0288)I74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0288)E76 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0288 10 :QK 1ky9B 82 :QK T0288 15 :NLIGISIGGG 1ky9B 87 :LGSGVIIDAD T0288 29 :PCLYIVQVFDNTPAALDG 1ky9B 286 :RGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKM 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQVG T0288 77 :VKGEVTIH 1ky9B 333 :VGSKLTLG Number of specific fragments extracted= 5 number of extra gaps= 1 total=153 Number of alignments=42 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)G24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)K281 Warning: unaligning (T0288)I74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0288)E76 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1ky9B 282 :VDAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKM 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQVG T0288 77 :VKGEVTIHYNKLQ 1ky9B 333 :VGSKLTLGLLRDG Number of specific fragments extracted= 3 number of extra gaps= 0 total=156 Number of alignments=43 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)I74 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0288)E76 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0288 30 :CLYIVQVFDNTPAALDG 1ky9B 287 :GAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKM 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQVG T0288 77 :VKGEVTIHYNKL 1ky9B 333 :VGSKLTLGLLRD Number of specific fragments extracted= 3 number of extra gaps= 0 total=159 Number of alignments=44 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)G24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)K281 T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1ky9B 282 :VDAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKG 1ky9B 304 :IKAGDVITSLNGKPISS T0288 71 :AKMIQEV 1ky9B 321 :FAALRAQ T0288 78 :KGEVTIHYNKLQY 1ky9B 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 4 number of extra gaps= 0 total=163 Number of alignments=45 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)E76 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 T0288 30 :CLYIVQVFDNTPAALDG 1ky9B 287 :GAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKG 1ky9B 304 :IKAGDVITSLNGKPISS T0288 67 :KVEVAKMIQ 1ky9B 321 :FAALRAQVG T0288 78 :KGEVTIHYNKLQY 1ky9B 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 4 number of extra gaps= 0 total=167 Number of alignments=46 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)G24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)K281 T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1ky9B 282 :VDAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVA 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=169 Number of alignments=47 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set T0288 26 :QYCPCLYIVQVFDNTPAALDG 1ky9B 283 :DAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVA 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=171 Number of alignments=48 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)G24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)K281 T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1ky9B 282 :VDAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKG 1ky9B 304 :IKAGDVITSLNGKPISS T0288 71 :AKMIQEV 1ky9B 321 :FAALRAQ T0288 78 :KGEVTIH 1ky9B 334 :GSKLTLG T0288 85 :YNK 1ky9B 343 :RDG Number of specific fragments extracted= 5 number of extra gaps= 0 total=176 Number of alignments=49 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9B)P231 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1ky9B)P231 Warning: unaligning (T0288)E76 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 T0288 11 :KDAQNLIGISIGGG 1ky9B 216 :NLNGELIGINTAIL T0288 27 :YCP 1ky9B 232 :DGG T0288 30 :CLYIVQVFDNTPAALDG 1ky9B 287 :GAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKG 1ky9B 304 :IKAGDVITSLNGKPISS T0288 67 :KVEVAKMIQ 1ky9B 321 :FAALRAQVG T0288 78 :KGEVTIH 1ky9B 334 :GSKLTLG T0288 85 :YNKLQYY 1ky9B 342 :LRDGKQV Number of specific fragments extracted= 7 number of extra gaps= 1 total=183 Number of alignments=50 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)I19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G269 Warning: unaligning (T0288)I21 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)G269 T0288 15 :NLIG 1ky9B 263 :GELG T0288 22 :GGGAQ 1ky9B 270 :TELNS T0288 27 :YCPCLYIVQVFDNTPAALDG 1ky9B 284 :AQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVA 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=187 Number of alignments=51 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set T0288 27 :YCPCLYIVQVFDNTPAALDG 1ky9B 284 :AQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTK 1ky9B 304 :IKAGDVITSLNGKPISSFAA Number of specific fragments extracted= 2 number of extra gaps= 0 total=189 Number of alignments=52 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)I19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G269 Warning: unaligning (T0288)I21 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)G269 T0288 16 :LIG 1ky9B 264 :ELG T0288 22 :GGGAQ 1ky9B 270 :TELNS T0288 27 :YCPCLYIVQVFDNTPAALDG 1ky9B 284 :AQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKG 1ky9B 304 :IKAGDVITSLNGKPISS T0288 71 :AKMIQ 1ky9B 321 :FAALR Number of specific fragments extracted= 5 number of extra gaps= 0 total=194 Number of alignments=53 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0288)I19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G269 Warning: unaligning (T0288)I21 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)G269 T0288 16 :LIG 1ky9B 264 :ELG T0288 22 :GGGAQ 1ky9B 270 :TELNS T0288 27 :YCPCLYIVQVFDNTPAALDG 1ky9B 284 :AQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKG 1ky9B 304 :IKAGDVITSLNGKPISS T0288 67 :KVEVAKM 1ky9B 321 :FAALRAQ Number of specific fragments extracted= 5 number of extra gaps= 0 total=199 Number of alignments=54 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1um7A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1um7A expands to /projects/compbio/data/pdb/1um7.pdb.gz 1um7A:# T0288 read from 1um7A/merged-local-a2m # 1um7A read from 1um7A/merged-local-a2m # adding 1um7A to template set # found chain 1um7A in template set T0288 3 :VPGKVTLQKDAQN 1um7A 15 :EPRKIILHKGSTG T0288 17 :IGISIGGGAQYC 1um7A 28 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1um7A 40 :GIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=202 Number of alignments=55 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0288 3 :VPGKVTLQKDAQN 1um7A 15 :EPRKIILHKGSTG T0288 17 :IGISIGGGAQYC 1um7A 28 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1um7A 40 :GIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYR Number of specific fragments extracted= 3 number of extra gaps= 0 total=205 Number of alignments=56 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0288 4 :PGKVTLQKDAQN 1um7A 16 :PRKIILHKGSTG T0288 17 :IGISIGGGAQ 1um7A 28 :LGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1um7A 38 :GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIV Number of specific fragments extracted= 3 number of extra gaps= 0 total=208 Number of alignments=57 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0288 3 :VPGKVTLQKDAQN 1um7A 15 :EPRKIILHKGSTG T0288 17 :IGISIGGGAQ 1um7A 28 :LGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1um7A 38 :GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIV T0288 85 :YN 1um7A 99 :PE Number of specific fragments extracted= 4 number of extra gaps= 0 total=212 Number of alignments=58 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0288 8 :TLQKDAQNLIGISIGGGAQ 1um7A 19 :IILHKGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1um7A 38 :GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTI Number of specific fragments extracted= 2 number of extra gaps= 0 total=214 Number of alignments=59 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1um7A 17 :RKIILHKGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1um7A 38 :GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVA Number of specific fragments extracted= 2 number of extra gaps= 0 total=216 Number of alignments=60 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1bfeA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1bfeA expands to /projects/compbio/data/pdb/1bfe.pdb.gz 1bfeA:# T0288 read from 1bfeA/merged-local-a2m # 1bfeA read from 1bfeA/merged-local-a2m # adding 1bfeA to template set # found chain 1bfeA in template set T0288 7 :VTLQKDAQ 1bfeA 314 :IVIHRGST T0288 16 :LIGISIGGGAQ 1bfeA 322 :GLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=219 Number of alignments=61 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 5 :GKVTLQKDAQ 1bfeA 312 :RRIVIHRGST T0288 16 :LIGISIGGGAQ 1bfeA 322 :GLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=222 Number of alignments=62 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 4 :PGKVTLQK 1bfeA 311 :PRRIVIHR T0288 13 :AQNLIGISIGGGAQ 1bfeA 319 :GSTGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIA Number of specific fragments extracted= 3 number of extra gaps= 0 total=225 Number of alignments=63 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 1 :SMVPGKVTLQKDAQN 1bfeA 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1bfeA 323 :LGFNIIGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1bfeA 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=228 Number of alignments=64 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 3 :VPGKVTLQKDAQN 1bfeA 310 :EPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1bfeA 323 :LGFNIIGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1bfeA 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 3 number of extra gaps= 0 total=231 Number of alignments=65 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 1 :SMVPGKVTLQKDAQN 1bfeA 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1bfeA 323 :LGFNIIGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1bfeA 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 3 number of extra gaps= 0 total=234 Number of alignments=66 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 2 :MVPGKVTLQKDAQN 1bfeA 309 :REPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1bfeA 323 :LGFNIIGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1bfeA 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 3 number of extra gaps= 0 total=237 Number of alignments=67 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 1 :SMVPGKVTLQKDAQN 1bfeA 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQ 1bfeA 323 :LGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII T0288 85 :YNKLQYY 1bfeA 394 :PEEYSRF Number of specific fragments extracted= 4 number of extra gaps= 0 total=241 Number of alignments=68 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 3 :VPGKVTLQKDAQN 1bfeA 310 :EPRRIVIHRGSTG T0288 17 :IGISIGGGAQ 1bfeA 323 :LGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII T0288 85 :YNK 1bfeA 394 :PEE Number of specific fragments extracted= 4 number of extra gaps= 0 total=245 Number of alignments=69 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 1 :SMVPGKVTLQKDAQN 1bfeA 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1bfeA 323 :LGFNIIGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1bfeA 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII Number of specific fragments extracted= 3 number of extra gaps= 0 total=248 Number of alignments=70 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 2 :MVPGKVTLQKDAQN 1bfeA 309 :REPRRIVIHRGSTG T0288 17 :IGISIGGGAQY 1bfeA 323 :LGFNIIGGEDG T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1bfeA 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII Number of specific fragments extracted= 3 number of extra gaps= 0 total=251 Number of alignments=71 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 8 :TLQKDAQNLIGISIGGGAQ 1bfeA 314 :IVIHRGSTGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTI Number of specific fragments extracted= 2 number of extra gaps= 0 total=253 Number of alignments=72 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1bfeA 312 :RRIVIHRGSTGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIA Number of specific fragments extracted= 2 number of extra gaps= 0 total=255 Number of alignments=73 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=257 Number of alignments=74 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1bfeA 309 :REPRRIVIHRGSTGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=259 Number of alignments=75 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1m5zA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1m5zA expands to /projects/compbio/data/pdb/1m5z.pdb.gz 1m5zA:# T0288 read from 1m5zA/merged-local-a2m # 1m5zA read from 1m5zA/merged-local-a2m # adding 1m5zA to template set # found chain 1m5zA in template set T0288 4 :PGKVTLQKDAQ 1m5zA 22 :LHKVTLYKDSG T0288 15 :NLIGISIGGGAQ 1m5zA 34 :EDFGFSVADGLL T0288 28 :CPCLYIVQVFDNTPAALDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLV Number of specific fragments extracted= 4 number of extra gaps= 0 total=263 Number of alignments=76 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 6 :KVTLQKDAQ 1m5zA 24 :KVTLYKDSG T0288 15 :NLIGISIGGGAQ 1m5zA 34 :EDFGFSVADGLL T0288 28 :CPCLYIVQVFDNTPAALDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLV Number of specific fragments extracted= 4 number of extra gaps= 0 total=267 Number of alignments=77 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0288)Q89 because last residue in template chain is (1m5zA)P106 T0288 1 :SMVPGKVTLQKDAQ 1m5zA 19 :PVELHKVTLYKDSG T0288 15 :NLIGISIGGGA 1m5zA 34 :EDFGFSVADGL T0288 27 :YCPCLYIVQVFDNTPAALDG 1m5zA 45 :LEKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=271 Number of alignments=78 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 3 :VPGKVTLQKDAQ 1m5zA 21 :ELHKVTLYKDSG T0288 15 :NLIGISIGGGA 1m5zA 34 :EDFGFSVADGL T0288 27 :YCPCLYIVQVFDNTPAALDG 1m5zA 45 :LEKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=275 Number of alignments=79 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0288)Q89 because last residue in template chain is (1m5zA)P106 T0288 1 :SMVPGKVTLQKDAQ 1m5zA 19 :PVELHKVTLYKDSG T0288 15 :NLIGISIGGGAQYC 1m5zA 34 :EDFGFSVADGLLEK T0288 30 :CLYIVQVFDNTPAALDG 1m5zA 48 :GVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=279 Number of alignments=80 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 1 :SMVPGKVTLQKDAQ 1m5zA 19 :PVELHKVTLYKDSG T0288 15 :NLIGISIGGGAQYC 1m5zA 34 :EDFGFSVADGLLEK T0288 30 :CLYIVQVFDNTPAALDG 1m5zA 48 :GVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=283 Number of alignments=81 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 1 :SMVPGKVTLQKDAQ 1m5zA 19 :PVELHKVTLYKDSG T0288 15 :NLIGISIGGGA 1m5zA 34 :EDFGFSVADGL T0288 27 :YCPCLYIVQVFDNTPAALDG 1m5zA 45 :LEKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLV Number of specific fragments extracted= 4 number of extra gaps= 0 total=287 Number of alignments=82 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 4 :PGKVTLQKDAQ 1m5zA 22 :LHKVTLYKDSG T0288 15 :NLIGISIGGGA 1m5zA 34 :EDFGFSVADGL T0288 27 :YCPCLYIVQVFDNTPAALDG 1m5zA 45 :LEKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVI Number of specific fragments extracted= 4 number of extra gaps= 0 total=291 Number of alignments=83 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 1 :SMVPGKVTLQKDAQ 1m5zA 19 :PVELHKVTLYKDSG T0288 15 :NLIGISIGGGAQ 1m5zA 34 :EDFGFSVADGLL T0288 28 :CPCLYIVQVFDNTPAALDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLV Number of specific fragments extracted= 4 number of extra gaps= 0 total=295 Number of alignments=84 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 1 :SMVPGKVTLQKDAQ 1m5zA 19 :PVELHKVTLYKDSG T0288 15 :NLIGISIGGGAQ 1m5zA 34 :EDFGFSVADGLL T0288 28 :CPCLYIVQVFDNTPAALDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLV Number of specific fragments extracted= 4 number of extra gaps= 0 total=299 Number of alignments=85 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1m5zA 25 :VTLYKDSGMEDFGFSVADGLL T0288 28 :CPCLYIVQVFDNTPAALDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDL Number of specific fragments extracted= 3 number of extra gaps= 0 total=302 Number of alignments=86 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1m5zA 26 :TLYKDSGMEDFGFSVADGLL T0288 28 :CPCLYIVQVFDNTPAALDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVI Number of specific fragments extracted= 3 number of extra gaps= 0 total=305 Number of alignments=87 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 2 :MVPGKVTLQKDAQ 1m5zA 19 :PVELHKVTLYKDS T0288 15 :NLIGISIGGGAQ 1m5zA 34 :EDFGFSVADGLL T0288 28 :CPCLYIVQVFDNTPAALDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=309 Number of alignments=88 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0288 2 :MVPGKVTLQKDAQ 1m5zA 20 :VELHKVTLYKDSG T0288 15 :NLIGISIGGGAQ 1m5zA 34 :EDFGFSVADGLL T0288 28 :CPCLYIVQVFDNTPAALDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISR Number of specific fragments extracted= 4 number of extra gaps= 0 total=313 Number of alignments=89 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1d5gA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1d5gA expands to /projects/compbio/data/pdb/1d5g.pdb.gz 1d5gA:# T0288 read from 1d5gA/merged-local-a2m # 1d5gA read from 1d5gA/merged-local-a2m # adding 1d5gA to template set # found chain 1d5gA in template set Warning: unaligning (T0288)A13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0288)Y27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)T28 Warning: unaligning (T0288)G79 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0288)E80 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0288 4 :PGKVTLQKD 1d5gA 6 :IFEVELAKN T0288 15 :N 1d5gA 17 :S T0288 17 :IGISIGGGA 1d5gA 18 :LGISVTGGV T0288 28 :CP 1d5gA 29 :SV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1d5gA 34 :GIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0288 81 :VTIHYNKLQYY 1d5gA 85 :VHLLLEKGQSP Number of specific fragments extracted= 6 number of extra gaps= 3 total=319 Number of alignments=90 # 1d5gA read from 1d5gA/merged-local-a2m # found chain 1d5gA in template set Warning: unaligning (T0288)A13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0288)Y27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)T28 Warning: unaligning (T0288)G79 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0288)E80 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0288 4 :PGKVTLQKD 1d5gA 6 :IFEVELAKN T0288 15 :N 1d5gA 17 :S T0288 17 :IGISIGGGA 1d5gA 18 :LGISVTGGV T0288 28 :CP 1d5gA 29 :SV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1d5gA 34 :GIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0288 81 :VTIHYNKL 1d5gA 85 :VHLLLEKG Number of specific fragments extracted= 6 number of extra gaps= 3 total=325 Number of alignments=91 # 1d5gA read from 1d5gA/merged-local-a2m # found chain 1d5gA in template set Warning: unaligning (T0288)A13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0288)Y27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)T28 Warning: unaligning (T0288)G79 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0288)E80 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0288 6 :KVTLQKD 1d5gA 8 :EVELAKN T0288 15 :N 1d5gA 17 :S T0288 17 :IGISIGGGA 1d5gA 18 :LGISVTGGV T0288 28 :CP 1d5gA 29 :SV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1d5gA 34 :GIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0288 81 :VTIH 1d5gA 85 :VHLL Number of specific fragments extracted= 6 number of extra gaps= 3 total=331 Number of alignments=92 # 1d5gA read from 1d5gA/merged-local-a2m # found chain 1d5gA in template set Warning: unaligning (T0288)A13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0288)Y27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)T28 Warning: unaligning (T0288)G79 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0288)E80 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0288 5 :GKVTLQKD 1d5gA 7 :FEVELAKN T0288 15 :N 1d5gA 17 :S T0288 17 :IGISIGGGA 1d5gA 18 :LGISVTGGV T0288 28 :CP 1d5gA 29 :SV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1d5gA 34 :GIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0288 81 :VTIHYNK 1d5gA 85 :VHLLLEK Number of specific fragments extracted= 6 number of extra gaps= 3 total=337 Number of alignments=93 # 1d5gA read from 1d5gA/merged-local-a2m # found chain 1d5gA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0288)G79 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0288)E80 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0288 1 :SMVPGKVTLQKDA 1d5gA 2 :KPGDIFEVELAKN T0288 16 :LIGISIGGGA 1d5gA 17 :SLGISVTGGV T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1d5gA 31 :RHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0288 81 :VTI 1d5gA 85 :VHL Number of specific fragments extracted= 4 number of extra gaps= 3 total=341 # 1d5gA read from 1d5gA/merged-local-a2m # found chain 1d5gA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0288)G79 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0288)E80 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0288 5 :GKVTLQKDA 1d5gA 6 :IFEVELAKN T0288 16 :LIGISIGGGA 1d5gA 17 :SLGISVTGGV T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1d5gA 31 :RHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0288 81 :VTIHY 1d5gA 85 :VHLLL Number of specific fragments extracted= 4 number of extra gaps= 3 total=345 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1qavA/merged-local-a2m # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 6 :KVTLQKDAQNLIGISIGGG 1qavA 81 :RVTVRKADAGGLGISIKGG T0288 26 :QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1qavA 101 :ENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=347 Number of alignments=94 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1qavA 82 :VTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVL Number of specific fragments extracted= 1 number of extra gaps= 0 total=348 Number of alignments=95 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1qavA 80 :RRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLE Number of specific fragments extracted= 1 number of extra gaps= 0 total=349 Number of alignments=96 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1qavA 82 :VTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVL Number of specific fragments extracted= 1 number of extra gaps= 0 total=350 Number of alignments=97 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1qavA 81 :RVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVL Number of specific fragments extracted= 1 number of extra gaps= 0 total=351 Number of alignments=98 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1qavA 76 :SLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 1 number of extra gaps= 0 total=352 Number of alignments=99 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1qavA 78 :QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 1 number of extra gaps= 0 total=353 Number of alignments=100 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1qavA 76 :SLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 1 number of extra gaps= 0 total=354 Number of alignments=101 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1qavA 76 :SLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 1 number of extra gaps= 0 total=355 Number of alignments=102 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1qavA 76 :SLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVL Number of specific fragments extracted= 1 number of extra gaps= 0 total=356 Number of alignments=103 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1qavA 78 :QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEV Number of specific fragments extracted= 1 number of extra gaps= 0 total=357 Number of alignments=104 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1qavA 76 :SLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 1 number of extra gaps= 0 total=358 Number of alignments=105 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1qavA 76 :SLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 1 number of extra gaps= 0 total=359 Number of alignments=106 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1qavA 82 :VTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVL Number of specific fragments extracted= 1 number of extra gaps= 0 total=360 Number of alignments=107 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1qavA 81 :RVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEV Number of specific fragments extracted= 1 number of extra gaps= 0 total=361 Number of alignments=108 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1qavA 76 :SLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 1 number of extra gaps= 0 total=362 Number of alignments=109 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1qavA 78 :QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 1 number of extra gaps= 0 total=363 Number of alignments=110 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavB/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1qavB expands to /projects/compbio/data/pdb/1qav.pdb.gz 1qavB:# T0288 read from 1qavB/merged-local-a2m # 1qavB read from 1qavB/merged-local-a2m # adding 1qavB to template set # found chain 1qavB in template set T0288 6 :KVTLQKDAQNLIGISIGGG 1qavB 1017 :SVRLFKRKVGGLGFLVKER T0288 26 :QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1qavB 1036 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA T0288 79 :GEVTIHY 1qavB 1091 :THVVLIL Number of specific fragments extracted= 3 number of extra gaps= 0 total=366 Number of alignments=111 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1qavB 1018 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTI 1qavB 1089 :SETHVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=369 Number of alignments=112 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1qavB 1017 :SVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1qavB 1089 :SETHVVL Number of specific fragments extracted= 3 number of extra gaps= 0 total=372 Number of alignments=113 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYC 1qavB 1015 :VISVRLFKRKVGGLGFLVKERVSKP T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qavB 1040 :PVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKLQYY 1qavB 1090 :ETHVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=375 Number of alignments=114 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1qavB 1015 :VISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKL 1qavB 1090 :ETHVVLILRGP Number of specific fragments extracted= 3 number of extra gaps= 0 total=378 Number of alignments=115 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYC 1qavB 1012 :QPNVISVRLFKRKVGGLGFLVKERVSKP T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qavB 1040 :PVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKLQYY 1qavB 1090 :ETHVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=381 Number of alignments=116 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQYC 1qavB 1013 :PNVISVRLFKRKVGGLGFLVKERVSKP T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qavB 1040 :PVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKLQYY 1qavB 1090 :ETHVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=384 Number of alignments=117 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1qavB 1018 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1qavB 1090 :ETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=387 Number of alignments=118 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1qavB 1016 :ISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1qavB 1090 :ETHVVLI T0288 85 :Y 1qavB 1100 :P Number of specific fragments extracted= 4 number of extra gaps= 0 total=391 Number of alignments=119 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1qavB 1013 :PNVISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1qavB 1090 :ETHVVLI T0288 87 :K 1qavB 1107 :L Number of specific fragments extracted= 4 number of extra gaps= 0 total=395 Number of alignments=120 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1qavB 1013 :PNVISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1qavB 1090 :ETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=398 Number of alignments=121 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1qavB 1018 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV Number of specific fragments extracted= 2 number of extra gaps= 0 total=400 Number of alignments=122 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1qavB 1017 :SVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVL Number of specific fragments extracted= 2 number of extra gaps= 0 total=402 Number of alignments=123 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1qavB 1013 :PNVISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS T0288 80 :EVTIHYNKLQY 1qavB 1092 :HVVLILRGPEG Number of specific fragments extracted= 3 number of extra gaps= 0 total=405 Number of alignments=124 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1qavB 1013 :PNVISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASE T0288 81 :VTIHYNKLQY 1qavB 1093 :VVLILRGPEG Number of specific fragments extracted= 3 number of extra gaps= 0 total=408 Number of alignments=125 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1pdr/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1pdr expands to /projects/compbio/data/pdb/1pdr.pdb.gz 1pdr:Warning: there is no chain 1pdr will retry with 1pdrA # T0288 read from 1pdr/merged-local-a2m # 1pdr read from 1pdr/merged-local-a2m # adding 1pdr to template set # found chain 1pdr in template set T0288 4 :PGKVTLQK 1pdr 464 :PRKVVLHR T0288 13 :AQNLIGISIGGGAQ 1pdr 472 :GSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVA Number of specific fragments extracted= 3 number of extra gaps= 0 total=411 Number of alignments=126 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 7 :VTLQKDA 1pdr 467 :VVLHRGS T0288 15 :NLIGISIGGGAQ 1pdr 474 :TGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=414 Number of alignments=127 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 5 :GKVTLQKDA 1pdr 465 :RKVVLHRGS T0288 15 :NLIGISIGGGAQ 1pdr 474 :TGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=417 Number of alignments=128 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 3 :VPGKVTLQKDAQN 1pdr 463 :EPRKVVLHRGSTG T0288 17 :IGISIGGGAQYC 1pdr 476 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1pdr 488 :GIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=420 Number of alignments=129 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 3 :VPGKVTLQKDAQN 1pdr 463 :EPRKVVLHRGSTG T0288 17 :IGISIGGGAQYC 1pdr 476 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1pdr 488 :GIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 3 number of extra gaps= 0 total=423 Number of alignments=130 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 1 :SMVPGKVTLQKDAQN 1pdr 461 :TREPRKVVLHRGSTG T0288 17 :IGISIGGGAQYC 1pdr 476 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1pdr 488 :GIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 3 number of extra gaps= 0 total=426 Number of alignments=131 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 2 :MVPGKVTLQKDAQN 1pdr 462 :REPRKVVLHRGSTG T0288 17 :IGISIGGGAQYC 1pdr 476 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1pdr 488 :GIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 3 number of extra gaps= 0 total=429 Number of alignments=132 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 4 :PGKVTLQKDAQN 1pdr 464 :PRKVVLHRGSTG T0288 17 :IGISIGGGAQ 1pdr 476 :LGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIV Number of specific fragments extracted= 3 number of extra gaps= 0 total=432 Number of alignments=133 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 3 :VPGKVTLQKDAQN 1pdr 463 :EPRKVVLHRGSTG T0288 17 :IGISIGGGAQ 1pdr 476 :LGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIV T0288 85 :YN 1pdr 547 :PE Number of specific fragments extracted= 4 number of extra gaps= 0 total=436 Number of alignments=134 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 1 :SMVPGKVTLQKDAQN 1pdr 461 :TREPRKVVLHRGSTG T0288 17 :IGISIGGGAQ 1pdr 476 :LGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIV T0288 85 :YNKLQ 1pdr 545 :YRPEE Number of specific fragments extracted= 4 number of extra gaps= 0 total=440 Number of alignments=135 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 2 :MVPGKVTLQKDAQN 1pdr 462 :REPRKVVLHRGSTG T0288 17 :IGISIGGGAQ 1pdr 476 :LGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIV T0288 85 :YNK 1pdr 545 :YRP Number of specific fragments extracted= 4 number of extra gaps= 0 total=444 Number of alignments=136 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 8 :TLQKDAQNLIGISIGGGAQ 1pdr 467 :VVLHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTI Number of specific fragments extracted= 2 number of extra gaps= 0 total=446 Number of alignments=137 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1pdr 465 :RKVVLHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVA Number of specific fragments extracted= 2 number of extra gaps= 0 total=448 Number of alignments=138 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1pdr 461 :TREPRKVVLHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=450 Number of alignments=139 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1pdr 461 :TREPRKVVLHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=452 Number of alignments=140 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1fc6A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1fc6A/merged-local-a2m # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALD 1fc6A 163 :VGLEITYDGGSGKDVVVLTPAPGGPAEKA T0288 47 :TVAAGDEITGVNGRSIKGKTKVEVAKMIQE 1fc6A 192 :GARAGDVIVTVDGTAVKGMSLYDVSDLLQG Number of specific fragments extracted= 2 number of extra gaps= 0 total=454 Number of alignments=141 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1fc6A 155 :GTAGSVTGVGLEITYDGGSG T0288 29 :PCLYIVQVFDNTPAALDG 1fc6A 175 :KDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0288 78 :KGEVTI 1fc6A 224 :DSQVEV Number of specific fragments extracted= 4 number of extra gaps= 0 total=458 Number of alignments=142 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1fc6A 154 :RGTAGSVTGVGLEITYDGGSG T0288 29 :PCLYIVQVFDNTPAALDG 1fc6A 175 :KDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0288 78 :KGEVTI 1fc6A 224 :DSQVEV Number of specific fragments extracted= 4 number of extra gaps= 0 total=462 Number of alignments=143 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 6 :KVTLQKDAQN 1fc6A 153 :RRGTAGSVTG T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 163 :VGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQ 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQ T0288 76 :EVKGEVTI 1fc6A 222 :EADSQVEV Number of specific fragments extracted= 4 number of extra gaps= 0 total=466 Number of alignments=144 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 6 :KVTLQKDAQN 1fc6A 153 :RRGTAGSVTG T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 163 :VGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQ 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQ T0288 76 :EVKGEVTIH 1fc6A 222 :EADSQVEVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=470 Number of alignments=145 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 163 :VGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQE 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQG T0288 77 :VKGEVTI 1fc6A 223 :ADSQVEV Number of specific fragments extracted= 3 number of extra gaps= 0 total=473 Number of alignments=146 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 11 :KDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 157 :AGSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQE 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQG T0288 77 :VKGEVTI 1fc6A 223 :ADSQVEV Number of specific fragments extracted= 3 number of extra gaps= 0 total=476 Number of alignments=147 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 16 :LIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 162 :GVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQE 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQG Number of specific fragments extracted= 2 number of extra gaps= 0 total=478 Number of alignments=148 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 14 :QNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 160 :VTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0288 78 :KGEVTIHY 1fc6A 224 :DSQVEVVL Number of specific fragments extracted= 3 number of extra gaps= 0 total=481 Number of alignments=149 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 12 :DAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 158 :GSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMI 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0288 75 :QEVKGEVTIHYNKLQYY 1fc6A 221 :GEADSQVEVVLHAPGAP Number of specific fragments extracted= 3 number of extra gaps= 0 total=484 Number of alignments=150 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 15 :NLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 161 :TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMI 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0288 77 :VKGEVTIHYNKLQY 1fc6A 223 :ADSQVEVVLHAPGA Number of specific fragments extracted= 3 number of extra gaps= 0 total=487 Number of alignments=151 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 16 :LIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 162 :GVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQE 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQG Number of specific fragments extracted= 2 number of extra gaps= 0 total=489 Number of alignments=152 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 159 :SVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0288 78 :KGEVTI 1fc6A 224 :DSQVEV Number of specific fragments extracted= 3 number of extra gaps= 0 total=492 Number of alignments=153 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 12 :DAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 158 :GSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMI 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0288 75 :QEVKGEVTIH 1fc6A 221 :GEADSQVEVV T0288 85 :YNKL 1fc6A 237 :PSNT Number of specific fragments extracted= 4 number of extra gaps= 0 total=496 Number of alignments=154 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 15 :NLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 161 :TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMI 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0288 77 :VKGEVTIH 1fc6A 223 :ADSQVEVV T0288 85 :YNKLQY 1fc6A 237 :PSNTRT Number of specific fragments extracted= 4 number of extra gaps= 0 total=500 Number of alignments=155 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 16 :LIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 162 :GVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVE Number of specific fragments extracted= 2 number of extra gaps= 0 total=502 Number of alignments=156 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 14 :QNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 160 :VTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=504 Number of alignments=157 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 12 :DAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 158 :GSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQE 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQG T0288 77 :VKGEVTIHYNKLQYYK 1fc6A 223 :ADSQVEVVLHAPGAPS Number of specific fragments extracted= 3 number of extra gaps= 0 total=507 Number of alignments=158 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1fc6A 159 :SVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMI 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0288 77 :VKGEVTIHYNKLQY 1fc6A 223 :ADSQVEVVLHAPGA Number of specific fragments extracted= 3 number of extra gaps= 0 total=510 Number of alignments=159 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n7eA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1n7eA expands to /projects/compbio/data/pdb/1n7e.pdb.gz 1n7eA:# T0288 read from 1n7eA/merged-local-a2m # 1n7eA read from 1n7eA/merged-local-a2m # adding 1n7eA to template set # found chain 1n7eA in template set T0288 1 :SMVPGKVTLQKDAQN 1n7eA 667 :GAIIYTVELKRYGGP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1n7eA 682 :LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTL Number of specific fragments extracted= 2 number of extra gaps= 0 total=512 Number of alignments=160 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 4 :PGKVTLQKDAQN 1n7eA 670 :IYTVELKRYGGP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n7eA 682 :LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLK Number of specific fragments extracted= 2 number of extra gaps= 0 total=514 Number of alignments=161 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1n7eA 672 :TVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTL Number of specific fragments extracted= 1 number of extra gaps= 0 total=515 Number of alignments=162 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1n7eA 671 :YTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTL Number of specific fragments extracted= 1 number of extra gaps= 0 total=516 Number of alignments=163 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 1 :SMVPGKVTLQKDAQN 1n7eA 667 :GAIIYTVELKRYGGP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1n7eA 682 :LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD Number of specific fragments extracted= 2 number of extra gaps= 0 total=518 Number of alignments=164 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 3 :VPGKVTLQKDAQ 1n7eA 669 :IIYTVELKRYGG T0288 16 :LIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1n7eA 681 :PLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=520 Number of alignments=165 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 1 :SMVPGKVTLQK 1n7eA 667 :GAIIYTVELKR T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1n7eA 678 :YGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQP Number of specific fragments extracted= 2 number of extra gaps= 0 total=522 Number of alignments=166 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 1 :SMVPGKVTLQKDAQN 1n7eA 667 :GAIIYTVELKRYGGP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1n7eA 682 :LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQP Number of specific fragments extracted= 2 number of extra gaps= 0 total=524 Number of alignments=167 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 1 :SMVPGKVTLQKDAQN 1n7eA 667 :GAIIYTVELKRYGGP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n7eA 682 :LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLK Number of specific fragments extracted= 2 number of extra gaps= 0 total=526 Number of alignments=168 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 4 :PGKVTLQKDA 1n7eA 670 :IYTVELKRYG T0288 15 :NLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n7eA 680 :GPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLK Number of specific fragments extracted= 2 number of extra gaps= 0 total=528 Number of alignments=169 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 1 :SMVPGKVTLQK 1n7eA 667 :GAIIYTVELKR T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n7eA 678 :YGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLK T0288 85 :YNKLQY 1n7eA 754 :TDAQPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=531 Number of alignments=170 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 1 :SMVPGKVTLQKDAQN 1n7eA 667 :GAIIYTVELKRYGGP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n7eA 682 :LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLK T0288 87 :KL 1n7eA 756 :AQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=534 Number of alignments=171 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1n7eA 670 :IYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTL Number of specific fragments extracted= 1 number of extra gaps= 0 total=535 Number of alignments=172 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1n7eA 670 :IYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKI Number of specific fragments extracted= 1 number of extra gaps= 0 total=536 Number of alignments=173 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (1n7eA)G667 T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQP Number of specific fragments extracted= 1 number of extra gaps= 0 total=537 Number of alignments=174 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQP Number of specific fragments extracted= 1 number of extra gaps= 0 total=538 Number of alignments=175 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1nf3C/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1nf3C expands to /projects/compbio/data/pdb/1nf3.pdb.gz 1nf3C:# T0288 read from 1nf3C/merged-local-a2m # 1nf3C read from 1nf3C/merged-local-a2m # adding 1nf3C to template set # found chain 1nf3C in template set T0288 17 :IGISIGGGAQYCP 1nf3C 179 :VRVTPHGLEKVPG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1nf3C 192 :IFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLII Number of specific fragments extracted= 2 number of extra gaps= 0 total=540 Number of alignments=176 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 14 :QNLIGISIGGGAQ 1nf3C 166 :EKPLGFYIRDGSS T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1nf3C 188 :KVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIIT Number of specific fragments extracted= 2 number of extra gaps= 0 total=542 Number of alignments=177 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 7 :VTLQK 1nf3C 158 :VRLCK T0288 12 :DAQNLIGISIGGGAQ 1nf3C 164 :GTEKPLGFYIRDGSS T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1nf3C 188 :KVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLII Number of specific fragments extracted= 3 number of extra gaps= 0 total=545 Number of alignments=178 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 5 :GKVTLQK 1nf3C 156 :RRVRLCK T0288 12 :DAQNLIGISIGGGAQ 1nf3C 164 :GTEKPLGFYIRDGSS T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1nf3C 188 :KVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLII Number of specific fragments extracted= 3 number of extra gaps= 0 total=548 Number of alignments=179 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 5 :GKVTLQK 1nf3C 156 :RRVRLCK T0288 12 :DAQNLIGISIGGGAQYCP 1nf3C 164 :GTEKPLGFYIRDGSSVRV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRP Number of specific fragments extracted= 3 number of extra gaps= 0 total=551 Number of alignments=180 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 5 :GKVTLQK 1nf3C 156 :RRVRLCK T0288 12 :DAQNLIGISIGGGAQYCP 1nf3C 164 :GTEKPLGFYIRDGSSVRV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=554 Number of alignments=181 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0288)K92 because last residue in template chain is (1nf3C)N253 T0288 4 :P 1nf3C 152 :P T0288 5 :GKVTLQK 1nf3C 156 :RRVRLCK T0288 12 :DAQNLIGISIGGGAQYCP 1nf3C 164 :GTEKPLGFYIRDGSSVRV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 4 number of extra gaps= 0 total=558 Number of alignments=182 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0288)K92 because last residue in template chain is (1nf3C)N253 T0288 2 :MVPGKVTLQK 1nf3C 153 :ETHRRVRLCK T0288 12 :DAQNLIGISIGGGAQYCP 1nf3C 164 :GTEKPLGFYIRDGSSVRV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=561 Number of alignments=183 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 5 :GKVTLQK 1nf3C 156 :RRVRLCK T0288 12 :DAQNLIGISIGGGAQYCP 1nf3C 164 :GTEKPLGFYIRDGSSVRV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIIT Number of specific fragments extracted= 3 number of extra gaps= 0 total=564 Number of alignments=184 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 5 :GKVTLQK 1nf3C 156 :RRVRLCK T0288 12 :DAQNLIGISIGGGAQYCP 1nf3C 164 :GTEKPLGFYIRDGSSVRV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIIT Number of specific fragments extracted= 3 number of extra gaps= 0 total=567 Number of alignments=185 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 4 :P 1nf3C 152 :P T0288 5 :GKVTLQK 1nf3C 156 :RRVRLCK T0288 12 :DAQNLIGISIGGGAQYCP 1nf3C 164 :GTEKPLGFYIRDGSSVRV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIIT T0288 85 :YNK 1nf3C 248 :PAN Number of specific fragments extracted= 5 number of extra gaps= 0 total=572 Number of alignments=186 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 2 :MVPGKVTLQK 1nf3C 153 :ETHRRVRLCK T0288 12 :DAQNLIGISIGGGAQYCP 1nf3C 164 :GTEKPLGFYIRDGSSVRV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIIT T0288 85 :YNK 1nf3C 249 :ANQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=576 Number of alignments=187 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 8 :TLQKDAQNLIGISIGGGAQ 1nf3C 160 :LCKYGTEKPLGFYIRDGSS T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1nf3C 188 :KVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLII Number of specific fragments extracted= 2 number of extra gaps= 0 total=578 Number of alignments=188 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0288 8 :TLQKDAQNLIGISIGGGAQ 1nf3C 160 :LCKYGTEKPLGFYIRDGSS T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1nf3C 188 :KVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITV Number of specific fragments extracted= 2 number of extra gaps= 0 total=580 Number of alignments=189 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0288)K92 because last residue in template chain is (1nf3C)N253 T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1nf3C 155 :HRRVRLCKYGTEKPLGFYIRDGSS T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1nf3C 188 :KVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=582 Number of alignments=190 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0288)K92 because last residue in template chain is (1nf3C)N253 T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1nf3C 155 :HRRVRLCKYGTEKPLGFYIRDGSS T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1nf3C 188 :KVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=584 Number of alignments=191 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1r6jA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1r6jA/merged-local-a2m # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 7 :VTLQKDAQNLIGISIGGG 1r6jA 199 :ITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1r6jA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=587 Number of alignments=192 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 5 :GKVTLQKDAQNLIGISIGGG 1r6jA 197 :RTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1r6jA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT Number of specific fragments extracted= 3 number of extra gaps= 0 total=590 Number of alignments=193 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 7 :VTLQKDAQNLIGISIGGG 1r6jA 199 :ITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1r6jA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=593 Number of alignments=194 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 5 :GKVTLQKDAQNLIGISIGGG 1r6jA 197 :RTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1r6jA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT Number of specific fragments extracted= 3 number of extra gaps= 0 total=596 Number of alignments=195 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 7 :VTLQKDAQNLIGISIGG 1r6jA 199 :ITMHKDSTGHVGFIFKN T0288 31 :LYIVQVFDNTPAALDG 1r6jA 216 :GKITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=599 Number of alignments=196 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 6 :KVTLQKDAQNLIGISIGG 1r6jA 198 :TITMHKDSTGHVGFIFKN T0288 31 :LYIVQVFDNTPAALDG 1r6jA 216 :GKITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=602 Number of alignments=197 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGA 1r6jA 194 :MDPRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1r6jA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=605 Number of alignments=198 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 3 :VPGKVTLQKDAQNLIGISIGGGA 1r6jA 195 :DPRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1r6jA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=608 Number of alignments=199 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set Warning: unaligning (T0288)Q89 because last residue in template chain is (1r6jA)F273 T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGA 1r6jA 193 :AMDPRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1r6jA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=611 Number of alignments=200 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGG 1r6jA 193 :AMDPRTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1r6jA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=614 Number of alignments=201 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGA 1r6jA 196 :PRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1r6jA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT Number of specific fragments extracted= 3 number of extra gaps= 0 total=617 Number of alignments=202 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 3 :VPGKVTLQKDAQNLIGISIGGGA 1r6jA 195 :DPRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1r6jA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT Number of specific fragments extracted= 3 number of extra gaps= 0 total=620 Number of alignments=203 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGA 1r6jA 194 :MDPRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1r6jA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT T0288 85 :YN 1r6jA 271 :PA Number of specific fragments extracted= 4 number of extra gaps= 0 total=624 Number of alignments=204 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGG 1r6jA 193 :AMDPRTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1r6jA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT Number of specific fragments extracted= 3 number of extra gaps= 0 total=627 Number of alignments=205 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGA 1r6jA 193 :AMDPRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1r6jA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=630 Number of alignments=206 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 5 :GKVTLQKDAQNLIGISIGGGA 1r6jA 197 :RTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1r6jA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITI Number of specific fragments extracted= 3 number of extra gaps= 0 total=633 Number of alignments=207 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGG 1r6jA 193 :AMDPRTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1r6jA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=636 Number of alignments=208 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0288 2 :MVPGKVTLQKDAQNLIGISIGGG 1r6jA 194 :MDPRTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1r6jA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=639 Number of alignments=209 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zokA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1zokA/merged-local-a2m # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1zokA)E221 Warning: unaligning (T0288)Y91 because last residue in template chain is (1zokA)F313 T0288 4 :PGKVTLQKDAQN 1zokA 222 :YEEITLERGNSG T0288 17 :IGISIGGGAQYCP 1zokA 234 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1zokA 252 :SIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRRKA Number of specific fragments extracted= 3 number of extra gaps= 0 total=642 Number of alignments=210 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set T0288 5 :GKVTLQKDAQN 1zokA 223 :EEITLERGNSG T0288 17 :IGISIGGGAQYCP 1zokA 234 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1zokA 252 :SIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=645 Number of alignments=211 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set T0288 4 :PGKVTLQKDAQN 1zokA 222 :YEEITLERGNSG T0288 17 :IGISIGGGAQYCP 1zokA 234 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1zokA 252 :SIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLY Number of specific fragments extracted= 3 number of extra gaps= 0 total=648 Number of alignments=212 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set T0288 5 :GKVTLQKDAQN 1zokA 223 :EEITLERGNSG T0288 17 :IGISIGGGAQYCP 1zokA 234 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1zokA 252 :SIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYV Number of specific fragments extracted= 3 number of extra gaps= 0 total=651 Number of alignments=213 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1zokA)E221 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1zokA 222 :YEEITLERGNSGLGFSIAGGTD T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1zokA 249 :DDSSIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRL Number of specific fragments extracted= 2 number of extra gaps= 0 total=653 Number of alignments=214 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1zokA 223 :EEITLERGNSGLGFSIAGGTD T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1zokA 249 :DDSSIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYV Number of specific fragments extracted= 2 number of extra gaps= 0 total=655 Number of alignments=215 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1rgrA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1rgrA expands to /projects/compbio/data/pdb/1rgr.pdb.gz 1rgrA:# T0288 read from 1rgrA/merged-local-a2m # 1rgrA read from 1rgrA/merged-local-a2m # adding 1rgrA to template set # found chain 1rgrA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1rgrA)E62 Warning: unaligning (T0288)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0288)G22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0288)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)H87 Warning: unaligning (T0288)P29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)H87 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0288)K65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 Warning: unaligning (T0288)Y91 because last residue in template chain is (1rgrA)P154 T0288 4 :PGKVTLQKDAQN 1rgrA 63 :YEEITLERGNSG T0288 17 :IGIS 1rgrA 75 :LGFS T0288 24 :GAQY 1rgrA 82 :GTDN T0288 30 :CLYIVQVFDNTPAALDGT 1rgrA 93 :SIFITKIIPGGAAAQDGR T0288 50 :AGDEITGVNGRSIKG 1rgrA 113 :VNDSILFVNEVDVRE T0288 67 :KVEVAKMIQEVKGEVTIHYNKLQY 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 6 number of extra gaps= 4 total=661 Number of alignments=216 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0288)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0288)G22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0288)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)H87 Warning: unaligning (T0288)P29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)H87 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0288)K65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0288 5 :GKVTLQKDAQN 1rgrA 64 :EEITLERGNSG T0288 17 :IGIS 1rgrA 75 :LGFS T0288 24 :GAQY 1rgrA 82 :GTDN T0288 30 :CLYIVQVFDNTPAALDGT 1rgrA 93 :SIFITKIIPGGAAAQDGR T0288 50 :AGDEITGVNGRSIKG 1rgrA 113 :VNDSILFVNEVDVRE T0288 67 :KVEVAKMIQEVKGEVTIHYNKL 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRR Number of specific fragments extracted= 6 number of extra gaps= 4 total=667 Number of alignments=217 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0288)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0288)G22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0288)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)H87 Warning: unaligning (T0288)P29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)H87 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0288)K65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0288 4 :PGKVTLQKDAQN 1rgrA 63 :YEEITLERGNSG T0288 17 :IGIS 1rgrA 75 :LGFS T0288 24 :GAQY 1rgrA 82 :GTDN T0288 30 :CLYIVQVFDNTPAALDGT 1rgrA 93 :SIFITKIIPGGAAAQDGR T0288 50 :AGDEITGVNGRSIKG 1rgrA 113 :VNDSILFVNEVDVRE T0288 67 :KVEVAKMIQEVKGEVTIH 1rgrA 130 :HSAAVEALKEAGSIVRLY Number of specific fragments extracted= 6 number of extra gaps= 4 total=673 Number of alignments=218 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0288)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0288)G22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0288)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)H87 Warning: unaligning (T0288)P29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)H87 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0288)K65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0288 5 :GKVTLQKDAQN 1rgrA 64 :EEITLERGNSG T0288 17 :IGIS 1rgrA 75 :LGFS T0288 24 :GAQY 1rgrA 82 :GTDN T0288 30 :CLYIVQVFDNTPAALDGT 1rgrA 93 :SIFITKIIPGGAAAQDGR T0288 50 :AGDEITGVNGRSIKG 1rgrA 113 :VNDSILFVNEVDVRE T0288 67 :KVEVAKMIQEVKGEVTIH 1rgrA 130 :HSAAVEALKEAGSIVRLY Number of specific fragments extracted= 6 number of extra gaps= 4 total=679 Number of alignments=219 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1rgrA)E62 Warning: unaligning (T0288)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0288)G22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0288)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0288)K65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0288 5 :GKVTLQKDAQNLIGIS 1rgrA 63 :YEEITLERGNSGLGFS T0288 24 :GAQ 1rgrA 82 :GTD T0288 27 :YCPCLYIVQVFDNTPAALDGT 1rgrA 90 :DDPSIFITKIIPGGAAAQDGR T0288 50 :AGDEITGVNGRSIKG 1rgrA 113 :VNDSILFVNEVDVRE T0288 67 :KVEVAKMIQEVKGEVTI 1rgrA 130 :HSAAVEALKEAGSIVRL Number of specific fragments extracted= 5 number of extra gaps= 3 total=684 Number of alignments=220 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0288)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0288)G22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0288)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0288)K65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0288 6 :KVTLQKDAQNLIGIS 1rgrA 64 :EEITLERGNSGLGFS T0288 24 :GAQ 1rgrA 82 :GTD T0288 27 :YCPCLYIVQVFDNTPAALDGT 1rgrA 90 :DDPSIFITKIIPGGAAAQDGR T0288 50 :AGDEITGVNGRSIKG 1rgrA 113 :VNDSILFVNEVDVRE T0288 67 :KVEVAKMIQEVKGEVTIHY 1rgrA 130 :HSAAVEALKEAGSIVRLYV Number of specific fragments extracted= 5 number of extra gaps= 3 total=689 Number of alignments=221 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2fe5A/merged-local-a2m # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 7 :VTLQKDAQN 2fe5A 227 :VNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYL Number of specific fragments extracted= 3 number of extra gaps= 0 total=692 Number of alignments=222 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 6 :KVTLQKDAQN 2fe5A 226 :EVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLK Number of specific fragments extracted= 3 number of extra gaps= 0 total=695 Number of alignments=223 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 7 :VTLQKDAQNLIGISIGGGAQ 2fe5A 226 :EVNLLKGPKGLGFSIAGGIG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYL Number of specific fragments extracted= 2 number of extra gaps= 0 total=697 Number of alignments=224 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 2fe5A 225 :MEVNLLKGPKGLGFSIAGGIG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYL Number of specific fragments extracted= 2 number of extra gaps= 0 total=699 Number of alignments=225 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 1 :SMVPGKVTLQKDAQN 2fe5A 221 :SMTIMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=702 Number of alignments=226 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 3 :VPGKVTLQKDAQN 2fe5A 223 :TIMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=705 Number of alignments=227 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0288)Y90 because last residue in template chain is (2fe5A)S314 T0288 1 :SMVPGKVTLQKDAQN 2fe5A 221 :SMTIMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=708 Number of alignments=228 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 1 :SMVPGKVTLQKDAQN 2fe5A 221 :SMTIMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=711 Number of alignments=229 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 1 :SMVPGKVTLQKDAQN 2fe5A 221 :SMTIMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLK Number of specific fragments extracted= 3 number of extra gaps= 0 total=714 Number of alignments=230 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 4 :PGKVTLQKDAQN 2fe5A 224 :IMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLK Number of specific fragments extracted= 3 number of extra gaps= 0 total=717 Number of alignments=231 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 1 :SMVPGKVTLQKDAQN 2fe5A 221 :SMTIMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLK T0288 85 :YN 2fe5A 312 :PG Number of specific fragments extracted= 4 number of extra gaps= 0 total=721 Number of alignments=232 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 1 :SMVPGKVTLQKDAQN 2fe5A 221 :SMTIMEVNLLKGPKG T0288 17 :IGISIGGGAQYCP 2fe5A 236 :LGFSIAGGIGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLK Number of specific fragments extracted= 3 number of extra gaps= 0 total=724 Number of alignments=233 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYL Number of specific fragments extracted= 2 number of extra gaps= 0 total=726 Number of alignments=234 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKV Number of specific fragments extracted= 2 number of extra gaps= 0 total=728 Number of alignments=235 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=730 Number of alignments=236 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=732 Number of alignments=237 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1wf7A/merged-local-a2m # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 7 :VTLQKD 1wf7A 9 :VSLVGP T0288 15 :NLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 15 :APWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNM Number of specific fragments extracted= 3 number of extra gaps= 0 total=735 Number of alignments=238 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 6 :KVTLQKD 1wf7A 8 :SVSLVGP T0288 15 :NLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 15 :APWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMT Number of specific fragments extracted= 3 number of extra gaps= 0 total=738 Number of alignments=239 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNM Number of specific fragments extracted= 2 number of extra gaps= 0 total=740 Number of alignments=240 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNM Number of specific fragments extracted= 2 number of extra gaps= 0 total=742 Number of alignments=241 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=744 Number of alignments=242 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRA Number of specific fragments extracted= 2 number of extra gaps= 0 total=746 Number of alignments=243 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 1 :SMVPGKVTLQ 1wf7A 3 :SGSSGSVSLV T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA Number of specific fragments extracted= 3 number of extra gaps= 0 total=749 Number of alignments=244 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 2 :MVPGKVTLQ 1wf7A 4 :GSSGSVSLV T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA Number of specific fragments extracted= 3 number of extra gaps= 0 total=752 Number of alignments=245 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMT Number of specific fragments extracted= 2 number of extra gaps= 0 total=754 Number of alignments=246 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMT Number of specific fragments extracted= 2 number of extra gaps= 0 total=756 Number of alignments=247 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 1 :SMVPGKVTLQ 1wf7A 3 :SGSSGSVSLV T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMT T0288 90 :YY 1wf7A 92 :KS Number of specific fragments extracted= 4 number of extra gaps= 0 total=760 Number of alignments=248 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 1 :SMVPGKVTLQ 1wf7A 3 :SGSSGSVSLV T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMT Number of specific fragments extracted= 3 number of extra gaps= 0 total=763 Number of alignments=249 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNM Number of specific fragments extracted= 2 number of extra gaps= 0 total=765 Number of alignments=250 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 13 :GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTL Number of specific fragments extracted= 2 number of extra gaps= 0 total=767 Number of alignments=251 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 2 :SSGSSGSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAAK Number of specific fragments extracted= 2 number of extra gaps= 0 total=769 Number of alignments=252 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0288 7 :VTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1wf7A 7 :GSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA Number of specific fragments extracted= 2 number of extra gaps= 0 total=771 Number of alignments=253 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1i16/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1i16/merged-local-a2m # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 4 :PGKVTLQKDAQNL 1i16 30 :VCTVTLEKMSAGL T0288 18 :GISIGGGAQ 1i16 43 :GFSLEGGKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALP T0288 79 :GEVTIH 1i16 108 :GPVTIV Number of specific fragments extracted= 4 number of extra gaps= 0 total=775 Number of alignments=254 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 7 :VTLQKDA 1i16 33 :VTLEKMS T0288 15 :NLIGISIGGGAQY 1i16 40 :AGLGFSLEGGKGS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 1i16 56 :DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG T0288 81 :VTI 1i16 110 :VTI Number of specific fragments extracted= 4 number of extra gaps= 0 total=779 Number of alignments=255 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 6 :KVTLQKDA 1i16 32 :TVTLEKMS T0288 15 :NLIGISIGGGAQY 1i16 40 :AGLGFSLEGGKGS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 1i16 56 :DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG T0288 81 :VTI 1i16 110 :VTI Number of specific fragments extracted= 4 number of extra gaps= 0 total=783 Number of alignments=256 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 1 :SMVPGKVTLQKDAQN 1i16 27 :EATVCTVTLEKMSAG T0288 17 :IGISIGGGAQYCP 1i16 42 :LGFSLEGGKGSLH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i16 58 :PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0288 78 :KGEVTIHYNKL 1i16 107 :DGPVTIVIRRK Number of specific fragments extracted= 4 number of extra gaps= 0 total=787 Number of alignments=257 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 4 :PGKVTLQKDAQN 1i16 30 :VCTVTLEKMSAG T0288 17 :IGISIGGGAQYCP 1i16 42 :LGFSLEGGKGSLH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i16 58 :PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0288 78 :KGEVTIHYNKL 1i16 107 :DGPVTIVIRRK Number of specific fragments extracted= 4 number of extra gaps= 0 total=791 Number of alignments=258 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 1 :SMVPGKVTLQKDAQN 1i16 27 :EATVCTVTLEKMSAG T0288 17 :IGISIGGGAQYCP 1i16 42 :LGFSLEGGKGSLH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i16 58 :PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0288 78 :KGEVTIHYNKLQYYKV 1i16 107 :DGPVTIVIRRKSLQSK Number of specific fragments extracted= 4 number of extra gaps= 0 total=795 Number of alignments=259 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 2 :MVPGKVTLQKDAQN 1i16 28 :ATVCTVTLEKMSAG T0288 17 :IGISIGGGAQYCP 1i16 42 :LGFSLEGGKGSLH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i16 58 :PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0288 78 :KGEVTIHYNKLQYY 1i16 107 :DGPVTIVIRRKSLQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=799 Number of alignments=260 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 1 :SMVPGKVTLQKDAQN 1i16 27 :EATVCTVTLEKMSAG T0288 17 :IGISIGGGAQYCP 1i16 42 :LGFSLEGGKGSLH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i16 58 :PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0288 78 :KGEVTIH 1i16 107 :DGPVTIV Number of specific fragments extracted= 4 number of extra gaps= 0 total=803 Number of alignments=261 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 4 :PGKVTLQKDAQN 1i16 30 :VCTVTLEKMSAG T0288 17 :IGISIGGGAQYCP 1i16 42 :LGFSLEGGKGSLH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i16 58 :PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0288 78 :KGEVTIH 1i16 107 :DGPVTIV Number of specific fragments extracted= 4 number of extra gaps= 0 total=807 Number of alignments=262 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 1 :SMVPGKVTLQKDAQN 1i16 27 :EATVCTVTLEKMSAG T0288 17 :IGISIGGGAQYCP 1i16 42 :LGFSLEGGKGSLH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i16 58 :PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0288 78 :KGEVTIH 1i16 107 :DGPVTIV T0288 87 :KLQYYK 1i16 117 :KSLQSK Number of specific fragments extracted= 5 number of extra gaps= 0 total=812 Number of alignments=263 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 2 :MVPGKVTLQKDAQN 1i16 28 :ATVCTVTLEKMSAG T0288 17 :IGISIGGGAQYCP 1i16 42 :LGFSLEGGKGSLH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i16 58 :PLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0288 78 :KGEVTIH 1i16 107 :DGPVTIV T0288 85 :YNKLQYYK 1i16 115 :RRKSLQSK Number of specific fragments extracted= 5 number of extra gaps= 0 total=817 Number of alignments=264 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1i16 30 :VCTVTLEKMSAGLGFSLEGGKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVT Number of specific fragments extracted= 2 number of extra gaps= 0 total=819 Number of alignments=265 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1i16 30 :VCTVTLEKMSAGLGFSLEGGKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIV Number of specific fragments extracted= 2 number of extra gaps= 0 total=821 Number of alignments=266 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1i16 27 :EATVCTVTLEKMSAGLGFSLEGGKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKSLQS Number of specific fragments extracted= 2 number of extra gaps= 0 total=823 Number of alignments=267 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG T0288 81 :VTIHY 1i16 110 :VTIVI T0288 87 :KLQYYK 1i16 115 :RRKSLQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=827 Number of alignments=268 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ihjA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1ihjA/merged-local-a2m # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 T0288 1 :SMVPGKVTLQKDAQNLIGISIGGG 1ihjA 12 :GELIHMVTLDKTGKKSFGICIVRG T0288 25 :AQ 1ihjA 38 :KD T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1ihjA 45 :TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELE Number of specific fragments extracted= 3 number of extra gaps= 1 total=830 Number of alignments=269 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 T0288 4 :PGKVTLQKDAQNLIGISIGGG 1ihjA 15 :IHMVTLDKTGKKSFGICIVRG T0288 25 :AQ 1ihjA 38 :KD T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1ihjA 45 :TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELE Number of specific fragments extracted= 3 number of extra gaps= 1 total=833 Number of alignments=270 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)P29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 T0288 7 :VTLQKDAQNLIGISIGGGAQYC 1ihjA 18 :VTLDKTGKKSFGICIVRGEVKD T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIEL Number of specific fragments extracted= 2 number of extra gaps= 1 total=835 Number of alignments=271 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)P29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 T0288 6 :KVTLQKDAQNLIGISIGGGAQYC 1ihjA 17 :MVTLDKTGKKSFGICIVRGEVKD T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELE Number of specific fragments extracted= 2 number of extra gaps= 1 total=837 Number of alignments=272 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0288 7 :VTLQKDAQNLIGISIGGG 1ihjA 18 :VTLDKTGKKSFGICIVRG T0288 26 :QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIEL Number of specific fragments extracted= 2 number of extra gaps= 1 total=839 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0288 5 :GKVTLQKDAQNLIGISIGGG 1ihjA 16 :HMVTLDKTGKKSFGICIVRG T0288 26 :QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIEL Number of specific fragments extracted= 2 number of extra gaps= 1 total=841 Number of alignments=273 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0288 4 :PGKVTLQK 1ihjA 15 :IHMVTLDK T0288 13 :AQNLIGISIGGGAQ 1ihjA 24 :GKKSFGICIVRGEV T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1ihjA 45 :TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEI Number of specific fragments extracted= 3 number of extra gaps= 0 total=844 Number of alignments=274 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)P29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYC 1ihjA 12 :GELIHMVTLDKTGKKSFGICIVRGEVKD T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYN 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 2 number of extra gaps= 1 total=846 Number of alignments=275 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)P29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 T0288 3 :VPGKVTLQKDAQNLIGISIGGGA 1ihjA 14 :LIHMVTLDKTGKKSFGICIVRGE T0288 28 :C 1ihjA 39 :D T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 3 number of extra gaps= 1 total=849 Number of alignments=276 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0288)P29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 Warning: unaligning (T0288)L88 because last residue in template chain is (1ihjA)F105 T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGA 1ihjA 12 :GELIHMVTLDKTGKKSFGICIVRGE T0288 26 :Q 1ihjA 39 :D T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 3 number of extra gaps= 1 total=852 Number of alignments=277 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0288)P29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 Warning: unaligning (T0288)L88 because last residue in template chain is (1ihjA)F105 T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGA 1ihjA 12 :GELIHMVTLDKTGKKSFGICIVRGE T0288 26 :Q 1ihjA 39 :D T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 3 number of extra gaps= 1 total=855 Number of alignments=278 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)P29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYC 1ihjA 12 :GELIHMVTLDKTGKKSFGICIVRGEVKD T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIEL Number of specific fragments extracted= 2 number of extra gaps= 1 total=857 Number of alignments=279 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)P29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYC 1ihjA 15 :IHMVTLDKTGKKSFGICIVRGEVKD T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELE Number of specific fragments extracted= 2 number of extra gaps= 1 total=859 Number of alignments=280 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0288)P29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGA 1ihjA 12 :GELIHMVTLDKTGKKSFGICIVRGE T0288 26 :Q 1ihjA 39 :D T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELE Number of specific fragments extracted= 3 number of extra gaps= 1 total=862 Number of alignments=281 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0288)P29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGA 1ihjA 12 :GELIHMVTLDKTGKKSFGICIVRGE T0288 26 :Q 1ihjA 39 :D T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELE Number of specific fragments extracted= 3 number of extra gaps= 1 total=865 Number of alignments=282 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQ 1ihjA 12 :GELIHMVTLDKTGKKSFGICIVRGEV T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1ihjA 44 :KTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIEL Number of specific fragments extracted= 2 number of extra gaps= 0 total=867 Number of alignments=283 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1ihjA 16 :HMVTLDKTGKKSFGICIVRGEV T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1ihjA 44 :KTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEI Number of specific fragments extracted= 2 number of extra gaps= 0 total=869 Number of alignments=284 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)L88 because last residue in template chain is (1ihjA)F105 T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQ 1ihjA 12 :GELIHMVTLDKTGKKSFGICIVRGEV T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1ihjA 44 :KTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 2 number of extra gaps= 0 total=871 Number of alignments=285 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0288)L88 because last residue in template chain is (1ihjA)F105 T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1ihjA 13 :ELIHMVTLDKTGKKSFGICIVRGEV T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1ihjA 44 :KTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 2 number of extra gaps= 0 total=873 Number of alignments=286 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1q3oA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1q3oA/merged-local-a2m # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 7 :VTLQKDAQNLIGISIGGGAQYCPC 1q3oA 592 :VLLQKKDSEGFGFVLRGAKAQTPI T0288 31 :LYIVQVFDNTPAALDG 1q3oA 628 :QYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMV Number of specific fragments extracted= 3 number of extra gaps= 0 total=876 Number of alignments=287 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCPC 1q3oA 590 :KTVLLQKKDSEGFGFVLRGAKAQTPI T0288 31 :LYIVQVFDNTPAALDG 1q3oA 628 :QYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVK Number of specific fragments extracted= 3 number of extra gaps= 0 total=879 Number of alignments=288 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 7 :VTLQKDAQNLIGISIGGGAQY 1q3oA 592 :VLLQKKDSEGFGFVLRGAKAQ T0288 28 :CPCLYIVQVFDNTPAALDG 1q3oA 625 :PALQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMV Number of specific fragments extracted= 3 number of extra gaps= 0 total=882 Number of alignments=289 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQY 1q3oA 591 :TVLLQKKDSEGFGFVLRGAKAQ T0288 28 :CPCLYIVQVFDNTPAALDG 1q3oA 625 :PALQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVK Number of specific fragments extracted= 3 number of extra gaps= 0 total=885 Number of alignments=290 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1q3oA 592 :VLLQKKDSEGFGFVLRGAKA T0288 27 :YCPCLYIVQVFDNTPAALDG 1q3oA 624 :FPALQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMV Number of specific fragments extracted= 3 number of extra gaps= 0 total=888 Number of alignments=291 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1q3oA 591 :TVLLQKKDSEGFGFVLRGAKA T0288 27 :YCPCLYIVQVFDNTPAALDG 1q3oA 624 :FPALQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMV Number of specific fragments extracted= 3 number of extra gaps= 0 total=891 Number of alignments=292 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQYCP 1q3oA 587 :IKEKTVLLQKKDSEGFGFVLRGAKAQTP T0288 30 :CLYIVQVFDNTPAALDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYN 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=894 Number of alignments=293 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYCP 1q3oA 589 :EKTVLLQKKDSEGFGFVLRGAKAQTP T0288 30 :CLYIVQVFDNTPAALDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVM Number of specific fragments extracted= 3 number of extra gaps= 0 total=897 Number of alignments=294 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0288)Y91 because last residue in template chain is (1q3oA)H687 T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCP 1q3oA 590 :KTVLLQKKDSEGFGFVLRGAKAQTP T0288 30 :CLYIVQVFDNTPAALDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 3 number of extra gaps= 0 total=900 Number of alignments=295 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0288)Y91 because last residue in template chain is (1q3oA)H687 T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCP 1q3oA 590 :KTVLLQKKDSEGFGFVLRGAKAQTP T0288 30 :CLYIVQVFDNTPAALDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 3 number of extra gaps= 0 total=903 Number of alignments=296 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQYCP 1q3oA 587 :IKEKTVLLQKKDSEGFGFVLRGAKAQTP T0288 30 :CLYIVQVFDNTPAALDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVK Number of specific fragments extracted= 3 number of extra gaps= 0 total=906 Number of alignments=297 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYCP 1q3oA 589 :EKTVLLQKKDSEGFGFVLRGAKAQTP T0288 30 :CLYIVQVFDNTPAALDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVK Number of specific fragments extracted= 3 number of extra gaps= 0 total=909 Number of alignments=298 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCP 1q3oA 590 :KTVLLQKKDSEGFGFVLRGAKAQTP T0288 30 :CLYIVQVFDNTPAALDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVK T0288 85 :YNK 1q3oA 684 :VTR Number of specific fragments extracted= 4 number of extra gaps= 0 total=913 Number of alignments=299 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0288)L88 because last residue in template chain is (1q3oA)H687 T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCP 1q3oA 590 :KTVLLQKKDSEGFGFVLRGAKAQTP T0288 30 :CLYIVQVFDNTPAALDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVK T0288 85 :YNK 1q3oA 684 :VTR Number of specific fragments extracted= 4 number of extra gaps= 0 total=917 Number of alignments=300 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1q3oA 587 :IKEKTVLLQKKDSEGFGFVLRGAKA T0288 27 :YCPCLYIVQVFDNTPAALDG 1q3oA 624 :FPALQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMV Number of specific fragments extracted= 3 number of extra gaps= 0 total=920 Number of alignments=301 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1q3oA 590 :KTVLLQKKDSEGFGFVLRGAKA T0288 27 :YCPCLYIVQVFDNTPAALDG 1q3oA 624 :FPALQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKV Number of specific fragments extracted= 3 number of extra gaps= 0 total=923 Number of alignments=302 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0288)Y91 because last residue in template chain is (1q3oA)H687 T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1q3oA 589 :EKTVLLQKKDSEGFGFVLRGAKA T0288 27 :YCPCLYIVQVFDNTPAALDG 1q3oA 624 :FPALQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 3 number of extra gaps= 0 total=926 Number of alignments=303 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0288)Y91 because last residue in template chain is (1q3oA)H687 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1q3oA 590 :KTVLLQKKDSEGFGFVLRGAKA T0288 27 :YCPCLYIVQVFDNTPAALDG 1q3oA 624 :FPALQYLESVDEGGVAWRAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 3 number of extra gaps= 0 total=929 Number of alignments=304 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1x6dA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1x6dA expands to /projects/compbio/data/pdb/1x6d.pdb.gz 1x6dA:# T0288 read from 1x6dA/merged-local-a2m # 1x6dA read from 1x6dA/merged-local-a2m # adding 1x6dA to template set # found chain 1x6dA in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYCP 1x6dA 16 :IHVTILHKEEGAGLGFSLAGGADLEN T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 1x6dA 43 :VITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREP Number of specific fragments extracted= 2 number of extra gaps= 0 total=931 Number of alignments=305 # 1x6dA read from 1x6dA/merged-local-a2m # found chain 1x6dA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCP 1x6dA 17 :HVTILHKEEGAGLGFSLAGGADLEN T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1x6dA 43 :VITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVT Number of specific fragments extracted= 2 number of extra gaps= 0 total=933 Number of alignments=306 # 1x6dA read from 1x6dA/merged-local-a2m # found chain 1x6dA in template set T0288 8 :TLQKDAQNLIGISIGGGAQYCP 1x6dA 20 :ILHKEEGAGLGFSLAGGADLEN T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 1x6dA 43 :VITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREP Number of specific fragments extracted= 2 number of extra gaps= 0 total=935 Number of alignments=307 # 1x6dA read from 1x6dA/merged-local-a2m # found chain 1x6dA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQY 1x6dA 17 :HVTILHKEEGAGLGFSLAGGADL T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEV 1x6dA 41 :NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPR Number of specific fragments extracted= 2 number of extra gaps= 0 total=937 Number of alignments=308 # 1x6dA read from 1x6dA/merged-local-a2m # found chain 1x6dA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1x6dA 17 :HVTILHKEEGAGLGFSLAGGAD T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1x6dA 40 :ENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQA Number of specific fragments extracted= 2 number of extra gaps= 0 total=939 Number of alignments=309 # 1x6dA read from 1x6dA/merged-local-a2m # found chain 1x6dA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1x6dA 17 :HVTILHKEEGAGLGFSLAGGAD T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1x6dA 40 :ENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVI Number of specific fragments extracted= 2 number of extra gaps= 0 total=941 Number of alignments=310 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kefA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1kefA expands to /projects/compbio/data/pdb/1kef.pdb.gz 1kefA:# T0288 read from 1kefA/merged-local-a2m # 1kefA read from 1kefA/merged-local-a2m # adding 1kefA to template set # found chain 1kefA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1kefA)E1 Warning: unaligning (T0288)Y91 because last residue in template chain is (1kefA)P93 T0288 4 :PGKVTLQKDAQN 1kefA 2 :YEEITLERGNSG T0288 17 :IGISIGGGAQYCP 1kefA 14 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1kefA 32 :SIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=944 Number of alignments=311 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set T0288 5 :GKVTLQKDAQN 1kefA 3 :EEITLERGNSG T0288 17 :IGISIGGGAQYCP 1kefA 14 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1kefA 32 :SIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=947 Number of alignments=312 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set T0288 4 :PGKVTLQKDAQN 1kefA 2 :YEEITLERGNSG T0288 17 :IGISIGGGAQYCP 1kefA 14 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kefA 32 :SIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLY Number of specific fragments extracted= 3 number of extra gaps= 0 total=950 Number of alignments=313 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set T0288 5 :GKVTLQKDAQN 1kefA 3 :EEITLERGNSG T0288 17 :IGISIGGGAQYCP 1kefA 14 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kefA 32 :SIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLY Number of specific fragments extracted= 3 number of extra gaps= 0 total=953 Number of alignments=314 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1kefA)E1 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1kefA 2 :YEEITLERGNSGLGFSIAGGTD T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1kefA 29 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRL Number of specific fragments extracted= 2 number of extra gaps= 0 total=955 Number of alignments=315 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1kefA 3 :EEITLERGNSGLGFSIAGGTD T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1kefA 29 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYV Number of specific fragments extracted= 2 number of extra gaps= 0 total=957 Number of alignments=316 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1b8qA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1b8qA expands to /projects/compbio/data/pdb/1b8q.pdb.gz 1b8qA:# T0288 read from 1b8qA/merged-local-a2m # 1b8qA read from 1b8qA/merged-local-a2m # adding 1b8qA to template set # found chain 1b8qA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1b8qA 12 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1b8qA 84 :ETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=960 Number of alignments=317 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1b8qA 11 :SVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1b8qA 84 :ETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=963 Number of alignments=318 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 6 :KVTLQKDAQNLIGISIGGG 1b8qA 11 :SVRLFKRKVGGLGFLVKER T0288 26 :QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1b8qA 30 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA T0288 79 :GEVTIHY 1b8qA 85 :THVVLIL Number of specific fragments extracted= 3 number of extra gaps= 0 total=966 Number of alignments=319 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQYC 1b8qA 6 :EPNVISVRLFKRKVGGLGFLVKERVSKP T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1b8qA 34 :PVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKLQYY 1b8qA 84 :ETHVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=969 Number of alignments=320 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1b8qA 9 :VISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKL 1b8qA 84 :ETHVVLILRGP Number of specific fragments extracted= 3 number of extra gaps= 0 total=972 Number of alignments=321 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYC 1b8qA 10 :ISVRLFKRKVGGLGFLVKERVSKP T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1b8qA 34 :PVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKLQYY 1b8qA 84 :ETHVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=975 Number of alignments=322 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYC 1b8qA 10 :ISVRLFKRKVGGLGFLVKERVSKP T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1b8qA 34 :PVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKLQYY 1b8qA 84 :ETHVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=978 Number of alignments=323 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1b8qA 12 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1b8qA 84 :ETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=981 Number of alignments=324 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1b8qA 10 :ISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1b8qA 84 :ETHVVLI T0288 85 :Y 1b8qA 94 :P Number of specific fragments extracted= 4 number of extra gaps= 0 total=985 Number of alignments=325 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQY 1b8qA 10 :ISVRLFKRKVGGLGFLVKERVSK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1b8qA 33 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1b8qA 84 :ETHVVLI T0288 85 :YNKLQYYK 1b8qA 94 :PEGFTTHL Number of specific fragments extracted= 4 number of extra gaps= 0 total=989 Number of alignments=326 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1b8qA 10 :ISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1b8qA 84 :ETHVVLI T0288 86 :NKLQYY 1b8qA 94 :PEGFTT Number of specific fragments extracted= 4 number of extra gaps= 0 total=993 Number of alignments=327 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1b8qA 12 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV Number of specific fragments extracted= 2 number of extra gaps= 0 total=995 Number of alignments=328 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1b8qA 11 :SVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVL Number of specific fragments extracted= 2 number of extra gaps= 0 total=997 Number of alignments=329 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1b8qA 9 :VISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGF Number of specific fragments extracted= 2 number of extra gaps= 0 total=999 Number of alignments=330 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1b8qA 8 :NVISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYK 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1001 Number of alignments=331 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1i92A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1i92A expands to /projects/compbio/data/pdb/1i92.pdb.gz 1i92A:Skipped atom 533, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 543, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 545, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 547, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 549, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 551, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 553, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 555, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 557, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 559, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 561, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 563, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 565, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 567, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 569, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 571, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 573, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 575, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 577, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 579, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 581, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 583, because occupancy 0.500 <= existing 0.500 in 1i92A # T0288 read from 1i92A/merged-local-a2m # 1i92A read from 1i92A/merged-local-a2m # adding 1i92A to template set # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 6 :KVTLQKDAQNLIGISIGGGA 1i92A 13 :RLCCLEKGPNGYGFHLHGEK T0288 27 :YCPCLYIVQVFDNTPAALDG 1i92A 33 :GKLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTI 1i92A 85 :AVRL Number of specific fragments extracted= 4 number of extra gaps= 1 total=1005 Number of alignments=332 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 7 :VTLQKDAQNLIGISIGGGA 1i92A 14 :LCCLEKGPNGYGFHLHGEK T0288 27 :YCPCLYIVQVFDNTPAALDG 1i92A 33 :GKLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIH 1i92A 85 :AVRLL Number of specific fragments extracted= 4 number of extra gaps= 1 total=1009 Number of alignments=333 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 4 :PGKVTLQK 1i92A 12 :PRLCCLEK T0288 13 :AQNLIGISIGGGAQ 1i92A 20 :GPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALD 1i92A 34 :KLGQYIRLVEPGSPAEKA T0288 47 :TVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 52 :GLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIHY 1i92A 85 :AVRLLV Number of specific fragments extracted= 5 number of extra gaps= 1 total=1014 Number of alignments=334 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 1 :SMVPGKVTLQKDAQN 1i92A 9 :GMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1i92A 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIHYNKLQYY 1i92A 85 :AVRLLVVDPEQD Number of specific fragments extracted= 5 number of extra gaps= 1 total=1019 Number of alignments=335 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 2 :MVPGKVTLQKDAQN 1i92A 10 :MLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1i92A 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIHYNKL 1i92A 85 :AVRLLVVDP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1024 Number of alignments=336 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 1 :SMVPGKVTLQKDAQN 1i92A 9 :GMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1i92A 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIHYNKLQYYKV 1i92A 85 :AVRLLVVDPEQDTR Number of specific fragments extracted= 5 number of extra gaps= 1 total=1029 Number of alignments=337 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 1 :SMVPGKVTLQKDAQN 1i92A 9 :GMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1i92A 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIHYNKLQYYKV 1i92A 85 :AVRLLVVDPEQDTR Number of specific fragments extracted= 5 number of extra gaps= 1 total=1034 Number of alignments=338 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 1 :SMVPGKVTLQKDAQN 1i92A 9 :GMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1i92A 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIH 1i92A 85 :AVRLL T0288 85 :YN 1i92A 93 :PE Number of specific fragments extracted= 6 number of extra gaps= 1 total=1040 Number of alignments=339 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 2 :MVPGKVTLQKDAQN 1i92A 10 :MLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1i92A 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIH 1i92A 85 :AVRLL T0288 87 :KL 1i92A 93 :PE Number of specific fragments extracted= 6 number of extra gaps= 1 total=1046 Number of alignments=340 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 1 :SMVPGKVTLQKDAQN 1i92A 9 :GMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1i92A 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIH 1i92A 85 :AVRLL T0288 85 :YNKLQYYKV 1i92A 91 :VDPEQDTRL Number of specific fragments extracted= 6 number of extra gaps= 1 total=1052 Number of alignments=341 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 1 :SMVPGKVTLQKDAQN 1i92A 9 :GMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1i92A 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIH 1i92A 85 :AVRLL T0288 85 :YN 1i92A 93 :PE Number of specific fragments extracted= 6 number of extra gaps= 1 total=1058 Number of alignments=342 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 7 :VTLQKDAQNLIGISIGGGAQ 1i92A 14 :LCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTI 1i92A 85 :AVRL Number of specific fragments extracted= 4 number of extra gaps= 1 total=1062 Number of alignments=343 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1i92A 13 :RLCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIHY 1i92A 85 :AVRLLV Number of specific fragments extracted= 4 number of extra gaps= 1 total=1066 Number of alignments=344 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1i92A 10 :MLPRLCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIHYNKLQYYKV 1i92A 85 :AVRLLVVDPEQDTR Number of specific fragments extracted= 4 number of extra gaps= 1 total=1070 Number of alignments=345 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0288)K78 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0288)G79 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1i92A 11 :LPRLCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0288 80 :EVTIHYNKLQYYKV 1i92A 85 :AVRLLVVDPEQDTR Number of specific fragments extracted= 4 number of extra gaps= 1 total=1074 Number of alignments=346 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2fneA/merged-local-a2m # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0288 7 :VTLQKDAQN 2fneA 1960 :ITLERGPDG T0288 17 :IGISIGGGAQYCP 2fneA 1969 :LGFSIVGGYGSPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 2fneA 1985 :PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1077 Number of alignments=347 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0288 5 :GKVTLQKDAQN 2fneA 1958 :KSITLERGPDG T0288 17 :IGISIGGGAQYCP 2fneA 1969 :LGFSIVGGYGSPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 2fneA 1985 :PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1080 Number of alignments=348 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0288 2 :MVPGKVTLQKDAQN 2fneA 1955 :PQCKSITLERGPDG T0288 17 :IGISIGGGAQYCP 2fneA 1969 :LGFSIVGGYGSPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fneA 1985 :PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETSV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1083 Number of alignments=349 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0288 2 :MVPGKVTLQKDAQN 2fneA 1955 :PQCKSITLERGPDG T0288 17 :IGISIGGGAQYCP 2fneA 1969 :LGFSIVGGYGSPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 2fneA 1985 :PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1086 Number of alignments=350 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0288 5 :GKVTLQKDAQN 2fneA 1958 :KSITLERGPDG T0288 17 :IGISIGGGAQYCP 2fneA 1969 :LGFSIVGGYGSPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fneA 1985 :PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLM Number of specific fragments extracted= 3 number of extra gaps= 0 total=1089 Number of alignments=351 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0288 5 :GKVTLQKDAQN 2fneA 1958 :KSITLERGPDG T0288 17 :IGISIGGGAQYCP 2fneA 1969 :LGFSIVGGYGSPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fneA 1985 :PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLM Number of specific fragments extracted= 3 number of extra gaps= 0 total=1092 Number of alignments=352 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0288 2 :MVPGKVTLQKDAQN 2fneA 1955 :PQCKSITLERGPDG T0288 17 :IGISIGGGAQY 2fneA 1969 :LGFSIVGGYGS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fneA 1983 :DLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLM T0288 86 :NKLQYY 2fneA 2042 :SSDETS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1096 Number of alignments=353 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0288 2 :MVPGKVTLQKDAQN 2fneA 1955 :PQCKSITLERGPDG T0288 17 :IGISIGGGA 2fneA 1969 :LGFSIVGGY T0288 26 :QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fneA 1981 :HGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLM T0288 86 :NKLQ 2fneA 2043 :SDET Number of specific fragments extracted= 4 number of extra gaps= 0 total=1100 Number of alignments=354 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2fneA)M1954 T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2fneA 1982 :GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1102 Number of alignments=355 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 2fneA 1957 :CKSITLERGPDGLGFSIVGGYG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 2fneA 1982 :GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1104 Number of alignments=356 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2fneA)M1954 T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fneA 1982 :GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETSV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1106 Number of alignments=357 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2fneA)M1954 T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fneA 1982 :GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETSV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1108 Number of alignments=358 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n99A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1n99A/merged-local-a2m # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1n99A 115 :VILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM Number of specific fragments extracted= 4 number of extra gaps= 0 total=1112 Number of alignments=359 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1n99A 114 :EVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1116 Number of alignments=360 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISI 1n99A 113 :REVILCKDQDGKIGLRL T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1n99A 130 :KSIDNGIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM T0288 86 :NKLQY 1n99A 191 :RDRPF Number of specific fragments extracted= 5 number of extra gaps= 1 total=1121 Number of alignments=361 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISIG 1n99A 113 :REVILCKDQDGKIGLRLK T0288 26 :QYCPCLYIVQVFDNTPAALDG 1n99A 131 :SIDNGIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM T0288 86 :NKL 1n99A 191 :RDR Number of specific fragments extracted= 5 number of extra gaps= 1 total=1126 Number of alignments=362 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM T0288 86 :NKLQY 1n99A 191 :RDRPF Number of specific fragments extracted= 5 number of extra gaps= 1 total=1131 Number of alignments=363 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM T0288 86 :NKLQYY 1n99A 191 :RDRPFE Number of specific fragments extracted= 5 number of extra gaps= 1 total=1136 Number of alignments=364 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISI 1n99A 113 :REVILCKDQDGKIGLRL T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1n99A 130 :KSIDNGIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1140 Number of alignments=365 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISI 1n99A 113 :REVILCKDQDGKIGLRL T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1n99A 130 :KSIDNGIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1144 Number of alignments=366 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1148 Number of alignments=367 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM T0288 85 :YNKLQYY 1n99A 193 :RPFERTI Number of specific fragments extracted= 5 number of extra gaps= 1 total=1153 Number of alignments=368 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKIT Number of specific fragments extracted= 3 number of extra gaps= 0 total=1156 Number of alignments=369 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1159 Number of alignments=370 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0288 78 :KGEVTI 1n99A 183 :GEKITM T0288 86 :NKLQ 1n99A 191 :RDRP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1164 Number of alignments=371 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0288)P4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0288 30 :CLYIVQVFDNTPAALDG 1n99A 135 :GIFVQLVQANSPASLVG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGE T0288 81 :VTI 1n99A 186 :ITM T0288 86 :NKLQYYK 1n99A 191 :RDRPFER Number of specific fragments extracted= 5 number of extra gaps= 1 total=1169 Number of alignments=372 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2bygA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2bygA/merged-local-a2m # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0288 1 :SMVPGKVTLQKDAQN 2bygA 188 :SMTVVEIKLFKGPKG T0288 17 :IGISIGGGAQYCP 2bygA 203 :LGFSIAGGVGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 2bygA 221 :SIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKPTTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1172 Number of alignments=373 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0288 3 :VPGKVTLQKDAQN 2bygA 190 :TVVEIKLFKGPKG T0288 17 :IGISIGGGAQYCP 2bygA 203 :LGFSIAGGVGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 2bygA 221 :SIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1175 Number of alignments=374 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0288 1 :SMVPGKVTLQKDAQN 2bygA 188 :SMTVVEIKLFKGPKG T0288 17 :IGISIGGGAQYCP 2bygA 203 :LGFSIAGGVGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2bygA 221 :SIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1178 Number of alignments=375 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0288 4 :PGKVTLQKDAQN 2bygA 191 :VVEIKLFKGPKG T0288 17 :IGISIGGGAQYCP 2bygA 203 :LGFSIAGGVGNQH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2bygA 221 :SIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLK T0288 86 :NK 2bygA 277 :GK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1182 Number of alignments=376 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 2bygA 191 :VVEIKLFKGPKGLGFSIAGGVG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2bygA 218 :GDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1184 Number of alignments=377 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 2bygA 191 :VVEIKLFKGPKGLGFSIAGGVG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 2bygA 218 :GDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1186 Number of alignments=378 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1xz9A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1xz9A expands to /projects/compbio/data/pdb/1xz9.pdb.gz 1xz9A:# T0288 read from 1xz9A/merged-local-a2m # 1xz9A read from 1xz9A/merged-local-a2m # adding 1xz9A to template set # found chain 1xz9A in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQYCP 1xz9A 9 :EPEIITVTLKKQNGMGLSIVAAKGAGQ T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1xz9A 39 :GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAI Number of specific fragments extracted= 2 number of extra gaps= 0 total=1188 Number of alignments=379 # 1xz9A read from 1xz9A/merged-local-a2m # found chain 1xz9A in template set T0288 3 :VPGKVTLQ 1xz9A 11 :EIITVTLK T0288 13 :AQNLIGISIGGGAQYCP 1xz9A 19 :KQNGMGLSIVAAKGAGQ T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1xz9A 39 :GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=1191 Number of alignments=380 # 1xz9A read from 1xz9A/merged-local-a2m # found chain 1xz9A in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYCP 1xz9A 10 :PEIITVTLKKQNGMGLSIVAAKGAGQ T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1xz9A 39 :GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1193 Number of alignments=381 # 1xz9A read from 1xz9A/merged-local-a2m # found chain 1xz9A in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYCP 1xz9A 10 :PEIITVTLKKQNGMGLSIVAAKGAGQ T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1xz9A 39 :GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1195 Number of alignments=382 # 1xz9A read from 1xz9A/merged-local-a2m # found chain 1xz9A in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1xz9A 9 :EPEIITVTLKKQNGMGLSIVAAKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1xz9A 36 :DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1197 Number of alignments=383 # 1xz9A read from 1xz9A/merged-local-a2m # found chain 1xz9A in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1xz9A 12 :IITVTLKKQNGMGLSIVAAKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1xz9A 36 :DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1199 Number of alignments=384 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wfvA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1wfvA/merged-local-a2m # 1wfvA read from 1wfvA/merged-local-a2m # found chain 1wfvA in template set T0288 1 :SMVPGKVTLQKDAQN 1wfvA 9 :DFDYFTVDMEKGAKG T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1wfvA 24 :FGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1201 Number of alignments=385 # 1wfvA read from 1wfvA/merged-local-a2m # found chain 1wfvA in template set T0288 3 :VPGKVTLQKDAQN 1wfvA 11 :DYFTVDMEKGAKG T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1wfvA 24 :FGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1203 Number of alignments=386 # 1wfvA read from 1wfvA/merged-local-a2m # found chain 1wfvA in template set T0288 1 :SMVPGKVTLQKDAQN 1wfvA 9 :DFDYFTVDMEKGAKG T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1wfvA 24 :FGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1205 Number of alignments=387 # 1wfvA read from 1wfvA/merged-local-a2m # found chain 1wfvA in template set T0288 4 :PGKVTLQKDAQN 1wfvA 12 :YFTVDMEKGAKG T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1wfvA 24 :FGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1207 Number of alignments=388 # 1wfvA read from 1wfvA/merged-local-a2m # found chain 1wfvA in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1wfvA 9 :DFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1208 Number of alignments=389 # 1wfvA read from 1wfvA/merged-local-a2m # found chain 1wfvA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1wfvA 12 :YFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1209 Number of alignments=390 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1v5lA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1v5lA expands to /projects/compbio/data/pdb/1v5l.pdb.gz 1v5lA:# T0288 read from 1v5lA/merged-local-a2m # 1v5lA read from 1v5lA/merged-local-a2m # adding 1v5lA to template set # found chain 1v5lA in template set T0288 7 :VTL 1v5lA 9 :VVL T0288 11 :KDAQN 1v5lA 12 :PGPAP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 17 :WGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCL Number of specific fragments extracted= 4 number of extra gaps= 0 total=1213 Number of alignments=391 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 6 :KVTL 1v5lA 8 :NVVL T0288 11 :KDAQN 1v5lA 12 :PGPAP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 17 :WGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1217 Number of alignments=392 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 9 :LQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 9 :VVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1219 Number of alignments=393 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 10 :QKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 10 :VLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1221 Number of alignments=394 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 9 :LQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 9 :VVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1223 Number of alignments=395 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 12 :DAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 12 :PGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1225 Number of alignments=396 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 7 :VT 1v5lA 9 :VV T0288 11 :KDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 11 :LPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1228 Number of alignments=397 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 6 :KVTL 1v5lA 8 :NVVL T0288 12 :DAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 12 :PGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1231 Number of alignments=398 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 9 :LQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 9 :VVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1233 Number of alignments=399 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 12 :DAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 12 :PGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLK T0288 86 :NKLQ 1v5lA 85 :DRAE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1236 Number of alignments=400 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 6 :KVTL 1v5lA 8 :NVVL T0288 12 :DAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 12 :PGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLK T0288 85 :YNKLQYY 1v5lA 87 :AETRLWS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1240 Number of alignments=401 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 4 :PGKVTLQ 1v5lA 6 :SGNVVLP T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 13 :GPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLK T0288 87 :KLQYY 1v5lA 87 :AETRL Number of specific fragments extracted= 4 number of extra gaps= 0 total=1244 Number of alignments=402 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 9 :LQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 9 :VVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1246 Number of alignments=403 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 10 :QKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 10 :VLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKI Number of specific fragments extracted= 2 number of extra gaps= 0 total=1248 Number of alignments=404 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 10 :QKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 10 :VLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1250 Number of alignments=405 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0288 10 :QKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1v5lA 10 :VLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET Number of specific fragments extracted= 2 number of extra gaps= 0 total=1252 Number of alignments=406 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2f5yA/merged-local-a2m # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 7 :VTLQKDAQN 2f5yA 19 :ITIPRGKDG T0288 17 :IGISIGGGA 2f5yA 28 :FGFTICCDS T0288 30 :CLYIVQVFDNTPAALDG 2f5yA 37 :PVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTI 2f5yA 71 :WKCVELAHEIRSCPSEIIL Number of specific fragments extracted= 5 number of extra gaps= 1 total=1257 Number of alignments=407 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 6 :KVTLQKDAQN 2f5yA 18 :QITIPRGKDG T0288 17 :IGISIGGGA 2f5yA 28 :FGFTICCDS T0288 30 :CLYIVQVFDNTPAALDG 2f5yA 37 :PVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIH 2f5yA 71 :WKCVELAHEIRSCPSEIILL Number of specific fragments extracted= 5 number of extra gaps= 1 total=1262 Number of alignments=408 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 21 :IGGGAQYCPCLYIVQVFDNTPAALDG 2f5yA 28 :FGFTICCDSPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTI 2f5yA 71 :WKCVELAHEIRSCPSEIIL Number of specific fragments extracted= 3 number of extra gaps= 1 total=1265 Number of alignments=409 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 21 :IGGGAQYCPCLYIVQVFDNTPAALDG 2f5yA 28 :FGFTICCDSPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTI 2f5yA 71 :WKCVELAHEIRSCPSEIIL Number of specific fragments extracted= 3 number of extra gaps= 1 total=1268 Number of alignments=410 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)V3 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f5yA)V95 T0288 4 :PGKVTLQKDAQN 2f5yA 16 :YRQITIPRGKDG T0288 17 :IGISIGGGA 2f5yA 28 :FGFTICCDS T0288 30 :CLYIVQVFDNTPAALDG 2f5yA 37 :PVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIHYNKL 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 5 number of extra gaps= 1 total=1273 Number of alignments=411 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)V3 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 4 :PGKVTLQKDAQN 2f5yA 16 :YRQITIPRGKDG T0288 17 :IGISIGGG 2f5yA 28 :FGFTICCD T0288 29 :PCLYIVQVFDNTPAALDG 2f5yA 36 :SPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIHYNKL 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 5 number of extra gaps= 2 total=1278 Number of alignments=412 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)V3 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f5yA)V95 T0288 4 :PGKVTLQKDAQN 2f5yA 16 :YRQITIPRGKDG T0288 17 :IGISIGGGA 2f5yA 28 :FGFTICCDS T0288 30 :CLYIVQVFDNTPAALDG 2f5yA 37 :PVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIHYNKL 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 5 number of extra gaps= 1 total=1283 Number of alignments=413 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)V3 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f5yA)V95 T0288 4 :PGKVTLQKDAQN 2f5yA 16 :YRQITIPRGKDG T0288 17 :IGISIGG 2f5yA 28 :FGFTICC T0288 28 :CPCLYIVQVFDNTPAALDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIHYNKL 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 5 number of extra gaps= 1 total=1288 Number of alignments=414 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)V3 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 4 :PGKVTLQKDAQN 2f5yA 16 :YRQITIPRGKDG T0288 17 :IGISIGGGA 2f5yA 28 :FGFTICCDS T0288 30 :CLYIVQVFDNTPAALDG 2f5yA 37 :PVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIH 2f5yA 71 :WKCVELAHEIRSCPSEIILL Number of specific fragments extracted= 5 number of extra gaps= 1 total=1293 Number of alignments=415 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)V3 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 4 :PGKVTLQKDAQN 2f5yA 16 :YRQITIPRGKDG T0288 17 :IGISIGG 2f5yA 28 :FGFTICC T0288 28 :CPCLYIVQVFDNTPAALDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIH 2f5yA 71 :WKCVELAHEIRSCPSEIILL Number of specific fragments extracted= 5 number of extra gaps= 2 total=1298 Number of alignments=416 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)V3 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0288)L88 because last residue in template chain is (2f5yA)V95 T0288 4 :PGKVTLQKDAQN 2f5yA 16 :YRQITIPRGKDG T0288 17 :IGISIGGG 2f5yA 28 :FGFTICCD T0288 29 :PCLYIVQVFDNTPAALDG 2f5yA 36 :SPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIH 2f5yA 71 :WKCVELAHEIRSCPSEIILL T0288 85 :YNK 2f5yA 92 :WRM Number of specific fragments extracted= 6 number of extra gaps= 1 total=1304 Number of alignments=417 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)M2 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)V3 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 4 :PGKVTLQKDAQN 2f5yA 16 :YRQITIPRGKDG T0288 17 :IGISIGG 2f5yA 28 :FGFTICC T0288 28 :CPCLYIVQVFDNTPAALDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIH 2f5yA 71 :WKCVELAHEIRSCPSEIILL Number of specific fragments extracted= 5 number of extra gaps= 1 total=1309 Number of alignments=418 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)P4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 5 :GKVTLQKDAQNLIGISIGGG 2f5yA 16 :YRQITIPRGKDGFGFTICCD T0288 29 :PCLYIVQVFDNTPAALDG 2f5yA 36 :SPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTI 2f5yA 71 :WKCVELAHEIRSCPSEIIL Number of specific fragments extracted= 4 number of extra gaps= 2 total=1313 Number of alignments=419 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 5 :GKVTLQKDAQNLIGISIGGG 2f5yA 16 :YRQITIPRGKDGFGFTICCD T0288 29 :PCLYIVQVFDNTPAALDG 2f5yA 36 :SPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIHY 2f5yA 71 :WKCVELAHEIRSCPSEIILLV Number of specific fragments extracted= 4 number of extra gaps= 1 total=1317 Number of alignments=420 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)P4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f5yA)V95 T0288 5 :GKVTLQKDAQNLIGISIGGG 2f5yA 16 :YRQITIPRGKDGFGFTICCD T0288 29 :PCLYIVQVFDNTPAALDG 2f5yA 36 :SPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIHYNKL 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1321 Number of alignments=421 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0288)P4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0288)K63 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0288)G64 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0288 5 :GKVTLQKDAQNLIGISIGGG 2f5yA 16 :YRQITIPRGKDGFGFTICCD T0288 29 :PCLYIVQVFDNTPAALDG 2f5yA 36 :SPVRVQAVDSGGPAERAG T0288 48 :VAAGDEITGVNGRSI 2f5yA 54 :LQQLDTVLQLNERPV T0288 65 :KTKVEVAKMIQEVKGEVTIHYNKL 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1325 Number of alignments=422 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1iu0A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1iu0A expands to /projects/compbio/data/pdb/1iu0.pdb.gz 1iu0A:# T0288 read from 1iu0A/merged-local-a2m # 1iu0A read from 1iu0A/merged-local-a2m # adding 1iu0A to template set # found chain 1iu0A in template set Warning: unaligning (T0288)M2 because first residue in template chain is (1iu0A)M1 Warning: unaligning (T0288)L88 because last residue in template chain is (1iu0A)R91 T0288 3 :VPGKVTLQKDAQN 1iu0A 2 :EYEEITLERGNSG T0288 17 :IGISIGGGAQYCP 1iu0A 15 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1iu0A 33 :SIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1328 Number of alignments=423 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set T0288 4 :PGKVTLQKDAQN 1iu0A 3 :YEEITLERGNSG T0288 17 :IGISIGGGAQYCP 1iu0A 15 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1iu0A 33 :SIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1331 Number of alignments=424 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set Warning: unaligning (T0288)M2 because first residue in template chain is (1iu0A)M1 T0288 3 :VPGKVTLQKDAQN 1iu0A 2 :EYEEITLERGNSG T0288 17 :IGISIGGGAQYCP 1iu0A 15 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1iu0A 33 :SIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1334 Number of alignments=425 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set T0288 4 :PGKVTLQKDAQN 1iu0A 3 :YEEITLERGNSG T0288 17 :IGISIGGGAQYCP 1iu0A 15 :LGFSIAGGTDNPH T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1iu0A 33 :SIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1337 Number of alignments=426 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1iu0A 2 :EYEEITLERGNSGLGFSIAGGTD T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1iu0A 30 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1339 Number of alignments=427 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1iu0A 3 :YEEITLERGNSGLGFSIAGGTD T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1iu0A 30 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1341 Number of alignments=428 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1t2mA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1t2mA expands to /projects/compbio/data/pdb/1t2m.pdb.gz 1t2mA:# T0288 read from 1t2mA/merged-local-a2m # 1t2mA read from 1t2mA/merged-local-a2m # adding 1t2mA to template set # found chain 1t2mA in template set Warning: unaligning (T0288)Y90 because last residue in template chain is (1t2mA)A93 T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQYCP 1t2mA 3 :EPEIITVTLKKQNGMGLSIVAAKGAGQ T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 1t2mA 33 :GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1343 Number of alignments=429 # 1t2mA read from 1t2mA/merged-local-a2m # found chain 1t2mA in template set T0288 3 :VPGKVTLQK 1t2mA 5 :EIITVTLKK T0288 14 :QNLIGISIGGGAQYCP 1t2mA 14 :QNGMGLSIVAAKGAGQ T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1t2mA 33 :GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=1346 Number of alignments=430 # 1t2mA read from 1t2mA/merged-local-a2m # found chain 1t2mA in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYCP 1t2mA 4 :PEIITVTLKKQNGMGLSIVAAKGAGQ T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1t2mA 33 :GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1348 Number of alignments=431 # 1t2mA read from 1t2mA/merged-local-a2m # found chain 1t2mA in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYCP 1t2mA 4 :PEIITVTLKKQNGMGLSIVAAKGAGQ T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1t2mA 33 :GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1350 Number of alignments=432 # 1t2mA read from 1t2mA/merged-local-a2m # found chain 1t2mA in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1t2mA 3 :EPEIITVTLKKQNGMGLSIVAAKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1t2mA 30 :DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1352 Number of alignments=433 # 1t2mA read from 1t2mA/merged-local-a2m # found chain 1t2mA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1t2mA 6 :IITVTLKKQNGMGLSIVAAKG T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1t2mA 30 :DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1354 Number of alignments=434 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1l6oA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1l6oA expands to /projects/compbio/data/pdb/1l6o.pdb.gz 1l6oA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0288 read from 1l6oA/merged-local-a2m # 1l6oA read from 1l6oA/merged-local-a2m # adding 1l6oA to template set # found chain 1l6oA in template set Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :Y 1l6oA 277 :G T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV Number of specific fragments extracted= 11 number of extra gaps= 11 total=1365 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 T0288 6 :K 1l6oA 254 :T T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :Y 1l6oA 277 :G T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV Number of specific fragments extracted= 12 number of extra gaps= 11 total=1377 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 T0288 4 :PGK 1l6oA 252 :IIT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :Y 1l6oA 277 :G T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV Number of specific fragments extracted= 12 number of extra gaps= 11 total=1389 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 T0288 5 :GK 1l6oA 253 :IT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :Y 1l6oA 277 :G T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV Number of specific fragments extracted= 12 number of extra gaps= 11 total=1401 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0288)N86 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0288)L88 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0288)Q89 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 T0288 4 :PGK 1l6oA 252 :IIT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :YCP 1l6oA 275 :ERG T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV T0288 87 :K 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1414 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0288)N86 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0288)L88 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 T0288 4 :PGK 1l6oA 252 :IIT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :YCP 1l6oA 275 :ERG T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV T0288 87 :K 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1427 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0288)N86 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0288)L88 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0288)Q89 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0288)Y90 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0288)Y91 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 T0288 4 :PGK 1l6oA 252 :IIT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :YCP 1l6oA 275 :ERG T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV T0288 87 :K 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1440 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0288)N86 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0288)L88 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0288)Q89 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0288)Y90 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0288)Y91 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 Warning: unaligning (T0288)K92 because last residue in template chain is (1l6oA)H345 T0288 4 :PGK 1l6oA 252 :IIT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGG 1l6oA 269 :IVG T0288 25 :AQY 1l6oA 275 :ERG T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV T0288 87 :K 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1453 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 T0288 6 :K 1l6oA 254 :T T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :YCP 1l6oA 275 :ERG T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV Number of specific fragments extracted= 12 number of extra gaps= 11 total=1465 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 T0288 5 :GK 1l6oA 253 :IT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :YCP 1l6oA 275 :ERG T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV Number of specific fragments extracted= 12 number of extra gaps= 11 total=1477 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0288)K87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0288)L88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0288)Q89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 T0288 4 :PGK 1l6oA 252 :IIT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :YCP 1l6oA 275 :ERG T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV T0288 86 :N 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1490 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0288)Y85 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0288)N86 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0288)K87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 T0288 4 :PGK 1l6oA 252 :IIT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGG 1l6oA 269 :IVG T0288 25 :AQY 1l6oA 275 :ERG T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV Number of specific fragments extracted= 12 number of extra gaps= 12 total=1502 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 T0288 5 :GK 1l6oA 253 :IT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :Y 1l6oA 277 :G T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I Number of specific fragments extracted= 11 number of extra gaps= 10 total=1513 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 T0288 6 :K 1l6oA 254 :T T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :Y 1l6oA 277 :G T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :VKGEV 1l6oA 327 :IVHKP Number of specific fragments extracted= 11 number of extra gaps= 10 total=1524 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0288)N86 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0288)L88 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0288)Q89 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0288)Y90 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0288)Y91 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 Warning: unaligning (T0288)K92 because last residue in template chain is (1l6oA)H345 T0288 4 :PGK 1l6oA 252 :IIT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :Y 1l6oA 277 :G T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV T0288 87 :K 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1537 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0288)V7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0288)T8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0288)D12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0288)A13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0288)Q14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0288)N15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0288)S20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0288)C30 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0288)A42 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0288)A43 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0288)N58 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0288)G59 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0288)S61 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0288)I62 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0288)G64 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0288)T66 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0288)Q75 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0288)I83 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0288)H84 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0288)Y85 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0288)N86 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0288)L88 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0288)Q89 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0288)Y90 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0288)Y91 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 Warning: unaligning (T0288)K92 because last residue in template chain is (1l6oA)H345 T0288 4 :PGK 1l6oA 252 :IIT T0288 9 :LQK 1l6oA 257 :LNM T0288 18 :G 1l6oA 266 :G T0288 21 :IGGG 1l6oA 269 :IVGQ T0288 27 :Y 1l6oA 277 :G T0288 31 :LYIVQVFDNTP 1l6oA 281 :IYIGSIMKGGA T0288 44 :LDGTVAAGDEITGV 1l6oA 294 :ADGRIEPGDMLLQV T0288 60 :R 1l6oA 310 :I T0288 63 :K 1l6oA 313 :E T0288 67 :KVEVAKMI 1l6oA 317 :NDDAVRVL T0288 77 :V 1l6oA 327 :I T0288 78 :KGEVT 1l6oA 331 :PGPIV T0288 87 :K 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1550 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qauA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1qauA/merged-local-a2m # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 6 :KVTLQKDAQNLIGISIGGG 1qauA 17 :SVRLFKRKVGGLGFLVKER T0288 26 :QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1qauA 36 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA T0288 79 :GEVTIHY 1qauA 91 :THVVLIL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1553 Number of alignments=435 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1qauA 18 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTI 1qauA 90 :ETHVVL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1556 Number of alignments=436 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1qauA 17 :SVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1qauA 90 :ETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1559 Number of alignments=437 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1qauA 18 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1561 Number of alignments=438 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1qauA 17 :SVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1563 Number of alignments=439 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1qauA 17 :SVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1565 Number of alignments=440 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1qauA 17 :SVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1567 Number of alignments=441 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYC 1qauA 15 :VISVRLFKRKVGGLGFLVKERVSKP T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qauA 40 :PVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKLQYY 1qauA 90 :ETHVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=1570 Number of alignments=442 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1qauA 16 :ISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKL 1qauA 90 :ETHVVLILRGP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1573 Number of alignments=443 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYC 1qauA 15 :VISVRLFKRKVGGLGFLVKERVSKP T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qauA 40 :PVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKLQYY 1qauA 90 :ETHVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=1576 Number of alignments=444 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0288)V3 because first residue in template chain is (1qauA)N14 T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYC 1qauA 15 :VISVRLFKRKVGGLGFLVKERVSKP T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qauA 40 :PVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIHYNKLQYY 1qauA 90 :ETHVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=1579 Number of alignments=445 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1qauA 18 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1qauA 90 :ETHVVLI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1582 Number of alignments=446 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1qauA 17 :SVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1qauA 90 :ETHVVLI T0288 85 :Y 1qauA 100 :P Number of specific fragments extracted= 4 number of extra gaps= 0 total=1586 Number of alignments=447 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1qauA 15 :VISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1qauA 90 :ETHVVLI T0288 85 :YNKLQY 1qauA 107 :LETTFT Number of specific fragments extracted= 4 number of extra gaps= 0 total=1590 Number of alignments=448 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1qauA 15 :VISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0288 78 :KGEVTIH 1qauA 90 :ETHVVLI T0288 85 :YNKLQY 1qauA 105 :THLETT Number of specific fragments extracted= 4 number of extra gaps= 0 total=1594 Number of alignments=449 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1qauA 18 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1596 Number of alignments=450 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1qauA 18 :VRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1598 Number of alignments=451 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1qauA 15 :VISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS T0288 80 :EVTIHYNKLQYY 1qauA 92 :HVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=1601 Number of alignments=452 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1qauA 15 :VISVRLFKRKVGGLGFLVKERVS T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA T0288 79 :GEVTIHYNKLQYYKV 1qauA 91 :THVVLILRGPEGFTT Number of specific fragments extracted= 3 number of extra gaps= 0 total=1604 Number of alignments=453 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1be9A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1be9A expands to /projects/compbio/data/pdb/1be9.pdb.gz 1be9A:# T0288 read from 1be9A/merged-local-a2m # 1be9A read from 1be9A/merged-local-a2m # adding 1be9A to template set # found chain 1be9A in template set T0288 7 :VTLQKDAQN 1be9A 314 :IVIHRGSTG T0288 17 :IGISIGGGAQ 1be9A 323 :LGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII Number of specific fragments extracted= 3 number of extra gaps= 0 total=1607 Number of alignments=454 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 5 :GKVTLQKDAQN 1be9A 312 :RRIVIHRGSTG T0288 17 :IGISIGGGAQ 1be9A 323 :LGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII Number of specific fragments extracted= 3 number of extra gaps= 0 total=1610 Number of alignments=455 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 7 :VTLQKDA 1be9A 314 :IVIHRGS T0288 15 :NLIGISIGGGAQ 1be9A 321 :TGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1613 Number of alignments=456 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 6 :KVTLQKDA 1be9A 313 :RIVIHRGS T0288 15 :NLIGISIGGGAQ 1be9A 321 :TGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII Number of specific fragments extracted= 3 number of extra gaps= 0 total=1616 Number of alignments=457 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 4 :PGKVTLQK 1be9A 311 :PRRIVIHR T0288 13 :AQNLIGISIGGGAQ 1be9A 319 :GSTGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1619 Number of alignments=458 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 1 :SMVPGKVTLQKDAQN 1be9A 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1be9A 323 :LGFNIIGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1be9A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1622 Number of alignments=459 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 3 :VPGKVTLQKDAQN 1be9A 310 :EPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1be9A 323 :LGFNIIGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1be9A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1625 Number of alignments=460 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 2 :MVPGKVTLQKDAQN 1be9A 309 :REPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1be9A 323 :LGFNIIGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1be9A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1628 Number of alignments=461 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 2 :MVPGKVTLQKDAQN 1be9A 309 :REPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1be9A 323 :LGFNIIGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1be9A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1631 Number of alignments=462 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 1 :SMVPGKVTLQKDAQN 1be9A 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQ 1be9A 323 :LGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII T0288 85 :YNKLQYY 1be9A 394 :PEEYSRF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1635 Number of alignments=463 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 3 :VPGKVTLQKDAQN 1be9A 310 :EPRRIVIHRGSTG T0288 17 :IGISIGGGAQ 1be9A 323 :LGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII T0288 85 :YNK 1be9A 394 :PEE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1639 Number of alignments=464 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 2 :MVPGKVTLQKDAQN 1be9A 309 :REPRRIVIHRGSTG T0288 17 :IGISIGGGAQY 1be9A 323 :LGFNIIGGEDG T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1be9A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII Number of specific fragments extracted= 3 number of extra gaps= 0 total=1642 Number of alignments=465 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 2 :MVPGKVTLQKDAQN 1be9A 309 :REPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1be9A 323 :LGFNIIGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1be9A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII Number of specific fragments extracted= 3 number of extra gaps= 0 total=1645 Number of alignments=466 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 8 :TLQKDAQNLIGISIGGGAQ 1be9A 314 :IVIHRGSTGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTI Number of specific fragments extracted= 2 number of extra gaps= 0 total=1647 Number of alignments=467 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1be9A 312 :RRIVIHRGSTGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1649 Number of alignments=468 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1be9A 309 :REPRRIVIHRGSTGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1651 Number of alignments=469 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1be9A 309 :REPRRIVIHRGSTGLGFNIIGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1653 Number of alignments=470 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwaA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1kwaA expands to /projects/compbio/data/pdb/1kwa.pdb.gz 1kwaA:# T0288 read from 1kwaA/merged-local-a2m # 1kwaA read from 1kwaA/merged-local-a2m # adding 1kwaA to template set # found chain 1kwaA in template set T0288 5 :GKVTLQKDAQNLIGISIGG 1kwaA 489 :RLVQFQKNTDEPMGITLKM T0288 26 :QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1kwaA 508 :NELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKI Number of specific fragments extracted= 2 number of extra gaps= 0 total=1655 Number of alignments=471 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQY 1kwaA 491 :VQFQKNTDEPMGITLKMNELN T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1kwaA 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF Number of specific fragments extracted= 2 number of extra gaps= 0 total=1657 Number of alignments=472 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQY 1kwaA 490 :LVQFQKNTDEPMGITLKMNELN T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kwaA 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1659 Number of alignments=473 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0288 6 :KVTLQKDAQNLIGISIGGG 1kwaA 490 :LVQFQKNTDEPMGITLKMN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF Number of specific fragments extracted= 2 number of extra gaps= 0 total=1661 Number of alignments=474 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0288 6 :KVTLQKDAQNLIGISIGGG 1kwaA 490 :LVQFQKNTDEPMGITLKMN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF Number of specific fragments extracted= 2 number of extra gaps= 0 total=1663 Number of alignments=475 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0288 5 :GKVTLQKDAQNLIGISI 1kwaA 489 :RLVQFQKNTDEPMGITL T0288 24 :GAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 1kwaA 506 :KMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1665 Number of alignments=476 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0288 5 :GKVTLQKDAQNLIGISIG 1kwaA 489 :RLVQFQKNTDEPMGITLK T0288 25 :AQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1kwaA 507 :MNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1667 Number of alignments=477 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1kwaA)R487 T0288 4 :PGKVTLQKDAQNLIGISIG 1kwaA 488 :SRLVQFQKNTDEPMGITLK T0288 25 :AQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1kwaA 507 :MNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1669 Number of alignments=478 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1kwaA)R487 T0288 4 :PGKVTLQKDAQNLIGISIG 1kwaA 488 :SRLVQFQKNTDEPMGITLK T0288 23 :GGAQ 1kwaA 508 :NELN T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1kwaA 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1672 Number of alignments=479 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0288)Y90 because last residue in template chain is (1kwaA)F574 T0288 5 :GKVTLQKDAQNLIGISIG 1kwaA 489 :RLVQFQKNTDEPMGITLK T0288 25 :AQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kwaA 507 :MNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK T0288 85 :YNKLQ 1kwaA 569 :PSYRE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1675 Number of alignments=480 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0288 5 :GKVTLQKDAQNLIGISIG 1kwaA 489 :RLVQFQKNTDEPMGITLK T0288 25 :AQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kwaA 507 :MNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK T0288 85 :YN 1kwaA 569 :PS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1678 Number of alignments=481 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1kwaA)R487 T0288 4 :PGKVTLQKDAQNLIGISIG 1kwaA 488 :SRLVQFQKNTDEPMGITLK T0288 26 :QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kwaA 508 :NELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK T0288 85 :YNKLQ 1kwaA 569 :PSYRE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1681 Number of alignments=482 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1kwaA)R487 T0288 4 :PGKVTLQKDAQNLIGISIG 1kwaA 488 :SRLVQFQKNTDEPMGITLK T0288 23 :GGAQ 1kwaA 508 :NELN T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kwaA 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1684 Number of alignments=483 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1kwaA 490 :LVQFQKNTDEPMGITLKMNEL T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1kwaA 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF Number of specific fragments extracted= 2 number of extra gaps= 0 total=1686 Number of alignments=484 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0288 6 :KVTLQKDAQNLIGISIGGGA 1kwaA 490 :LVQFQKNTDEPMGITLKMNE T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1kwaA 510 :LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKI Number of specific fragments extracted= 2 number of extra gaps= 0 total=1688 Number of alignments=485 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1kwaA 488 :SRLVQFQKNTDEPMGITLKMNEL T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1kwaA 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1690 Number of alignments=486 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0288)K92 because last residue in template chain is (1kwaA)F574 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1kwaA 489 :RLVQFQKNTDEPMGITLKMNEL T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1kwaA 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1692 Number of alignments=487 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1gm1A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1gm1A expands to /projects/compbio/data/pdb/1gm1.pdb.gz 1gm1A:# T0288 read from 1gm1A/merged-local-a2m # 1gm1A read from 1gm1A/merged-local-a2m # adding 1gm1A to template set # found chain 1gm1A in template set Warning: unaligning (T0288)Y91 because last residue in template chain is (1gm1A)P102 T0288 5 :GKVTLQKDAQN 1gm1A 14 :FEVELAKTDGS T0288 17 :IGISIGGGAQYCP 1gm1A 25 :LGISVTGGVNTSV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1gm1A 41 :GIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1695 Number of alignments=488 # 1gm1A read from 1gm1A/merged-local-a2m # found chain 1gm1A in template set T0288 4 :PGKVTLQKDAQN 1gm1A 13 :TFEVELAKTDGS T0288 17 :IGISIGGGAQYCP 1gm1A 25 :LGISVTGGVNTSV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1gm1A 41 :GIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKG Number of specific fragments extracted= 3 number of extra gaps= 0 total=1698 Number of alignments=489 # 1gm1A read from 1gm1A/merged-local-a2m # found chain 1gm1A in template set T0288 6 :KVTLQKDAQN 1gm1A 15 :EVELAKTDGS T0288 17 :IGISIGGGAQYCP 1gm1A 25 :LGISVTGGVNTSV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1gm1A 41 :GIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1701 Number of alignments=490 # 1gm1A read from 1gm1A/merged-local-a2m # found chain 1gm1A in template set T0288 5 :GKVTLQKDAQN 1gm1A 14 :FEVELAKTDGS T0288 17 :IGISIGGGAQYCP 1gm1A 25 :LGISVTGGVNTSV T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYN 1gm1A 41 :GIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1704 Number of alignments=491 # 1gm1A read from 1gm1A/merged-local-a2m # found chain 1gm1A in template set T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1gm1A 10 :PGDTFEVELAKTDGSLGISVTGGVN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1gm1A 38 :RHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1706 Number of alignments=492 # 1gm1A read from 1gm1A/merged-local-a2m # found chain 1gm1A in template set T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1gm1A 13 :TFEVELAKTDGSLGISVTGGVN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1gm1A 38 :RHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1708 Number of alignments=493 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1te0A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1te0A expands to /projects/compbio/data/pdb/1te0.pdb.gz 1te0A:# T0288 read from 1te0A/merged-local-a2m # 1te0A read from 1te0A/merged-local-a2m # adding 1te0A to template set # found chain 1te0A in template set Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 31 :LYI 1te0A 282 :IVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 64 :GKTKVEVAKMIQEVKGEVTIHY 1te0A 314 :SALETMDQVAEIRPGSVIPVVV Number of specific fragments extracted= 6 number of extra gaps= 5 total=1714 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 64 :GKTKVEVAKMIQEVKGEVTI 1te0A 314 :SALETMDQVAEIRPGSVIPV Number of specific fragments extracted= 6 number of extra gaps= 5 total=1720 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)T47 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 31 :LYI 1te0A 282 :IVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 64 :GKTKVEVAKMIQEVKGEVTIHYNK 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMR Number of specific fragments extracted= 6 number of extra gaps= 5 total=1726 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)T47 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 64 :GKTKVEVAKMIQEVKGEVTIH 1te0A 314 :SALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 6 number of extra gaps= 6 total=1732 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 64 :GK 1te0A 314 :SA Number of specific fragments extracted= 6 number of extra gaps= 6 total=1738 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 64 :GK 1te0A 314 :SA T0288 68 :VEVAKMIQEV 1te0A 316 :LETMDQVAEI T0288 78 :KGEVTIHY 1te0A 328 :GSVIPVVV Number of specific fragments extracted= 8 number of extra gaps= 6 total=1746 Number of alignments=494 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 13 :A 1te0A 271 :A T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 66 :TKVEVAKMIQEV 1te0A 314 :SALETMDQVAEI T0288 78 :KGEVTIHYNKLQYY 1te0A 328 :GSVIPVVVMRDDKQ Number of specific fragments extracted= 8 number of extra gaps= 6 total=1754 Number of alignments=495 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 12 :DA 1te0A 270 :HA T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 66 :TKVEVAKMIQEV 1te0A 314 :SALETMDQVAEI T0288 78 :KGEVTIHYNKLQY 1te0A 328 :GSVIPVVVMRDDK Number of specific fragments extracted= 8 number of extra gaps= 6 total=1762 Number of alignments=496 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 64 :GK 1te0A 314 :SA Number of specific fragments extracted= 6 number of extra gaps= 6 total=1768 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 64 :GK 1te0A 314 :SA Number of specific fragments extracted= 6 number of extra gaps= 6 total=1774 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 Warning: unaligning (T0288)Y91 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)T343 T0288 13 :A 1te0A 271 :A T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 66 :TKVEVAKMIQEV 1te0A 314 :SALETMDQVAEI T0288 78 :KGEVTIH 1te0A 328 :GSVIPVV T0288 86 :NKLQY 1te0A 337 :RDDKQ Number of specific fragments extracted= 9 number of extra gaps= 7 total=1783 Number of alignments=497 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 Warning: unaligning (T0288)Y90 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)T343 T0288 8 :TLQK 1te0A 262 :GGRE T0288 12 :DA 1te0A 270 :HA T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 66 :TKVEVAKMIQEV 1te0A 314 :SALETMDQVAEI T0288 78 :KGEVTIH 1te0A 328 :GSVIPVV T0288 85 :YNKLQ 1te0A 337 :RDDKQ Number of specific fragments extracted= 10 number of extra gaps= 7 total=1793 Number of alignments=498 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP Number of specific fragments extracted= 5 number of extra gaps= 5 total=1798 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 64 :GK 1te0A 314 :SA T0288 68 :VEVAKMIQEV 1te0A 316 :LETMDQVAEI Number of specific fragments extracted= 7 number of extra gaps= 6 total=1805 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K65 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 66 :TKVEVAKMIQEVKGEVTIHYNKLQYYKV 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDKQ Number of specific fragments extracted= 6 number of extra gaps= 6 total=1811 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0288)A25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0288)Q26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0288)V34 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0288)Q35 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0288)A43 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0288)G46 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0288)D52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0288)E53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0288)I62 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0288)K63 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0288 12 :DA 1te0A 270 :HA T0288 27 :YCPCLYI 1te0A 278 :QLQGIVV T0288 36 :VFD 1te0A 287 :VSP T0288 41 :PA 1te0A 292 :PA T0288 48 :VAAG 1te0A 298 :IQVN T0288 54 :ITGVNGRS 1te0A 304 :IISVDNKP T0288 66 :TKVEVAKMIQEVKGEVTIHYNKLQYYK 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDK Number of specific fragments extracted= 7 number of extra gaps= 6 total=1818 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwaB/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1kwaB expands to /projects/compbio/data/pdb/1kwa.pdb.gz 1kwaB:# T0288 read from 1kwaB/merged-local-a2m # 1kwaB read from 1kwaB/merged-local-a2m # adding 1kwaB to template set # found chain 1kwaB in template set Warning: unaligning (T0288)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 5 :GKVTLQKDAQNLIGISIG 1kwaB 489 :RLVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKI Number of specific fragments extracted= 2 number of extra gaps= 1 total=1820 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)G24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 6 :KVTLQKDAQNLIGISIG 1kwaB 490 :LVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF Number of specific fragments extracted= 2 number of extra gaps= 1 total=1822 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)G24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 6 :KVTLQKDAQNLIGISIG 1kwaB 490 :LVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF Number of specific fragments extracted= 2 number of extra gaps= 1 total=1824 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 5 :GKVTLQKDAQNLIGISI 1kwaB 489 :RLVQFQKNTDEPMGITL T0288 26 :Q 1kwaB 506 :K T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY Number of specific fragments extracted= 3 number of extra gaps= 1 total=1827 Number of alignments=499 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 5 :GKVTLQKDAQNLIGISIG 1kwaB 489 :RLVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 2 number of extra gaps= 1 total=1829 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 4 :PGKVTLQKDAQNLIGISIG 1kwaB 488 :SRLVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 2 number of extra gaps= 1 total=1831 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 4 :PGKVTLQKDAQNLIGISIG 1kwaB 488 :SRLVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 2 number of extra gaps= 1 total=1833 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 Warning: unaligning (T0288)Y90 because last residue in template chain is (1kwaB)F574 T0288 5 :GKVTLQKDAQNLIGISI 1kwaB 489 :RLVQFQKNTDEPMGITL T0288 26 :Q 1kwaB 506 :K T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK T0288 85 :YNKLQ 1kwaB 569 :PSYRE Number of specific fragments extracted= 4 number of extra gaps= 1 total=1837 Number of alignments=500 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)Y27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 5 :GKVTLQKDAQNLIGISIG 1kwaB 489 :RLVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK T0288 85 :YNK 1kwaB 569 :PSY Number of specific fragments extracted= 3 number of extra gaps= 1 total=1840 Number of alignments=501 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0288)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 Warning: unaligning (T0288)Y90 because last residue in template chain is (1kwaB)F574 T0288 4 :PGKVTLQKDAQNLIGISIG 1kwaB 488 :SRLVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK T0288 85 :YNKLQ 1kwaB 569 :PSYRE Number of specific fragments extracted= 3 number of extra gaps= 1 total=1843 Number of alignments=502 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)V3 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0288)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)C28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 Warning: unaligning (T0288)Y90 because last residue in template chain is (1kwaB)F574 T0288 4 :PGKVTLQKDAQNLIGISIG 1kwaB 488 :SRLVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK T0288 85 :YNKLQ 1kwaB 569 :PSYRE Number of specific fragments extracted= 3 number of extra gaps= 1 total=1846 Number of alignments=503 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)G24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 6 :KVTLQKDAQNLIGISIG 1kwaB 490 :LVQFQKNTDEPMGITLK T0288 25 :AQ 1kwaB 511 :NH T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1kwaB 513 :CIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF Number of specific fragments extracted= 3 number of extra gaps= 1 total=1849 Number of alignments=504 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)G24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 6 :KVTLQKDAQNLIGISIG 1kwaB 490 :LVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKI Number of specific fragments extracted= 2 number of extra gaps= 1 total=1851 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)G24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 Warning: unaligning (T0288)K92 because last residue in template chain is (1kwaB)F574 T0288 4 :PGKVTLQKDAQNLIGISIG 1kwaB 488 :SRLVQFQKNTDEPMGITLK T0288 25 :A 1kwaB 511 :N T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1kwaB 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 3 number of extra gaps= 1 total=1854 Number of alignments=505 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0288)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0288)G24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0288 4 :PGKVTLQKDAQNLIGISIG 1kwaB 488 :SRLVQFQKNTDEPMGITLK T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 2 number of extra gaps= 1 total=1856 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1nteA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1nteA expands to /projects/compbio/data/pdb/1nte.pdb.gz 1nteA:Skipped atom 107, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 281, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 283, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 285, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 287, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 289, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 291, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 332, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 334, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 336, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 338, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 340, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 373, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 595, because occupancy 0.300 <= existing 0.700 in 1nteA Skipped atom 597, because occupancy 0.300 <= existing 0.700 in 1nteA Skipped atom 599, because occupancy 0.300 <= existing 0.700 in 1nteA Skipped atom 601, because occupancy 0.300 <= existing 0.700 in 1nteA # T0288 read from 1nteA/merged-local-a2m # 1nteA read from 1nteA/merged-local-a2m # adding 1nteA to template set # found chain 1nteA in template set T0288 7 :VTLQKDAQNLIGISIGGG 1nteA 199 :ITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1nteA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1859 Number of alignments=506 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set T0288 5 :GKVTLQKDAQNLIGISIGGG 1nteA 197 :RTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1nteA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT Number of specific fragments extracted= 3 number of extra gaps= 0 total=1862 Number of alignments=507 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set T0288 7 :VTLQKDAQNLIGISIGG 1nteA 199 :ITMHKDSTGHVGFIFKN T0288 31 :LYIVQVFDNTPAALDG 1nteA 216 :GKITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1865 Number of alignments=508 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set T0288 6 :KVTLQKDAQNLIGISIGG 1nteA 198 :TITMHKDSTGHVGFIFKN T0288 31 :LYIVQVFDNTPAALDG 1nteA 216 :GKITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1868 Number of alignments=509 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0288)M2 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0288)V3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0288 4 :PGKVTLQKDAQNLIGISIGGGA 1nteA 196 :PRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1nteA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 1 total=1871 Number of alignments=510 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0288)V3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0288 4 :PGKVTLQKDAQNLIGISIGGGA 1nteA 196 :PRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1nteA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 1 total=1874 Number of alignments=511 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0288)M2 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0288)V3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 Warning: unaligning (T0288)Q89 because last residue in template chain is (1nteA)F273 T0288 1 :S 1nteA 193 :A T0288 4 :PGKVTLQKDAQNLIGISIGGGA 1nteA 196 :PRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1nteA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 1 total=1878 Number of alignments=512 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0288)M2 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0288)V3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0288 1 :S 1nteA 193 :A T0288 4 :PGKVTLQKDAQNLIGISIGGG 1nteA 196 :PRTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1nteA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 1 total=1882 Number of alignments=513 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set T0288 4 :PGKVTLQKDAQNLIGISIGGGA 1nteA 196 :PRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1nteA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT Number of specific fragments extracted= 3 number of extra gaps= 0 total=1885 Number of alignments=514 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0288)V3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0288 4 :PGKVTLQKDAQNLIGISIGGGA 1nteA 196 :PRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1nteA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT Number of specific fragments extracted= 3 number of extra gaps= 1 total=1888 Number of alignments=515 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0288)M2 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0288)V3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0288 4 :PGKVTLQKDAQNLIGISIGGGA 1nteA 196 :PRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1nteA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT T0288 85 :YN 1nteA 271 :PA Number of specific fragments extracted= 4 number of extra gaps= 1 total=1892 Number of alignments=516 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0288)M2 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0288)V3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0288 1 :S 1nteA 193 :A T0288 4 :PGKVTLQKDAQNLIGISIGGG 1nteA 196 :PRTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1nteA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT Number of specific fragments extracted= 4 number of extra gaps= 1 total=1896 Number of alignments=517 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0288)M2 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0288)V3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0288 1 :S 1nteA 193 :A T0288 4 :PGKVTLQKDAQNLIGISIGGGA 1nteA 196 :PRTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1nteA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI Number of specific fragments extracted= 4 number of extra gaps= 1 total=1900 Number of alignments=518 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set T0288 5 :GKVTLQKDAQNLIGISIGGGA 1nteA 197 :RTITMHKDSTGHVGFIFKNGK T0288 33 :IVQVFDNTPAALDG 1nteA 218 :ITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1903 Number of alignments=519 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0288)M2 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0288)V3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0288 4 :PGKVTLQKDAQNLIGISIGGG 1nteA 196 :PRTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1nteA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 1 total=1906 Number of alignments=520 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0288)V3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0288 4 :PGKVTLQKDAQNLIGISIGGG 1nteA 196 :PRTITMHKDSTGHVGFIFKNG T0288 32 :YIVQVFDNTPAALDG 1nteA 217 :KITSIVKDSSAARNG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 1 total=1909 Number of alignments=521 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2fcfA/merged-local-a2m # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)Q14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 T0288 7 :VTLQKD 2fcfA 1152 :VELWRE T0288 15 :N 2fcfA 1161 :S T0288 17 :IGISIGGG 2fcfA 1162 :LGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1913 Number of alignments=522 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)Q14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 T0288 6 :KVTLQKD 2fcfA 1151 :RVELWRE T0288 15 :N 2fcfA 1161 :S T0288 17 :IGISIGGG 2fcfA 1162 :LGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1917 Number of alignments=523 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1918 Number of alignments=524 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)L16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)I17 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 15 :N 2fcfA 1169 :G T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVF Number of specific fragments extracted= 2 number of extra gaps= 1 total=1920 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 3 number of extra gaps= 1 total=1923 Number of alignments=525 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 2 :MVPGKVTLQKD 2fcfA 1147 :MQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSI Number of specific fragments extracted= 3 number of extra gaps= 1 total=1926 Number of alignments=526 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=1929 Number of alignments=527 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=1932 Number of alignments=528 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFM Number of specific fragments extracted= 3 number of extra gaps= 1 total=1935 Number of alignments=529 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 2 :MVPGKVTLQKD 2fcfA 1147 :MQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 3 number of extra gaps= 1 total=1938 Number of alignments=530 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=1941 Number of alignments=531 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYK 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTR Number of specific fragments extracted= 3 number of extra gaps= 1 total=1944 Number of alignments=532 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVF Number of specific fragments extracted= 3 number of extra gaps= 1 total=1947 Number of alignments=533 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 5 :GKVTLQKD 2fcfA 1150 :RRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMV Number of specific fragments extracted= 3 number of extra gaps= 1 total=1950 Number of alignments=534 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 1 :SMVPGKVTLQKD 2fcfA 1146 :SMQPRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=1953 Number of alignments=535 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0288)A13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0288)N15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0288)A25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0288)Q26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0288 4 :PGKVTLQKD 2fcfA 1149 :PRRVELWRE T0288 16 :LIGISIGGG 2fcfA 1161 :SLGISIVGG T0288 31 :LYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=1956 Number of alignments=536 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vj6A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1vj6A/merged-local-a2m # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0288)D45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 Warning: unaligning (T0288)Y91 because last residue in template chain is (1vj6A)P102 T0288 5 :GKVTLQKDAQN 1vj6A 14 :FEVELAKTDGS T0288 17 :IGISIGGGAQYCP 1vj6A 25 :LGISVTGGVNTSV T0288 30 :CLYIVQVFD 1vj6A 41 :GIYVKAIIP T0288 41 :PAA 1vj6A 52 :AAE T0288 46 :GT 1vj6A 57 :GR T0288 50 :AGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQY 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQV Number of specific fragments extracted= 6 number of extra gaps= 3 total=1962 Number of alignments=537 # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0288)D45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0288 4 :PGKVTLQKDAQN 1vj6A 13 :TFEVELAKTDGS T0288 17 :IGISIGGGAQYCP 1vj6A 25 :LGISVTGGVNTSV T0288 30 :CLYIVQVFD 1vj6A 41 :GIYVKAIIP T0288 41 :PAA 1vj6A 52 :AAE T0288 46 :GT 1vj6A 57 :GR T0288 50 :AGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKG Number of specific fragments extracted= 6 number of extra gaps= 3 total=1968 Number of alignments=538 # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0288)D45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0288 6 :KVTLQKDAQN 1vj6A 15 :EVELAKTDGS T0288 17 :IGISIGGGAQYCP 1vj6A 25 :LGISVTGGVNTSV T0288 30 :CLYIVQVFD 1vj6A 41 :GIYVKAIIP T0288 41 :PAA 1vj6A 52 :AAE T0288 46 :GT 1vj6A 57 :GR T0288 50 :AGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLL Number of specific fragments extracted= 6 number of extra gaps= 3 total=1974 Number of alignments=539 # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0288)D45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0288 5 :GKVTLQKDAQN 1vj6A 14 :FEVELAKTDGS T0288 17 :IGISIGGGAQYCP 1vj6A 25 :LGISVTGGVNTSV T0288 30 :CLYIVQVFD 1vj6A 41 :GIYVKAIIP T0288 41 :PAA 1vj6A 52 :AAE T0288 46 :GT 1vj6A 57 :GR T0288 50 :AGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYN 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLE Number of specific fragments extracted= 6 number of extra gaps= 3 total=1980 Number of alignments=540 # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0288)D45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0288 1 :SMVPGKVTLQKDAQNLIGISIGGGAQ 1vj6A 9 :KPGDTFEVELAKTDGSLGISVTGGVN T0288 27 :YCPCLYIVQVFD 1vj6A 38 :RHGGIYVKAIIP T0288 41 :PAA 1vj6A 52 :AAE T0288 46 :GT 1vj6A 57 :GR T0288 50 :AGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHL Number of specific fragments extracted= 5 number of extra gaps= 3 total=1985 Number of alignments=541 # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0288)N39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0288)T40 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0288)L44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0288)D45 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0288)A49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1vj6A 13 :TFEVELAKTDGSLGISVTGGVN T0288 27 :YCPCLYIVQVFD 1vj6A 38 :RHGGIYVKAIIP T0288 41 :PAA 1vj6A 52 :AAE T0288 46 :GT 1vj6A 57 :GR T0288 50 :AGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLL Number of specific fragments extracted= 5 number of extra gaps= 3 total=1990 Number of alignments=542 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1tp5A/merged-local-a2m # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 T0288 7 :VTLQKDAQN 1tp5A 314 :IVIHRGSTG T0288 17 :IGISIGGGAQ 1tp5A 323 :LGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT Number of specific fragments extracted= 3 number of extra gaps= 1 total=1993 Number of alignments=543 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 6 :KVTLQKDAQN 1tp5A 313 :RIVIHRGSTG T0288 17 :IGISIGGGAQ 1tp5A 323 :LGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT Number of specific fragments extracted= 3 number of extra gaps= 1 total=1996 Number of alignments=544 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1tp5A 312 :RRIVIHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT Number of specific fragments extracted= 2 number of extra gaps= 1 total=1998 Number of alignments=545 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1tp5A 312 :RRIVIHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT Number of specific fragments extracted= 2 number of extra gaps= 1 total=2000 Number of alignments=546 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 1 :SMVPGKVTLQKDAQN 1tp5A 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1tp5A 323 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNKLQY 1tp5A 390 :AQYKPE Number of specific fragments extracted= 4 number of extra gaps= 1 total=2004 Number of alignments=547 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 3 :VPGKVTLQKDAQN 1tp5A 310 :EPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1tp5A 323 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNKL 1tp5A 390 :AQYK Number of specific fragments extracted= 4 number of extra gaps= 1 total=2008 Number of alignments=548 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 2 :MVPGKVTLQKDAQN 1tp5A 309 :REPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1tp5A 323 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNK 1tp5A 390 :AQY Number of specific fragments extracted= 4 number of extra gaps= 1 total=2012 Number of alignments=549 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 1 :SMVPGKVTLQKDAQN 1tp5A 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQYC 1tp5A 323 :LGFNIVGGEDGE T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 335 :GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNKL 1tp5A 390 :AQYK Number of specific fragments extracted= 4 number of extra gaps= 1 total=2016 Number of alignments=550 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 1 :SMVPGKVTLQKDAQN 1tp5A 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQ 1tp5A 323 :LGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNKLQYY 1tp5A 394 :PEEYSRF Number of specific fragments extracted= 4 number of extra gaps= 1 total=2020 Number of alignments=551 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 3 :VPGKVTLQKDAQN 1tp5A 310 :EPRRIVIHRGSTG T0288 17 :IGISIGGGAQ 1tp5A 323 :LGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNK 1tp5A 394 :PEE Number of specific fragments extracted= 4 number of extra gaps= 1 total=2024 Number of alignments=552 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 2 :MVPGKVTLQKDAQN 1tp5A 309 :REPRRIVIHRGSTG T0288 17 :IGISIGGGAQY 1tp5A 323 :LGFNIVGGEDG T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT Number of specific fragments extracted= 3 number of extra gaps= 1 total=2027 Number of alignments=553 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 1 :SMVPGKVTLQKDAQN 1tp5A 308 :PREPRRIVIHRGSTG T0288 17 :IGISIGGGAQY 1tp5A 323 :LGFNIVGGEDG T0288 29 :PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT Number of specific fragments extracted= 3 number of extra gaps= 1 total=2030 Number of alignments=554 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 T0288 8 :TLQKDAQNLIGISIGGGAQ 1tp5A 314 :IVIHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT Number of specific fragments extracted= 2 number of extra gaps= 1 total=2032 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1tp5A 312 :RRIVIHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :Y 1tp5A 390 :A Number of specific fragments extracted= 3 number of extra gaps= 1 total=2035 Number of alignments=555 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNK 1tp5A 390 :AQY Number of specific fragments extracted= 3 number of extra gaps= 1 total=2038 Number of alignments=556 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0288 2 :MVPGKVTLQKDAQNLIGISIGGGAQ 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGED T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0288 85 :YNK 1tp5A 390 :AQY Number of specific fragments extracted= 3 number of extra gaps= 1 total=2041 Number of alignments=557 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1mfgA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1mfgA/merged-local-a2m # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 T0288 7 :VTLQKDAQNLIGISIGGGAQ 1mfgA 1281 :IRVRVEKDPELGFSISGGVG T0288 27 :YCPCLYIVQVFDNTPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE Number of specific fragments extracted= 4 number of extra gaps= 2 total=2045 Number of alignments=558 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 7 :VTLQKDAQNLIGISIGGGAQ 1mfgA 1281 :IRVRVEKDPELGFSISGGVG T0288 27 :YCPCLYIVQVFDNTPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE Number of specific fragments extracted= 4 number of extra gaps= 2 total=2049 Number of alignments=559 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 T0288 7 :VTLQKDAQ 1mfgA 1283 :VRVEKDPE T0288 17 :IGISIGGGAQ 1mfgA 1291 :LGFSISGGVG T0288 27 :YCPCLYIVQVFDNTPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE Number of specific fragments extracted= 5 number of extra gaps= 2 total=2054 Number of alignments=560 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 5 :GKVTLQKDAQ 1mfgA 1281 :IRVRVEKDPE T0288 17 :IGISIGGGAQ 1mfgA 1291 :LGFSISGGVG T0288 27 :YCPCLYIVQVFDNTPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE Number of specific fragments extracted= 5 number of extra gaps= 2 total=2059 Number of alignments=561 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 T0288 7 :VTLQKDAQNLIGISIGGGAQY 1mfgA 1281 :IRVRVEKDPELGFSISGGVGG T0288 28 :CPCLYIVQVFDNTPA 1mfgA 1310 :DDGIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE Number of specific fragments extracted= 4 number of extra gaps= 2 total=2063 Number of alignments=562 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 T0288 7 :VTLQKDAQNLIGISIGGGAQY 1mfgA 1281 :IRVRVEKDPELGFSISGGVGG T0288 28 :CPCLYIVQVFDNTPA 1mfgA 1310 :DDGIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE Number of specific fragments extracted= 4 number of extra gaps= 2 total=2067 Number of alignments=563 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCP 1mfgA 1279 :MEIRVRVEKDPELGFSISGGVGGRG T0288 30 :CLYIVQVFDNTPA 1mfgA 1312 :GIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE T0288 85 :YNK 1mfgA 1365 :IVR Number of specific fragments extracted= 5 number of extra gaps= 2 total=2072 Number of alignments=564 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 5 :GKVTLQK 1mfgA 1281 :IRVRVEK T0288 14 :QNLIGISIGGGAQYCP 1mfgA 1288 :DPELGFSISGGVGGRG T0288 30 :CLYIVQVFDNTPAA 1mfgA 1312 :GIFVTRVQPEGPAS T0288 46 :GTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1326 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE T0288 85 :YNKL 1mfgA 1365 :IVRE Number of specific fragments extracted= 6 number of extra gaps= 2 total=2078 Number of alignments=565 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 Warning: unaligning (T0288)Y91 because last residue in template chain is (1mfgA)S1371 T0288 1 :SMVPGKVTLQKDAQ 1mfgA 1277 :GSMEIRVRVEKDPE T0288 17 :IGISIGGGAQYCP 1mfgA 1291 :LGFSISGGVGGRG T0288 30 :CLYIVQVFDNTPA 1mfgA 1312 :GIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE T0288 85 :YNKLQY 1mfgA 1365 :IVREVS Number of specific fragments extracted= 6 number of extra gaps= 2 total=2084 Number of alignments=566 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 Warning: unaligning (T0288)Y91 because last residue in template chain is (1mfgA)S1371 T0288 1 :SMVPGKVTLQKDAQ 1mfgA 1277 :GSMEIRVRVEKDPE T0288 17 :IGISIGGGAQYCP 1mfgA 1291 :LGFSISGGVGGRG T0288 30 :CLYIVQVFDNTPA 1mfgA 1312 :GIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE T0288 85 :YNKLQY 1mfgA 1365 :IVREVS Number of specific fragments extracted= 6 number of extra gaps= 2 total=2090 Number of alignments=567 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCP 1mfgA 1279 :MEIRVRVEKDPELGFSISGGVGGRG T0288 30 :CLYIVQVFDNTPA 1mfgA 1312 :GIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE Number of specific fragments extracted= 4 number of extra gaps= 2 total=2094 Number of alignments=568 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 7 :VTLQKDAQNLIGISIGGGAQYCP 1mfgA 1281 :IRVRVEKDPELGFSISGGVGGRG T0288 30 :CLYIVQVFDNTPAA 1mfgA 1312 :GIFVTRVQPEGPAS T0288 46 :GTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1326 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE Number of specific fragments extracted= 4 number of extra gaps= 2 total=2098 Number of alignments=569 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 1 :SMVPGKVTLQKDAQ 1mfgA 1277 :GSMEIRVRVEKDPE T0288 17 :IGISIGGGAQYCP 1mfgA 1291 :LGFSISGGVGGRG T0288 30 :CLYIVQVFDNTPA 1mfgA 1312 :GIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE T0288 86 :NKL 1mfgA 1367 :REV Number of specific fragments extracted= 6 number of extra gaps= 2 total=2104 Number of alignments=570 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 1 :SMVPGKVTLQKDAQ 1mfgA 1277 :GSMEIRVRVEKDPE T0288 17 :IGISIGGGAQYCP 1mfgA 1291 :LGFSISGGVGGRG T0288 30 :CLYIVQVFDNTPA 1mfgA 1312 :GIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE T0288 85 :Y 1mfgA 1369 :V Number of specific fragments extracted= 6 number of extra gaps= 2 total=2110 Number of alignments=571 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 T0288 5 :GKVTLQKDAQNLIGISIGGGAQ 1mfgA 1279 :MEIRVRVEKDPELGFSISGGVG T0288 27 :YCPCLYIVQVFDNTPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE Number of specific fragments extracted= 4 number of extra gaps= 2 total=2114 Number of alignments=572 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 8 :TLQKDAQNLIGISIGGGAQ 1mfgA 1282 :RVRVEKDPELGFSISGGVG T0288 27 :YCPCLYIVQVFDNTPAA 1mfgA 1309 :DDDGIFVTRVQPEGPAS T0288 46 :GTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1326 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE T0288 85 :Y 1mfgA 1365 :I Number of specific fragments extracted= 5 number of extra gaps= 2 total=2119 Number of alignments=573 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1mfgA 1278 :SMEIRVRVEKDPELGFSISGGVG T0288 27 :YCPCLYIVQVFDNTPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE T0288 85 :YNKLQY 1mfgA 1365 :IVREVS Number of specific fragments extracted= 5 number of extra gaps= 2 total=2124 Number of alignments=574 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0288)E80 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0288)I83 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0288)H84 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1mfgA 1278 :SMEIRVRVEKDPELGFSISGGVG T0288 27 :YCPCLYIVQVFDNTPA 1mfgA 1309 :DDDGIFVTRVQPEGPA T0288 45 :DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0288 81 :VT 1mfgA 1361 :VE T0288 85 :YNKLQY 1mfgA 1365 :IVREVS Number of specific fragments extracted= 5 number of extra gaps= 2 total=2129 Number of alignments=575 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n7fA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1n7fA/merged-local-a2m # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0288 7 :VTLQKDAQN 1n7fA 673 :VELKRYGGP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1n7fA 682 :LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTL Number of specific fragments extracted= 2 number of extra gaps= 0 total=2131 Number of alignments=576 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0288 5 :GKVTLQKDAQN 1n7fA 671 :YTVELKRYGGP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n7fA 682 :LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2133 Number of alignments=577 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1n7fA 669 :IIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2134 Number of alignments=578 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1n7fA 671 :YTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2135 Number of alignments=579 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0288)M2 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0288)L88 because last residue in template chain is (1n7fA)Q753 T0288 3 :VPGKVTLQKDAQN 1n7fA 669 :IIYTVELKRYGGP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1n7fA 682 :LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2137 Number of alignments=580 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0288)L88 because last residue in template chain is (1n7fA)Q753 T0288 3 :VPGKVTLQKDAQ 1n7fA 669 :IIYTVELKRYGG T0288 16 :LIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1n7fA 681 :PLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2139 Number of alignments=581 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0288)M2 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0288)L88 because last residue in template chain is (1n7fA)Q753 T0288 3 :VPGKVTLQK 1n7fA 669 :IIYTVELKR T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1n7fA 678 :YGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2141 Number of alignments=582 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0288)M2 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0288)L88 because last residue in template chain is (1n7fA)Q753 T0288 3 :VPGKVTLQK 1n7fA 669 :IIYTVELKR T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1n7fA 678 :YGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2143 Number of alignments=583 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0288)M2 because first residue in template chain is (1n7fA)A668 T0288 3 :VPGKVTLQKDAQN 1n7fA 669 :IIYTVELKRYGGP T0288 17 :IGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n7fA 682 :LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2145 Number of alignments=584 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0288 4 :PGKVTLQKDA 1n7fA 670 :IYTVELKRYG T0288 15 :NLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n7fA 680 :GPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2147 Number of alignments=585 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0288)M2 because first residue in template chain is (1n7fA)A668 T0288 3 :VPGKVTLQK 1n7fA 669 :IIYTVELKR T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n7fA 678 :YGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2149 Number of alignments=586 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0288)M2 because first residue in template chain is (1n7fA)A668 T0288 3 :VPGKVTLQK 1n7fA 669 :IIYTVELKR T0288 13 :AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1n7fA 678 :YGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2151 Number of alignments=587 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1n7fA 670 :IYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2152 Number of alignments=588 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0288 5 :GKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1n7fA 670 :IYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKI Number of specific fragments extracted= 1 number of extra gaps= 0 total=2153 Number of alignments=589 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0288)V3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0288)L88 because last residue in template chain is (1n7fA)Q753 T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1n7fA 669 :IIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 1 number of extra gaps= 0 total=2154 Number of alignments=590 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0288)V3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0288)L88 because last residue in template chain is (1n7fA)Q753 T0288 4 :PGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 1n7fA 669 :IIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 1 number of extra gaps= 0 total=2155 Number of alignments=591 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 2f0aA/merged-local-a2m # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0288 7 :VTLQKDA 2f0aA 255 :VTLNMEK T0288 16 :LIGISIGGGAQ 2f0aA 264 :FLGISIVGQSN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHY 2f0aA 331 :PGPIVLTV Number of specific fragments extracted= 4 number of extra gaps= 1 total=2159 Number of alignments=592 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0288 5 :GKVTLQKDA 2f0aA 253 :ITVTLNMEK T0288 16 :LIGISIGGGAQ 2f0aA 264 :FLGISIVGQSN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHYN 2f0aA 331 :PGPIVLTVA Number of specific fragments extracted= 4 number of extra gaps= 1 total=2163 Number of alignments=593 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0288 7 :VTLQKDA 2f0aA 255 :VTLNMEK T0288 16 :LIGISIGGGAQ 2f0aA 264 :FLGISIVGQSN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI Number of specific fragments extracted= 3 number of extra gaps= 1 total=2166 Number of alignments=594 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0288 7 :VTLQKDA 2f0aA 255 :VTLNMEK T0288 16 :LIGISIGGGAQ 2f0aA 264 :FLGISIVGQSN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDIVHKPGP Number of specific fragments extracted= 3 number of extra gaps= 1 total=2169 Number of alignments=595 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f0aA)E342 T0288 4 :PGKVTLQKDA 2f0aA 252 :IITVTLNMEK T0288 16 :LIGISIGGGAQYCP 2f0aA 264 :FLGISIVGQSNERG T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 280 :GIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHYNKL 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2173 Number of alignments=596 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0288 4 :PGKVTLQKDA 2f0aA 252 :IITVTLNMEK T0288 16 :LIGISIGGGAQYCP 2f0aA 264 :FLGISIVGQSNERG T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 280 :GIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHYNKL 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2177 Number of alignments=597 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f0aA)E342 T0288 4 :PGKVTLQKDA 2f0aA 252 :IITVTLNMEK T0288 16 :LIGISIGGGAQ 2f0aA 264 :FLGISIVGQSN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHYNKL 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2181 Number of alignments=598 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f0aA)E342 T0288 4 :PGKVTLQ 2f0aA 252 :IITVTLN T0288 16 :LIGISIGG 2f0aA 264 :FLGISIVG T0288 24 :GAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 274 :NERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHYNKL 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2185 Number of alignments=599 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0288 6 :KVTLQKDA 2f0aA 254 :TVTLNMEK T0288 16 :LIGISIGGGAQYCP 2f0aA 264 :FLGISIVGQSNERG T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 280 :GIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIH 2f0aA 331 :PGPIVLT Number of specific fragments extracted= 4 number of extra gaps= 1 total=2189 Number of alignments=600 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0288 5 :GKVTLQKDA 2f0aA 253 :ITVTLNMEK T0288 16 :LIGISIGGGAQYCP 2f0aA 264 :FLGISIVGQSNERG T0288 30 :CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 280 :GIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIH 2f0aA 331 :PGPIVLT Number of specific fragments extracted= 4 number of extra gaps= 1 total=2193 Number of alignments=601 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0288)L88 because last residue in template chain is (2f0aA)E342 T0288 4 :PGKVTLQKDA 2f0aA 252 :IITVTLNMEK T0288 16 :LIGISIGGGAQY 2f0aA 264 :FLGISIVGQSNE T0288 28 :CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 278 :DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIH 2f0aA 331 :PGPIVLT T0288 87 :K 2f0aA 341 :L Number of specific fragments extracted= 5 number of extra gaps= 1 total=2198 Number of alignments=602 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)V3 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0288)N86 because last residue in template chain is (2f0aA)E342 T0288 4 :PGKVTLQ 2f0aA 252 :IITVTLN T0288 16 :LIGISIGG 2f0aA 264 :FLGISIVG T0288 24 :GAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 274 :NERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIH 2f0aA 331 :PGPIVLT T0288 85 :Y 2f0aA 341 :L Number of specific fragments extracted= 5 number of extra gaps= 1 total=2203 Number of alignments=603 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0288 5 :GKVTLQKDA 2f0aA 253 :ITVTLNMEK T0288 16 :LIGISIGGGAQ 2f0aA 264 :FLGISIVGQSN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI Number of specific fragments extracted= 3 number of extra gaps= 1 total=2206 Number of alignments=604 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0288 6 :KVTLQKDA 2f0aA 254 :TVTLNMEK T0288 16 :LIGISIGGGAQ 2f0aA 264 :FLGISIVGQSN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEV 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDIVHKP Number of specific fragments extracted= 3 number of extra gaps= 1 total=2209 Number of alignments=605 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)Q14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f0aA)E342 T0288 4 :PGKVTLQKDA 2f0aA 252 :IITVTLNMEK T0288 16 :LIGISIGGGAQ 2f0aA 264 :FLGISIVGQSN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHYNKL 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2213 Number of alignments=606 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0288)N15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0288)Q89 because last residue in template chain is (2f0aA)E342 T0288 16 :LIGISIGGGAQ 2f0aA 264 :FLGISIVGQSN T0288 27 :YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0288 78 :KGEVTIHYNKL 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 3 number of extra gaps= 1 total=2216 Number of alignments=607 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1lcyA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1lcyA expands to /projects/compbio/data/pdb/1lcy.pdb.gz 1lcyA:# T0288 read from 1lcyA/merged-local-a2m # 1lcyA read from 1lcyA/merged-local-a2m # adding 1lcyA to template set # found chain 1lcyA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVA 1lcyA 234 :LTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRP T0288 51 :GDEITGVNGRSIKGKTKVEVAK 1lcyA 277 :GDVILAIGEQMVQNAEDVYEAV T0288 76 :EVKGEVTIHY 1lcyA 299 :RTQSQLAVQI Number of specific fragments extracted= 3 number of extra gaps= 0 total=2219 Number of alignments=608 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 11 :KDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVA 1lcyA 238 :PSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRP T0288 51 :GDEITGVNGRSIKGKTKVEVAK 1lcyA 277 :GDVILAIGEQMVQNAEDVYEAV T0288 76 :EVKGEVTI 1lcyA 299 :RTQSQLAV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2222 Number of alignments=609 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1lcyA 234 :LTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKG 1lcyA 274 :LRPGDVILAIGEQMVQN T0288 67 :KVEVAKMIQ 1lcyA 291 :AEDVYEAVR T0288 77 :VKGEVTIHYNK 1lcyA 300 :TQSQLAVQIRR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2226 Number of alignments=610 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 7 :VTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDG 1lcyA 234 :LTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKG 1lcyA 274 :LRPGDVILAIGEQMVQN T0288 67 :KVEVAKMIQ 1lcyA 291 :AEDVYEAVR T0288 77 :VKGEVTIH 1lcyA 300 :TQSQLAVQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=2230 Number of alignments=611 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 26 :QYCPCLYIVQVFDNTPAALDG 1lcyA 253 :DVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKGK 1lcyA 274 :LRPGDVILAIGEQMVQNA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2232 Number of alignments=612 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1lcyA 252 :PDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKGK 1lcyA 274 :LRPGDVILAIGEQMVQNA T0288 68 :VEVAKMIQ 1lcyA 292 :EDVYEAVR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2235 Number of alignments=613 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1lcyA 252 :PDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKG 1lcyA 274 :LRPGDVILAIGEQMVQN T0288 67 :KVEVAKMIQE 1lcyA 291 :AEDVYEAVRT T0288 78 :KGEVTIHYNKLQY 1lcyA 301 :QSQLAVQIRRGRE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2239 Number of alignments=614 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 13 :AQ 1lcyA 249 :PS T0288 24 :GAQYCPCLYIVQVFDNTPAALDG 1lcyA 251 :FPDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKG 1lcyA 274 :LRPGDVILAIGEQMVQN T0288 67 :KVEVAKMIQE 1lcyA 291 :AEDVYEAVRT T0288 78 :KGEVTIHYNKLQY 1lcyA 301 :QSQLAVQIRRGRE Number of specific fragments extracted= 5 number of extra gaps= 0 total=2244 Number of alignments=615 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 26 :QYCPCLYIVQVFDNTPAALDG 1lcyA 253 :DVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKGK 1lcyA 274 :LRPGDVILAIGEQMVQNA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2246 Number of alignments=616 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1lcyA 252 :PDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKGK 1lcyA 274 :LRPGDVILAIGEQMVQNA T0288 68 :VEVAKMI 1lcyA 292 :EDVYEAV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2249 Number of alignments=617 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 13 :AQN 1lcyA 249 :PSF T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1lcyA 252 :PDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKG 1lcyA 274 :LRPGDVILAIGEQMVQN T0288 67 :KVEVAKMIQEVKG 1lcyA 291 :AEDVYEAVRTQSQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=2253 Number of alignments=618 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 12 :DAQN 1lcyA 248 :EPSF T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1lcyA 252 :PDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKG 1lcyA 274 :LRPGDVILAIGEQMVQN T0288 67 :KVEVAKMIQEV 1lcyA 291 :AEDVYEAVRTQ T0288 79 :GEVTIH 1lcyA 302 :SQLAVQ Number of specific fragments extracted= 5 number of extra gaps= 0 total=2258 Number of alignments=619 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 26 :QYCPCLYIVQVFDNTPAALDG 1lcyA 253 :DVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKGK 1lcyA 274 :LRPGDVILAIGEQMVQNA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2260 Number of alignments=620 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1lcyA 252 :PDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKGK 1lcyA 274 :LRPGDVILAIGEQMVQNA T0288 68 :VEVAKMI 1lcyA 292 :EDVYEAV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2263 Number of alignments=621 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1lcyA 252 :PDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKG 1lcyA 274 :LRPGDVILAIGEQMVQN T0288 67 :KVEVAKMIQE 1lcyA 291 :AEDVYEAVRT T0288 78 :KGEVTIHYNKLQYY 1lcyA 301 :QSQLAVQIRRGRET Number of specific fragments extracted= 4 number of extra gaps= 0 total=2267 Number of alignments=622 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0288 24 :GAQYCPCLYIVQVFDNTPAALDG 1lcyA 251 :FPDVQHGVLIHKVILGSPAHRAG T0288 48 :VAAGDEITGVNGRSIKG 1lcyA 274 :LRPGDVILAIGEQMVQN T0288 67 :KVEVAKMIQEV 1lcyA 291 :AEDVYEAVRTQ T0288 79 :GEVTIHYNKLQY 1lcyA 302 :SQLAVQIRRGRE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2271 Number of alignments=623 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1sotA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1sotA expands to /projects/compbio/data/pdb/1sot.pdb.gz 1sotA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0288 read from 1sotA/merged-local-a2m # 1sotA read from 1sotA/merged-local-a2m # adding 1sotA to template set # found chain 1sotA in template set Warning: unaligning (T0288)Y85 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1sotA 298 :IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2273 Number of alignments=624 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)G22 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)G281 Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0288 18 :GISI 1sotA 260 :GIGG T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1sotA 298 :IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2276 Number of alignments=625 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)G22 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)G281 Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0288)Y85 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0288 16 :LIGISI 1sotA 258 :YIGIGG T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1sotA 298 :IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2279 Number of alignments=626 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)G22 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)G281 Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0288 16 :LIGISI 1sotA 258 :YIGIGG T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1sotA 298 :IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2282 Number of alignments=627 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKGK 1sotA 298 :IQVNDLIISVDNKPAISA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2284 Number of alignments=628 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0288)Y85 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKGK 1sotA 298 :IQVNDLIISVDNKPAISA T0288 68 :VEVAKMIQEV 1sotA 316 :LETMDQVAEI T0288 78 :KGEVTIH 1sotA 328 :GSVIPVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2288 Number of alignments=629 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0288)Y85 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0288)Y91 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKG 1sotA 298 :IQVNDLIISVDNKPAIS T0288 67 :KVEVAKMIQEV 1sotA 315 :ALETMDQVAEI T0288 78 :KGEVTIH 1sotA 328 :GSVIPVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2292 Number of alignments=630 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKG 1sotA 298 :IQVNDLIISVDNKPAIS T0288 67 :KVEVAKMIQEV 1sotA 315 :ALETMDQVAEI T0288 78 :KGEVTIH 1sotA 328 :GSVIPVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2296 Number of alignments=631 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKGK 1sotA 298 :IQVNDLIISVDNKPAISA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2298 Number of alignments=632 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKGK 1sotA 298 :IQVNDLIISVDNKPAISA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2300 Number of alignments=633 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0288)N86 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKG 1sotA 298 :IQVNDLIISVDNKPAIS T0288 67 :KVEVAKMIQEV 1sotA 315 :ALETMDQVAEI T0288 78 :KGEVTIH 1sotA 328 :GSVIPVV T0288 87 :K 1sotA 342 :L Number of specific fragments extracted= 5 number of extra gaps= 0 total=2305 Number of alignments=634 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0288)N86 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0288 9 :LQKDAQNLIGISIG 1sotA 205 :LVNSLGELMGINTL T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIK 1sotA 298 :IQVNDLIISVDNKPAI T0288 66 :TKVEVAKMIQEV 1sotA 314 :SALETMDQVAEI T0288 78 :KGEVTIH 1sotA 328 :GSVIPVV T0288 87 :KLQYYK 1sotA 342 :LTLQVT Number of specific fragments extracted= 6 number of extra gaps= 0 total=2311 Number of alignments=635 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRS 1sotA 298 :IQVNDLIISVDNKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=2313 Number of alignments=636 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKGK 1sotA 298 :IQVNDLIISVDNKPAISA T0288 68 :VEVAKMIQEV 1sotA 316 :LETMDQVAEI Number of specific fragments extracted= 3 number of extra gaps= 0 total=2316 Number of alignments=637 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0288)K87 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKGK 1sotA 298 :IQVNDLIISVDNKPAISA T0288 68 :VEVAKMIQEVKGEVTIHYN 1sotA 316 :LETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2319 Number of alignments=638 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0288)C30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0288)K87 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0288 31 :LYIVQVFDNTPAALDG 1sotA 282 :IVVNEVSPDGPAANAG T0288 48 :VAAGDEITGVNGRSIKG 1sotA 298 :IQVNDLIISVDNKPAIS T0288 67 :KVEVAKMIQEVKGEVTIHYN 1sotA 315 :ALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2322 Number of alignments=639 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0288 read from 1g9oA/merged-local-a2m # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 1 :SMVPGKVTLQKDAQN 1g9oA 9 :RMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRL Number of specific fragments extracted= 4 number of extra gaps= 0 total=2326 Number of alignments=640 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 4 :PGKVTLQKDAQN 1g9oA 12 :PRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLL Number of specific fragments extracted= 4 number of extra gaps= 0 total=2330 Number of alignments=641 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 1 :SMVPGKVTLQKDAQN 1g9oA 9 :RMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRL Number of specific fragments extracted= 4 number of extra gaps= 0 total=2334 Number of alignments=642 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 4 :PGKVTLQKDAQN 1g9oA 12 :PRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYN 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2338 Number of alignments=643 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1g9oA 13 :RLCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2341 Number of alignments=644 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1g9oA 13 :RLCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2344 Number of alignments=645 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 4 :PGKVTLQK 1g9oA 12 :PRLCCLEK T0288 13 :AQNLIGISIGGGAQ 1g9oA 20 :GPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALD 1g9oA 34 :KLGQYIRLVEPGSPAEKA T0288 47 :TVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1g9oA 52 :GLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2348 Number of alignments=646 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 1 :SMVPGKVTLQKDAQN 1g9oA 9 :RMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYY 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETD Number of specific fragments extracted= 4 number of extra gaps= 0 total=2352 Number of alignments=647 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 2 :MVPGKVTLQKDAQN 1g9oA 10 :MLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDP Number of specific fragments extracted= 4 number of extra gaps= 0 total=2356 Number of alignments=648 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 1 :SMVPGKVTLQKDAQN 1g9oA 9 :RMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=2360 Number of alignments=649 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 2 :MVPGKVTLQKDAQN 1g9oA 10 :MLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=2364 Number of alignments=650 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 1 :SMVPGKVTLQKDAQN 1g9oA 9 :RMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLL T0288 85 :YN 1g9oA 93 :PE Number of specific fragments extracted= 5 number of extra gaps= 0 total=2369 Number of alignments=651 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 2 :MVPGKVTLQKDAQN 1g9oA 10 :MLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLL T0288 85 :YN 1g9oA 93 :PE Number of specific fragments extracted= 5 number of extra gaps= 0 total=2374 Number of alignments=652 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 1 :SMVPGKVTLQKDAQN 1g9oA 9 :RMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLL T0288 85 :YNKL 1g9oA 93 :PETD T0288 91 :YK 1g9oA 97 :EQ Number of specific fragments extracted= 6 number of extra gaps= 0 total=2380 Number of alignments=653 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 1 :SMVPGKVTLQKDAQN 1g9oA 9 :RMLPRLCCLEKGPNG T0288 17 :IGISIGGGAQ 1g9oA 24 :YGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLL T0288 85 :YNKL 1g9oA 93 :PETD Number of specific fragments extracted= 5 number of extra gaps= 0 total=2385 Number of alignments=654 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 7 :VTLQKDAQNLIGISIGGGAQ 1g9oA 14 :LCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2388 Number of alignments=655 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 6 :KVTLQKDAQNLIGISIGGGAQ 1g9oA 13 :RLCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHY 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2391 Number of alignments=656 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 3 :VPGKVTLQKDAQNLIGISIGGGAQ 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2394 Number of alignments=657 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0288 4 :PGKVTLQKDAQNLIGISIGGGAQ 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEKG T0288 28 :CPCLYIVQVFDNTPAALDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQYYKV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2397 Number of alignments=658 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1y8tA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1y8tA expands to /projects/compbio/data/pdb/1y8t.pdb.gz 1y8tA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0288 read from 1y8tA/merged-local-a2m # 1y8tA read from 1y8tA/merged-local-a2m # adding 1y8tA to template set # found chain 1y8tA in template set Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0288)V77 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0288 31 :LYIVQVFDN 1y8tA 244 :AKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKGKTKVEVAKMIQ 1y8tA 274 :INSADALVAAVRSK T0288 78 :KGEVTIHY 1y8tA 290 :GATVALTF Number of specific fragments extracted= 5 number of extra gaps= 4 total=2402 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0288)V77 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0288 16 :LIGISIGG 1y8tA 180 :LVGVNSAI T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKGKTKVEVAKMIQ 1y8tA 274 :INSADALVAAVRSK T0288 78 :KGEVTIH 1y8tA 290 :GATVALT Number of specific fragments extracted= 6 number of extra gaps= 4 total=2408 Number of alignments=659 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0288)V77 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0288 31 :LYIVQVFDN 1y8tA 244 :AKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKGKTKVEVAKMIQ 1y8tA 274 :INSADALVAAVRSK T0288 78 :KGEVTIHY 1y8tA 290 :GATVALTF Number of specific fragments extracted= 5 number of extra gaps= 4 total=2413 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0288)V77 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKGKTKVEVAKMIQ 1y8tA 274 :INSADALVAAVRSK T0288 78 :KGEVTIHY 1y8tA 290 :GATVALTF Number of specific fragments extracted= 5 number of extra gaps= 4 total=2418 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)K11 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0288)D12 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0288)A13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)Y27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0288)V77 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0288)K87 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0288)L88 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 T0288 14 :QNLIGISIG 1y8tA 228 :HASLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKGKTKVEVAKMIQ 1y8tA 274 :INSADALVAAVRSK T0288 78 :KGEVTIHYN 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 7 total=2424 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)K11 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0288)D12 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0288)A13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)Y27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0288)V77 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0288)K87 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0288)L88 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 T0288 14 :QNLIGISIG 1y8tA 228 :HASLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKGKTKVEVAKMIQ 1y8tA 274 :INSADALVAAVRSK T0288 78 :KGEVTIHYN 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 7 total=2430 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)Y27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)C28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)K87 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0288)L88 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0288)Q89 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0288 16 :LIGISIG 1y8tA 230 :SLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKG 1y8tA 274 :INS T0288 67 :KVEVAKMIQEV 1y8tA 277 :ADALVAAVRSK T0288 78 :KGEVTIHYN 1y8tA 290 :GATVALTFQ T0288 90 :YY 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 5 total=2438 Number of alignments=660 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)Y27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)K87 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0288)L88 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0288)Q89 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0288 16 :LIGISIG 1y8tA 230 :SLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKG 1y8tA 274 :INS T0288 67 :KVEVAKMIQEV 1y8tA 277 :ADALVAAVRSK T0288 78 :KGEVTIHYN 1y8tA 290 :GATVALTFQ T0288 90 :YY 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 5 total=2446 Number of alignments=661 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)K11 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0288)D12 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0288)A13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0288)V77 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0288 14 :QNLIGISIG 1y8tA 228 :HASLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKGKTKVEVAKMIQ 1y8tA 274 :INSADALVAAVRSK T0288 78 :KGEVTIH 1y8tA 290 :GATVALT Number of specific fragments extracted= 6 number of extra gaps= 6 total=2452 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)K11 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0288)D12 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0288)A13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)E76 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0288)V77 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 T0288 14 :QNLIGISIG 1y8tA 228 :HASLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKGKTKVEVAKMIQ 1y8tA 274 :INSADALVAAVRSK T0288 78 :KGEVTIH 1y8tA 290 :GATVALT Number of specific fragments extracted= 6 number of extra gaps= 6 total=2458 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)N86 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0288 16 :LIGISIG 1y8tA 230 :SLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKG 1y8tA 274 :INS T0288 67 :KVEVAKMIQEV 1y8tA 277 :ADALVAAVRSK T0288 78 :KGEVTIH 1y8tA 290 :GATVALT T0288 87 :K 1y8tA 302 :G Number of specific fragments extracted= 8 number of extra gaps= 5 total=2466 Number of alignments=662 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 T0288 16 :LIGISIG 1y8tA 230 :SLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKG 1y8tA 274 :INS T0288 67 :KVEVAKMIQEV 1y8tA 277 :ADALVAAVRSK T0288 78 :KGEVTIH 1y8tA 290 :GATVALT T0288 89 :Q 1y8tA 304 :S Number of specific fragments extracted= 8 number of extra gaps= 4 total=2474 Number of alignments=663 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)K11 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0288)D12 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0288)A13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 T0288 14 :QNLIGISIG 1y8tA 228 :HASLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :I 1y8tA 274 :I Number of specific fragments extracted= 5 number of extra gaps= 5 total=2479 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)Q10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)G224 Warning: unaligning (T0288)K11 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0288)D12 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0288)A13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 T0288 14 :QNLIGISIG 1y8tA 228 :HASLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKGKTK 1y8tA 274 :INSADA Number of specific fragments extracted= 5 number of extra gaps= 5 total=2484 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)V77 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0288)K87 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0288)L88 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0288)Q89 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0288 16 :LIGISIG 1y8tA 230 :SLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKG 1y8tA 274 :INS T0288 67 :KVEVAKMIQE 1y8tA 277 :ADALVAAVRS T0288 78 :KGEVTIHYN 1y8tA 290 :GATVALTFQ T0288 90 :YYK 1y8tA 302 :GGS Number of specific fragments extracted= 8 number of extra gaps= 6 total=2492 Number of alignments=664 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0288)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0288)G24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0288)A25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0288)Q26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0288)C28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0288)P29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0288)T40 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0288)P41 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0288)L44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0288)D45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0288)G46 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0288)V48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0288)G59 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0288)R60 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0288)S61 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0288)K78 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0288)G79 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0288)Q89 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0288)Y90 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0288)Y91 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0288 16 :LIGISIG 1y8tA 230 :SLGVQVT T0288 30 :CLYIVQVFDN 1y8tA 243 :GAKIVEVVAG T0288 42 :AA 1y8tA 255 :AA T0288 49 :AAGDEITGVN 1y8tA 261 :PKGVVVTKVD T0288 62 :IKG 1y8tA 274 :INS T0288 67 :KVEVAKMIQEV 1y8tA 277 :ADALVAAVRSK T0288 80 :EVTIHYNKL 1y8tA 290 :GATVALTFQ T0288 92 :K 1y8tA 302 :G Number of specific fragments extracted= 8 number of extra gaps= 6 total=2500 Number of alignments=665 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ky9A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ky9A expands to /projects/compbio/data/pdb/1ky9.pdb.gz 1ky9A:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0288 read from 1ky9A/merged-local-a2m # 1ky9A read from 1ky9A/merged-local-a2m # adding 1ky9A to template set # found chain 1ky9A in template set Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9A)P231 T0288 15 :NLIGISIGGG 1ky9A 220 :ELIGINTAIL T0288 26 :QYCPCLYIVQVFDNTPAALDG 1ky9A 283 :DAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTL Number of specific fragments extracted= 3 number of extra gaps= 1 total=2503 Number of alignments=666 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9A)P231 T0288 17 :IGISIGGG 1ky9A 222 :IGINTAIL T0288 26 :QYCPCLYIVQVFDNTPAALDG 1ky9A 283 :DAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIH 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLG Number of specific fragments extracted= 3 number of extra gaps= 1 total=2506 Number of alignments=667 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0288 24 :GAQYCPCLYIVQVFDNTPAALDG 1ky9A 281 :KVDAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQ 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2508 Number of alignments=668 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0288 30 :CLYIVQVFDNTPAALDG 1ky9A 287 :GAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRD Number of specific fragments extracted= 2 number of extra gaps= 0 total=2510 Number of alignments=669 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0288 24 :GAQYCPCLYIVQVFDNTPAALDG 1ky9A 281 :KVDAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGK 1ky9A 304 :IKAGDVITSLNGKPISSF T0288 72 :KMIQEV 1ky9A 322 :AALRAQ T0288 78 :KGEVTIHYNKLQY 1ky9A 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 4 number of extra gaps= 0 total=2514 Number of alignments=670 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0288 30 :CLYIVQVFDNTPAALDG 1ky9A 287 :GAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGK 1ky9A 304 :IKAGDVITSLNGKPISSF T0288 68 :VEVAKMIQEV 1ky9A 322 :AALRAQVGTM T0288 78 :KGEVTIHYNKLQY 1ky9A 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 4 number of extra gaps= 0 total=2518 Number of alignments=671 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0288 24 :GAQYCPCLYIVQVFDNTPAALDG 1ky9A 281 :KVDAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVA 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=2520 Number of alignments=672 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0288 26 :QYCPCLYIVQVFDNTPAALDG 1ky9A 283 :DAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVA 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=2522 Number of alignments=673 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0288 24 :GAQYCPCLYIVQVFDNTPAALDG 1ky9A 281 :KVDAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGK 1ky9A 304 :IKAGDVITSLNGKPISSF T0288 72 :KMIQEV 1ky9A 322 :AALRAQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2525 Number of alignments=674 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set Warning: unaligning (T0288)A25 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9A)P231 Warning: unaligning (T0288)Q26 because of BadResidue code BAD_PEPTIDE at template residue (1ky9A)P231 T0288 10 :QKDAQNLIGISIGGG 1ky9A 215 :VNLNGELIGINTAIL T0288 27 :YCP 1ky9A 232 :DGG T0288 30 :CLYIVQVFDNTPAALDG 1ky9A 287 :GAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGK 1ky9A 304 :IKAGDVITSLNGKPISSF T0288 68 :VEVAKMIQEV 1ky9A 322 :AALRAQVGTM T0288 78 :KGEVTIH 1ky9A 334 :GSKLTLG T0288 85 :YNKLQ 1ky9A 343 :RDGKQ Number of specific fragments extracted= 7 number of extra gaps= 1 total=2532 Number of alignments=675 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set Warning: unaligning (T0288)G18 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9A)I267 Warning: unaligning (T0288)I19 because of BadResidue code BAD_PEPTIDE at template residue (1ky9A)I267 T0288 15 :NLI 1ky9A 263 :GEL T0288 20 :SIGGGAQ 1ky9A 268 :MGTELNS T0288 27 :YCPCLYIVQVFDNTPAALDG 1ky9A 284 :AQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTKVEVA 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=2536 Number of alignments=676 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0288 27 :YCPCLYIVQVFDNTPAALDG 1ky9A 284 :AQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGKTK 1ky9A 304 :IKAGDVITSLNGKPISSFAA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2538 Number of alignments=677 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0288 25 :AQYCPCLYIVQVFDNTPAALDG 1ky9A 282 :VDAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGK 1ky9A 304 :IKAGDVITSLNGKPISSF T0288 72 :KMIQEVKGE 1ky9A 322 :AALRAQVGT Number of specific fragments extracted= 3 number of extra gaps= 0 total=2541 Number of alignments=678 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0288 24 :GAQYCPCLYIVQVFDNTPAALDG 1ky9A 281 :KVDAQRGAFVSQVLPNSSAAKAG T0288 48 :VAAGDEITGVNGRSIKGK 1ky9A 304 :IKAGDVITSLNGKPISSF T0288 68 :VEVAKMIQEVKGEVTIHYNKLQYY 1ky9A 322 :AALRAQVGTMPVGSKLTLGLLRDG Number of specific fragments extracted= 3 number of extra gaps= 0 total=2544 Number of alignments=679 # command:NUMB_ALIGNS: 679 evalue: 0 0.0000, weight 30.6563 evalue: 1 0.0000, weight 30.3564 evalue: 2 0.0000, weight 29.9808 evalue: 3 0.0000, weight 29.8181 evalue: 4 0.0000, weight 29.3603 evalue: 5 0.0000, weight 24.4043 evalue: 6 0.0000, weight 24.3475 evalue: 7 0.0000, weight 22.6082 evalue: 8 0.0000, weight 18.1511 evalue: 9 0.0000, weight 14.8448 evalue: 10 0.0000, weight 38.0507 evalue: 11 0.0000, weight 17.4400 evalue: 12 7.9156, weight 0.1965 evalue: 13 8.1521, weight 0.1913 evalue: 14 9.0407, weight 0.1740 evalue: 15 9.3852, weight 0.1681 evalue: 16 10.2420, weight 0.1551 evalue: 17 10.6890, weight 0.1491 evalue: 18 11.3400, weight 0.1411 evalue: 19 11.4670, weight 0.1396 evalue: 20 0.0000, weight 32.2937 evalue: 21 0.0000, weight 31.5541 evalue: 22 0.0000, weight 31.1126 evalue: 23 0.0000, weight 29.9714 evalue: 24 0.0000, weight 25.5499 evalue: 25 0.0000, weight 25.4095 evalue: 26 0.0000, weight 25.3754 evalue: 27 0.0000, weight 25.3132 evalue: 28 0.0000, weight 22.5463 evalue: 29 0.0000, weight 19.1475 evalue: 30 0.0000, weight 33.0010 evalue: 31 0.0000, weight 21.8828 evalue: 32 0.0000, weight 21.4079 evalue: 33 0.0000, weight 21.0025 evalue: 34 0.0000, weight 17.2190 evalue: 35 0.0000, weight 17.1329 evalue: 36 0.0000, weight 16.8761 evalue: 37 0.0000, weight 15.4847 evalue: 38 0.0000, weight 12.1364 evalue: 39 0.0000, weight 10.5037 evalue: 40 0.1754, weight 2.3792 evalue: 41 0.1754, weight 2.3792 evalue: 42 0.1754, weight 2.3792 evalue: 43 0.1754, weight 2.3792 evalue: 44 0.1754, weight 2.3792 evalue: 45 0.1754, weight 2.3792 evalue: 46 0.1754, weight 2.3792 evalue: 47 0.1754, weight 2.3792 evalue: 48 0.1754, weight 2.3792 evalue: 49 0.1754, weight 2.3792 evalue: 50 0.1754, weight 2.3792 evalue: 51 0.1754, weight 2.3792 evalue: 52 0.1754, weight 2.3792 evalue: 53 0.1754, weight 2.3792 evalue: 54 0.6222, weight 1.3248 evalue: 55 0.6222, weight 1.3248 evalue: 56 0.6222, weight 1.3248 evalue: 57 0.6222, weight 1.3248 evalue: 58 0.6222, weight 1.3248 evalue: 59 0.6222, weight 1.3248 evalue: 60 0.0000, weight 12.7883 evalue: 61 0.0000, weight 12.7883 evalue: 62 0.0000, weight 12.7883 evalue: 63 0.0000, weight 12.7883 evalue: 64 0.0000, weight 12.7883 evalue: 65 0.0000, weight 12.7883 evalue: 66 0.0000, weight 12.7883 evalue: 67 0.0000, weight 12.7883 evalue: 68 0.0000, weight 12.7883 evalue: 69 0.0000, weight 12.7883 evalue: 70 0.0000, weight 12.7883 evalue: 71 0.0000, weight 12.7883 evalue: 72 0.0000, weight 12.7883 evalue: 73 0.0000, weight 12.7883 evalue: 74 0.0000, weight 12.7883 evalue: 75 0.0000, weight 11.0674 evalue: 76 0.0000, weight 11.0674 evalue: 77 0.0000, weight 11.0674 evalue: 78 0.0000, weight 11.0674 evalue: 79 0.0000, weight 11.0674 evalue: 80 0.0000, weight 11.0674 evalue: 81 0.0000, weight 11.0674 evalue: 82 0.0000, weight 11.0674 evalue: 83 0.0000, weight 11.0674 evalue: 84 0.0000, weight 11.0674 evalue: 85 0.0000, weight 11.0674 evalue: 86 0.0000, weight 11.0674 evalue: 87 0.0000, weight 11.0674 evalue: 88 0.0000, weight 11.0674 evalue: 89 0.8263, weight 1.1248 evalue: 90 0.8263, weight 1.1248 evalue: 91 0.8263, weight 1.1248 evalue: 92 0.8263, weight 1.1248 evalue: 93 0.0000, weight 20.8763 evalue: 94 0.0000, weight 20.8763 evalue: 95 0.0000, weight 20.8763 evalue: 96 0.0000, weight 20.8763 evalue: 97 0.0000, weight 20.8763 evalue: 98 0.0000, weight 20.8763 evalue: 99 0.0000, weight 20.8763 evalue: 100 0.0000, weight 20.8763 evalue: 101 0.0000, weight 20.8763 evalue: 102 0.0000, weight 20.8763 evalue: 103 0.0000, weight 20.8763 evalue: 104 0.0000, weight 20.8763 evalue: 105 0.0000, weight 20.8763 evalue: 106 0.0000, weight 20.8763 evalue: 107 0.0000, weight 20.8763 evalue: 108 0.0000, weight 20.8763 evalue: 109 0.0000, weight 20.8763 evalue: 110 0.0000, weight 12.1520 evalue: 111 0.0000, weight 12.1520 evalue: 112 0.0000, weight 12.1520 evalue: 113 0.0000, weight 12.1520 evalue: 114 0.0000, weight 12.1520 evalue: 115 0.0000, weight 12.1520 evalue: 116 0.0000, weight 12.1520 evalue: 117 0.0000, weight 12.1520 evalue: 118 0.0000, weight 12.1520 evalue: 119 0.0000, weight 12.1520 evalue: 120 0.0000, weight 12.1520 evalue: 121 0.0000, weight 12.1520 evalue: 122 0.0000, weight 12.1520 evalue: 123 0.0000, weight 12.1520 evalue: 124 0.0000, weight 12.1520 evalue: 125 0.0000, weight 15.2529 evalue: 126 0.0000, weight 15.2529 evalue: 127 0.0000, weight 15.2529 evalue: 128 0.0000, weight 15.2529 evalue: 129 0.0000, weight 15.2529 evalue: 130 0.0000, weight 15.2529 evalue: 131 0.0000, weight 15.2529 evalue: 132 0.0000, weight 15.2529 evalue: 133 0.0000, weight 15.2529 evalue: 134 0.0000, weight 15.2529 evalue: 135 0.0000, weight 15.2529 evalue: 136 0.0000, weight 15.2529 evalue: 137 0.0000, weight 15.2529 evalue: 138 0.0000, weight 15.2529 evalue: 139 0.0000, weight 15.2529 evalue: 140 0.0000, weight 16.8761 evalue: 141 0.0000, weight 16.8761 evalue: 142 0.0000, weight 16.8761 evalue: 143 0.0000, weight 16.8761 evalue: 144 0.0000, weight 16.8761 evalue: 145 0.0000, weight 16.8761 evalue: 146 0.0000, weight 16.8761 evalue: 147 0.0000, weight 16.8761 evalue: 148 0.0000, weight 16.8761 evalue: 149 0.0000, weight 16.8761 evalue: 150 0.0000, weight 16.8761 evalue: 151 0.0000, weight 16.8761 evalue: 152 0.0000, weight 16.8761 evalue: 153 0.0000, weight 16.8761 evalue: 154 0.0000, weight 16.8761 evalue: 155 0.0000, weight 16.8761 evalue: 156 0.0000, weight 16.8761 evalue: 157 0.0000, weight 16.8761 evalue: 158 0.0000, weight 16.8761 evalue: 159 0.0000, weight 20.0580 evalue: 160 0.0000, weight 20.0580 evalue: 161 0.0000, weight 20.0580 evalue: 162 0.0000, weight 20.0580 evalue: 163 0.0000, weight 20.0580 evalue: 164 0.0000, weight 20.0580 evalue: 165 0.0000, weight 20.0580 evalue: 166 0.0000, weight 20.0580 evalue: 167 0.0000, weight 20.0580 evalue: 168 0.0000, weight 20.0580 evalue: 169 0.0000, weight 20.0580 evalue: 170 0.0000, weight 20.0580 evalue: 171 0.0000, weight 20.0580 evalue: 172 0.0000, weight 20.0580 evalue: 173 0.0000, weight 20.0580 evalue: 174 0.0000, weight 20.0580 evalue: 175 0.0000, weight 16.3426 evalue: 176 0.0000, weight 16.3426 evalue: 177 0.0000, weight 16.3426 evalue: 178 0.0000, weight 16.3426 evalue: 179 0.0000, weight 16.3426 evalue: 180 0.0000, weight 16.3426 evalue: 181 0.0000, weight 16.3426 evalue: 182 0.0000, weight 16.3426 evalue: 183 0.0000, weight 16.3426 evalue: 184 0.0000, weight 16.3426 evalue: 185 0.0000, weight 16.3426 evalue: 186 0.0000, weight 16.3426 evalue: 187 0.0000, weight 16.3426 evalue: 188 0.0000, weight 16.3426 evalue: 189 0.0000, weight 16.3426 evalue: 190 0.0000, weight 16.3426 evalue: 191 0.0000, weight 22.8319 evalue: 192 0.0000, weight 22.8319 evalue: 193 0.0000, weight 22.8319 evalue: 194 0.0000, weight 22.8319 evalue: 195 0.0000, weight 22.8319 evalue: 196 0.0000, weight 22.8319 evalue: 197 0.0000, weight 22.8319 evalue: 198 0.0000, weight 22.8319 evalue: 199 0.0000, weight 22.8319 evalue: 200 0.0000, weight 22.8319 evalue: 201 0.0000, weight 22.8319 evalue: 202 0.0000, weight 22.8319 evalue: 203 0.0000, weight 22.8319 evalue: 204 0.0000, weight 22.8319 evalue: 205 0.0000, weight 22.8319 evalue: 206 0.0000, weight 22.8319 evalue: 207 0.0000, weight 22.8319 evalue: 208 0.0000, weight 22.8319 evalue: 209 0.6597, weight 1.2822 evalue: 210 0.6597, weight 1.2822 evalue: 211 0.6597, weight 1.2822 evalue: 212 0.6597, weight 1.2822 evalue: 213 0.6597, weight 1.2822 evalue: 214 0.6597, weight 1.2822 evalue: 215 0.6054, weight 1.3450 evalue: 216 0.6054, weight 1.3450 evalue: 217 0.6054, weight 1.3450 evalue: 218 0.6054, weight 1.3450 evalue: 219 0.6054, weight 1.3450 evalue: 220 0.6054, weight 1.3450 evalue: 221 0.0000, weight 21.8828 evalue: 222 0.0000, weight 21.8828 evalue: 223 0.0000, weight 21.8828 evalue: 224 0.0000, weight 21.8828 evalue: 225 0.0000, weight 21.8828 evalue: 226 0.0000, weight 21.8828 evalue: 227 0.0000, weight 21.8828 evalue: 228 0.0000, weight 21.8828 evalue: 229 0.0000, weight 21.8828 evalue: 230 0.0000, weight 21.8828 evalue: 231 0.0000, weight 21.8828 evalue: 232 0.0000, weight 21.8828 evalue: 233 0.0000, weight 21.8828 evalue: 234 0.0000, weight 21.8828 evalue: 235 0.0000, weight 21.8828 evalue: 236 0.0000, weight 21.8828 evalue: 237 0.0000, weight 17.1329 evalue: 238 0.0000, weight 17.1329 evalue: 239 0.0000, weight 17.1329 evalue: 240 0.0000, weight 17.1329 evalue: 241 0.0000, weight 17.1329 evalue: 242 0.0000, weight 17.1329 evalue: 243 0.0000, weight 17.1329 evalue: 244 0.0000, weight 17.1329 evalue: 245 0.0000, weight 17.1329 evalue: 246 0.0000, weight 17.1329 evalue: 247 0.0000, weight 17.1329 evalue: 248 0.0000, weight 17.1329 evalue: 249 0.0000, weight 17.1329 evalue: 250 0.0000, weight 17.1329 evalue: 251 0.0000, weight 17.1329 evalue: 252 0.0000, weight 17.1329 evalue: 253 0.0000, weight 12.1364 evalue: 254 0.0000, weight 12.1364 evalue: 255 0.0000, weight 12.1364 evalue: 256 0.0000, weight 12.1364 evalue: 257 0.0000, weight 12.1364 evalue: 258 0.0000, weight 12.1364 evalue: 259 0.0000, weight 12.1364 evalue: 260 0.0000, weight 12.1364 evalue: 261 0.0000, weight 12.1364 evalue: 262 0.0000, weight 12.1364 evalue: 263 0.0000, weight 12.1364 evalue: 264 0.0000, weight 12.1364 evalue: 265 0.0000, weight 12.1364 evalue: 266 0.0000, weight 12.1364 evalue: 267 0.0000, weight 12.1364 evalue: 268 0.0000, weight 29.8632 evalue: 269 0.0000, weight 29.8632 evalue: 270 0.0000, weight 29.8632 evalue: 271 0.0000, weight 29.8632 evalue: 272 0.0000, weight 29.8632 evalue: 273 0.0000, weight 29.8632 evalue: 274 0.0000, weight 29.8632 evalue: 275 0.0000, weight 29.8632 evalue: 276 0.0000, weight 29.8632 evalue: 277 0.0000, weight 29.8632 evalue: 278 0.0000, weight 29.8632 evalue: 279 0.0000, weight 29.8632 evalue: 280 0.0000, weight 29.8632 evalue: 281 0.0000, weight 29.8632 evalue: 282 0.0000, weight 29.8632 evalue: 283 0.0000, weight 29.8632 evalue: 284 0.0000, weight 29.8632 evalue: 285 0.0000, weight 29.8632 evalue: 286 0.0000, weight 28.8778 evalue: 287 0.0000, weight 28.8778 evalue: 288 0.0000, weight 28.8778 evalue: 289 0.0000, weight 28.8778 evalue: 290 0.0000, weight 28.8778 evalue: 291 0.0000, weight 28.8778 evalue: 292 0.0000, weight 28.8778 evalue: 293 0.0000, weight 28.8778 evalue: 294 0.0000, weight 28.8778 evalue: 295 0.0000, weight 28.8778 evalue: 296 0.0000, weight 28.8778 evalue: 297 0.0000, weight 28.8778 evalue: 298 0.0000, weight 28.8778 evalue: 299 0.0000, weight 28.8778 evalue: 300 0.0000, weight 28.8778 evalue: 301 0.0000, weight 28.8778 evalue: 302 0.0000, weight 28.8778 evalue: 303 0.0000, weight 28.8778 evalue: 304 1.6670, weight 0.7084 evalue: 305 1.6670, weight 0.7084 evalue: 306 1.6670, weight 0.7084 evalue: 307 1.6670, weight 0.7084 evalue: 308 1.6670, weight 0.7084 evalue: 309 1.6670, weight 0.7084 evalue: 310 0.6352, weight 1.3097 evalue: 311 0.6352, weight 1.3097 evalue: 312 0.6352, weight 1.3097 evalue: 313 0.6352, weight 1.3097 evalue: 314 0.6352, weight 1.3097 evalue: 315 0.6352, weight 1.3097 evalue: 316 0.0000, weight 11.3876 evalue: 317 0.0000, weight 11.3876 evalue: 318 0.0000, weight 11.3876 evalue: 319 0.0000, weight 11.3876 evalue: 320 0.0000, weight 11.3876 evalue: 321 0.0000, weight 11.3876 evalue: 322 0.0000, weight 11.3876 evalue: 323 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0.3503, weight 1.7759 evalue: 669 0.3503, weight 1.7759 evalue: 670 0.3503, weight 1.7759 evalue: 671 0.3503, weight 1.7759 evalue: 672 0.3503, weight 1.7759 evalue: 673 0.3503, weight 1.7759 evalue: 674 0.3503, weight 1.7759 evalue: 675 0.3503, weight 1.7759 evalue: 676 0.3503, weight 1.7759 evalue: 677 0.3503, weight 1.7759 evalue: 678 0.3503, weight 1.7759 RES2ATOM 0 2 RES2ATOM 1 8 RES2ATOM 2 16 RES2ATOM 3 23 RES2ATOM 5 34 RES2ATOM 6 43 RES2ATOM 7 50 RES2ATOM 8 57 RES2ATOM 9 65 RES2ATOM 10 74 RES2ATOM 11 83 RES2ATOM 12 91 RES2ATOM 13 96 RES2ATOM 14 105 RES2ATOM 15 113 RES2ATOM 16 121 RES2ATOM 18 133 RES2ATOM 19 141 RES2ATOM 20 147 RES2ATOM 24 167 RES2ATOM 25 172 RES2ATOM 26 181 RES2ATOM 27 193 RES2ATOM 28 199 RES2ATOM 29 206 RES2ATOM 30 212 RES2ATOM 31 220 RES2ATOM 32 232 RES2ATOM 33 240 RES2ATOM 34 247 RES2ATOM 35 256 RES2ATOM 36 263 RES2ATOM 37 274 RES2ATOM 38 282 RES2ATOM 39 290 RES2ATOM 40 297 RES2ATOM 41 304 RES2ATOM 42 309 RES2ATOM 43 314 RES2ATOM 44 322 RES2ATOM 46 334 RES2ATOM 47 341 RES2ATOM 48 348 RES2ATOM 49 353 RES2ATOM 51 362 RES2ATOM 52 370 RES2ATOM 53 379 RES2ATOM 54 387 RES2ATOM 56 398 RES2ATOM 57 405 RES2ATOM 59 417 RES2ATOM 60 428 RES2ATOM 61 434 RES2ATOM 62 442 RES2ATOM 64 455 RES2ATOM 65 464 RES2ATOM 66 471 RES2ATOM 67 480 RES2ATOM 68 487 RES2ATOM 69 496 RES2ATOM 70 503 RES2ATOM 71 508 RES2ATOM 72 517 RES2ATOM 73 525 RES2ATOM 74 533 RES2ATOM 75 542 RES2ATOM 76 551 RES2ATOM 77 558 RES2ATOM 79 571 RES2ATOM 80 580 RES2ATOM 81 587 RES2ATOM 82 594 RES2ATOM 83 602 RES2ATOM 84 612 RES2ATOM 85 624 RES2ATOM 86 632 RES2ATOM 87 641 RES2ATOM 88 649 RES2ATOM 89 658 RES2ATOM 90 670 RES2ATOM 91 682 RES2ATOM 92 691 Constraint 257 354 5.0096 6.2620 12.5240 694.0947 Constraint 233 354 4.5199 5.6499 11.2998 694.0947 Constraint 233 363 3.7686 4.7107 9.4214 692.9066 Constraint 257 342 4.6987 5.8734 11.7469 692.0209 Constraint 233 342 4.8872 6.1090 12.2180 691.9552 Constraint 233 380 5.4340 6.7925 13.5849 690.1674 Constraint 399 526 5.0240 6.2800 12.5599 683.8405 Constraint 233 349 5.5308 6.9135 13.8269 681.2620 Constraint 241 354 5.1412 6.4265 12.8530 679.1012 Constraint 399 518 4.1802 5.2253 10.4506 676.8871 Constraint 418 518 4.9160 6.1450 12.2901 676.1924 Constraint 142 241 3.8029 4.7536 9.5071 675.4208 Constraint 248 354 4.9654 6.2067 12.4135 675.3197 Constraint 142 233 5.6811 7.1014 14.2028 675.3002 Constraint 134 233 4.3267 5.4083 10.8167 675.3002 Constraint 142 248 3.4788 4.3485 8.6970 673.1290 Constraint 134 257 4.2703 5.3379 10.6759 673.0084 Constraint 221 371 4.4936 5.6170 11.2341 672.9914 Constraint 134 264 5.5242 6.9053 13.8106 672.6638 Constraint 148 241 5.0475 6.3094 12.6188 672.5811 Constraint 148 233 4.9019 6.1274 12.2548 672.5811 Constraint 148 380 5.5208 6.9010 13.8021 670.8303 Constraint 134 342 5.0408 6.3010 12.6019 670.1720 Constraint 221 380 5.7816 7.2270 14.4540 666.6720 Constraint 406 588 4.3541 5.4426 10.8852 665.2061 Constraint 406 581 5.0187 6.2733 12.5467 659.5321 Constraint 122 305 4.5107 5.6384 11.2768 659.5295 Constraint 221 363 5.4475 6.8094 13.6188 658.5836 Constraint 134 305 3.5879 4.4848 8.9696 656.8680 Constraint 213 380 3.8503 4.8128 9.6257 656.5231 Constraint 122 298 4.3776 5.4721 10.9441 656.0593 Constraint 406 552 4.8953 6.1192 12.2384 655.0514 Constraint 148 221 5.3382 6.6727 13.3454 654.9576 Constraint 134 248 5.3618 6.7022 13.4044 653.5283 Constraint 213 435 4.4771 5.5964 11.1927 649.0329 Constraint 213 371 5.5619 6.9524 13.9049 643.0676 Constraint 213 497 4.0903 5.1129 10.2257 638.9351 Constraint 122 526 5.3875 6.7344 13.4688 638.7636 Constraint 148 213 4.2387 5.2984 10.5967 636.9207 Constraint 399 581 5.2573 6.5717 13.1433 633.9114 Constraint 122 291 5.5427 6.9284 13.8568 633.5983 Constraint 213 472 5.3703 6.7129 13.4257 627.5218 Constraint 134 291 5.6893 7.1116 14.2231 625.6758 Constraint 380 497 5.5511 6.9388 13.8776 625.1781 Constraint 399 595 4.7009 5.8761 11.7521 617.3889 Constraint 122 581 5.0281 6.2851 12.5702 614.1563 Constraint 148 497 4.9969 6.2461 12.4923 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603 4.5608 5.7010 11.4021 422.4962 Constraint 35 595 5.7891 7.2363 14.4726 411.4972 Constraint 114 291 5.4609 6.8262 13.6524 396.7155 Constraint 114 298 5.7665 7.2082 14.4163 396.0069 Constraint 84 298 4.5973 5.7466 11.4932 389.4149 Constraint 134 241 6.2084 7.7604 15.5209 365.7495 Constraint 371 613 5.1087 6.3858 12.7717 365.2852 Constraint 51 323 5.3045 6.6306 13.2613 362.8834 Constraint 363 613 3.6508 4.5635 9.1270 361.3440 Constraint 106 298 5.4967 6.8709 13.7418 348.9972 Constraint 58 342 5.9854 7.4817 14.9634 348.1992 Constraint 399 603 6.1868 7.7335 15.4670 343.0957 Constraint 380 613 4.7332 5.9165 11.8330 342.6587 Constraint 388 613 5.3686 6.7107 13.4215 336.8089 Constraint 44 335 4.0141 5.0176 10.0351 335.4310 Constraint 142 264 6.0017 7.5021 15.0043 333.6984 Constraint 207 380 5.7024 7.1280 14.2560 319.2886 Constraint 24 388 5.4248 6.7810 13.5621 313.5795 Constraint 342 613 5.4528 6.8160 13.6319 313.0294 Constraint 75 552 5.4245 6.7806 13.5612 310.9213 Constraint 142 257 6.0995 7.6244 15.2488 306.4444 Constraint 371 625 3.7598 4.6997 9.3994 302.4842 Constraint 44 603 5.7949 7.2436 14.4871 300.3809 Constraint 363 625 5.4145 6.7681 13.5362 298.4792 Constraint 168 465 4.5117 5.6397 11.2794 291.4175 Constraint 388 625 4.6948 5.8685 11.7369 288.0739 Constraint 24 603 4.8560 6.0700 12.1400 284.2821 Constraint 44 613 5.0194 6.2742 12.5484 277.4311 Constraint 168 472 5.4530 6.8163 13.6326 270.4628 Constraint 363 633 4.6362 5.7952 11.5905 267.1877 Constraint 233 613 5.9968 7.4960 14.9921 267.1315 Constraint 106 291 5.1161 6.3951 12.7903 264.4300 Constraint 200 443 4.9647 6.2059 12.4117 252.1861 Constraint 75 559 5.5597 6.9496 13.8992 250.4654 Constraint 84 291 5.7479 7.1848 14.3696 241.6654 Constraint 114 264 5.7635 7.2044 14.4087 237.5896 Constraint 207 388 5.7736 7.2170 14.4339 233.9276 Constraint 207 435 5.5799 6.9749 13.9499 230.7242 Constraint 349 633 5.5834 6.9793 13.9585 214.9926 Constraint 122 552 6.0065 7.5082 15.0164 214.7840 Constraint 24 625 4.3294 5.4118 10.8236 213.6817 Constraint 207 456 5.7237 7.1547 14.3093 209.8378 Constraint 406 559 5.8733 7.3416 14.6832 207.1317 Constraint 35 613 5.6865 7.1081 14.2162 200.7206 Constraint 24 613 5.5809 6.9761 13.9522 197.5542 Constraint 66 323 5.3604 6.7005 13.4010 188.5889 Constraint 173 465 4.4229 5.5286 11.0573 186.9096 Constraint 371 633 5.9110 7.3888 14.7776 179.8606 Constraint 168 456 5.3594 6.6992 13.3984 176.7408 Constraint 380 526 6.2191 7.7738 15.5476 169.9936 Constraint 134 310 6.1606 7.7008 15.4015 154.9092 Constraint 371 642 5.1736 6.4670 12.9340 154.2275 Constraint 363 642 5.3709 6.7136 13.4272 153.4261 Constraint 92 298 5.3417 6.6771 13.3542 153.0500 Constraint 106 534 5.3403 6.6753 13.3507 151.9582 Constraint 97 298 4.8304 6.0380 12.0759 149.4998 Constraint 173 472 5.0381 6.2976 12.5953 145.8957 Constraint 194 443 5.3060 6.6325 13.2650 143.7336 Constraint 97 291 5.2815 6.6019 13.2038 135.4282 Constraint 44 305 6.0506 7.5632 15.1264 134.5895 Constraint 106 264 5.7326 7.1657 14.3314 132.4481 Constraint 406 595 5.5022 6.8778 13.7555 127.5666 Constraint 17 625 5.4491 6.8114 13.6228 124.9740 Constraint 66 315 5.8967 7.3708 14.7417 118.1184 Constraint 406 572 5.9303 7.4129 14.8257 116.9625 Constraint 9 625 5.3609 6.7011 13.4021 116.4612 Constraint 213 443 5.7487 7.1859 14.3718 115.4929 Constraint 182 472 4.7054 5.8817 11.7635 110.0342 Constraint 406 526 5.7389 7.1736 14.3473 107.3096 Constraint 58 315 6.1410 7.6762 15.3525 106.1023 Constraint 51 335 4.6650 5.8313 11.6626 105.8065 Constraint 84 581 5.5530 6.9413 13.8826 104.8979 Constraint 58 335 4.7683 5.9603 11.9207 103.4136 Constraint 84 572 5.4044 6.7555 13.5109 102.9916 Constraint 24 633 5.5662 6.9577 13.9154 101.2030 Constraint 66 595 5.6032 7.0040 14.0080 99.4239 Constraint 182 465 5.5795 6.9744 13.9488 99.2164 Constraint 66 588 5.0349 6.2936 12.5872 97.5346 Constraint 194 371 5.8019 7.2524 14.5049 97.2261 Constraint 84 559 5.3787 6.7233 13.4466 96.0407 Constraint 371 443 6.2079 7.7598 15.5196 91.5453 Constraint 298 581 6.2541 7.8176 15.6351 89.7632 Constraint 9 633 4.7350 5.9188 11.8376 87.7473 Constraint 335 613 6.1856 7.7319 15.4639 87.3618 Constraint 51 342 4.8664 6.0830 12.1661 86.5319 Constraint 75 291 6.0243 7.5304 15.0608 85.7092 Constraint 221 354 6.1160 7.6450 15.2901 85.5988 Constraint 134 526 5.8647 7.3309 14.6619 82.9382 Constraint 106 552 5.4726 6.8407 13.6815 81.4820 Constraint 349 642 5.4903 6.8629 13.7258 80.9470 Constraint 406 543 5.9332 7.4165 14.8329 80.7427 Constraint 66 305 5.0760 6.3450 12.6901 79.5173 Constraint 388 595 6.2476 7.8095 15.6190 79.4621 Constraint 17 633 4.3944 5.4930 10.9861 78.5713 Constraint 363 595 6.2943 7.8678 15.7357 78.4143 Constraint 106 526 5.8165 7.2706 14.5412 77.7684 Constraint 173 481 5.9655 7.4569 14.9138 77.5449 Constraint 207 465 5.3735 6.7169 13.4337 77.3948 Constraint 213 388 5.9655 7.4569 14.9137 76.3205 Constraint 349 613 5.6020 7.0025 14.0049 74.7302 Constraint 323 595 6.2386 7.7983 15.5965 73.1986 Constraint 114 552 5.9338 7.4172 14.8344 70.2847 Constraint 200 435 5.4187 6.7733 13.5467 69.6931 Constraint 200 465 5.7493 7.1866 14.3732 67.5785 Constraint 84 552 5.7075 7.1344 14.2688 65.7070 Constraint 51 613 5.2381 6.5476 13.0952 65.0951 Constraint 200 388 4.7788 5.9735 11.9470 64.3319 Constraint 213 504 5.7901 7.2376 14.4752 63.9461 Constraint 380 443 6.3199 7.8999 15.7998 62.9708 Constraint 200 371 4.0675 5.0844 10.1688 61.6643 Constraint 221 642 5.7431 7.1789 14.3578 61.1801 Constraint 92 581 5.4161 6.7701 13.5402 60.9337 Constraint 526 595 5.9781 7.4727 14.9453 58.7862 Constraint 106 283 5.6166 7.0208 14.0415 57.8840 Constraint 134 380 6.2071 7.7589 15.5178 57.5161 Constraint 380 625 6.1715 7.7144 15.4287 56.4598 Constraint 92 559 4.5659 5.7074 11.4147 56.0680 Constraint 200 456 5.8935 7.3668 14.7337 55.1920 Constraint 207 497 4.2967 5.3708 10.7417 55.0705 Constraint 200 380 5.3262 6.6578 13.3156 53.9206 Constraint 182 456 5.3234 6.6542 13.3084 53.2972 Constraint 75 305 5.1193 6.3992 12.7983 52.8553 Constraint 58 134 5.9683 7.4604 14.9208 52.3329 Constraint 92 552 5.4449 6.8061 13.6121 50.6264 Constraint 182 443 5.4893 6.8616 13.7233 50.4183 Constraint 200 472 5.9212 7.4015 14.8030 50.2029 Constraint 354 642 5.9709 7.4636 14.9272 49.9098 Constraint 114 534 5.2113 6.5141 13.0283 49.4061 Constraint 51 603 5.6127 7.0159 14.0318 47.8551 Constraint 435 526 6.3131 7.8913 15.7827 47.4012 Constraint 213 526 5.7020 7.1276 14.2551 47.3249 Constraint 114 526 5.2350 6.5437 13.0874 46.0923 Constraint 207 472 3.2446 4.0557 8.1114 46.0220 Constraint 75 588 6.1397 7.6747 15.3493 44.9072 Constraint 305 595 5.8759 7.3449 14.6899 43.3940 Constraint 9 642 4.9280 6.1600 12.3199 43.2285 Constraint 66 342 5.9500 7.4376 14.8751 43.1627 Constraint 66 335 5.8041 7.2551 14.5101 43.0739 Constraint 44 363 6.1916 7.7395 15.4790 41.6730 Constraint 122 595 5.6207 7.0259 14.0518 41.6007 Constraint 213 399 6.2440 7.8050 15.6099 41.4025 Constraint 418 552 5.6992 7.1240 14.2481 41.2038 Constraint 168 481 4.9376 6.1721 12.3441 41.1869 Constraint 168 443 4.9587 6.1984 12.3968 39.3022 Constraint 58 291 6.0562 7.5703 15.1406 38.6086 Constraint 75 323 5.4760 6.8450 13.6901 38.1615 Constraint 435 595 6.0220 7.5276 15.0551 36.5519 Constraint 35 633 5.6897 7.1121 14.2242 36.5185 Constraint 134 595 6.2555 7.8194 15.6388 36.4222 Constraint 92 572 4.6925 5.8656 11.7312 36.3239 Constraint 134 298 5.9053 7.3816 14.7632 36.1293 Constraint 194 472 5.5111 6.8888 13.7777 35.7864 Constraint 335 595 5.7977 7.2471 14.4943 34.5745 Constraint 51 305 6.0289 7.5361 15.0722 34.3948 Constraint 122 264 6.2760 7.8451 15.6901 33.8070 Constraint 35 625 5.4013 6.7516 13.5032 33.7631 Constraint 435 603 6.2674 7.8343 15.6686 33.4594 Constraint 44 581 6.1936 7.7420 15.4839 33.4322 Constraint 35 335 5.1251 6.4063 12.8126 33.2085 Constraint 194 456 5.3243 6.6554 13.3109 33.1392 Constraint 213 465 5.8116 7.2645 14.5291 32.3257 Constraint 97 534 5.2570 6.5713 13.1425 32.0334 Constraint 207 625 6.0679 7.5849 15.1698 31.8298 Constraint 122 342 6.2303 7.7879 15.5758 31.6098 Constraint 66 559 5.6687 7.0858 14.1717 31.5295 Constraint 75 342 5.9388 7.4236 14.8471 31.1235 Constraint 142 354 5.6972 7.1215 14.2429 30.4586 Constraint 3 633 5.5429 6.9286 13.8571 30.4151 Constraint 9 650 5.5484 6.9355 13.8711 30.4083 Constraint 142 504 5.4008 6.7511 13.5021 29.3791 Constraint 207 642 5.7008 7.1259 14.2519 29.0431 Constraint 257 323 5.0878 6.3597 12.7194 29.0227 Constraint 92 291 5.6108 7.0135 14.0269 28.9185 Constraint 35 363 6.1598 7.6998 15.3995 27.7880 Constraint 173 371 5.4917 6.8646 13.7292 27.7484 Constraint 429 497 6.1520 7.6901 15.3801 27.7387 Constraint 418 526 4.2838 5.3548 10.7096 27.7387 Constraint 418 497 3.9334 4.9167 9.8335 27.7387 Constraint 148 435 5.2999 6.6249 13.2499 27.7387 Constraint 114 504 6.0175 7.5219 15.0438 27.2040 Constraint 122 399 6.1315 7.6644 15.3287 26.9146 Constraint 75 595 5.0673 6.3342 12.6683 26.7578 Constraint 168 371 4.2793 5.3492 10.6984 26.4991 Constraint 97 264 5.7834 7.2293 14.4586 26.4259 Constraint 418 543 6.3450 7.9312 15.8624 26.4176 Constraint 122 534 5.8430 7.3038 14.6076 26.1530 Constraint 194 388 5.3762 6.7203 13.4405 25.5758 Constraint 97 283 3.8385 4.7981 9.5962 24.8846 Constraint 106 559 5.3656 6.7071 13.4141 24.5830 Constraint 399 543 6.2577 7.8222 15.6444 24.2908 Constraint 168 241 4.7515 5.9394 11.8788 24.1576 Constraint 335 633 5.8329 7.2911 14.5821 23.9503 Constraint 380 456 6.2015 7.7518 15.5037 23.8246 Constraint 75 526 6.1099 7.6374 15.2749 22.2402 Constraint 168 380 5.9427 7.4284 14.8568 22.0180 Constraint 17 650 4.8236 6.0295 12.0590 21.8291 Constraint 75 335 5.1872 6.4840 12.9681 21.5196 Constraint 194 465 5.0301 6.2876 12.5753 21.4668 Constraint 3 642 5.7352 7.1690 14.3381 21.2288 Constraint 429 603 6.3355 7.9194 15.8388 21.2057 Constraint 97 559 4.5315 5.6644 11.3288 21.1105 Constraint 97 552 5.7568 7.1960 14.3920 20.9314 Constraint 58 613 4.9567 6.1959 12.3917 20.8486 Constraint 173 443 4.8493 6.0617 12.1234 20.7855 Constraint 182 371 5.5806 6.9757 13.9515 20.6757 Constraint 17 642 5.5042 6.8803 13.7606 20.2791 Constraint 168 363 5.6135 7.0168 14.0337 19.9152 Constraint 168 435 4.8491 6.0614 12.1228 19.8553 Constraint 84 315 6.0882 7.6103 15.2206 19.5926 Constraint 194 435 4.8191 6.0239 12.0479 19.5482 Constraint 122 559 4.5729 5.7162 11.4323 19.2719 Constraint 168 488 6.2313 7.7891 15.5782 19.1203 Constraint 213 488 6.0563 7.5703 15.1407 18.4403 Constraint 221 633 5.9505 7.4381 14.8762 18.0049 Constraint 92 315 5.6924 7.1155 14.2310 17.9975 Constraint 418 504 6.1639 7.7049 15.4098 17.7308 Constraint 9 659 5.3578 6.6972 13.3944 17.7250 Constraint 51 315 6.2368 7.7960 15.5919 17.6434 Constraint 264 342 6.3746 7.9683 15.9365 17.4937 Constraint 75 315 6.0529 7.5661 15.1322 16.4775 Constraint 66 291 4.5219 5.6524 11.3048 16.3204 Constraint 418 509 6.0860 7.6074 15.2149 16.1405 Constraint 58 406 5.4288 6.7860 13.5721 16.1405 Constraint 148 399 6.2131 7.7663 15.5327 15.6663 Constraint 24 642 5.0531 6.3164 12.6327 15.3243 Constraint 122 406 5.9698 7.4623 14.9246 15.3164 Constraint 354 613 6.0559 7.5699 15.1397 14.7535 Constraint 371 650 5.2705 6.5881 13.1762 14.3490 Constraint 84 323 6.2253 7.7816 15.5633 14.2136 Constraint 134 354 4.9869 6.2337 12.4673 14.0103 Constraint 3 625 5.3617 6.7021 13.4041 13.8759 Constraint 435 504 6.1894 7.7368 15.4736 13.7896 Constraint 24 650 5.3877 6.7346 13.4692 13.2306 Constraint 58 399 5.8478 7.3097 14.6194 12.8307 Constraint 58 603 5.8839 7.3549 14.7098 12.8013 Constraint 168 497 5.5273 6.9091 13.8182 12.4747 Constraint 168 354 6.3610 7.9512 15.9024 12.4023 Constraint 44 633 5.3429 6.6786 13.3573 12.3169 Constraint 194 625 5.6575 7.0719 14.1438 11.9505 Constraint 134 349 6.1972 7.7465 15.4930 11.8773 Constraint 371 671 5.5029 6.8787 13.7573 11.8607 Constraint 194 497 5.5498 6.9372 13.8744 11.7604 Constraint 200 625 5.9658 7.4572 14.9145 11.7094 Constraint 114 275 4.7696 5.9621 11.9241 11.5982 Constraint 84 275 5.4285 6.7856 13.5711 11.5982 Constraint 44 399 6.2991 7.8738 15.7477 11.5982 Constraint 92 283 4.4001 5.5001 11.0002 11.3004 Constraint 106 504 5.9506 7.4383 14.8765 11.2965 Constraint 35 388 6.1356 7.6695 15.3390 11.0738 Constraint 406 603 4.8399 6.0498 12.0997 10.7684 Constraint 97 543 6.0275 7.5344 15.0688 10.3130 Constraint 92 264 5.2869 6.6086 13.2172 10.2972 Constraint 75 406 5.1646 6.4558 12.9116 10.2972 Constraint 66 310 5.7515 7.1894 14.3788 10.2972 Constraint 51 406 5.6130 7.0162 14.0324 10.2972 Constraint 44 315 6.1160 7.6451 15.2901 10.2972 Constraint 241 472 6.3095 7.8869 15.7739 9.9848 Constraint 207 633 5.4936 6.8670 13.7340 9.8179 Constraint 349 625 5.0758 6.3448 12.6895 9.8028 Constraint 349 671 5.8132 7.2665 14.5330 9.6706 Constraint 200 429 5.1720 6.4650 12.9299 9.5586 Constraint 354 633 5.8344 7.2930 14.5861 9.3057 Constraint 3 650 4.8481 6.0601 12.1203 9.2880 Constraint 75 534 5.9662 7.4577 14.9154 8.9764 Constraint 173 497 5.5642 6.9553 13.9105 8.7330 Constraint 173 456 4.7578 5.9472 11.8944 8.7330 Constraint 58 552 6.2073 7.7591 15.5182 8.6576 Constraint 399 613 4.9790 6.2238 12.4475 8.4953 Constraint 106 543 5.3417 6.6771 13.3541 8.0212 Constraint 168 504 5.7402 7.1752 14.3504 7.9830 Constraint 122 588 4.6918 5.8648 11.7295 7.8406 Constraint 194 380 5.5061 6.8826 13.7652 7.7878 Constraint 44 625 5.8889 7.3611 14.7222 7.3982 Constraint 207 429 6.3093 7.8866 15.7732 7.3079 Constraint 182 388 5.5907 6.9884 13.9768 7.3079 Constraint 9 613 4.8654 6.0818 12.1636 7.1643 Constraint 92 543 5.5675 6.9594 13.9188 6.8753 Constraint 51 363 6.2149 7.7687 15.5373 6.8506 Constraint 35 349 5.7170 7.1462 14.2925 6.5948 Constraint 221 625 5.9954 7.4942 14.9885 6.4261 Constraint 418 488 6.2739 7.8423 15.6846 6.3848 Constraint 9 371 5.1949 6.4937 12.9874 6.3742 Constraint 9 671 5.1250 6.4062 12.8124 6.3065 Constraint 66 134 5.5906 6.9882 13.9764 6.1789 Constraint 84 526 6.0182 7.5228 15.0455 6.0157 Constraint 388 633 5.4513 6.8141 13.6282 6.0062 Constraint 51 298 4.8393 6.0492 12.0984 5.9881 Constraint 349 650 4.3606 5.4508 10.9015 5.9787 Constraint 51 122 4.8189 6.0237 12.0474 5.9416 Constraint 173 435 4.7209 5.9011 11.8022 5.8802 Constraint 84 406 5.1945 6.4931 12.9863 5.8433 Constraint 75 310 5.7777 7.2222 14.4443 5.8433 Constraint 66 406 5.2231 6.5289 13.0578 5.8433 Constraint 24 671 5.6197 7.0246 14.0493 5.8271 Constraint 17 613 5.3268 6.6585 13.3169 5.8085 Constraint 200 633 6.0288 7.5361 15.0721 5.7865 Constraint 388 642 4.7917 5.9897 11.9793 5.3595 Constraint 194 488 6.3433 7.9291 15.8582 5.2571 Constraint 194 481 6.3239 7.9049 15.8097 5.2571 Constraint 349 659 6.2457 7.8072 15.6143 5.2303 Constraint 399 488 5.5728 6.9660 13.9319 5.0242 Constraint 17 671 5.3223 6.6529 13.3057 4.8913 Constraint 168 625 4.5364 5.6705 11.3410 4.7731 Constraint 354 650 5.4743 6.8429 13.6858 4.6646 Constraint 354 625 5.8132 7.2665 14.5329 4.6378 Constraint 92 534 4.8700 6.0874 12.1749 4.5836 Constraint 84 543 5.5345 6.9181 13.8362 4.5836 Constraint 97 526 5.3894 6.7368 13.4735 4.4785 Constraint 207 671 6.0603 7.5754 15.1509 4.3734 Constraint 168 642 5.0767 6.3459 12.6919 4.3164 Constraint 114 559 5.5166 6.8958 13.7916 4.2772 Constraint 35 642 5.7589 7.1986 14.3972 4.1952 Constraint 443 692 4.8384 6.0480 12.0960 4.1564 Constraint 388 692 6.2052 7.7565 15.5130 4.1564 Constraint 207 613 6.0852 7.6065 15.2131 3.9407 Constraint 194 642 5.5750 6.9688 13.9376 3.9216 Constraint 241 671 5.4606 6.8257 13.6515 3.7616 Constraint 241 642 6.0611 7.5764 15.1528 3.7616 Constraint 221 671 5.1618 6.4523 12.9046 3.7616 Constraint 84 534 5.0586 6.3233 12.6465 3.7571 Constraint 24 659 5.2085 6.5106 13.0212 3.7489 Constraint 342 603 6.2496 7.8120 15.6240 3.6191 Constraint 399 504 4.0652 5.0815 10.1630 3.5644 Constraint 399 481 5.2214 6.5267 13.0535 3.5644 Constraint 380 481 5.0862 6.3577 12.7154 3.5644 Constraint 213 481 4.1435 5.1794 10.3588 3.5644 Constraint 221 613 6.0857 7.6071 15.2142 3.5060 Constraint 17 659 5.5598 6.9498 13.8996 3.3203 Constraint 399 559 6.2554 7.8192 15.6384 3.3178 Constraint 497 581 6.3869 7.9836 15.9673 3.1972 Constraint 221 456 5.3346 6.6682 13.3365 3.1970 Constraint 388 671 6.1547 7.6933 15.3866 3.1688 Constraint 35 342 4.9726 6.2158 12.4315 2.9708 Constraint 35 323 5.3270 6.6587 13.3174 2.9708 Constraint 3 613 4.2332 5.2916 10.5831 2.9705 Constraint 182 625 4.7758 5.9698 11.9396 2.8480 Constraint 106 581 5.1644 6.4556 12.9111 2.7897 Constraint 114 305 4.1847 5.2308 10.4617 2.7507 Constraint 114 283 6.0501 7.5627 15.1253 2.7195 Constraint 106 305 4.3163 5.3954 10.7908 2.6516 Constraint 406 613 6.2774 7.8467 15.6935 2.6456 Constraint 24 692 6.0567 7.5709 15.1418 2.5949 Constraint 66 399 6.3521 7.9401 15.8803 2.5471 Constraint 84 588 3.8243 4.7804 9.5607 2.4722 Constraint 66 552 5.5453 6.9316 13.8632 2.4269 Constraint 24 363 6.3364 7.9205 15.8410 2.4054 Constraint 24 335 5.5485 6.9357 13.8713 2.4054 Constraint 518 588 6.1185 7.6481 15.2962 2.2918 Constraint 148 207 5.5298 6.9123 13.8246 2.2918 Constraint 142 472 5.8123 7.2654 14.5309 2.2918 Constraint 142 221 4.3928 5.4910 10.9820 2.2918 Constraint 142 213 5.9296 7.4120 14.8240 2.2918 Constraint 134 504 5.5410 6.9262 13.8524 2.2918 Constraint 134 497 4.8489 6.0611 12.1222 2.2918 Constraint 134 472 4.6096 5.7620 11.5240 2.2918 Constraint 134 221 5.3342 6.6678 13.3355 2.2918 Constraint 134 213 4.5334 5.6667 11.3334 2.2918 Constraint 122 380 6.3256 7.9070 15.8140 2.2918 Constraint 122 257 4.8931 6.1164 12.2328 2.2918 Constraint 122 233 4.2289 5.2861 10.5722 2.2918 Constraint 114 315 6.2050 7.7563 15.5125 2.2918 Constraint 114 310 4.6506 5.8133 11.6266 2.2918 Constraint 114 257 4.6487 5.8109 11.6217 2.2918 Constraint 106 595 5.6722 7.0903 14.1805 2.2918 Constraint 97 504 6.0203 7.5254 15.0507 2.2918 Constraint 58 534 5.6299 7.0374 14.0747 2.2918 Constraint 51 534 5.4109 6.7636 13.5273 2.2918 Constraint 168 633 6.0016 7.5020 15.0041 2.2837 Constraint 35 581 6.2279 7.7849 15.5698 2.2658 Constraint 17 603 5.0026 6.2532 12.5064 2.2658 Constraint 509 581 5.7018 7.1272 14.2545 2.2585 Constraint 17 388 5.8726 7.3408 14.6816 2.2193 Constraint 371 659 5.3487 6.6859 13.3718 2.1325 Constraint 148 581 5.0436 6.3046 12.6091 2.1028 Constraint 148 305 4.5611 5.7013 11.4027 2.1028 Constraint 148 298 4.2658 5.3323 10.6645 2.1028 Constraint 148 291 6.0941 7.6176 15.2353 2.1028 Constraint 194 429 6.2824 7.8530 15.7059 2.1016 Constraint 9 194 5.4648 6.8310 13.6619 1.9608 Constraint 380 633 5.4049 6.7561 13.5122 1.9316 Constraint 264 354 3.8464 4.8080 9.6160 1.8383 Constraint 168 650 6.3437 7.9296 15.8592 1.8270 Constraint 122 221 6.0748 7.5936 15.1871 1.8270 Constraint 97 182 5.2175 6.5219 13.0437 1.8270 Constraint 399 509 5.7733 7.2167 14.4334 1.8046 Constraint 58 221 4.4604 5.5755 11.1511 1.7906 Constraint 58 213 4.6869 5.8586 11.7173 1.7906 Constraint 221 472 5.9390 7.4238 14.8476 1.7837 Constraint 233 642 6.2915 7.8644 15.7288 1.7509 Constraint 248 349 5.0884 6.3605 12.7210 1.7254 Constraint 399 625 6.2411 7.8014 15.6028 1.7151 Constraint 257 363 6.2475 7.8094 15.6188 1.6881 Constraint 233 456 6.3673 7.9591 15.9182 1.6881 Constraint 380 642 6.1996 7.7495 15.4990 1.6670 Constraint 335 603 5.5057 6.8821 13.7642 1.6481 Constraint 66 603 4.6030 5.7537 11.5075 1.6481 Constraint 406 504 5.6353 7.0441 14.0882 1.5896 Constraint 44 572 5.1182 6.3978 12.7956 1.5495 Constraint 66 534 6.1490 7.6862 15.3724 1.5030 Constraint 51 552 5.9103 7.3879 14.7757 1.5030 Constraint 122 497 5.9924 7.4905 14.9811 1.4606 Constraint 257 335 4.2501 5.3126 10.6252 1.4464 Constraint 92 173 5.3838 6.7297 13.4594 1.3702 Constraint 58 371 5.5379 6.9224 13.8447 1.3702 Constraint 58 207 4.0282 5.0352 10.0704 1.3702 Constraint 58 200 5.2895 6.6119 13.2238 1.3702 Constraint 58 182 5.3346 6.6683 13.3365 1.3702 Constraint 51 443 5.7597 7.1996 14.3992 1.3702 Constraint 51 213 4.6139 5.7674 11.5348 1.3702 Constraint 44 241 4.6077 5.7596 11.5192 1.3702 Constraint 44 221 3.8948 4.8686 9.7371 1.3702 Constraint 44 213 5.4294 6.7867 13.5735 1.3702 Constraint 221 650 5.5884 6.9855 13.9710 1.3628 Constraint 213 518 5.7687 7.2109 14.4218 1.3029 Constraint 388 683 6.2016 7.7520 15.5039 1.2556 Constraint 173 488 6.2110 7.7637 15.5274 1.2305 Constraint 9 683 4.2539 5.3174 10.6349 1.1633 Constraint 526 603 6.2211 7.7763 15.5527 1.1459 Constraint 305 603 5.6752 7.0940 14.1880 1.1459 Constraint 134 603 6.3017 7.8772 15.7543 1.1459 Constraint 122 603 5.6116 7.0145 14.0290 1.1459 Constraint 106 572 6.2404 7.8005 15.6009 1.1459 Constraint 504 581 4.6070 5.7588 11.5176 1.1300 Constraint 207 650 6.0836 7.6045 15.2091 1.1270 Constraint 122 182 5.9012 7.3766 14.7531 1.1097 Constraint 122 173 3.6749 4.5936 9.1873 1.1097 Constraint 207 659 6.2236 7.7795 15.5590 1.0934 Constraint 354 671 4.9091 6.1363 12.2727 1.0871 Constraint 443 683 4.8619 6.0774 12.1549 1.0391 Constraint 200 650 6.3591 7.9489 15.8978 1.0357 Constraint 363 650 5.8986 7.3732 14.7464 1.0108 Constraint 84 283 5.9285 7.4106 14.8212 0.9741 Constraint 3 671 4.9469 6.1836 12.3672 0.9168 Constraint 481 581 6.3869 7.9836 15.9673 0.9135 Constraint 399 472 5.5462 6.9327 13.8655 0.9135 Constraint 241 349 5.1468 6.4335 12.8670 0.9135 Constraint 233 335 4.8624 6.0780 12.1560 0.9135 Constraint 106 182 6.2587 7.8234 15.6468 0.9135 Constraint 106 173 6.3099 7.8873 15.7747 0.9135 Constraint 106 168 4.4992 5.6240 11.2479 0.9135 Constraint 51 481 6.3068 7.8835 15.7670 0.9135 Constraint 51 472 3.9012 4.8764 9.7529 0.9135 Constraint 44 472 5.5048 6.8811 13.7621 0.9135 Constraint 443 518 4.5617 5.7021 11.4042 0.8464 Constraint 17 371 5.1996 6.4995 12.9991 0.8293 Constraint 233 625 6.3903 7.9879 15.9757 0.8241 Constraint 114 595 6.3847 7.9808 15.9617 0.8241 Constraint 114 581 4.1785 5.2231 10.4461 0.8241 Constraint 114 406 6.0661 7.5826 15.1653 0.8241 Constraint 51 625 6.2280 7.7850 15.5700 0.8241 Constraint 17 683 4.9728 6.2160 12.4319 0.8241 Constraint 9 692 6.0133 7.5166 15.0331 0.8241 Constraint 3 683 5.1531 6.4414 12.8829 0.8241 Constraint 335 683 5.4470 6.8088 13.6176 0.7732 Constraint 9 335 5.3846 6.7308 13.4616 0.7732 Constraint 182 481 5.3829 6.7286 13.4572 0.7036 Constraint 354 659 6.1283 7.6604 15.3207 0.6932 Constraint 435 552 5.9365 7.4206 14.8413 0.6848 Constraint 84 305 6.0482 7.5603 15.1205 0.6798 Constraint 388 650 6.0585 7.5731 15.1461 0.6368 Constraint 363 659 5.1925 6.4907 12.9813 0.5643 Constraint 305 613 6.2532 7.8166 15.6331 0.5425 Constraint 233 595 6.3566 7.9457 15.8914 0.5336 Constraint 134 335 4.0128 5.0160 10.0320 0.5329 Constraint 122 335 6.0972 7.6215 15.2429 0.5329 Constraint 380 518 5.9812 7.4765 14.9530 0.5173 Constraint 298 572 6.2863 7.8579 15.7157 0.5173 Constraint 221 504 5.7047 7.1309 14.2618 0.4846 Constraint 148 456 4.5911 5.7388 11.4776 0.4653 Constraint 148 248 5.5575 6.9469 13.8938 0.4653 Constraint 406 534 6.2684 7.8354 15.6709 0.4596 Constraint 97 642 5.6372 7.0466 14.0931 0.4567 Constraint 51 465 6.2315 7.7894 15.5788 0.4567 Constraint 51 456 3.9669 4.9586 9.9173 0.4567 Constraint 44 456 5.5401 6.9252 13.8504 0.4567 Constraint 388 659 6.2990 7.8737 15.7475 0.4203 Constraint 75 472 4.2731 5.3413 10.6827 0.4203 Constraint 75 465 4.8064 6.0080 12.0160 0.4203 Constraint 75 221 6.0764 7.5955 15.1911 0.4203 Constraint 75 213 4.7284 5.9105 11.8210 0.4203 Constraint 75 207 5.6853 7.1066 14.2133 0.4203 Constraint 75 200 4.9401 6.1751 12.3502 0.4203 Constraint 66 472 5.1887 6.4859 12.9717 0.4203 Constraint 66 221 4.5898 5.7372 11.4744 0.4203 Constraint 66 213 5.6958 7.1197 14.2394 0.4203 Constraint 58 472 5.1763 6.4704 12.9408 0.4203 Constraint 58 380 5.6970 7.1212 14.2424 0.4203 Constraint 58 233 3.1980 3.9975 7.9950 0.4203 Constraint 51 233 5.8528 7.3160 14.6320 0.4203 Constraint 456 534 5.3422 6.6777 13.3554 0.3617 Constraint 456 526 4.5613 5.7017 11.4033 0.3617 Constraint 84 310 5.7215 7.1519 14.3037 0.3557 Constraint 323 613 5.8989 7.3737 14.7474 0.3504 Constraint 58 526 6.3587 7.9484 15.8969 0.3449 Constraint 148 371 6.2382 7.7977 15.5955 0.3447 Constraint 148 257 6.2696 7.8371 15.6741 0.3447 Constraint 142 456 5.6383 7.0478 14.0957 0.3447 Constraint 134 488 6.2258 7.7822 15.5644 0.3447 Constraint 134 456 6.0812 7.6015 15.2030 0.3447 Constraint 134 275 6.3503 7.9378 15.8757 0.3447 Constraint 84 264 5.4289 6.7861 13.5722 0.3210 Constraint 354 683 3.8350 4.7938 9.5876 0.2954 Constraint 349 683 5.6909 7.1136 14.2272 0.2954 Constraint 142 526 5.5970 6.9962 13.9925 0.2886 Constraint 148 363 6.3049 7.8811 15.7622 0.2790 Constraint 134 363 5.6813 7.1016 14.2032 0.2790 Constraint 97 315 4.4419 5.5524 11.1048 0.2790 Constraint 588 671 5.8314 7.2892 14.5784 0.2764 Constraint 342 671 5.6115 7.0143 14.0286 0.2764 Constraint 323 671 4.2781 5.3476 10.6952 0.2764 Constraint 233 633 5.8469 7.3087 14.6173 0.2646 Constraint 342 659 6.3816 7.9770 15.9540 0.2412 Constraint 35 371 5.9055 7.3819 14.7638 0.2363 Constraint 24 371 5.7191 7.1489 14.2977 0.2363 Constraint 122 509 3.8760 4.8449 9.6899 0.2298 Constraint 122 488 6.2618 7.8272 15.6544 0.2298 Constraint 114 518 6.2649 7.8311 15.6622 0.2298 Constraint 114 509 5.6427 7.0534 14.1067 0.2298 Constraint 518 595 6.1146 7.6432 15.2864 0.2165 Constraint 443 625 5.6807 7.1008 14.2017 0.1826 Constraint 92 310 5.6797 7.0996 14.1992 0.1779 Constraint 92 305 5.7304 7.1630 14.3261 0.1741 Constraint 342 633 5.2403 6.5504 13.1007 0.1687 Constraint 122 481 6.1276 7.6596 15.3191 0.1615 Constraint 435 625 6.3451 7.9313 15.8626 0.1206 Constraint 435 613 6.0141 7.5176 15.0352 0.1206 Constraint 342 642 6.3646 7.9557 15.9114 0.1206 Constraint 182 642 5.3210 6.6513 13.3026 0.1206 Constraint 142 275 4.9790 6.2238 12.4476 0.1206 Constraint 122 275 5.7719 7.2148 14.4297 0.1206 Constraint 114 497 6.2549 7.8186 15.6372 0.1206 Constraint 114 488 5.4964 6.8705 13.7409 0.1206 Constraint 581 671 4.8655 6.0819 12.1638 0.1149 Constraint 581 659 5.3374 6.6717 13.3434 0.1149 Constraint 572 683 3.9468 4.9334 9.8669 0.1149 Constraint 572 671 5.2911 6.6139 13.2278 0.1149 Constraint 572 659 4.1720 5.2150 10.4300 0.1149 Constraint 559 683 5.1083 6.3854 12.7709 0.1149 Constraint 342 650 5.1409 6.4261 12.8521 0.1149 Constraint 323 683 5.9769 7.4711 14.9422 0.1149 Constraint 323 659 5.2953 6.6191 13.2382 0.1149 Constraint 323 650 4.3948 5.4934 10.9869 0.1149 Constraint 315 683 6.2120 7.7650 15.5300 0.1149 Constraint 315 671 6.2198 7.7747 15.5495 0.1149 Constraint 305 671 5.0876 6.3594 12.7189 0.1149 Constraint 298 683 4.5616 5.7020 11.4040 0.1149 Constraint 298 671 3.9686 4.9607 9.9215 0.1149 Constraint 58 142 4.4528 5.5660 11.1321 0.1149 Constraint 3 659 6.2204 7.7754 15.5509 0.1022 Constraint 122 613 6.2550 7.8188 15.6376 0.0962 Constraint 58 559 5.2428 6.5535 13.1070 0.0465 Constraint 44 298 4.1380 5.1725 10.3449 0.0465 Constraint 35 572 5.9013 7.3767 14.7534 0.0465 Constraint 24 595 6.1094 7.6367 15.2735 0.0465 Constraint 24 588 6.2157 7.7697 15.5394 0.0465 Constraint 9 603 5.1313 6.4142 12.8283 0.0105 Constraint 9 388 6.2504 7.8130 15.6260 0.0105 Constraint 683 692 0.8000 1.0000 2.0000 0.0000 Constraint 671 692 0.8000 1.0000 2.0000 0.0000 Constraint 671 683 0.8000 1.0000 2.0000 0.0000 Constraint 659 692 0.8000 1.0000 2.0000 0.0000 Constraint 659 683 0.8000 1.0000 2.0000 0.0000 Constraint 659 671 0.8000 1.0000 2.0000 0.0000 Constraint 650 692 0.8000 1.0000 2.0000 0.0000 Constraint 650 683 0.8000 1.0000 2.0000 0.0000 Constraint 650 671 0.8000 1.0000 2.0000 0.0000 Constraint 650 659 0.8000 1.0000 2.0000 0.0000 Constraint 642 692 0.8000 1.0000 2.0000 0.0000 Constraint 642 683 0.8000 1.0000 2.0000 0.0000 Constraint 642 671 0.8000 1.0000 2.0000 0.0000 Constraint 642 659 0.8000 1.0000 2.0000 0.0000 Constraint 642 650 0.8000 1.0000 2.0000 0.0000 Constraint 633 692 0.8000 1.0000 2.0000 0.0000 Constraint 633 683 0.8000 1.0000 2.0000 0.0000 Constraint 633 671 0.8000 1.0000 2.0000 0.0000 Constraint 633 659 0.8000 1.0000 2.0000 0.0000 Constraint 633 650 0.8000 1.0000 2.0000 0.0000 Constraint 633 642 0.8000 1.0000 2.0000 0.0000 Constraint 625 692 0.8000 1.0000 2.0000 0.0000 Constraint 625 683 0.8000 1.0000 2.0000 0.0000 Constraint 625 671 0.8000 1.0000 2.0000 0.0000 Constraint 625 659 0.8000 1.0000 2.0000 0.0000 Constraint 625 650 0.8000 1.0000 2.0000 0.0000 Constraint 625 642 0.8000 1.0000 2.0000 0.0000 Constraint 625 633 0.8000 1.0000 2.0000 0.0000 Constraint 613 692 0.8000 1.0000 2.0000 0.0000 Constraint 613 683 0.8000 1.0000 2.0000 0.0000 Constraint 613 671 0.8000 1.0000 2.0000 0.0000 Constraint 613 659 0.8000 1.0000 2.0000 0.0000 Constraint 613 650 0.8000 1.0000 2.0000 0.0000 Constraint 613 642 0.8000 1.0000 2.0000 0.0000 Constraint 613 633 0.8000 1.0000 2.0000 0.0000 Constraint 613 625 0.8000 1.0000 2.0000 0.0000 Constraint 603 692 0.8000 1.0000 2.0000 0.0000 Constraint 603 683 0.8000 1.0000 2.0000 0.0000 Constraint 603 671 0.8000 1.0000 2.0000 0.0000 Constraint 603 659 0.8000 1.0000 2.0000 0.0000 Constraint 603 650 0.8000 1.0000 2.0000 0.0000 Constraint 603 642 0.8000 1.0000 2.0000 0.0000 Constraint 603 633 0.8000 1.0000 2.0000 0.0000 Constraint 603 625 0.8000 1.0000 2.0000 0.0000 Constraint 603 613 0.8000 1.0000 2.0000 0.0000 Constraint 595 692 0.8000 1.0000 2.0000 0.0000 Constraint 595 683 0.8000 1.0000 2.0000 0.0000 Constraint 595 671 0.8000 1.0000 2.0000 0.0000 Constraint 595 659 0.8000 1.0000 2.0000 0.0000 Constraint 595 650 0.8000 1.0000 2.0000 0.0000 Constraint 595 642 0.8000 1.0000 2.0000 0.0000 Constraint 595 633 0.8000 1.0000 2.0000 0.0000 Constraint 595 625 0.8000 1.0000 2.0000 0.0000 Constraint 595 613 0.8000 1.0000 2.0000 0.0000 Constraint 595 603 0.8000 1.0000 2.0000 0.0000 Constraint 588 692 0.8000 1.0000 2.0000 0.0000 Constraint 588 683 0.8000 1.0000 2.0000 0.0000 Constraint 588 659 0.8000 1.0000 2.0000 0.0000 Constraint 588 650 0.8000 1.0000 2.0000 0.0000 Constraint 588 642 0.8000 1.0000 2.0000 0.0000 Constraint 588 633 0.8000 1.0000 2.0000 0.0000 Constraint 588 625 0.8000 1.0000 2.0000 0.0000 Constraint 588 613 0.8000 1.0000 2.0000 0.0000 Constraint 588 603 0.8000 1.0000 2.0000 0.0000 Constraint 588 595 0.8000 1.0000 2.0000 0.0000 Constraint 581 692 0.8000 1.0000 2.0000 0.0000 Constraint 581 683 0.8000 1.0000 2.0000 0.0000 Constraint 581 650 0.8000 1.0000 2.0000 0.0000 Constraint 581 642 0.8000 1.0000 2.0000 0.0000 Constraint 581 633 0.8000 1.0000 2.0000 0.0000 Constraint 581 625 0.8000 1.0000 2.0000 0.0000 Constraint 581 613 0.8000 1.0000 2.0000 0.0000 Constraint 581 603 0.8000 1.0000 2.0000 0.0000 Constraint 581 595 0.8000 1.0000 2.0000 0.0000 Constraint 581 588 0.8000 1.0000 2.0000 0.0000 Constraint 572 692 0.8000 1.0000 2.0000 0.0000 Constraint 572 650 0.8000 1.0000 2.0000 0.0000 Constraint 572 642 0.8000 1.0000 2.0000 0.0000 Constraint 572 633 0.8000 1.0000 2.0000 0.0000 Constraint 572 625 0.8000 1.0000 2.0000 0.0000 Constraint 572 613 0.8000 1.0000 2.0000 0.0000 Constraint 572 603 0.8000 1.0000 2.0000 0.0000 Constraint 572 595 0.8000 1.0000 2.0000 0.0000 Constraint 572 588 0.8000 1.0000 2.0000 0.0000 Constraint 572 581 0.8000 1.0000 2.0000 0.0000 Constraint 559 692 0.8000 1.0000 2.0000 0.0000 Constraint 559 671 0.8000 1.0000 2.0000 0.0000 Constraint 559 659 0.8000 1.0000 2.0000 0.0000 Constraint 559 650 0.8000 1.0000 2.0000 0.0000 Constraint 559 642 0.8000 1.0000 2.0000 0.0000 Constraint 559 633 0.8000 1.0000 2.0000 0.0000 Constraint 559 625 0.8000 1.0000 2.0000 0.0000 Constraint 559 613 0.8000 1.0000 2.0000 0.0000 Constraint 559 603 0.8000 1.0000 2.0000 0.0000 Constraint 559 595 0.8000 1.0000 2.0000 0.0000 Constraint 559 588 0.8000 1.0000 2.0000 0.0000 Constraint 559 581 0.8000 1.0000 2.0000 0.0000 Constraint 559 572 0.8000 1.0000 2.0000 0.0000 Constraint 552 692 0.8000 1.0000 2.0000 0.0000 Constraint 552 683 0.8000 1.0000 2.0000 0.0000 Constraint 552 671 0.8000 1.0000 2.0000 0.0000 Constraint 552 659 0.8000 1.0000 2.0000 0.0000 Constraint 552 650 0.8000 1.0000 2.0000 0.0000 Constraint 552 642 0.8000 1.0000 2.0000 0.0000 Constraint 552 633 0.8000 1.0000 2.0000 0.0000 Constraint 552 625 0.8000 1.0000 2.0000 0.0000 Constraint 552 613 0.8000 1.0000 2.0000 0.0000 Constraint 552 603 0.8000 1.0000 2.0000 0.0000 Constraint 552 595 0.8000 1.0000 2.0000 0.0000 Constraint 552 588 0.8000 1.0000 2.0000 0.0000 Constraint 552 581 0.8000 1.0000 2.0000 0.0000 Constraint 552 572 0.8000 1.0000 2.0000 0.0000 Constraint 552 559 0.8000 1.0000 2.0000 0.0000 Constraint 543 692 0.8000 1.0000 2.0000 0.0000 Constraint 543 683 0.8000 1.0000 2.0000 0.0000 Constraint 543 671 0.8000 1.0000 2.0000 0.0000 Constraint 543 659 0.8000 1.0000 2.0000 0.0000 Constraint 543 650 0.8000 1.0000 2.0000 0.0000 Constraint 543 642 0.8000 1.0000 2.0000 0.0000 Constraint 543 633 0.8000 1.0000 2.0000 0.0000 Constraint 543 625 0.8000 1.0000 2.0000 0.0000 Constraint 543 613 0.8000 1.0000 2.0000 0.0000 Constraint 543 603 0.8000 1.0000 2.0000 0.0000 Constraint 543 595 0.8000 1.0000 2.0000 0.0000 Constraint 543 588 0.8000 1.0000 2.0000 0.0000 Constraint 543 581 0.8000 1.0000 2.0000 0.0000 Constraint 543 572 0.8000 1.0000 2.0000 0.0000 Constraint 543 559 0.8000 1.0000 2.0000 0.0000 Constraint 543 552 0.8000 1.0000 2.0000 0.0000 Constraint 534 692 0.8000 1.0000 2.0000 0.0000 Constraint 534 683 0.8000 1.0000 2.0000 0.0000 Constraint 534 671 0.8000 1.0000 2.0000 0.0000 Constraint 534 659 0.8000 1.0000 2.0000 0.0000 Constraint 534 650 0.8000 1.0000 2.0000 0.0000 Constraint 534 642 0.8000 1.0000 2.0000 0.0000 Constraint 534 633 0.8000 1.0000 2.0000 0.0000 Constraint 534 625 0.8000 1.0000 2.0000 0.0000 Constraint 534 613 0.8000 1.0000 2.0000 0.0000 Constraint 534 603 0.8000 1.0000 2.0000 0.0000 Constraint 534 595 0.8000 1.0000 2.0000 0.0000 Constraint 534 588 0.8000 1.0000 2.0000 0.0000 Constraint 534 581 0.8000 1.0000 2.0000 0.0000 Constraint 534 572 0.8000 1.0000 2.0000 0.0000 Constraint 534 559 0.8000 1.0000 2.0000 0.0000 Constraint 534 552 0.8000 1.0000 2.0000 0.0000 Constraint 534 543 0.8000 1.0000 2.0000 0.0000 Constraint 526 692 0.8000 1.0000 2.0000 0.0000 Constraint 526 683 0.8000 1.0000 2.0000 0.0000 Constraint 526 671 0.8000 1.0000 2.0000 0.0000 Constraint 526 659 0.8000 1.0000 2.0000 0.0000 Constraint 526 650 0.8000 1.0000 2.0000 0.0000 Constraint 526 642 0.8000 1.0000 2.0000 0.0000 Constraint 526 633 0.8000 1.0000 2.0000 0.0000 Constraint 526 625 0.8000 1.0000 2.0000 0.0000 Constraint 526 613 0.8000 1.0000 2.0000 0.0000 Constraint 526 588 0.8000 1.0000 2.0000 0.0000 Constraint 526 581 0.8000 1.0000 2.0000 0.0000 Constraint 526 572 0.8000 1.0000 2.0000 0.0000 Constraint 526 559 0.8000 1.0000 2.0000 0.0000 Constraint 526 552 0.8000 1.0000 2.0000 0.0000 Constraint 526 543 0.8000 1.0000 2.0000 0.0000 Constraint 526 534 0.8000 1.0000 2.0000 0.0000 Constraint 518 692 0.8000 1.0000 2.0000 0.0000 Constraint 518 683 0.8000 1.0000 2.0000 0.0000 Constraint 518 671 0.8000 1.0000 2.0000 0.0000 Constraint 518 659 0.8000 1.0000 2.0000 0.0000 Constraint 518 650 0.8000 1.0000 2.0000 0.0000 Constraint 518 642 0.8000 1.0000 2.0000 0.0000 Constraint 518 633 0.8000 1.0000 2.0000 0.0000 Constraint 518 625 0.8000 1.0000 2.0000 0.0000 Constraint 518 613 0.8000 1.0000 2.0000 0.0000 Constraint 518 603 0.8000 1.0000 2.0000 0.0000 Constraint 518 581 0.8000 1.0000 2.0000 0.0000 Constraint 518 572 0.8000 1.0000 2.0000 0.0000 Constraint 518 559 0.8000 1.0000 2.0000 0.0000 Constraint 518 552 0.8000 1.0000 2.0000 0.0000 Constraint 518 543 0.8000 1.0000 2.0000 0.0000 Constraint 518 534 0.8000 1.0000 2.0000 0.0000 Constraint 518 526 0.8000 1.0000 2.0000 0.0000 Constraint 509 692 0.8000 1.0000 2.0000 0.0000 Constraint 509 683 0.8000 1.0000 2.0000 0.0000 Constraint 509 671 0.8000 1.0000 2.0000 0.0000 Constraint 509 659 0.8000 1.0000 2.0000 0.0000 Constraint 509 650 0.8000 1.0000 2.0000 0.0000 Constraint 509 642 0.8000 1.0000 2.0000 0.0000 Constraint 509 633 0.8000 1.0000 2.0000 0.0000 Constraint 509 625 0.8000 1.0000 2.0000 0.0000 Constraint 509 613 0.8000 1.0000 2.0000 0.0000 Constraint 509 603 0.8000 1.0000 2.0000 0.0000 Constraint 509 595 0.8000 1.0000 2.0000 0.0000 Constraint 509 588 0.8000 1.0000 2.0000 0.0000 Constraint 509 572 0.8000 1.0000 2.0000 0.0000 Constraint 509 559 0.8000 1.0000 2.0000 0.0000 Constraint 509 552 0.8000 1.0000 2.0000 0.0000 Constraint 509 543 0.8000 1.0000 2.0000 0.0000 Constraint 509 534 0.8000 1.0000 2.0000 0.0000 Constraint 509 526 0.8000 1.0000 2.0000 0.0000 Constraint 509 518 0.8000 1.0000 2.0000 0.0000 Constraint 504 692 0.8000 1.0000 2.0000 0.0000 Constraint 504 683 0.8000 1.0000 2.0000 0.0000 Constraint 504 671 0.8000 1.0000 2.0000 0.0000 Constraint 504 659 0.8000 1.0000 2.0000 0.0000 Constraint 504 650 0.8000 1.0000 2.0000 0.0000 Constraint 504 642 0.8000 1.0000 2.0000 0.0000 Constraint 504 633 0.8000 1.0000 2.0000 0.0000 Constraint 504 625 0.8000 1.0000 2.0000 0.0000 Constraint 504 613 0.8000 1.0000 2.0000 0.0000 Constraint 504 603 0.8000 1.0000 2.0000 0.0000 Constraint 504 595 0.8000 1.0000 2.0000 0.0000 Constraint 504 588 0.8000 1.0000 2.0000 0.0000 Constraint 504 572 0.8000 1.0000 2.0000 0.0000 Constraint 504 559 0.8000 1.0000 2.0000 0.0000 Constraint 504 552 0.8000 1.0000 2.0000 0.0000 Constraint 504 543 0.8000 1.0000 2.0000 0.0000 Constraint 504 534 0.8000 1.0000 2.0000 0.0000 Constraint 504 526 0.8000 1.0000 2.0000 0.0000 Constraint 504 518 0.8000 1.0000 2.0000 0.0000 Constraint 504 509 0.8000 1.0000 2.0000 0.0000 Constraint 497 692 0.8000 1.0000 2.0000 0.0000 Constraint 497 683 0.8000 1.0000 2.0000 0.0000 Constraint 497 671 0.8000 1.0000 2.0000 0.0000 Constraint 497 659 0.8000 1.0000 2.0000 0.0000 Constraint 497 650 0.8000 1.0000 2.0000 0.0000 Constraint 497 642 0.8000 1.0000 2.0000 0.0000 Constraint 497 633 0.8000 1.0000 2.0000 0.0000 Constraint 497 625 0.8000 1.0000 2.0000 0.0000 Constraint 497 613 0.8000 1.0000 2.0000 0.0000 Constraint 497 603 0.8000 1.0000 2.0000 0.0000 Constraint 497 595 0.8000 1.0000 2.0000 0.0000 Constraint 497 588 0.8000 1.0000 2.0000 0.0000 Constraint 497 572 0.8000 1.0000 2.0000 0.0000 Constraint 497 559 0.8000 1.0000 2.0000 0.0000 Constraint 497 552 0.8000 1.0000 2.0000 0.0000 Constraint 497 543 0.8000 1.0000 2.0000 0.0000 Constraint 497 534 0.8000 1.0000 2.0000 0.0000 Constraint 497 526 0.8000 1.0000 2.0000 0.0000 Constraint 497 518 0.8000 1.0000 2.0000 0.0000 Constraint 497 509 0.8000 1.0000 2.0000 0.0000 Constraint 497 504 0.8000 1.0000 2.0000 0.0000 Constraint 488 692 0.8000 1.0000 2.0000 0.0000 Constraint 488 683 0.8000 1.0000 2.0000 0.0000 Constraint 488 671 0.8000 1.0000 2.0000 0.0000 Constraint 488 659 0.8000 1.0000 2.0000 0.0000 Constraint 488 650 0.8000 1.0000 2.0000 0.0000 Constraint 488 642 0.8000 1.0000 2.0000 0.0000 Constraint 488 633 0.8000 1.0000 2.0000 0.0000 Constraint 488 625 0.8000 1.0000 2.0000 0.0000 Constraint 488 613 0.8000 1.0000 2.0000 0.0000 Constraint 488 603 0.8000 1.0000 2.0000 0.0000 Constraint 488 595 0.8000 1.0000 2.0000 0.0000 Constraint 488 588 0.8000 1.0000 2.0000 0.0000 Constraint 488 581 0.8000 1.0000 2.0000 0.0000 Constraint 488 572 0.8000 1.0000 2.0000 0.0000 Constraint 488 559 0.8000 1.0000 2.0000 0.0000 Constraint 488 552 0.8000 1.0000 2.0000 0.0000 Constraint 488 543 0.8000 1.0000 2.0000 0.0000 Constraint 488 534 0.8000 1.0000 2.0000 0.0000 Constraint 488 526 0.8000 1.0000 2.0000 0.0000 Constraint 488 518 0.8000 1.0000 2.0000 0.0000 Constraint 488 509 0.8000 1.0000 2.0000 0.0000 Constraint 488 504 0.8000 1.0000 2.0000 0.0000 Constraint 488 497 0.8000 1.0000 2.0000 0.0000 Constraint 481 692 0.8000 1.0000 2.0000 0.0000 Constraint 481 683 0.8000 1.0000 2.0000 0.0000 Constraint 481 671 0.8000 1.0000 2.0000 0.0000 Constraint 481 659 0.8000 1.0000 2.0000 0.0000 Constraint 481 650 0.8000 1.0000 2.0000 0.0000 Constraint 481 642 0.8000 1.0000 2.0000 0.0000 Constraint 481 633 0.8000 1.0000 2.0000 0.0000 Constraint 481 625 0.8000 1.0000 2.0000 0.0000 Constraint 481 613 0.8000 1.0000 2.0000 0.0000 Constraint 481 603 0.8000 1.0000 2.0000 0.0000 Constraint 481 595 0.8000 1.0000 2.0000 0.0000 Constraint 481 588 0.8000 1.0000 2.0000 0.0000 Constraint 481 572 0.8000 1.0000 2.0000 0.0000 Constraint 481 559 0.8000 1.0000 2.0000 0.0000 Constraint 481 552 0.8000 1.0000 2.0000 0.0000 Constraint 481 543 0.8000 1.0000 2.0000 0.0000 Constraint 481 534 0.8000 1.0000 2.0000 0.0000 Constraint 481 526 0.8000 1.0000 2.0000 0.0000 Constraint 481 518 0.8000 1.0000 2.0000 0.0000 Constraint 481 509 0.8000 1.0000 2.0000 0.0000 Constraint 481 504 0.8000 1.0000 2.0000 0.0000 Constraint 481 497 0.8000 1.0000 2.0000 0.0000 Constraint 481 488 0.8000 1.0000 2.0000 0.0000 Constraint 472 692 0.8000 1.0000 2.0000 0.0000 Constraint 472 683 0.8000 1.0000 2.0000 0.0000 Constraint 472 671 0.8000 1.0000 2.0000 0.0000 Constraint 472 659 0.8000 1.0000 2.0000 0.0000 Constraint 472 650 0.8000 1.0000 2.0000 0.0000 Constraint 472 642 0.8000 1.0000 2.0000 0.0000 Constraint 472 633 0.8000 1.0000 2.0000 0.0000 Constraint 472 625 0.8000 1.0000 2.0000 0.0000 Constraint 472 613 0.8000 1.0000 2.0000 0.0000 Constraint 472 603 0.8000 1.0000 2.0000 0.0000 Constraint 472 595 0.8000 1.0000 2.0000 0.0000 Constraint 472 588 0.8000 1.0000 2.0000 0.0000 Constraint 472 581 0.8000 1.0000 2.0000 0.0000 Constraint 472 572 0.8000 1.0000 2.0000 0.0000 Constraint 472 559 0.8000 1.0000 2.0000 0.0000 Constraint 472 552 0.8000 1.0000 2.0000 0.0000 Constraint 472 543 0.8000 1.0000 2.0000 0.0000 Constraint 472 534 0.8000 1.0000 2.0000 0.0000 Constraint 472 526 0.8000 1.0000 2.0000 0.0000 Constraint 472 518 0.8000 1.0000 2.0000 0.0000 Constraint 472 509 0.8000 1.0000 2.0000 0.0000 Constraint 472 504 0.8000 1.0000 2.0000 0.0000 Constraint 472 497 0.8000 1.0000 2.0000 0.0000 Constraint 472 488 0.8000 1.0000 2.0000 0.0000 Constraint 472 481 0.8000 1.0000 2.0000 0.0000 Constraint 465 692 0.8000 1.0000 2.0000 0.0000 Constraint 465 683 0.8000 1.0000 2.0000 0.0000 Constraint 465 671 0.8000 1.0000 2.0000 0.0000 Constraint 465 659 0.8000 1.0000 2.0000 0.0000 Constraint 465 650 0.8000 1.0000 2.0000 0.0000 Constraint 465 642 0.8000 1.0000 2.0000 0.0000 Constraint 465 633 0.8000 1.0000 2.0000 0.0000 Constraint 465 625 0.8000 1.0000 2.0000 0.0000 Constraint 465 613 0.8000 1.0000 2.0000 0.0000 Constraint 465 603 0.8000 1.0000 2.0000 0.0000 Constraint 465 595 0.8000 1.0000 2.0000 0.0000 Constraint 465 588 0.8000 1.0000 2.0000 0.0000 Constraint 465 581 0.8000 1.0000 2.0000 0.0000 Constraint 465 572 0.8000 1.0000 2.0000 0.0000 Constraint 465 559 0.8000 1.0000 2.0000 0.0000 Constraint 465 552 0.8000 1.0000 2.0000 0.0000 Constraint 465 543 0.8000 1.0000 2.0000 0.0000 Constraint 465 534 0.8000 1.0000 2.0000 0.0000 Constraint 465 526 0.8000 1.0000 2.0000 0.0000 Constraint 465 518 0.8000 1.0000 2.0000 0.0000 Constraint 465 509 0.8000 1.0000 2.0000 0.0000 Constraint 465 504 0.8000 1.0000 2.0000 0.0000 Constraint 465 497 0.8000 1.0000 2.0000 0.0000 Constraint 465 488 0.8000 1.0000 2.0000 0.0000 Constraint 465 481 0.8000 1.0000 2.0000 0.0000 Constraint 465 472 0.8000 1.0000 2.0000 0.0000 Constraint 456 692 0.8000 1.0000 2.0000 0.0000 Constraint 456 683 0.8000 1.0000 2.0000 0.0000 Constraint 456 671 0.8000 1.0000 2.0000 0.0000 Constraint 456 659 0.8000 1.0000 2.0000 0.0000 Constraint 456 650 0.8000 1.0000 2.0000 0.0000 Constraint 456 642 0.8000 1.0000 2.0000 0.0000 Constraint 456 633 0.8000 1.0000 2.0000 0.0000 Constraint 456 625 0.8000 1.0000 2.0000 0.0000 Constraint 456 613 0.8000 1.0000 2.0000 0.0000 Constraint 456 603 0.8000 1.0000 2.0000 0.0000 Constraint 456 595 0.8000 1.0000 2.0000 0.0000 Constraint 456 588 0.8000 1.0000 2.0000 0.0000 Constraint 456 581 0.8000 1.0000 2.0000 0.0000 Constraint 456 572 0.8000 1.0000 2.0000 0.0000 Constraint 456 559 0.8000 1.0000 2.0000 0.0000 Constraint 456 552 0.8000 1.0000 2.0000 0.0000 Constraint 456 543 0.8000 1.0000 2.0000 0.0000 Constraint 456 518 0.8000 1.0000 2.0000 0.0000 Constraint 456 509 0.8000 1.0000 2.0000 0.0000 Constraint 456 504 0.8000 1.0000 2.0000 0.0000 Constraint 456 497 0.8000 1.0000 2.0000 0.0000 Constraint 456 488 0.8000 1.0000 2.0000 0.0000 Constraint 456 481 0.8000 1.0000 2.0000 0.0000 Constraint 456 472 0.8000 1.0000 2.0000 0.0000 Constraint 456 465 0.8000 1.0000 2.0000 0.0000 Constraint 443 671 0.8000 1.0000 2.0000 0.0000 Constraint 443 659 0.8000 1.0000 2.0000 0.0000 Constraint 443 650 0.8000 1.0000 2.0000 0.0000 Constraint 443 642 0.8000 1.0000 2.0000 0.0000 Constraint 443 633 0.8000 1.0000 2.0000 0.0000 Constraint 443 613 0.8000 1.0000 2.0000 0.0000 Constraint 443 603 0.8000 1.0000 2.0000 0.0000 Constraint 443 595 0.8000 1.0000 2.0000 0.0000 Constraint 443 588 0.8000 1.0000 2.0000 0.0000 Constraint 443 581 0.8000 1.0000 2.0000 0.0000 Constraint 443 572 0.8000 1.0000 2.0000 0.0000 Constraint 443 559 0.8000 1.0000 2.0000 0.0000 Constraint 443 552 0.8000 1.0000 2.0000 0.0000 Constraint 443 543 0.8000 1.0000 2.0000 0.0000 Constraint 443 534 0.8000 1.0000 2.0000 0.0000 Constraint 443 526 0.8000 1.0000 2.0000 0.0000 Constraint 443 509 0.8000 1.0000 2.0000 0.0000 Constraint 443 504 0.8000 1.0000 2.0000 0.0000 Constraint 443 497 0.8000 1.0000 2.0000 0.0000 Constraint 443 488 0.8000 1.0000 2.0000 0.0000 Constraint 443 481 0.8000 1.0000 2.0000 0.0000 Constraint 443 472 0.8000 1.0000 2.0000 0.0000 Constraint 443 465 0.8000 1.0000 2.0000 0.0000 Constraint 443 456 0.8000 1.0000 2.0000 0.0000 Constraint 435 692 0.8000 1.0000 2.0000 0.0000 Constraint 435 683 0.8000 1.0000 2.0000 0.0000 Constraint 435 671 0.8000 1.0000 2.0000 0.0000 Constraint 435 659 0.8000 1.0000 2.0000 0.0000 Constraint 435 650 0.8000 1.0000 2.0000 0.0000 Constraint 435 642 0.8000 1.0000 2.0000 0.0000 Constraint 435 633 0.8000 1.0000 2.0000 0.0000 Constraint 435 588 0.8000 1.0000 2.0000 0.0000 Constraint 435 581 0.8000 1.0000 2.0000 0.0000 Constraint 435 572 0.8000 1.0000 2.0000 0.0000 Constraint 435 559 0.8000 1.0000 2.0000 0.0000 Constraint 435 543 0.8000 1.0000 2.0000 0.0000 Constraint 435 534 0.8000 1.0000 2.0000 0.0000 Constraint 435 509 0.8000 1.0000 2.0000 0.0000 Constraint 435 497 0.8000 1.0000 2.0000 0.0000 Constraint 435 488 0.8000 1.0000 2.0000 0.0000 Constraint 435 481 0.8000 1.0000 2.0000 0.0000 Constraint 435 472 0.8000 1.0000 2.0000 0.0000 Constraint 435 465 0.8000 1.0000 2.0000 0.0000 Constraint 435 456 0.8000 1.0000 2.0000 0.0000 Constraint 435 443 0.8000 1.0000 2.0000 0.0000 Constraint 429 692 0.8000 1.0000 2.0000 0.0000 Constraint 429 683 0.8000 1.0000 2.0000 0.0000 Constraint 429 671 0.8000 1.0000 2.0000 0.0000 Constraint 429 659 0.8000 1.0000 2.0000 0.0000 Constraint 429 650 0.8000 1.0000 2.0000 0.0000 Constraint 429 642 0.8000 1.0000 2.0000 0.0000 Constraint 429 633 0.8000 1.0000 2.0000 0.0000 Constraint 429 625 0.8000 1.0000 2.0000 0.0000 Constraint 429 613 0.8000 1.0000 2.0000 0.0000 Constraint 429 595 0.8000 1.0000 2.0000 0.0000 Constraint 429 588 0.8000 1.0000 2.0000 0.0000 Constraint 429 581 0.8000 1.0000 2.0000 0.0000 Constraint 429 572 0.8000 1.0000 2.0000 0.0000 Constraint 429 559 0.8000 1.0000 2.0000 0.0000 Constraint 429 552 0.8000 1.0000 2.0000 0.0000 Constraint 429 543 0.8000 1.0000 2.0000 0.0000 Constraint 429 534 0.8000 1.0000 2.0000 0.0000 Constraint 429 526 0.8000 1.0000 2.0000 0.0000 Constraint 429 518 0.8000 1.0000 2.0000 0.0000 Constraint 429 509 0.8000 1.0000 2.0000 0.0000 Constraint 429 504 0.8000 1.0000 2.0000 0.0000 Constraint 429 488 0.8000 1.0000 2.0000 0.0000 Constraint 429 481 0.8000 1.0000 2.0000 0.0000 Constraint 429 472 0.8000 1.0000 2.0000 0.0000 Constraint 429 465 0.8000 1.0000 2.0000 0.0000 Constraint 429 456 0.8000 1.0000 2.0000 0.0000 Constraint 429 443 0.8000 1.0000 2.0000 0.0000 Constraint 429 435 0.8000 1.0000 2.0000 0.0000 Constraint 418 692 0.8000 1.0000 2.0000 0.0000 Constraint 418 683 0.8000 1.0000 2.0000 0.0000 Constraint 418 671 0.8000 1.0000 2.0000 0.0000 Constraint 418 659 0.8000 1.0000 2.0000 0.0000 Constraint 418 650 0.8000 1.0000 2.0000 0.0000 Constraint 418 642 0.8000 1.0000 2.0000 0.0000 Constraint 418 633 0.8000 1.0000 2.0000 0.0000 Constraint 418 625 0.8000 1.0000 2.0000 0.0000 Constraint 418 613 0.8000 1.0000 2.0000 0.0000 Constraint 418 603 0.8000 1.0000 2.0000 0.0000 Constraint 418 595 0.8000 1.0000 2.0000 0.0000 Constraint 418 588 0.8000 1.0000 2.0000 0.0000 Constraint 418 581 0.8000 1.0000 2.0000 0.0000 Constraint 418 572 0.8000 1.0000 2.0000 0.0000 Constraint 418 559 0.8000 1.0000 2.0000 0.0000 Constraint 418 534 0.8000 1.0000 2.0000 0.0000 Constraint 418 481 0.8000 1.0000 2.0000 0.0000 Constraint 418 472 0.8000 1.0000 2.0000 0.0000 Constraint 418 465 0.8000 1.0000 2.0000 0.0000 Constraint 418 456 0.8000 1.0000 2.0000 0.0000 Constraint 418 443 0.8000 1.0000 2.0000 0.0000 Constraint 418 435 0.8000 1.0000 2.0000 0.0000 Constraint 418 429 0.8000 1.0000 2.0000 0.0000 Constraint 406 692 0.8000 1.0000 2.0000 0.0000 Constraint 406 683 0.8000 1.0000 2.0000 0.0000 Constraint 406 671 0.8000 1.0000 2.0000 0.0000 Constraint 406 659 0.8000 1.0000 2.0000 0.0000 Constraint 406 650 0.8000 1.0000 2.0000 0.0000 Constraint 406 642 0.8000 1.0000 2.0000 0.0000 Constraint 406 633 0.8000 1.0000 2.0000 0.0000 Constraint 406 625 0.8000 1.0000 2.0000 0.0000 Constraint 406 509 0.8000 1.0000 2.0000 0.0000 Constraint 406 497 0.8000 1.0000 2.0000 0.0000 Constraint 406 488 0.8000 1.0000 2.0000 0.0000 Constraint 406 481 0.8000 1.0000 2.0000 0.0000 Constraint 406 472 0.8000 1.0000 2.0000 0.0000 Constraint 406 465 0.8000 1.0000 2.0000 0.0000 Constraint 406 456 0.8000 1.0000 2.0000 0.0000 Constraint 406 443 0.8000 1.0000 2.0000 0.0000 Constraint 406 435 0.8000 1.0000 2.0000 0.0000 Constraint 406 429 0.8000 1.0000 2.0000 0.0000 Constraint 406 418 0.8000 1.0000 2.0000 0.0000 Constraint 399 692 0.8000 1.0000 2.0000 0.0000 Constraint 399 683 0.8000 1.0000 2.0000 0.0000 Constraint 399 671 0.8000 1.0000 2.0000 0.0000 Constraint 399 659 0.8000 1.0000 2.0000 0.0000 Constraint 399 650 0.8000 1.0000 2.0000 0.0000 Constraint 399 642 0.8000 1.0000 2.0000 0.0000 Constraint 399 633 0.8000 1.0000 2.0000 0.0000 Constraint 399 572 0.8000 1.0000 2.0000 0.0000 Constraint 399 534 0.8000 1.0000 2.0000 0.0000 Constraint 399 465 0.8000 1.0000 2.0000 0.0000 Constraint 399 456 0.8000 1.0000 2.0000 0.0000 Constraint 399 443 0.8000 1.0000 2.0000 0.0000 Constraint 399 435 0.8000 1.0000 2.0000 0.0000 Constraint 399 429 0.8000 1.0000 2.0000 0.0000 Constraint 399 418 0.8000 1.0000 2.0000 0.0000 Constraint 399 406 0.8000 1.0000 2.0000 0.0000 Constraint 388 588 0.8000 1.0000 2.0000 0.0000 Constraint 388 581 0.8000 1.0000 2.0000 0.0000 Constraint 388 572 0.8000 1.0000 2.0000 0.0000 Constraint 388 559 0.8000 1.0000 2.0000 0.0000 Constraint 388 552 0.8000 1.0000 2.0000 0.0000 Constraint 388 543 0.8000 1.0000 2.0000 0.0000 Constraint 388 534 0.8000 1.0000 2.0000 0.0000 Constraint 388 526 0.8000 1.0000 2.0000 0.0000 Constraint 388 518 0.8000 1.0000 2.0000 0.0000 Constraint 388 509 0.8000 1.0000 2.0000 0.0000 Constraint 388 504 0.8000 1.0000 2.0000 0.0000 Constraint 388 497 0.8000 1.0000 2.0000 0.0000 Constraint 388 488 0.8000 1.0000 2.0000 0.0000 Constraint 388 481 0.8000 1.0000 2.0000 0.0000 Constraint 388 472 0.8000 1.0000 2.0000 0.0000 Constraint 388 465 0.8000 1.0000 2.0000 0.0000 Constraint 388 456 0.8000 1.0000 2.0000 0.0000 Constraint 388 443 0.8000 1.0000 2.0000 0.0000 Constraint 388 435 0.8000 1.0000 2.0000 0.0000 Constraint 388 429 0.8000 1.0000 2.0000 0.0000 Constraint 388 418 0.8000 1.0000 2.0000 0.0000 Constraint 388 406 0.8000 1.0000 2.0000 0.0000 Constraint 388 399 0.8000 1.0000 2.0000 0.0000 Constraint 380 692 0.8000 1.0000 2.0000 0.0000 Constraint 380 683 0.8000 1.0000 2.0000 0.0000 Constraint 380 671 0.8000 1.0000 2.0000 0.0000 Constraint 380 659 0.8000 1.0000 2.0000 0.0000 Constraint 380 650 0.8000 1.0000 2.0000 0.0000 Constraint 380 588 0.8000 1.0000 2.0000 0.0000 Constraint 380 581 0.8000 1.0000 2.0000 0.0000 Constraint 380 572 0.8000 1.0000 2.0000 0.0000 Constraint 380 559 0.8000 1.0000 2.0000 0.0000 Constraint 380 552 0.8000 1.0000 2.0000 0.0000 Constraint 380 543 0.8000 1.0000 2.0000 0.0000 Constraint 380 534 0.8000 1.0000 2.0000 0.0000 Constraint 380 509 0.8000 1.0000 2.0000 0.0000 Constraint 380 504 0.8000 1.0000 2.0000 0.0000 Constraint 380 488 0.8000 1.0000 2.0000 0.0000 Constraint 380 472 0.8000 1.0000 2.0000 0.0000 Constraint 380 465 0.8000 1.0000 2.0000 0.0000 Constraint 380 435 0.8000 1.0000 2.0000 0.0000 Constraint 380 429 0.8000 1.0000 2.0000 0.0000 Constraint 380 418 0.8000 1.0000 2.0000 0.0000 Constraint 380 406 0.8000 1.0000 2.0000 0.0000 Constraint 380 399 0.8000 1.0000 2.0000 0.0000 Constraint 380 388 0.8000 1.0000 2.0000 0.0000 Constraint 371 692 0.8000 1.0000 2.0000 0.0000 Constraint 371 683 0.8000 1.0000 2.0000 0.0000 Constraint 371 603 0.8000 1.0000 2.0000 0.0000 Constraint 371 595 0.8000 1.0000 2.0000 0.0000 Constraint 371 588 0.8000 1.0000 2.0000 0.0000 Constraint 371 581 0.8000 1.0000 2.0000 0.0000 Constraint 371 572 0.8000 1.0000 2.0000 0.0000 Constraint 371 559 0.8000 1.0000 2.0000 0.0000 Constraint 371 552 0.8000 1.0000 2.0000 0.0000 Constraint 371 543 0.8000 1.0000 2.0000 0.0000 Constraint 371 534 0.8000 1.0000 2.0000 0.0000 Constraint 371 526 0.8000 1.0000 2.0000 0.0000 Constraint 371 518 0.8000 1.0000 2.0000 0.0000 Constraint 371 509 0.8000 1.0000 2.0000 0.0000 Constraint 371 504 0.8000 1.0000 2.0000 0.0000 Constraint 371 497 0.8000 1.0000 2.0000 0.0000 Constraint 371 488 0.8000 1.0000 2.0000 0.0000 Constraint 371 481 0.8000 1.0000 2.0000 0.0000 Constraint 371 472 0.8000 1.0000 2.0000 0.0000 Constraint 371 465 0.8000 1.0000 2.0000 0.0000 Constraint 371 456 0.8000 1.0000 2.0000 0.0000 Constraint 371 435 0.8000 1.0000 2.0000 0.0000 Constraint 371 429 0.8000 1.0000 2.0000 0.0000 Constraint 371 418 0.8000 1.0000 2.0000 0.0000 Constraint 371 406 0.8000 1.0000 2.0000 0.0000 Constraint 371 399 0.8000 1.0000 2.0000 0.0000 Constraint 371 388 0.8000 1.0000 2.0000 0.0000 Constraint 371 380 0.8000 1.0000 2.0000 0.0000 Constraint 363 692 0.8000 1.0000 2.0000 0.0000 Constraint 363 683 0.8000 1.0000 2.0000 0.0000 Constraint 363 671 0.8000 1.0000 2.0000 0.0000 Constraint 363 603 0.8000 1.0000 2.0000 0.0000 Constraint 363 588 0.8000 1.0000 2.0000 0.0000 Constraint 363 581 0.8000 1.0000 2.0000 0.0000 Constraint 363 572 0.8000 1.0000 2.0000 0.0000 Constraint 363 559 0.8000 1.0000 2.0000 0.0000 Constraint 363 552 0.8000 1.0000 2.0000 0.0000 Constraint 363 543 0.8000 1.0000 2.0000 0.0000 Constraint 363 534 0.8000 1.0000 2.0000 0.0000 Constraint 363 526 0.8000 1.0000 2.0000 0.0000 Constraint 363 518 0.8000 1.0000 2.0000 0.0000 Constraint 363 509 0.8000 1.0000 2.0000 0.0000 Constraint 363 504 0.8000 1.0000 2.0000 0.0000 Constraint 363 497 0.8000 1.0000 2.0000 0.0000 Constraint 363 488 0.8000 1.0000 2.0000 0.0000 Constraint 363 481 0.8000 1.0000 2.0000 0.0000 Constraint 363 472 0.8000 1.0000 2.0000 0.0000 Constraint 363 465 0.8000 1.0000 2.0000 0.0000 Constraint 363 456 0.8000 1.0000 2.0000 0.0000 Constraint 363 443 0.8000 1.0000 2.0000 0.0000 Constraint 363 435 0.8000 1.0000 2.0000 0.0000 Constraint 363 429 0.8000 1.0000 2.0000 0.0000 Constraint 363 418 0.8000 1.0000 2.0000 0.0000 Constraint 363 406 0.8000 1.0000 2.0000 0.0000 Constraint 363 399 0.8000 1.0000 2.0000 0.0000 Constraint 363 388 0.8000 1.0000 2.0000 0.0000 Constraint 363 380 0.8000 1.0000 2.0000 0.0000 Constraint 363 371 0.8000 1.0000 2.0000 0.0000 Constraint 354 692 0.8000 1.0000 2.0000 0.0000 Constraint 354 603 0.8000 1.0000 2.0000 0.0000 Constraint 354 595 0.8000 1.0000 2.0000 0.0000 Constraint 354 588 0.8000 1.0000 2.0000 0.0000 Constraint 354 581 0.8000 1.0000 2.0000 0.0000 Constraint 354 572 0.8000 1.0000 2.0000 0.0000 Constraint 354 559 0.8000 1.0000 2.0000 0.0000 Constraint 354 552 0.8000 1.0000 2.0000 0.0000 Constraint 354 543 0.8000 1.0000 2.0000 0.0000 Constraint 354 534 0.8000 1.0000 2.0000 0.0000 Constraint 354 526 0.8000 1.0000 2.0000 0.0000 Constraint 354 518 0.8000 1.0000 2.0000 0.0000 Constraint 354 509 0.8000 1.0000 2.0000 0.0000 Constraint 354 504 0.8000 1.0000 2.0000 0.0000 Constraint 354 497 0.8000 1.0000 2.0000 0.0000 Constraint 354 488 0.8000 1.0000 2.0000 0.0000 Constraint 354 481 0.8000 1.0000 2.0000 0.0000 Constraint 354 472 0.8000 1.0000 2.0000 0.0000 Constraint 354 465 0.8000 1.0000 2.0000 0.0000 Constraint 354 456 0.8000 1.0000 2.0000 0.0000 Constraint 354 443 0.8000 1.0000 2.0000 0.0000 Constraint 354 435 0.8000 1.0000 2.0000 0.0000 Constraint 354 429 0.8000 1.0000 2.0000 0.0000 Constraint 354 418 0.8000 1.0000 2.0000 0.0000 Constraint 354 406 0.8000 1.0000 2.0000 0.0000 Constraint 354 399 0.8000 1.0000 2.0000 0.0000 Constraint 354 388 0.8000 1.0000 2.0000 0.0000 Constraint 354 380 0.8000 1.0000 2.0000 0.0000 Constraint 354 371 0.8000 1.0000 2.0000 0.0000 Constraint 354 363 0.8000 1.0000 2.0000 0.0000 Constraint 349 692 0.8000 1.0000 2.0000 0.0000 Constraint 349 603 0.8000 1.0000 2.0000 0.0000 Constraint 349 595 0.8000 1.0000 2.0000 0.0000 Constraint 349 588 0.8000 1.0000 2.0000 0.0000 Constraint 349 581 0.8000 1.0000 2.0000 0.0000 Constraint 349 572 0.8000 1.0000 2.0000 0.0000 Constraint 349 559 0.8000 1.0000 2.0000 0.0000 Constraint 349 552 0.8000 1.0000 2.0000 0.0000 Constraint 349 543 0.8000 1.0000 2.0000 0.0000 Constraint 349 534 0.8000 1.0000 2.0000 0.0000 Constraint 349 526 0.8000 1.0000 2.0000 0.0000 Constraint 349 518 0.8000 1.0000 2.0000 0.0000 Constraint 349 509 0.8000 1.0000 2.0000 0.0000 Constraint 349 504 0.8000 1.0000 2.0000 0.0000 Constraint 349 497 0.8000 1.0000 2.0000 0.0000 Constraint 349 488 0.8000 1.0000 2.0000 0.0000 Constraint 349 481 0.8000 1.0000 2.0000 0.0000 Constraint 349 472 0.8000 1.0000 2.0000 0.0000 Constraint 349 465 0.8000 1.0000 2.0000 0.0000 Constraint 349 456 0.8000 1.0000 2.0000 0.0000 Constraint 349 443 0.8000 1.0000 2.0000 0.0000 Constraint 349 435 0.8000 1.0000 2.0000 0.0000 Constraint 349 429 0.8000 1.0000 2.0000 0.0000 Constraint 349 418 0.8000 1.0000 2.0000 0.0000 Constraint 349 406 0.8000 1.0000 2.0000 0.0000 Constraint 349 399 0.8000 1.0000 2.0000 0.0000 Constraint 349 388 0.8000 1.0000 2.0000 0.0000 Constraint 349 380 0.8000 1.0000 2.0000 0.0000 Constraint 349 371 0.8000 1.0000 2.0000 0.0000 Constraint 349 363 0.8000 1.0000 2.0000 0.0000 Constraint 349 354 0.8000 1.0000 2.0000 0.0000 Constraint 342 692 0.8000 1.0000 2.0000 0.0000 Constraint 342 683 0.8000 1.0000 2.0000 0.0000 Constraint 342 625 0.8000 1.0000 2.0000 0.0000 Constraint 342 588 0.8000 1.0000 2.0000 0.0000 Constraint 342 581 0.8000 1.0000 2.0000 0.0000 Constraint 342 572 0.8000 1.0000 2.0000 0.0000 Constraint 342 559 0.8000 1.0000 2.0000 0.0000 Constraint 342 552 0.8000 1.0000 2.0000 0.0000 Constraint 342 543 0.8000 1.0000 2.0000 0.0000 Constraint 342 534 0.8000 1.0000 2.0000 0.0000 Constraint 342 526 0.8000 1.0000 2.0000 0.0000 Constraint 342 518 0.8000 1.0000 2.0000 0.0000 Constraint 342 509 0.8000 1.0000 2.0000 0.0000 Constraint 342 504 0.8000 1.0000 2.0000 0.0000 Constraint 342 497 0.8000 1.0000 2.0000 0.0000 Constraint 342 488 0.8000 1.0000 2.0000 0.0000 Constraint 342 481 0.8000 1.0000 2.0000 0.0000 Constraint 342 472 0.8000 1.0000 2.0000 0.0000 Constraint 342 465 0.8000 1.0000 2.0000 0.0000 Constraint 342 456 0.8000 1.0000 2.0000 0.0000 Constraint 342 443 0.8000 1.0000 2.0000 0.0000 Constraint 342 435 0.8000 1.0000 2.0000 0.0000 Constraint 342 429 0.8000 1.0000 2.0000 0.0000 Constraint 342 418 0.8000 1.0000 2.0000 0.0000 Constraint 342 406 0.8000 1.0000 2.0000 0.0000 Constraint 342 399 0.8000 1.0000 2.0000 0.0000 Constraint 342 388 0.8000 1.0000 2.0000 0.0000 Constraint 342 380 0.8000 1.0000 2.0000 0.0000 Constraint 342 371 0.8000 1.0000 2.0000 0.0000 Constraint 342 363 0.8000 1.0000 2.0000 0.0000 Constraint 342 354 0.8000 1.0000 2.0000 0.0000 Constraint 342 349 0.8000 1.0000 2.0000 0.0000 Constraint 335 692 0.8000 1.0000 2.0000 0.0000 Constraint 335 671 0.8000 1.0000 2.0000 0.0000 Constraint 335 659 0.8000 1.0000 2.0000 0.0000 Constraint 335 650 0.8000 1.0000 2.0000 0.0000 Constraint 335 642 0.8000 1.0000 2.0000 0.0000 Constraint 335 625 0.8000 1.0000 2.0000 0.0000 Constraint 335 588 0.8000 1.0000 2.0000 0.0000 Constraint 335 581 0.8000 1.0000 2.0000 0.0000 Constraint 335 572 0.8000 1.0000 2.0000 0.0000 Constraint 335 559 0.8000 1.0000 2.0000 0.0000 Constraint 335 552 0.8000 1.0000 2.0000 0.0000 Constraint 335 543 0.8000 1.0000 2.0000 0.0000 Constraint 335 534 0.8000 1.0000 2.0000 0.0000 Constraint 335 526 0.8000 1.0000 2.0000 0.0000 Constraint 335 518 0.8000 1.0000 2.0000 0.0000 Constraint 335 509 0.8000 1.0000 2.0000 0.0000 Constraint 335 504 0.8000 1.0000 2.0000 0.0000 Constraint 335 497 0.8000 1.0000 2.0000 0.0000 Constraint 335 488 0.8000 1.0000 2.0000 0.0000 Constraint 335 481 0.8000 1.0000 2.0000 0.0000 Constraint 335 472 0.8000 1.0000 2.0000 0.0000 Constraint 335 465 0.8000 1.0000 2.0000 0.0000 Constraint 335 456 0.8000 1.0000 2.0000 0.0000 Constraint 335 443 0.8000 1.0000 2.0000 0.0000 Constraint 335 435 0.8000 1.0000 2.0000 0.0000 Constraint 335 429 0.8000 1.0000 2.0000 0.0000 Constraint 335 418 0.8000 1.0000 2.0000 0.0000 Constraint 335 406 0.8000 1.0000 2.0000 0.0000 Constraint 335 399 0.8000 1.0000 2.0000 0.0000 Constraint 335 388 0.8000 1.0000 2.0000 0.0000 Constraint 335 380 0.8000 1.0000 2.0000 0.0000 Constraint 335 371 0.8000 1.0000 2.0000 0.0000 Constraint 335 363 0.8000 1.0000 2.0000 0.0000 Constraint 335 354 0.8000 1.0000 2.0000 0.0000 Constraint 335 349 0.8000 1.0000 2.0000 0.0000 Constraint 335 342 0.8000 1.0000 2.0000 0.0000 Constraint 323 692 0.8000 1.0000 2.0000 0.0000 Constraint 323 642 0.8000 1.0000 2.0000 0.0000 Constraint 323 633 0.8000 1.0000 2.0000 0.0000 Constraint 323 625 0.8000 1.0000 2.0000 0.0000 Constraint 323 603 0.8000 1.0000 2.0000 0.0000 Constraint 323 588 0.8000 1.0000 2.0000 0.0000 Constraint 323 581 0.8000 1.0000 2.0000 0.0000 Constraint 323 572 0.8000 1.0000 2.0000 0.0000 Constraint 323 559 0.8000 1.0000 2.0000 0.0000 Constraint 323 552 0.8000 1.0000 2.0000 0.0000 Constraint 323 543 0.8000 1.0000 2.0000 0.0000 Constraint 323 534 0.8000 1.0000 2.0000 0.0000 Constraint 323 526 0.8000 1.0000 2.0000 0.0000 Constraint 323 518 0.8000 1.0000 2.0000 0.0000 Constraint 323 509 0.8000 1.0000 2.0000 0.0000 Constraint 323 504 0.8000 1.0000 2.0000 0.0000 Constraint 323 497 0.8000 1.0000 2.0000 0.0000 Constraint 323 488 0.8000 1.0000 2.0000 0.0000 Constraint 323 481 0.8000 1.0000 2.0000 0.0000 Constraint 323 472 0.8000 1.0000 2.0000 0.0000 Constraint 323 465 0.8000 1.0000 2.0000 0.0000 Constraint 323 456 0.8000 1.0000 2.0000 0.0000 Constraint 323 443 0.8000 1.0000 2.0000 0.0000 Constraint 323 435 0.8000 1.0000 2.0000 0.0000 Constraint 323 429 0.8000 1.0000 2.0000 0.0000 Constraint 323 418 0.8000 1.0000 2.0000 0.0000 Constraint 323 406 0.8000 1.0000 2.0000 0.0000 Constraint 323 399 0.8000 1.0000 2.0000 0.0000 Constraint 323 388 0.8000 1.0000 2.0000 0.0000 Constraint 323 380 0.8000 1.0000 2.0000 0.0000 Constraint 323 371 0.8000 1.0000 2.0000 0.0000 Constraint 323 363 0.8000 1.0000 2.0000 0.0000 Constraint 323 354 0.8000 1.0000 2.0000 0.0000 Constraint 323 349 0.8000 1.0000 2.0000 0.0000 Constraint 323 342 0.8000 1.0000 2.0000 0.0000 Constraint 323 335 0.8000 1.0000 2.0000 0.0000 Constraint 315 692 0.8000 1.0000 2.0000 0.0000 Constraint 315 659 0.8000 1.0000 2.0000 0.0000 Constraint 315 650 0.8000 1.0000 2.0000 0.0000 Constraint 315 642 0.8000 1.0000 2.0000 0.0000 Constraint 315 633 0.8000 1.0000 2.0000 0.0000 Constraint 315 625 0.8000 1.0000 2.0000 0.0000 Constraint 315 613 0.8000 1.0000 2.0000 0.0000 Constraint 315 603 0.8000 1.0000 2.0000 0.0000 Constraint 315 595 0.8000 1.0000 2.0000 0.0000 Constraint 315 588 0.8000 1.0000 2.0000 0.0000 Constraint 315 581 0.8000 1.0000 2.0000 0.0000 Constraint 315 572 0.8000 1.0000 2.0000 0.0000 Constraint 315 559 0.8000 1.0000 2.0000 0.0000 Constraint 315 552 0.8000 1.0000 2.0000 0.0000 Constraint 315 543 0.8000 1.0000 2.0000 0.0000 Constraint 315 534 0.8000 1.0000 2.0000 0.0000 Constraint 315 526 0.8000 1.0000 2.0000 0.0000 Constraint 315 518 0.8000 1.0000 2.0000 0.0000 Constraint 315 509 0.8000 1.0000 2.0000 0.0000 Constraint 315 504 0.8000 1.0000 2.0000 0.0000 Constraint 315 497 0.8000 1.0000 2.0000 0.0000 Constraint 315 488 0.8000 1.0000 2.0000 0.0000 Constraint 315 481 0.8000 1.0000 2.0000 0.0000 Constraint 315 472 0.8000 1.0000 2.0000 0.0000 Constraint 315 465 0.8000 1.0000 2.0000 0.0000 Constraint 315 456 0.8000 1.0000 2.0000 0.0000 Constraint 315 443 0.8000 1.0000 2.0000 0.0000 Constraint 315 435 0.8000 1.0000 2.0000 0.0000 Constraint 315 429 0.8000 1.0000 2.0000 0.0000 Constraint 315 418 0.8000 1.0000 2.0000 0.0000 Constraint 315 406 0.8000 1.0000 2.0000 0.0000 Constraint 315 399 0.8000 1.0000 2.0000 0.0000 Constraint 315 388 0.8000 1.0000 2.0000 0.0000 Constraint 315 380 0.8000 1.0000 2.0000 0.0000 Constraint 315 371 0.8000 1.0000 2.0000 0.0000 Constraint 315 363 0.8000 1.0000 2.0000 0.0000 Constraint 315 354 0.8000 1.0000 2.0000 0.0000 Constraint 315 349 0.8000 1.0000 2.0000 0.0000 Constraint 315 342 0.8000 1.0000 2.0000 0.0000 Constraint 315 335 0.8000 1.0000 2.0000 0.0000 Constraint 315 323 0.8000 1.0000 2.0000 0.0000 Constraint 310 692 0.8000 1.0000 2.0000 0.0000 Constraint 310 683 0.8000 1.0000 2.0000 0.0000 Constraint 310 671 0.8000 1.0000 2.0000 0.0000 Constraint 310 659 0.8000 1.0000 2.0000 0.0000 Constraint 310 650 0.8000 1.0000 2.0000 0.0000 Constraint 310 642 0.8000 1.0000 2.0000 0.0000 Constraint 310 633 0.8000 1.0000 2.0000 0.0000 Constraint 310 625 0.8000 1.0000 2.0000 0.0000 Constraint 310 613 0.8000 1.0000 2.0000 0.0000 Constraint 310 603 0.8000 1.0000 2.0000 0.0000 Constraint 310 595 0.8000 1.0000 2.0000 0.0000 Constraint 310 588 0.8000 1.0000 2.0000 0.0000 Constraint 310 581 0.8000 1.0000 2.0000 0.0000 Constraint 310 572 0.8000 1.0000 2.0000 0.0000 Constraint 310 559 0.8000 1.0000 2.0000 0.0000 Constraint 310 552 0.8000 1.0000 2.0000 0.0000 Constraint 310 543 0.8000 1.0000 2.0000 0.0000 Constraint 310 534 0.8000 1.0000 2.0000 0.0000 Constraint 310 526 0.8000 1.0000 2.0000 0.0000 Constraint 310 518 0.8000 1.0000 2.0000 0.0000 Constraint 310 509 0.8000 1.0000 2.0000 0.0000 Constraint 310 504 0.8000 1.0000 2.0000 0.0000 Constraint 310 497 0.8000 1.0000 2.0000 0.0000 Constraint 310 488 0.8000 1.0000 2.0000 0.0000 Constraint 310 481 0.8000 1.0000 2.0000 0.0000 Constraint 310 472 0.8000 1.0000 2.0000 0.0000 Constraint 310 465 0.8000 1.0000 2.0000 0.0000 Constraint 310 456 0.8000 1.0000 2.0000 0.0000 Constraint 310 443 0.8000 1.0000 2.0000 0.0000 Constraint 310 435 0.8000 1.0000 2.0000 0.0000 Constraint 310 429 0.8000 1.0000 2.0000 0.0000 Constraint 310 418 0.8000 1.0000 2.0000 0.0000 Constraint 310 406 0.8000 1.0000 2.0000 0.0000 Constraint 310 399 0.8000 1.0000 2.0000 0.0000 Constraint 310 388 0.8000 1.0000 2.0000 0.0000 Constraint 310 380 0.8000 1.0000 2.0000 0.0000 Constraint 310 371 0.8000 1.0000 2.0000 0.0000 Constraint 310 363 0.8000 1.0000 2.0000 0.0000 Constraint 310 354 0.8000 1.0000 2.0000 0.0000 Constraint 310 349 0.8000 1.0000 2.0000 0.0000 Constraint 310 342 0.8000 1.0000 2.0000 0.0000 Constraint 310 335 0.8000 1.0000 2.0000 0.0000 Constraint 310 323 0.8000 1.0000 2.0000 0.0000 Constraint 310 315 0.8000 1.0000 2.0000 0.0000 Constraint 305 692 0.8000 1.0000 2.0000 0.0000 Constraint 305 683 0.8000 1.0000 2.0000 0.0000 Constraint 305 659 0.8000 1.0000 2.0000 0.0000 Constraint 305 650 0.8000 1.0000 2.0000 0.0000 Constraint 305 642 0.8000 1.0000 2.0000 0.0000 Constraint 305 633 0.8000 1.0000 2.0000 0.0000 Constraint 305 625 0.8000 1.0000 2.0000 0.0000 Constraint 305 588 0.8000 1.0000 2.0000 0.0000 Constraint 305 581 0.8000 1.0000 2.0000 0.0000 Constraint 305 572 0.8000 1.0000 2.0000 0.0000 Constraint 305 559 0.8000 1.0000 2.0000 0.0000 Constraint 305 552 0.8000 1.0000 2.0000 0.0000 Constraint 305 543 0.8000 1.0000 2.0000 0.0000 Constraint 305 534 0.8000 1.0000 2.0000 0.0000 Constraint 305 526 0.8000 1.0000 2.0000 0.0000 Constraint 305 518 0.8000 1.0000 2.0000 0.0000 Constraint 305 509 0.8000 1.0000 2.0000 0.0000 Constraint 305 504 0.8000 1.0000 2.0000 0.0000 Constraint 305 497 0.8000 1.0000 2.0000 0.0000 Constraint 305 488 0.8000 1.0000 2.0000 0.0000 Constraint 305 481 0.8000 1.0000 2.0000 0.0000 Constraint 305 472 0.8000 1.0000 2.0000 0.0000 Constraint 305 465 0.8000 1.0000 2.0000 0.0000 Constraint 305 456 0.8000 1.0000 2.0000 0.0000 Constraint 305 443 0.8000 1.0000 2.0000 0.0000 Constraint 305 435 0.8000 1.0000 2.0000 0.0000 Constraint 305 429 0.8000 1.0000 2.0000 0.0000 Constraint 305 418 0.8000 1.0000 2.0000 0.0000 Constraint 305 406 0.8000 1.0000 2.0000 0.0000 Constraint 305 399 0.8000 1.0000 2.0000 0.0000 Constraint 305 388 0.8000 1.0000 2.0000 0.0000 Constraint 305 380 0.8000 1.0000 2.0000 0.0000 Constraint 305 371 0.8000 1.0000 2.0000 0.0000 Constraint 305 363 0.8000 1.0000 2.0000 0.0000 Constraint 305 354 0.8000 1.0000 2.0000 0.0000 Constraint 305 349 0.8000 1.0000 2.0000 0.0000 Constraint 305 342 0.8000 1.0000 2.0000 0.0000 Constraint 305 335 0.8000 1.0000 2.0000 0.0000 Constraint 305 323 0.8000 1.0000 2.0000 0.0000 Constraint 305 315 0.8000 1.0000 2.0000 0.0000 Constraint 305 310 0.8000 1.0000 2.0000 0.0000 Constraint 298 692 0.8000 1.0000 2.0000 0.0000 Constraint 298 659 0.8000 1.0000 2.0000 0.0000 Constraint 298 650 0.8000 1.0000 2.0000 0.0000 Constraint 298 642 0.8000 1.0000 2.0000 0.0000 Constraint 298 633 0.8000 1.0000 2.0000 0.0000 Constraint 298 625 0.8000 1.0000 2.0000 0.0000 Constraint 298 613 0.8000 1.0000 2.0000 0.0000 Constraint 298 603 0.8000 1.0000 2.0000 0.0000 Constraint 298 595 0.8000 1.0000 2.0000 0.0000 Constraint 298 588 0.8000 1.0000 2.0000 0.0000 Constraint 298 559 0.8000 1.0000 2.0000 0.0000 Constraint 298 552 0.8000 1.0000 2.0000 0.0000 Constraint 298 543 0.8000 1.0000 2.0000 0.0000 Constraint 298 534 0.8000 1.0000 2.0000 0.0000 Constraint 298 526 0.8000 1.0000 2.0000 0.0000 Constraint 298 518 0.8000 1.0000 2.0000 0.0000 Constraint 298 509 0.8000 1.0000 2.0000 0.0000 Constraint 298 504 0.8000 1.0000 2.0000 0.0000 Constraint 298 497 0.8000 1.0000 2.0000 0.0000 Constraint 298 488 0.8000 1.0000 2.0000 0.0000 Constraint 298 481 0.8000 1.0000 2.0000 0.0000 Constraint 298 472 0.8000 1.0000 2.0000 0.0000 Constraint 298 465 0.8000 1.0000 2.0000 0.0000 Constraint 298 456 0.8000 1.0000 2.0000 0.0000 Constraint 298 443 0.8000 1.0000 2.0000 0.0000 Constraint 298 435 0.8000 1.0000 2.0000 0.0000 Constraint 298 429 0.8000 1.0000 2.0000 0.0000 Constraint 298 418 0.8000 1.0000 2.0000 0.0000 Constraint 298 406 0.8000 1.0000 2.0000 0.0000 Constraint 298 399 0.8000 1.0000 2.0000 0.0000 Constraint 298 388 0.8000 1.0000 2.0000 0.0000 Constraint 298 380 0.8000 1.0000 2.0000 0.0000 Constraint 298 371 0.8000 1.0000 2.0000 0.0000 Constraint 298 363 0.8000 1.0000 2.0000 0.0000 Constraint 298 354 0.8000 1.0000 2.0000 0.0000 Constraint 298 349 0.8000 1.0000 2.0000 0.0000 Constraint 298 342 0.8000 1.0000 2.0000 0.0000 Constraint 298 335 0.8000 1.0000 2.0000 0.0000 Constraint 298 323 0.8000 1.0000 2.0000 0.0000 Constraint 298 315 0.8000 1.0000 2.0000 0.0000 Constraint 298 310 0.8000 1.0000 2.0000 0.0000 Constraint 298 305 0.8000 1.0000 2.0000 0.0000 Constraint 291 692 0.8000 1.0000 2.0000 0.0000 Constraint 291 683 0.8000 1.0000 2.0000 0.0000 Constraint 291 671 0.8000 1.0000 2.0000 0.0000 Constraint 291 659 0.8000 1.0000 2.0000 0.0000 Constraint 291 650 0.8000 1.0000 2.0000 0.0000 Constraint 291 642 0.8000 1.0000 2.0000 0.0000 Constraint 291 633 0.8000 1.0000 2.0000 0.0000 Constraint 291 625 0.8000 1.0000 2.0000 0.0000 Constraint 291 613 0.8000 1.0000 2.0000 0.0000 Constraint 291 603 0.8000 1.0000 2.0000 0.0000 Constraint 291 595 0.8000 1.0000 2.0000 0.0000 Constraint 291 588 0.8000 1.0000 2.0000 0.0000 Constraint 291 581 0.8000 1.0000 2.0000 0.0000 Constraint 291 572 0.8000 1.0000 2.0000 0.0000 Constraint 291 559 0.8000 1.0000 2.0000 0.0000 Constraint 291 552 0.8000 1.0000 2.0000 0.0000 Constraint 291 543 0.8000 1.0000 2.0000 0.0000 Constraint 291 534 0.8000 1.0000 2.0000 0.0000 Constraint 291 526 0.8000 1.0000 2.0000 0.0000 Constraint 291 518 0.8000 1.0000 2.0000 0.0000 Constraint 291 509 0.8000 1.0000 2.0000 0.0000 Constraint 291 504 0.8000 1.0000 2.0000 0.0000 Constraint 291 497 0.8000 1.0000 2.0000 0.0000 Constraint 291 488 0.8000 1.0000 2.0000 0.0000 Constraint 291 481 0.8000 1.0000 2.0000 0.0000 Constraint 291 472 0.8000 1.0000 2.0000 0.0000 Constraint 291 465 0.8000 1.0000 2.0000 0.0000 Constraint 291 456 0.8000 1.0000 2.0000 0.0000 Constraint 291 443 0.8000 1.0000 2.0000 0.0000 Constraint 291 435 0.8000 1.0000 2.0000 0.0000 Constraint 291 429 0.8000 1.0000 2.0000 0.0000 Constraint 291 418 0.8000 1.0000 2.0000 0.0000 Constraint 291 406 0.8000 1.0000 2.0000 0.0000 Constraint 291 399 0.8000 1.0000 2.0000 0.0000 Constraint 291 388 0.8000 1.0000 2.0000 0.0000 Constraint 291 380 0.8000 1.0000 2.0000 0.0000 Constraint 291 371 0.8000 1.0000 2.0000 0.0000 Constraint 291 363 0.8000 1.0000 2.0000 0.0000 Constraint 291 354 0.8000 1.0000 2.0000 0.0000 Constraint 291 349 0.8000 1.0000 2.0000 0.0000 Constraint 291 342 0.8000 1.0000 2.0000 0.0000 Constraint 291 335 0.8000 1.0000 2.0000 0.0000 Constraint 291 323 0.8000 1.0000 2.0000 0.0000 Constraint 291 315 0.8000 1.0000 2.0000 0.0000 Constraint 291 310 0.8000 1.0000 2.0000 0.0000 Constraint 291 305 0.8000 1.0000 2.0000 0.0000 Constraint 291 298 0.8000 1.0000 2.0000 0.0000 Constraint 283 692 0.8000 1.0000 2.0000 0.0000 Constraint 283 683 0.8000 1.0000 2.0000 0.0000 Constraint 283 671 0.8000 1.0000 2.0000 0.0000 Constraint 283 659 0.8000 1.0000 2.0000 0.0000 Constraint 283 650 0.8000 1.0000 2.0000 0.0000 Constraint 283 642 0.8000 1.0000 2.0000 0.0000 Constraint 283 633 0.8000 1.0000 2.0000 0.0000 Constraint 283 625 0.8000 1.0000 2.0000 0.0000 Constraint 283 613 0.8000 1.0000 2.0000 0.0000 Constraint 283 603 0.8000 1.0000 2.0000 0.0000 Constraint 283 595 0.8000 1.0000 2.0000 0.0000 Constraint 283 588 0.8000 1.0000 2.0000 0.0000 Constraint 283 581 0.8000 1.0000 2.0000 0.0000 Constraint 283 572 0.8000 1.0000 2.0000 0.0000 Constraint 283 559 0.8000 1.0000 2.0000 0.0000 Constraint 283 552 0.8000 1.0000 2.0000 0.0000 Constraint 283 543 0.8000 1.0000 2.0000 0.0000 Constraint 283 534 0.8000 1.0000 2.0000 0.0000 Constraint 283 526 0.8000 1.0000 2.0000 0.0000 Constraint 283 518 0.8000 1.0000 2.0000 0.0000 Constraint 283 509 0.8000 1.0000 2.0000 0.0000 Constraint 283 504 0.8000 1.0000 2.0000 0.0000 Constraint 283 497 0.8000 1.0000 2.0000 0.0000 Constraint 283 488 0.8000 1.0000 2.0000 0.0000 Constraint 283 481 0.8000 1.0000 2.0000 0.0000 Constraint 283 472 0.8000 1.0000 2.0000 0.0000 Constraint 283 465 0.8000 1.0000 2.0000 0.0000 Constraint 283 456 0.8000 1.0000 2.0000 0.0000 Constraint 283 443 0.8000 1.0000 2.0000 0.0000 Constraint 283 435 0.8000 1.0000 2.0000 0.0000 Constraint 283 429 0.8000 1.0000 2.0000 0.0000 Constraint 283 418 0.8000 1.0000 2.0000 0.0000 Constraint 283 406 0.8000 1.0000 2.0000 0.0000 Constraint 283 399 0.8000 1.0000 2.0000 0.0000 Constraint 283 388 0.8000 1.0000 2.0000 0.0000 Constraint 283 380 0.8000 1.0000 2.0000 0.0000 Constraint 283 371 0.8000 1.0000 2.0000 0.0000 Constraint 283 363 0.8000 1.0000 2.0000 0.0000 Constraint 283 354 0.8000 1.0000 2.0000 0.0000 Constraint 283 349 0.8000 1.0000 2.0000 0.0000 Constraint 283 342 0.8000 1.0000 2.0000 0.0000 Constraint 283 335 0.8000 1.0000 2.0000 0.0000 Constraint 283 323 0.8000 1.0000 2.0000 0.0000 Constraint 283 315 0.8000 1.0000 2.0000 0.0000 Constraint 283 310 0.8000 1.0000 2.0000 0.0000 Constraint 283 305 0.8000 1.0000 2.0000 0.0000 Constraint 283 298 0.8000 1.0000 2.0000 0.0000 Constraint 283 291 0.8000 1.0000 2.0000 0.0000 Constraint 275 692 0.8000 1.0000 2.0000 0.0000 Constraint 275 683 0.8000 1.0000 2.0000 0.0000 Constraint 275 671 0.8000 1.0000 2.0000 0.0000 Constraint 275 659 0.8000 1.0000 2.0000 0.0000 Constraint 275 650 0.8000 1.0000 2.0000 0.0000 Constraint 275 642 0.8000 1.0000 2.0000 0.0000 Constraint 275 633 0.8000 1.0000 2.0000 0.0000 Constraint 275 625 0.8000 1.0000 2.0000 0.0000 Constraint 275 613 0.8000 1.0000 2.0000 0.0000 Constraint 275 603 0.8000 1.0000 2.0000 0.0000 Constraint 275 595 0.8000 1.0000 2.0000 0.0000 Constraint 275 588 0.8000 1.0000 2.0000 0.0000 Constraint 275 581 0.8000 1.0000 2.0000 0.0000 Constraint 275 572 0.8000 1.0000 2.0000 0.0000 Constraint 275 559 0.8000 1.0000 2.0000 0.0000 Constraint 275 552 0.8000 1.0000 2.0000 0.0000 Constraint 275 543 0.8000 1.0000 2.0000 0.0000 Constraint 275 534 0.8000 1.0000 2.0000 0.0000 Constraint 275 526 0.8000 1.0000 2.0000 0.0000 Constraint 275 518 0.8000 1.0000 2.0000 0.0000 Constraint 275 509 0.8000 1.0000 2.0000 0.0000 Constraint 275 504 0.8000 1.0000 2.0000 0.0000 Constraint 275 497 0.8000 1.0000 2.0000 0.0000 Constraint 275 488 0.8000 1.0000 2.0000 0.0000 Constraint 275 481 0.8000 1.0000 2.0000 0.0000 Constraint 275 472 0.8000 1.0000 2.0000 0.0000 Constraint 275 465 0.8000 1.0000 2.0000 0.0000 Constraint 275 456 0.8000 1.0000 2.0000 0.0000 Constraint 275 443 0.8000 1.0000 2.0000 0.0000 Constraint 275 435 0.8000 1.0000 2.0000 0.0000 Constraint 275 429 0.8000 1.0000 2.0000 0.0000 Constraint 275 418 0.8000 1.0000 2.0000 0.0000 Constraint 275 406 0.8000 1.0000 2.0000 0.0000 Constraint 275 399 0.8000 1.0000 2.0000 0.0000 Constraint 275 388 0.8000 1.0000 2.0000 0.0000 Constraint 275 380 0.8000 1.0000 2.0000 0.0000 Constraint 275 371 0.8000 1.0000 2.0000 0.0000 Constraint 275 363 0.8000 1.0000 2.0000 0.0000 Constraint 275 354 0.8000 1.0000 2.0000 0.0000 Constraint 275 349 0.8000 1.0000 2.0000 0.0000 Constraint 275 342 0.8000 1.0000 2.0000 0.0000 Constraint 275 335 0.8000 1.0000 2.0000 0.0000 Constraint 275 323 0.8000 1.0000 2.0000 0.0000 Constraint 275 315 0.8000 1.0000 2.0000 0.0000 Constraint 275 310 0.8000 1.0000 2.0000 0.0000 Constraint 275 305 0.8000 1.0000 2.0000 0.0000 Constraint 275 298 0.8000 1.0000 2.0000 0.0000 Constraint 275 291 0.8000 1.0000 2.0000 0.0000 Constraint 275 283 0.8000 1.0000 2.0000 0.0000 Constraint 264 692 0.8000 1.0000 2.0000 0.0000 Constraint 264 683 0.8000 1.0000 2.0000 0.0000 Constraint 264 671 0.8000 1.0000 2.0000 0.0000 Constraint 264 659 0.8000 1.0000 2.0000 0.0000 Constraint 264 650 0.8000 1.0000 2.0000 0.0000 Constraint 264 642 0.8000 1.0000 2.0000 0.0000 Constraint 264 633 0.8000 1.0000 2.0000 0.0000 Constraint 264 625 0.8000 1.0000 2.0000 0.0000 Constraint 264 613 0.8000 1.0000 2.0000 0.0000 Constraint 264 603 0.8000 1.0000 2.0000 0.0000 Constraint 264 595 0.8000 1.0000 2.0000 0.0000 Constraint 264 588 0.8000 1.0000 2.0000 0.0000 Constraint 264 581 0.8000 1.0000 2.0000 0.0000 Constraint 264 572 0.8000 1.0000 2.0000 0.0000 Constraint 264 559 0.8000 1.0000 2.0000 0.0000 Constraint 264 552 0.8000 1.0000 2.0000 0.0000 Constraint 264 543 0.8000 1.0000 2.0000 0.0000 Constraint 264 534 0.8000 1.0000 2.0000 0.0000 Constraint 264 526 0.8000 1.0000 2.0000 0.0000 Constraint 264 518 0.8000 1.0000 2.0000 0.0000 Constraint 264 509 0.8000 1.0000 2.0000 0.0000 Constraint 264 504 0.8000 1.0000 2.0000 0.0000 Constraint 264 497 0.8000 1.0000 2.0000 0.0000 Constraint 264 488 0.8000 1.0000 2.0000 0.0000 Constraint 264 481 0.8000 1.0000 2.0000 0.0000 Constraint 264 472 0.8000 1.0000 2.0000 0.0000 Constraint 264 465 0.8000 1.0000 2.0000 0.0000 Constraint 264 456 0.8000 1.0000 2.0000 0.0000 Constraint 264 443 0.8000 1.0000 2.0000 0.0000 Constraint 264 435 0.8000 1.0000 2.0000 0.0000 Constraint 264 429 0.8000 1.0000 2.0000 0.0000 Constraint 264 418 0.8000 1.0000 2.0000 0.0000 Constraint 264 406 0.8000 1.0000 2.0000 0.0000 Constraint 264 399 0.8000 1.0000 2.0000 0.0000 Constraint 264 388 0.8000 1.0000 2.0000 0.0000 Constraint 264 380 0.8000 1.0000 2.0000 0.0000 Constraint 264 371 0.8000 1.0000 2.0000 0.0000 Constraint 264 363 0.8000 1.0000 2.0000 0.0000 Constraint 264 349 0.8000 1.0000 2.0000 0.0000 Constraint 264 335 0.8000 1.0000 2.0000 0.0000 Constraint 264 323 0.8000 1.0000 2.0000 0.0000 Constraint 264 315 0.8000 1.0000 2.0000 0.0000 Constraint 264 310 0.8000 1.0000 2.0000 0.0000 Constraint 264 305 0.8000 1.0000 2.0000 0.0000 Constraint 264 298 0.8000 1.0000 2.0000 0.0000 Constraint 264 291 0.8000 1.0000 2.0000 0.0000 Constraint 264 283 0.8000 1.0000 2.0000 0.0000 Constraint 264 275 0.8000 1.0000 2.0000 0.0000 Constraint 257 692 0.8000 1.0000 2.0000 0.0000 Constraint 257 683 0.8000 1.0000 2.0000 0.0000 Constraint 257 671 0.8000 1.0000 2.0000 0.0000 Constraint 257 659 0.8000 1.0000 2.0000 0.0000 Constraint 257 650 0.8000 1.0000 2.0000 0.0000 Constraint 257 642 0.8000 1.0000 2.0000 0.0000 Constraint 257 633 0.8000 1.0000 2.0000 0.0000 Constraint 257 625 0.8000 1.0000 2.0000 0.0000 Constraint 257 613 0.8000 1.0000 2.0000 0.0000 Constraint 257 603 0.8000 1.0000 2.0000 0.0000 Constraint 257 595 0.8000 1.0000 2.0000 0.0000 Constraint 257 588 0.8000 1.0000 2.0000 0.0000 Constraint 257 581 0.8000 1.0000 2.0000 0.0000 Constraint 257 572 0.8000 1.0000 2.0000 0.0000 Constraint 257 559 0.8000 1.0000 2.0000 0.0000 Constraint 257 552 0.8000 1.0000 2.0000 0.0000 Constraint 257 543 0.8000 1.0000 2.0000 0.0000 Constraint 257 534 0.8000 1.0000 2.0000 0.0000 Constraint 257 526 0.8000 1.0000 2.0000 0.0000 Constraint 257 518 0.8000 1.0000 2.0000 0.0000 Constraint 257 509 0.8000 1.0000 2.0000 0.0000 Constraint 257 504 0.8000 1.0000 2.0000 0.0000 Constraint 257 497 0.8000 1.0000 2.0000 0.0000 Constraint 257 488 0.8000 1.0000 2.0000 0.0000 Constraint 257 481 0.8000 1.0000 2.0000 0.0000 Constraint 257 472 0.8000 1.0000 2.0000 0.0000 Constraint 257 465 0.8000 1.0000 2.0000 0.0000 Constraint 257 456 0.8000 1.0000 2.0000 0.0000 Constraint 257 443 0.8000 1.0000 2.0000 0.0000 Constraint 257 435 0.8000 1.0000 2.0000 0.0000 Constraint 257 429 0.8000 1.0000 2.0000 0.0000 Constraint 257 418 0.8000 1.0000 2.0000 0.0000 Constraint 257 406 0.8000 1.0000 2.0000 0.0000 Constraint 257 399 0.8000 1.0000 2.0000 0.0000 Constraint 257 388 0.8000 1.0000 2.0000 0.0000 Constraint 257 380 0.8000 1.0000 2.0000 0.0000 Constraint 257 371 0.8000 1.0000 2.0000 0.0000 Constraint 257 315 0.8000 1.0000 2.0000 0.0000 Constraint 257 310 0.8000 1.0000 2.0000 0.0000 Constraint 257 305 0.8000 1.0000 2.0000 0.0000 Constraint 257 298 0.8000 1.0000 2.0000 0.0000 Constraint 257 291 0.8000 1.0000 2.0000 0.0000 Constraint 257 283 0.8000 1.0000 2.0000 0.0000 Constraint 257 275 0.8000 1.0000 2.0000 0.0000 Constraint 257 264 0.8000 1.0000 2.0000 0.0000 Constraint 248 692 0.8000 1.0000 2.0000 0.0000 Constraint 248 683 0.8000 1.0000 2.0000 0.0000 Constraint 248 671 0.8000 1.0000 2.0000 0.0000 Constraint 248 659 0.8000 1.0000 2.0000 0.0000 Constraint 248 650 0.8000 1.0000 2.0000 0.0000 Constraint 248 642 0.8000 1.0000 2.0000 0.0000 Constraint 248 633 0.8000 1.0000 2.0000 0.0000 Constraint 248 625 0.8000 1.0000 2.0000 0.0000 Constraint 248 613 0.8000 1.0000 2.0000 0.0000 Constraint 248 603 0.8000 1.0000 2.0000 0.0000 Constraint 248 595 0.8000 1.0000 2.0000 0.0000 Constraint 248 588 0.8000 1.0000 2.0000 0.0000 Constraint 248 581 0.8000 1.0000 2.0000 0.0000 Constraint 248 572 0.8000 1.0000 2.0000 0.0000 Constraint 248 559 0.8000 1.0000 2.0000 0.0000 Constraint 248 552 0.8000 1.0000 2.0000 0.0000 Constraint 248 543 0.8000 1.0000 2.0000 0.0000 Constraint 248 534 0.8000 1.0000 2.0000 0.0000 Constraint 248 526 0.8000 1.0000 2.0000 0.0000 Constraint 248 518 0.8000 1.0000 2.0000 0.0000 Constraint 248 509 0.8000 1.0000 2.0000 0.0000 Constraint 248 504 0.8000 1.0000 2.0000 0.0000 Constraint 248 497 0.8000 1.0000 2.0000 0.0000 Constraint 248 488 0.8000 1.0000 2.0000 0.0000 Constraint 248 481 0.8000 1.0000 2.0000 0.0000 Constraint 248 472 0.8000 1.0000 2.0000 0.0000 Constraint 248 465 0.8000 1.0000 2.0000 0.0000 Constraint 248 456 0.8000 1.0000 2.0000 0.0000 Constraint 248 443 0.8000 1.0000 2.0000 0.0000 Constraint 248 435 0.8000 1.0000 2.0000 0.0000 Constraint 248 429 0.8000 1.0000 2.0000 0.0000 Constraint 248 418 0.8000 1.0000 2.0000 0.0000 Constraint 248 406 0.8000 1.0000 2.0000 0.0000 Constraint 248 399 0.8000 1.0000 2.0000 0.0000 Constraint 248 388 0.8000 1.0000 2.0000 0.0000 Constraint 248 380 0.8000 1.0000 2.0000 0.0000 Constraint 248 371 0.8000 1.0000 2.0000 0.0000 Constraint 248 363 0.8000 1.0000 2.0000 0.0000 Constraint 248 342 0.8000 1.0000 2.0000 0.0000 Constraint 248 335 0.8000 1.0000 2.0000 0.0000 Constraint 248 323 0.8000 1.0000 2.0000 0.0000 Constraint 248 315 0.8000 1.0000 2.0000 0.0000 Constraint 248 310 0.8000 1.0000 2.0000 0.0000 Constraint 248 305 0.8000 1.0000 2.0000 0.0000 Constraint 248 298 0.8000 1.0000 2.0000 0.0000 Constraint 248 291 0.8000 1.0000 2.0000 0.0000 Constraint 248 283 0.8000 1.0000 2.0000 0.0000 Constraint 248 275 0.8000 1.0000 2.0000 0.0000 Constraint 248 264 0.8000 1.0000 2.0000 0.0000 Constraint 248 257 0.8000 1.0000 2.0000 0.0000 Constraint 241 692 0.8000 1.0000 2.0000 0.0000 Constraint 241 683 0.8000 1.0000 2.0000 0.0000 Constraint 241 659 0.8000 1.0000 2.0000 0.0000 Constraint 241 650 0.8000 1.0000 2.0000 0.0000 Constraint 241 633 0.8000 1.0000 2.0000 0.0000 Constraint 241 625 0.8000 1.0000 2.0000 0.0000 Constraint 241 613 0.8000 1.0000 2.0000 0.0000 Constraint 241 603 0.8000 1.0000 2.0000 0.0000 Constraint 241 595 0.8000 1.0000 2.0000 0.0000 Constraint 241 588 0.8000 1.0000 2.0000 0.0000 Constraint 241 581 0.8000 1.0000 2.0000 0.0000 Constraint 241 572 0.8000 1.0000 2.0000 0.0000 Constraint 241 559 0.8000 1.0000 2.0000 0.0000 Constraint 241 552 0.8000 1.0000 2.0000 0.0000 Constraint 241 543 0.8000 1.0000 2.0000 0.0000 Constraint 241 534 0.8000 1.0000 2.0000 0.0000 Constraint 241 526 0.8000 1.0000 2.0000 0.0000 Constraint 241 518 0.8000 1.0000 2.0000 0.0000 Constraint 241 509 0.8000 1.0000 2.0000 0.0000 Constraint 241 504 0.8000 1.0000 2.0000 0.0000 Constraint 241 497 0.8000 1.0000 2.0000 0.0000 Constraint 241 488 0.8000 1.0000 2.0000 0.0000 Constraint 241 481 0.8000 1.0000 2.0000 0.0000 Constraint 241 465 0.8000 1.0000 2.0000 0.0000 Constraint 241 456 0.8000 1.0000 2.0000 0.0000 Constraint 241 443 0.8000 1.0000 2.0000 0.0000 Constraint 241 435 0.8000 1.0000 2.0000 0.0000 Constraint 241 429 0.8000 1.0000 2.0000 0.0000 Constraint 241 418 0.8000 1.0000 2.0000 0.0000 Constraint 241 406 0.8000 1.0000 2.0000 0.0000 Constraint 241 399 0.8000 1.0000 2.0000 0.0000 Constraint 241 388 0.8000 1.0000 2.0000 0.0000 Constraint 241 380 0.8000 1.0000 2.0000 0.0000 Constraint 241 371 0.8000 1.0000 2.0000 0.0000 Constraint 241 363 0.8000 1.0000 2.0000 0.0000 Constraint 241 342 0.8000 1.0000 2.0000 0.0000 Constraint 241 335 0.8000 1.0000 2.0000 0.0000 Constraint 241 323 0.8000 1.0000 2.0000 0.0000 Constraint 241 315 0.8000 1.0000 2.0000 0.0000 Constraint 241 310 0.8000 1.0000 2.0000 0.0000 Constraint 241 305 0.8000 1.0000 2.0000 0.0000 Constraint 241 298 0.8000 1.0000 2.0000 0.0000 Constraint 241 291 0.8000 1.0000 2.0000 0.0000 Constraint 241 283 0.8000 1.0000 2.0000 0.0000 Constraint 241 275 0.8000 1.0000 2.0000 0.0000 Constraint 241 264 0.8000 1.0000 2.0000 0.0000 Constraint 241 257 0.8000 1.0000 2.0000 0.0000 Constraint 241 248 0.8000 1.0000 2.0000 0.0000 Constraint 233 692 0.8000 1.0000 2.0000 0.0000 Constraint 233 683 0.8000 1.0000 2.0000 0.0000 Constraint 233 671 0.8000 1.0000 2.0000 0.0000 Constraint 233 659 0.8000 1.0000 2.0000 0.0000 Constraint 233 650 0.8000 1.0000 2.0000 0.0000 Constraint 233 603 0.8000 1.0000 2.0000 0.0000 Constraint 233 588 0.8000 1.0000 2.0000 0.0000 Constraint 233 581 0.8000 1.0000 2.0000 0.0000 Constraint 233 572 0.8000 1.0000 2.0000 0.0000 Constraint 233 559 0.8000 1.0000 2.0000 0.0000 Constraint 233 552 0.8000 1.0000 2.0000 0.0000 Constraint 233 543 0.8000 1.0000 2.0000 0.0000 Constraint 233 534 0.8000 1.0000 2.0000 0.0000 Constraint 233 526 0.8000 1.0000 2.0000 0.0000 Constraint 233 518 0.8000 1.0000 2.0000 0.0000 Constraint 233 509 0.8000 1.0000 2.0000 0.0000 Constraint 233 504 0.8000 1.0000 2.0000 0.0000 Constraint 233 497 0.8000 1.0000 2.0000 0.0000 Constraint 233 488 0.8000 1.0000 2.0000 0.0000 Constraint 233 481 0.8000 1.0000 2.0000 0.0000 Constraint 233 472 0.8000 1.0000 2.0000 0.0000 Constraint 233 465 0.8000 1.0000 2.0000 0.0000 Constraint 233 443 0.8000 1.0000 2.0000 0.0000 Constraint 233 435 0.8000 1.0000 2.0000 0.0000 Constraint 233 429 0.8000 1.0000 2.0000 0.0000 Constraint 233 418 0.8000 1.0000 2.0000 0.0000 Constraint 233 406 0.8000 1.0000 2.0000 0.0000 Constraint 233 399 0.8000 1.0000 2.0000 0.0000 Constraint 233 388 0.8000 1.0000 2.0000 0.0000 Constraint 233 323 0.8000 1.0000 2.0000 0.0000 Constraint 233 315 0.8000 1.0000 2.0000 0.0000 Constraint 233 310 0.8000 1.0000 2.0000 0.0000 Constraint 233 298 0.8000 1.0000 2.0000 0.0000 Constraint 233 291 0.8000 1.0000 2.0000 0.0000 Constraint 233 283 0.8000 1.0000 2.0000 0.0000 Constraint 233 275 0.8000 1.0000 2.0000 0.0000 Constraint 233 264 0.8000 1.0000 2.0000 0.0000 Constraint 233 257 0.8000 1.0000 2.0000 0.0000 Constraint 233 248 0.8000 1.0000 2.0000 0.0000 Constraint 233 241 0.8000 1.0000 2.0000 0.0000 Constraint 221 692 0.8000 1.0000 2.0000 0.0000 Constraint 221 683 0.8000 1.0000 2.0000 0.0000 Constraint 221 659 0.8000 1.0000 2.0000 0.0000 Constraint 221 603 0.8000 1.0000 2.0000 0.0000 Constraint 221 595 0.8000 1.0000 2.0000 0.0000 Constraint 221 588 0.8000 1.0000 2.0000 0.0000 Constraint 221 581 0.8000 1.0000 2.0000 0.0000 Constraint 221 572 0.8000 1.0000 2.0000 0.0000 Constraint 221 559 0.8000 1.0000 2.0000 0.0000 Constraint 221 552 0.8000 1.0000 2.0000 0.0000 Constraint 221 543 0.8000 1.0000 2.0000 0.0000 Constraint 221 534 0.8000 1.0000 2.0000 0.0000 Constraint 221 526 0.8000 1.0000 2.0000 0.0000 Constraint 221 518 0.8000 1.0000 2.0000 0.0000 Constraint 221 509 0.8000 1.0000 2.0000 0.0000 Constraint 221 497 0.8000 1.0000 2.0000 0.0000 Constraint 221 488 0.8000 1.0000 2.0000 0.0000 Constraint 221 481 0.8000 1.0000 2.0000 0.0000 Constraint 221 465 0.8000 1.0000 2.0000 0.0000 Constraint 221 443 0.8000 1.0000 2.0000 0.0000 Constraint 221 435 0.8000 1.0000 2.0000 0.0000 Constraint 221 429 0.8000 1.0000 2.0000 0.0000 Constraint 221 418 0.8000 1.0000 2.0000 0.0000 Constraint 221 406 0.8000 1.0000 2.0000 0.0000 Constraint 221 399 0.8000 1.0000 2.0000 0.0000 Constraint 221 388 0.8000 1.0000 2.0000 0.0000 Constraint 221 349 0.8000 1.0000 2.0000 0.0000 Constraint 221 342 0.8000 1.0000 2.0000 0.0000 Constraint 221 335 0.8000 1.0000 2.0000 0.0000 Constraint 221 323 0.8000 1.0000 2.0000 0.0000 Constraint 221 315 0.8000 1.0000 2.0000 0.0000 Constraint 221 310 0.8000 1.0000 2.0000 0.0000 Constraint 221 305 0.8000 1.0000 2.0000 0.0000 Constraint 221 298 0.8000 1.0000 2.0000 0.0000 Constraint 221 291 0.8000 1.0000 2.0000 0.0000 Constraint 221 283 0.8000 1.0000 2.0000 0.0000 Constraint 221 275 0.8000 1.0000 2.0000 0.0000 Constraint 221 264 0.8000 1.0000 2.0000 0.0000 Constraint 221 257 0.8000 1.0000 2.0000 0.0000 Constraint 221 248 0.8000 1.0000 2.0000 0.0000 Constraint 221 241 0.8000 1.0000 2.0000 0.0000 Constraint 221 233 0.8000 1.0000 2.0000 0.0000 Constraint 213 692 0.8000 1.0000 2.0000 0.0000 Constraint 213 683 0.8000 1.0000 2.0000 0.0000 Constraint 213 671 0.8000 1.0000 2.0000 0.0000 Constraint 213 659 0.8000 1.0000 2.0000 0.0000 Constraint 213 650 0.8000 1.0000 2.0000 0.0000 Constraint 213 642 0.8000 1.0000 2.0000 0.0000 Constraint 213 633 0.8000 1.0000 2.0000 0.0000 Constraint 213 625 0.8000 1.0000 2.0000 0.0000 Constraint 213 613 0.8000 1.0000 2.0000 0.0000 Constraint 213 603 0.8000 1.0000 2.0000 0.0000 Constraint 213 595 0.8000 1.0000 2.0000 0.0000 Constraint 213 588 0.8000 1.0000 2.0000 0.0000 Constraint 213 581 0.8000 1.0000 2.0000 0.0000 Constraint 213 572 0.8000 1.0000 2.0000 0.0000 Constraint 213 559 0.8000 1.0000 2.0000 0.0000 Constraint 213 552 0.8000 1.0000 2.0000 0.0000 Constraint 213 543 0.8000 1.0000 2.0000 0.0000 Constraint 213 534 0.8000 1.0000 2.0000 0.0000 Constraint 213 509 0.8000 1.0000 2.0000 0.0000 Constraint 213 429 0.8000 1.0000 2.0000 0.0000 Constraint 213 418 0.8000 1.0000 2.0000 0.0000 Constraint 213 406 0.8000 1.0000 2.0000 0.0000 Constraint 213 363 0.8000 1.0000 2.0000 0.0000 Constraint 213 354 0.8000 1.0000 2.0000 0.0000 Constraint 213 349 0.8000 1.0000 2.0000 0.0000 Constraint 213 342 0.8000 1.0000 2.0000 0.0000 Constraint 213 335 0.8000 1.0000 2.0000 0.0000 Constraint 213 323 0.8000 1.0000 2.0000 0.0000 Constraint 213 315 0.8000 1.0000 2.0000 0.0000 Constraint 213 310 0.8000 1.0000 2.0000 0.0000 Constraint 213 305 0.8000 1.0000 2.0000 0.0000 Constraint 213 298 0.8000 1.0000 2.0000 0.0000 Constraint 213 291 0.8000 1.0000 2.0000 0.0000 Constraint 213 283 0.8000 1.0000 2.0000 0.0000 Constraint 213 275 0.8000 1.0000 2.0000 0.0000 Constraint 213 264 0.8000 1.0000 2.0000 0.0000 Constraint 213 257 0.8000 1.0000 2.0000 0.0000 Constraint 213 248 0.8000 1.0000 2.0000 0.0000 Constraint 213 241 0.8000 1.0000 2.0000 0.0000 Constraint 213 233 0.8000 1.0000 2.0000 0.0000 Constraint 213 221 0.8000 1.0000 2.0000 0.0000 Constraint 207 692 0.8000 1.0000 2.0000 0.0000 Constraint 207 683 0.8000 1.0000 2.0000 0.0000 Constraint 207 603 0.8000 1.0000 2.0000 0.0000 Constraint 207 595 0.8000 1.0000 2.0000 0.0000 Constraint 207 588 0.8000 1.0000 2.0000 0.0000 Constraint 207 581 0.8000 1.0000 2.0000 0.0000 Constraint 207 572 0.8000 1.0000 2.0000 0.0000 Constraint 207 559 0.8000 1.0000 2.0000 0.0000 Constraint 207 552 0.8000 1.0000 2.0000 0.0000 Constraint 207 543 0.8000 1.0000 2.0000 0.0000 Constraint 207 534 0.8000 1.0000 2.0000 0.0000 Constraint 207 526 0.8000 1.0000 2.0000 0.0000 Constraint 207 518 0.8000 1.0000 2.0000 0.0000 Constraint 207 509 0.8000 1.0000 2.0000 0.0000 Constraint 207 504 0.8000 1.0000 2.0000 0.0000 Constraint 207 488 0.8000 1.0000 2.0000 0.0000 Constraint 207 481 0.8000 1.0000 2.0000 0.0000 Constraint 207 418 0.8000 1.0000 2.0000 0.0000 Constraint 207 406 0.8000 1.0000 2.0000 0.0000 Constraint 207 399 0.8000 1.0000 2.0000 0.0000 Constraint 207 363 0.8000 1.0000 2.0000 0.0000 Constraint 207 354 0.8000 1.0000 2.0000 0.0000 Constraint 207 349 0.8000 1.0000 2.0000 0.0000 Constraint 207 342 0.8000 1.0000 2.0000 0.0000 Constraint 207 335 0.8000 1.0000 2.0000 0.0000 Constraint 207 323 0.8000 1.0000 2.0000 0.0000 Constraint 207 315 0.8000 1.0000 2.0000 0.0000 Constraint 207 310 0.8000 1.0000 2.0000 0.0000 Constraint 207 305 0.8000 1.0000 2.0000 0.0000 Constraint 207 298 0.8000 1.0000 2.0000 0.0000 Constraint 207 291 0.8000 1.0000 2.0000 0.0000 Constraint 207 283 0.8000 1.0000 2.0000 0.0000 Constraint 207 275 0.8000 1.0000 2.0000 0.0000 Constraint 207 264 0.8000 1.0000 2.0000 0.0000 Constraint 207 257 0.8000 1.0000 2.0000 0.0000 Constraint 207 248 0.8000 1.0000 2.0000 0.0000 Constraint 207 241 0.8000 1.0000 2.0000 0.0000 Constraint 207 233 0.8000 1.0000 2.0000 0.0000 Constraint 207 221 0.8000 1.0000 2.0000 0.0000 Constraint 207 213 0.8000 1.0000 2.0000 0.0000 Constraint 200 692 0.8000 1.0000 2.0000 0.0000 Constraint 200 683 0.8000 1.0000 2.0000 0.0000 Constraint 200 671 0.8000 1.0000 2.0000 0.0000 Constraint 200 659 0.8000 1.0000 2.0000 0.0000 Constraint 200 642 0.8000 1.0000 2.0000 0.0000 Constraint 200 613 0.8000 1.0000 2.0000 0.0000 Constraint 200 603 0.8000 1.0000 2.0000 0.0000 Constraint 200 595 0.8000 1.0000 2.0000 0.0000 Constraint 200 588 0.8000 1.0000 2.0000 0.0000 Constraint 200 581 0.8000 1.0000 2.0000 0.0000 Constraint 200 572 0.8000 1.0000 2.0000 0.0000 Constraint 200 559 0.8000 1.0000 2.0000 0.0000 Constraint 200 552 0.8000 1.0000 2.0000 0.0000 Constraint 200 543 0.8000 1.0000 2.0000 0.0000 Constraint 200 534 0.8000 1.0000 2.0000 0.0000 Constraint 200 526 0.8000 1.0000 2.0000 0.0000 Constraint 200 518 0.8000 1.0000 2.0000 0.0000 Constraint 200 509 0.8000 1.0000 2.0000 0.0000 Constraint 200 504 0.8000 1.0000 2.0000 0.0000 Constraint 200 497 0.8000 1.0000 2.0000 0.0000 Constraint 200 488 0.8000 1.0000 2.0000 0.0000 Constraint 200 481 0.8000 1.0000 2.0000 0.0000 Constraint 200 418 0.8000 1.0000 2.0000 0.0000 Constraint 200 406 0.8000 1.0000 2.0000 0.0000 Constraint 200 399 0.8000 1.0000 2.0000 0.0000 Constraint 200 363 0.8000 1.0000 2.0000 0.0000 Constraint 200 354 0.8000 1.0000 2.0000 0.0000 Constraint 200 349 0.8000 1.0000 2.0000 0.0000 Constraint 200 342 0.8000 1.0000 2.0000 0.0000 Constraint 200 335 0.8000 1.0000 2.0000 0.0000 Constraint 200 323 0.8000 1.0000 2.0000 0.0000 Constraint 200 315 0.8000 1.0000 2.0000 0.0000 Constraint 200 310 0.8000 1.0000 2.0000 0.0000 Constraint 200 305 0.8000 1.0000 2.0000 0.0000 Constraint 200 298 0.8000 1.0000 2.0000 0.0000 Constraint 200 291 0.8000 1.0000 2.0000 0.0000 Constraint 200 283 0.8000 1.0000 2.0000 0.0000 Constraint 200 275 0.8000 1.0000 2.0000 0.0000 Constraint 200 264 0.8000 1.0000 2.0000 0.0000 Constraint 200 257 0.8000 1.0000 2.0000 0.0000 Constraint 200 248 0.8000 1.0000 2.0000 0.0000 Constraint 200 241 0.8000 1.0000 2.0000 0.0000 Constraint 200 233 0.8000 1.0000 2.0000 0.0000 Constraint 200 221 0.8000 1.0000 2.0000 0.0000 Constraint 200 213 0.8000 1.0000 2.0000 0.0000 Constraint 200 207 0.8000 1.0000 2.0000 0.0000 Constraint 194 692 0.8000 1.0000 2.0000 0.0000 Constraint 194 683 0.8000 1.0000 2.0000 0.0000 Constraint 194 671 0.8000 1.0000 2.0000 0.0000 Constraint 194 659 0.8000 1.0000 2.0000 0.0000 Constraint 194 650 0.8000 1.0000 2.0000 0.0000 Constraint 194 633 0.8000 1.0000 2.0000 0.0000 Constraint 194 613 0.8000 1.0000 2.0000 0.0000 Constraint 194 603 0.8000 1.0000 2.0000 0.0000 Constraint 194 595 0.8000 1.0000 2.0000 0.0000 Constraint 194 588 0.8000 1.0000 2.0000 0.0000 Constraint 194 581 0.8000 1.0000 2.0000 0.0000 Constraint 194 572 0.8000 1.0000 2.0000 0.0000 Constraint 194 559 0.8000 1.0000 2.0000 0.0000 Constraint 194 552 0.8000 1.0000 2.0000 0.0000 Constraint 194 543 0.8000 1.0000 2.0000 0.0000 Constraint 194 534 0.8000 1.0000 2.0000 0.0000 Constraint 194 526 0.8000 1.0000 2.0000 0.0000 Constraint 194 518 0.8000 1.0000 2.0000 0.0000 Constraint 194 509 0.8000 1.0000 2.0000 0.0000 Constraint 194 504 0.8000 1.0000 2.0000 0.0000 Constraint 194 418 0.8000 1.0000 2.0000 0.0000 Constraint 194 406 0.8000 1.0000 2.0000 0.0000 Constraint 194 399 0.8000 1.0000 2.0000 0.0000 Constraint 194 363 0.8000 1.0000 2.0000 0.0000 Constraint 194 354 0.8000 1.0000 2.0000 0.0000 Constraint 194 349 0.8000 1.0000 2.0000 0.0000 Constraint 194 342 0.8000 1.0000 2.0000 0.0000 Constraint 194 335 0.8000 1.0000 2.0000 0.0000 Constraint 194 323 0.8000 1.0000 2.0000 0.0000 Constraint 194 315 0.8000 1.0000 2.0000 0.0000 Constraint 194 310 0.8000 1.0000 2.0000 0.0000 Constraint 194 305 0.8000 1.0000 2.0000 0.0000 Constraint 194 298 0.8000 1.0000 2.0000 0.0000 Constraint 194 291 0.8000 1.0000 2.0000 0.0000 Constraint 194 283 0.8000 1.0000 2.0000 0.0000 Constraint 194 275 0.8000 1.0000 2.0000 0.0000 Constraint 194 264 0.8000 1.0000 2.0000 0.0000 Constraint 194 257 0.8000 1.0000 2.0000 0.0000 Constraint 194 248 0.8000 1.0000 2.0000 0.0000 Constraint 194 241 0.8000 1.0000 2.0000 0.0000 Constraint 194 233 0.8000 1.0000 2.0000 0.0000 Constraint 194 221 0.8000 1.0000 2.0000 0.0000 Constraint 194 213 0.8000 1.0000 2.0000 0.0000 Constraint 194 207 0.8000 1.0000 2.0000 0.0000 Constraint 194 200 0.8000 1.0000 2.0000 0.0000 Constraint 182 692 0.8000 1.0000 2.0000 0.0000 Constraint 182 683 0.8000 1.0000 2.0000 0.0000 Constraint 182 671 0.8000 1.0000 2.0000 0.0000 Constraint 182 659 0.8000 1.0000 2.0000 0.0000 Constraint 182 650 0.8000 1.0000 2.0000 0.0000 Constraint 182 633 0.8000 1.0000 2.0000 0.0000 Constraint 182 613 0.8000 1.0000 2.0000 0.0000 Constraint 182 603 0.8000 1.0000 2.0000 0.0000 Constraint 182 595 0.8000 1.0000 2.0000 0.0000 Constraint 182 588 0.8000 1.0000 2.0000 0.0000 Constraint 182 581 0.8000 1.0000 2.0000 0.0000 Constraint 182 572 0.8000 1.0000 2.0000 0.0000 Constraint 182 559 0.8000 1.0000 2.0000 0.0000 Constraint 182 552 0.8000 1.0000 2.0000 0.0000 Constraint 182 543 0.8000 1.0000 2.0000 0.0000 Constraint 182 534 0.8000 1.0000 2.0000 0.0000 Constraint 182 526 0.8000 1.0000 2.0000 0.0000 Constraint 182 518 0.8000 1.0000 2.0000 0.0000 Constraint 182 509 0.8000 1.0000 2.0000 0.0000 Constraint 182 504 0.8000 1.0000 2.0000 0.0000 Constraint 182 497 0.8000 1.0000 2.0000 0.0000 Constraint 182 488 0.8000 1.0000 2.0000 0.0000 Constraint 182 435 0.8000 1.0000 2.0000 0.0000 Constraint 182 429 0.8000 1.0000 2.0000 0.0000 Constraint 182 418 0.8000 1.0000 2.0000 0.0000 Constraint 182 406 0.8000 1.0000 2.0000 0.0000 Constraint 182 399 0.8000 1.0000 2.0000 0.0000 Constraint 182 380 0.8000 1.0000 2.0000 0.0000 Constraint 182 363 0.8000 1.0000 2.0000 0.0000 Constraint 182 354 0.8000 1.0000 2.0000 0.0000 Constraint 182 349 0.8000 1.0000 2.0000 0.0000 Constraint 182 342 0.8000 1.0000 2.0000 0.0000 Constraint 182 335 0.8000 1.0000 2.0000 0.0000 Constraint 182 323 0.8000 1.0000 2.0000 0.0000 Constraint 182 315 0.8000 1.0000 2.0000 0.0000 Constraint 182 310 0.8000 1.0000 2.0000 0.0000 Constraint 182 305 0.8000 1.0000 2.0000 0.0000 Constraint 182 298 0.8000 1.0000 2.0000 0.0000 Constraint 182 291 0.8000 1.0000 2.0000 0.0000 Constraint 182 283 0.8000 1.0000 2.0000 0.0000 Constraint 182 275 0.8000 1.0000 2.0000 0.0000 Constraint 182 264 0.8000 1.0000 2.0000 0.0000 Constraint 182 257 0.8000 1.0000 2.0000 0.0000 Constraint 182 248 0.8000 1.0000 2.0000 0.0000 Constraint 182 241 0.8000 1.0000 2.0000 0.0000 Constraint 182 233 0.8000 1.0000 2.0000 0.0000 Constraint 182 221 0.8000 1.0000 2.0000 0.0000 Constraint 182 213 0.8000 1.0000 2.0000 0.0000 Constraint 182 207 0.8000 1.0000 2.0000 0.0000 Constraint 182 200 0.8000 1.0000 2.0000 0.0000 Constraint 182 194 0.8000 1.0000 2.0000 0.0000 Constraint 173 692 0.8000 1.0000 2.0000 0.0000 Constraint 173 683 0.8000 1.0000 2.0000 0.0000 Constraint 173 671 0.8000 1.0000 2.0000 0.0000 Constraint 173 659 0.8000 1.0000 2.0000 0.0000 Constraint 173 650 0.8000 1.0000 2.0000 0.0000 Constraint 173 642 0.8000 1.0000 2.0000 0.0000 Constraint 173 633 0.8000 1.0000 2.0000 0.0000 Constraint 173 625 0.8000 1.0000 2.0000 0.0000 Constraint 173 613 0.8000 1.0000 2.0000 0.0000 Constraint 173 603 0.8000 1.0000 2.0000 0.0000 Constraint 173 595 0.8000 1.0000 2.0000 0.0000 Constraint 173 588 0.8000 1.0000 2.0000 0.0000 Constraint 173 581 0.8000 1.0000 2.0000 0.0000 Constraint 173 572 0.8000 1.0000 2.0000 0.0000 Constraint 173 559 0.8000 1.0000 2.0000 0.0000 Constraint 173 552 0.8000 1.0000 2.0000 0.0000 Constraint 173 543 0.8000 1.0000 2.0000 0.0000 Constraint 173 534 0.8000 1.0000 2.0000 0.0000 Constraint 173 526 0.8000 1.0000 2.0000 0.0000 Constraint 173 518 0.8000 1.0000 2.0000 0.0000 Constraint 173 509 0.8000 1.0000 2.0000 0.0000 Constraint 173 504 0.8000 1.0000 2.0000 0.0000 Constraint 173 429 0.8000 1.0000 2.0000 0.0000 Constraint 173 418 0.8000 1.0000 2.0000 0.0000 Constraint 173 406 0.8000 1.0000 2.0000 0.0000 Constraint 173 399 0.8000 1.0000 2.0000 0.0000 Constraint 173 388 0.8000 1.0000 2.0000 0.0000 Constraint 173 380 0.8000 1.0000 2.0000 0.0000 Constraint 173 363 0.8000 1.0000 2.0000 0.0000 Constraint 173 354 0.8000 1.0000 2.0000 0.0000 Constraint 173 349 0.8000 1.0000 2.0000 0.0000 Constraint 173 342 0.8000 1.0000 2.0000 0.0000 Constraint 173 335 0.8000 1.0000 2.0000 0.0000 Constraint 173 323 0.8000 1.0000 2.0000 0.0000 Constraint 173 315 0.8000 1.0000 2.0000 0.0000 Constraint 173 310 0.8000 1.0000 2.0000 0.0000 Constraint 173 305 0.8000 1.0000 2.0000 0.0000 Constraint 173 298 0.8000 1.0000 2.0000 0.0000 Constraint 173 291 0.8000 1.0000 2.0000 0.0000 Constraint 173 283 0.8000 1.0000 2.0000 0.0000 Constraint 173 275 0.8000 1.0000 2.0000 0.0000 Constraint 173 264 0.8000 1.0000 2.0000 0.0000 Constraint 173 257 0.8000 1.0000 2.0000 0.0000 Constraint 173 248 0.8000 1.0000 2.0000 0.0000 Constraint 173 241 0.8000 1.0000 2.0000 0.0000 Constraint 173 233 0.8000 1.0000 2.0000 0.0000 Constraint 173 221 0.8000 1.0000 2.0000 0.0000 Constraint 173 213 0.8000 1.0000 2.0000 0.0000 Constraint 173 207 0.8000 1.0000 2.0000 0.0000 Constraint 173 200 0.8000 1.0000 2.0000 0.0000 Constraint 173 194 0.8000 1.0000 2.0000 0.0000 Constraint 173 182 0.8000 1.0000 2.0000 0.0000 Constraint 168 692 0.8000 1.0000 2.0000 0.0000 Constraint 168 683 0.8000 1.0000 2.0000 0.0000 Constraint 168 671 0.8000 1.0000 2.0000 0.0000 Constraint 168 659 0.8000 1.0000 2.0000 0.0000 Constraint 168 613 0.8000 1.0000 2.0000 0.0000 Constraint 168 603 0.8000 1.0000 2.0000 0.0000 Constraint 168 595 0.8000 1.0000 2.0000 0.0000 Constraint 168 588 0.8000 1.0000 2.0000 0.0000 Constraint 168 581 0.8000 1.0000 2.0000 0.0000 Constraint 168 572 0.8000 1.0000 2.0000 0.0000 Constraint 168 559 0.8000 1.0000 2.0000 0.0000 Constraint 168 552 0.8000 1.0000 2.0000 0.0000 Constraint 168 543 0.8000 1.0000 2.0000 0.0000 Constraint 168 534 0.8000 1.0000 2.0000 0.0000 Constraint 168 526 0.8000 1.0000 2.0000 0.0000 Constraint 168 518 0.8000 1.0000 2.0000 0.0000 Constraint 168 509 0.8000 1.0000 2.0000 0.0000 Constraint 168 429 0.8000 1.0000 2.0000 0.0000 Constraint 168 418 0.8000 1.0000 2.0000 0.0000 Constraint 168 406 0.8000 1.0000 2.0000 0.0000 Constraint 168 399 0.8000 1.0000 2.0000 0.0000 Constraint 168 388 0.8000 1.0000 2.0000 0.0000 Constraint 168 349 0.8000 1.0000 2.0000 0.0000 Constraint 168 342 0.8000 1.0000 2.0000 0.0000 Constraint 168 335 0.8000 1.0000 2.0000 0.0000 Constraint 168 323 0.8000 1.0000 2.0000 0.0000 Constraint 168 315 0.8000 1.0000 2.0000 0.0000 Constraint 168 310 0.8000 1.0000 2.0000 0.0000 Constraint 168 305 0.8000 1.0000 2.0000 0.0000 Constraint 168 298 0.8000 1.0000 2.0000 0.0000 Constraint 168 291 0.8000 1.0000 2.0000 0.0000 Constraint 168 283 0.8000 1.0000 2.0000 0.0000 Constraint 168 275 0.8000 1.0000 2.0000 0.0000 Constraint 168 264 0.8000 1.0000 2.0000 0.0000 Constraint 168 257 0.8000 1.0000 2.0000 0.0000 Constraint 168 248 0.8000 1.0000 2.0000 0.0000 Constraint 168 233 0.8000 1.0000 2.0000 0.0000 Constraint 168 221 0.8000 1.0000 2.0000 0.0000 Constraint 168 213 0.8000 1.0000 2.0000 0.0000 Constraint 168 207 0.8000 1.0000 2.0000 0.0000 Constraint 168 200 0.8000 1.0000 2.0000 0.0000 Constraint 168 194 0.8000 1.0000 2.0000 0.0000 Constraint 168 182 0.8000 1.0000 2.0000 0.0000 Constraint 168 173 0.8000 1.0000 2.0000 0.0000 Constraint 148 692 0.8000 1.0000 2.0000 0.0000 Constraint 148 683 0.8000 1.0000 2.0000 0.0000 Constraint 148 671 0.8000 1.0000 2.0000 0.0000 Constraint 148 659 0.8000 1.0000 2.0000 0.0000 Constraint 148 650 0.8000 1.0000 2.0000 0.0000 Constraint 148 642 0.8000 1.0000 2.0000 0.0000 Constraint 148 633 0.8000 1.0000 2.0000 0.0000 Constraint 148 625 0.8000 1.0000 2.0000 0.0000 Constraint 148 613 0.8000 1.0000 2.0000 0.0000 Constraint 148 603 0.8000 1.0000 2.0000 0.0000 Constraint 148 595 0.8000 1.0000 2.0000 0.0000 Constraint 148 588 0.8000 1.0000 2.0000 0.0000 Constraint 148 572 0.8000 1.0000 2.0000 0.0000 Constraint 148 559 0.8000 1.0000 2.0000 0.0000 Constraint 148 552 0.8000 1.0000 2.0000 0.0000 Constraint 148 543 0.8000 1.0000 2.0000 0.0000 Constraint 148 534 0.8000 1.0000 2.0000 0.0000 Constraint 148 518 0.8000 1.0000 2.0000 0.0000 Constraint 148 509 0.8000 1.0000 2.0000 0.0000 Constraint 148 488 0.8000 1.0000 2.0000 0.0000 Constraint 148 481 0.8000 1.0000 2.0000 0.0000 Constraint 148 465 0.8000 1.0000 2.0000 0.0000 Constraint 148 443 0.8000 1.0000 2.0000 0.0000 Constraint 148 429 0.8000 1.0000 2.0000 0.0000 Constraint 148 418 0.8000 1.0000 2.0000 0.0000 Constraint 148 406 0.8000 1.0000 2.0000 0.0000 Constraint 148 388 0.8000 1.0000 2.0000 0.0000 Constraint 148 354 0.8000 1.0000 2.0000 0.0000 Constraint 148 349 0.8000 1.0000 2.0000 0.0000 Constraint 148 342 0.8000 1.0000 2.0000 0.0000 Constraint 148 335 0.8000 1.0000 2.0000 0.0000 Constraint 148 323 0.8000 1.0000 2.0000 0.0000 Constraint 148 315 0.8000 1.0000 2.0000 0.0000 Constraint 148 310 0.8000 1.0000 2.0000 0.0000 Constraint 148 283 0.8000 1.0000 2.0000 0.0000 Constraint 148 275 0.8000 1.0000 2.0000 0.0000 Constraint 148 264 0.8000 1.0000 2.0000 0.0000 Constraint 148 200 0.8000 1.0000 2.0000 0.0000 Constraint 148 194 0.8000 1.0000 2.0000 0.0000 Constraint 148 182 0.8000 1.0000 2.0000 0.0000 Constraint 148 173 0.8000 1.0000 2.0000 0.0000 Constraint 148 168 0.8000 1.0000 2.0000 0.0000 Constraint 142 692 0.8000 1.0000 2.0000 0.0000 Constraint 142 683 0.8000 1.0000 2.0000 0.0000 Constraint 142 671 0.8000 1.0000 2.0000 0.0000 Constraint 142 659 0.8000 1.0000 2.0000 0.0000 Constraint 142 650 0.8000 1.0000 2.0000 0.0000 Constraint 142 642 0.8000 1.0000 2.0000 0.0000 Constraint 142 633 0.8000 1.0000 2.0000 0.0000 Constraint 142 625 0.8000 1.0000 2.0000 0.0000 Constraint 142 613 0.8000 1.0000 2.0000 0.0000 Constraint 142 603 0.8000 1.0000 2.0000 0.0000 Constraint 142 595 0.8000 1.0000 2.0000 0.0000 Constraint 142 588 0.8000 1.0000 2.0000 0.0000 Constraint 142 581 0.8000 1.0000 2.0000 0.0000 Constraint 142 572 0.8000 1.0000 2.0000 0.0000 Constraint 142 559 0.8000 1.0000 2.0000 0.0000 Constraint 142 552 0.8000 1.0000 2.0000 0.0000 Constraint 142 543 0.8000 1.0000 2.0000 0.0000 Constraint 142 534 0.8000 1.0000 2.0000 0.0000 Constraint 142 518 0.8000 1.0000 2.0000 0.0000 Constraint 142 509 0.8000 1.0000 2.0000 0.0000 Constraint 142 497 0.8000 1.0000 2.0000 0.0000 Constraint 142 488 0.8000 1.0000 2.0000 0.0000 Constraint 142 481 0.8000 1.0000 2.0000 0.0000 Constraint 142 465 0.8000 1.0000 2.0000 0.0000 Constraint 142 443 0.8000 1.0000 2.0000 0.0000 Constraint 142 435 0.8000 1.0000 2.0000 0.0000 Constraint 142 429 0.8000 1.0000 2.0000 0.0000 Constraint 142 418 0.8000 1.0000 2.0000 0.0000 Constraint 142 406 0.8000 1.0000 2.0000 0.0000 Constraint 142 399 0.8000 1.0000 2.0000 0.0000 Constraint 142 388 0.8000 1.0000 2.0000 0.0000 Constraint 142 380 0.8000 1.0000 2.0000 0.0000 Constraint 142 371 0.8000 1.0000 2.0000 0.0000 Constraint 142 363 0.8000 1.0000 2.0000 0.0000 Constraint 142 349 0.8000 1.0000 2.0000 0.0000 Constraint 142 342 0.8000 1.0000 2.0000 0.0000 Constraint 142 335 0.8000 1.0000 2.0000 0.0000 Constraint 142 323 0.8000 1.0000 2.0000 0.0000 Constraint 142 315 0.8000 1.0000 2.0000 0.0000 Constraint 142 310 0.8000 1.0000 2.0000 0.0000 Constraint 142 305 0.8000 1.0000 2.0000 0.0000 Constraint 142 298 0.8000 1.0000 2.0000 0.0000 Constraint 142 291 0.8000 1.0000 2.0000 0.0000 Constraint 142 283 0.8000 1.0000 2.0000 0.0000 Constraint 142 207 0.8000 1.0000 2.0000 0.0000 Constraint 142 200 0.8000 1.0000 2.0000 0.0000 Constraint 142 194 0.8000 1.0000 2.0000 0.0000 Constraint 142 182 0.8000 1.0000 2.0000 0.0000 Constraint 142 173 0.8000 1.0000 2.0000 0.0000 Constraint 142 168 0.8000 1.0000 2.0000 0.0000 Constraint 142 148 0.8000 1.0000 2.0000 0.0000 Constraint 134 692 0.8000 1.0000 2.0000 0.0000 Constraint 134 683 0.8000 1.0000 2.0000 0.0000 Constraint 134 671 0.8000 1.0000 2.0000 0.0000 Constraint 134 659 0.8000 1.0000 2.0000 0.0000 Constraint 134 650 0.8000 1.0000 2.0000 0.0000 Constraint 134 642 0.8000 1.0000 2.0000 0.0000 Constraint 134 633 0.8000 1.0000 2.0000 0.0000 Constraint 134 625 0.8000 1.0000 2.0000 0.0000 Constraint 134 613 0.8000 1.0000 2.0000 0.0000 Constraint 134 588 0.8000 1.0000 2.0000 0.0000 Constraint 134 581 0.8000 1.0000 2.0000 0.0000 Constraint 134 572 0.8000 1.0000 2.0000 0.0000 Constraint 134 559 0.8000 1.0000 2.0000 0.0000 Constraint 134 552 0.8000 1.0000 2.0000 0.0000 Constraint 134 543 0.8000 1.0000 2.0000 0.0000 Constraint 134 534 0.8000 1.0000 2.0000 0.0000 Constraint 134 518 0.8000 1.0000 2.0000 0.0000 Constraint 134 509 0.8000 1.0000 2.0000 0.0000 Constraint 134 481 0.8000 1.0000 2.0000 0.0000 Constraint 134 465 0.8000 1.0000 2.0000 0.0000 Constraint 134 443 0.8000 1.0000 2.0000 0.0000 Constraint 134 435 0.8000 1.0000 2.0000 0.0000 Constraint 134 429 0.8000 1.0000 2.0000 0.0000 Constraint 134 418 0.8000 1.0000 2.0000 0.0000 Constraint 134 406 0.8000 1.0000 2.0000 0.0000 Constraint 134 399 0.8000 1.0000 2.0000 0.0000 Constraint 134 388 0.8000 1.0000 2.0000 0.0000 Constraint 134 371 0.8000 1.0000 2.0000 0.0000 Constraint 134 323 0.8000 1.0000 2.0000 0.0000 Constraint 134 315 0.8000 1.0000 2.0000 0.0000 Constraint 134 283 0.8000 1.0000 2.0000 0.0000 Constraint 134 207 0.8000 1.0000 2.0000 0.0000 Constraint 134 200 0.8000 1.0000 2.0000 0.0000 Constraint 134 194 0.8000 1.0000 2.0000 0.0000 Constraint 134 182 0.8000 1.0000 2.0000 0.0000 Constraint 134 173 0.8000 1.0000 2.0000 0.0000 Constraint 134 168 0.8000 1.0000 2.0000 0.0000 Constraint 134 148 0.8000 1.0000 2.0000 0.0000 Constraint 134 142 0.8000 1.0000 2.0000 0.0000 Constraint 122 692 0.8000 1.0000 2.0000 0.0000 Constraint 122 683 0.8000 1.0000 2.0000 0.0000 Constraint 122 671 0.8000 1.0000 2.0000 0.0000 Constraint 122 659 0.8000 1.0000 2.0000 0.0000 Constraint 122 650 0.8000 1.0000 2.0000 0.0000 Constraint 122 642 0.8000 1.0000 2.0000 0.0000 Constraint 122 633 0.8000 1.0000 2.0000 0.0000 Constraint 122 625 0.8000 1.0000 2.0000 0.0000 Constraint 122 572 0.8000 1.0000 2.0000 0.0000 Constraint 122 543 0.8000 1.0000 2.0000 0.0000 Constraint 122 518 0.8000 1.0000 2.0000 0.0000 Constraint 122 504 0.8000 1.0000 2.0000 0.0000 Constraint 122 472 0.8000 1.0000 2.0000 0.0000 Constraint 122 465 0.8000 1.0000 2.0000 0.0000 Constraint 122 456 0.8000 1.0000 2.0000 0.0000 Constraint 122 443 0.8000 1.0000 2.0000 0.0000 Constraint 122 435 0.8000 1.0000 2.0000 0.0000 Constraint 122 429 0.8000 1.0000 2.0000 0.0000 Constraint 122 418 0.8000 1.0000 2.0000 0.0000 Constraint 122 388 0.8000 1.0000 2.0000 0.0000 Constraint 122 371 0.8000 1.0000 2.0000 0.0000 Constraint 122 363 0.8000 1.0000 2.0000 0.0000 Constraint 122 354 0.8000 1.0000 2.0000 0.0000 Constraint 122 349 0.8000 1.0000 2.0000 0.0000 Constraint 122 323 0.8000 1.0000 2.0000 0.0000 Constraint 122 315 0.8000 1.0000 2.0000 0.0000 Constraint 122 310 0.8000 1.0000 2.0000 0.0000 Constraint 122 283 0.8000 1.0000 2.0000 0.0000 Constraint 122 248 0.8000 1.0000 2.0000 0.0000 Constraint 122 241 0.8000 1.0000 2.0000 0.0000 Constraint 122 213 0.8000 1.0000 2.0000 0.0000 Constraint 122 207 0.8000 1.0000 2.0000 0.0000 Constraint 122 200 0.8000 1.0000 2.0000 0.0000 Constraint 122 194 0.8000 1.0000 2.0000 0.0000 Constraint 122 168 0.8000 1.0000 2.0000 0.0000 Constraint 122 148 0.8000 1.0000 2.0000 0.0000 Constraint 122 142 0.8000 1.0000 2.0000 0.0000 Constraint 122 134 0.8000 1.0000 2.0000 0.0000 Constraint 114 692 0.8000 1.0000 2.0000 0.0000 Constraint 114 683 0.8000 1.0000 2.0000 0.0000 Constraint 114 671 0.8000 1.0000 2.0000 0.0000 Constraint 114 659 0.8000 1.0000 2.0000 0.0000 Constraint 114 650 0.8000 1.0000 2.0000 0.0000 Constraint 114 642 0.8000 1.0000 2.0000 0.0000 Constraint 114 633 0.8000 1.0000 2.0000 0.0000 Constraint 114 625 0.8000 1.0000 2.0000 0.0000 Constraint 114 613 0.8000 1.0000 2.0000 0.0000 Constraint 114 603 0.8000 1.0000 2.0000 0.0000 Constraint 114 588 0.8000 1.0000 2.0000 0.0000 Constraint 114 572 0.8000 1.0000 2.0000 0.0000 Constraint 114 543 0.8000 1.0000 2.0000 0.0000 Constraint 114 481 0.8000 1.0000 2.0000 0.0000 Constraint 114 472 0.8000 1.0000 2.0000 0.0000 Constraint 114 465 0.8000 1.0000 2.0000 0.0000 Constraint 114 456 0.8000 1.0000 2.0000 0.0000 Constraint 114 443 0.8000 1.0000 2.0000 0.0000 Constraint 114 435 0.8000 1.0000 2.0000 0.0000 Constraint 114 429 0.8000 1.0000 2.0000 0.0000 Constraint 114 418 0.8000 1.0000 2.0000 0.0000 Constraint 114 399 0.8000 1.0000 2.0000 0.0000 Constraint 114 388 0.8000 1.0000 2.0000 0.0000 Constraint 114 380 0.8000 1.0000 2.0000 0.0000 Constraint 114 371 0.8000 1.0000 2.0000 0.0000 Constraint 114 363 0.8000 1.0000 2.0000 0.0000 Constraint 114 354 0.8000 1.0000 2.0000 0.0000 Constraint 114 349 0.8000 1.0000 2.0000 0.0000 Constraint 114 342 0.8000 1.0000 2.0000 0.0000 Constraint 114 335 0.8000 1.0000 2.0000 0.0000 Constraint 114 323 0.8000 1.0000 2.0000 0.0000 Constraint 114 248 0.8000 1.0000 2.0000 0.0000 Constraint 114 241 0.8000 1.0000 2.0000 0.0000 Constraint 114 233 0.8000 1.0000 2.0000 0.0000 Constraint 114 221 0.8000 1.0000 2.0000 0.0000 Constraint 114 213 0.8000 1.0000 2.0000 0.0000 Constraint 114 207 0.8000 1.0000 2.0000 0.0000 Constraint 114 200 0.8000 1.0000 2.0000 0.0000 Constraint 114 194 0.8000 1.0000 2.0000 0.0000 Constraint 114 182 0.8000 1.0000 2.0000 0.0000 Constraint 114 173 0.8000 1.0000 2.0000 0.0000 Constraint 114 168 0.8000 1.0000 2.0000 0.0000 Constraint 114 148 0.8000 1.0000 2.0000 0.0000 Constraint 114 142 0.8000 1.0000 2.0000 0.0000 Constraint 114 134 0.8000 1.0000 2.0000 0.0000 Constraint 114 122 0.8000 1.0000 2.0000 0.0000 Constraint 106 692 0.8000 1.0000 2.0000 0.0000 Constraint 106 683 0.8000 1.0000 2.0000 0.0000 Constraint 106 671 0.8000 1.0000 2.0000 0.0000 Constraint 106 659 0.8000 1.0000 2.0000 0.0000 Constraint 106 650 0.8000 1.0000 2.0000 0.0000 Constraint 106 642 0.8000 1.0000 2.0000 0.0000 Constraint 106 633 0.8000 1.0000 2.0000 0.0000 Constraint 106 625 0.8000 1.0000 2.0000 0.0000 Constraint 106 613 0.8000 1.0000 2.0000 0.0000 Constraint 106 603 0.8000 1.0000 2.0000 0.0000 Constraint 106 588 0.8000 1.0000 2.0000 0.0000 Constraint 106 518 0.8000 1.0000 2.0000 0.0000 Constraint 106 509 0.8000 1.0000 2.0000 0.0000 Constraint 106 497 0.8000 1.0000 2.0000 0.0000 Constraint 106 488 0.8000 1.0000 2.0000 0.0000 Constraint 106 481 0.8000 1.0000 2.0000 0.0000 Constraint 106 472 0.8000 1.0000 2.0000 0.0000 Constraint 106 465 0.8000 1.0000 2.0000 0.0000 Constraint 106 456 0.8000 1.0000 2.0000 0.0000 Constraint 106 443 0.8000 1.0000 2.0000 0.0000 Constraint 106 435 0.8000 1.0000 2.0000 0.0000 Constraint 106 429 0.8000 1.0000 2.0000 0.0000 Constraint 106 418 0.8000 1.0000 2.0000 0.0000 Constraint 106 406 0.8000 1.0000 2.0000 0.0000 Constraint 106 399 0.8000 1.0000 2.0000 0.0000 Constraint 106 388 0.8000 1.0000 2.0000 0.0000 Constraint 106 380 0.8000 1.0000 2.0000 0.0000 Constraint 106 371 0.8000 1.0000 2.0000 0.0000 Constraint 106 363 0.8000 1.0000 2.0000 0.0000 Constraint 106 354 0.8000 1.0000 2.0000 0.0000 Constraint 106 349 0.8000 1.0000 2.0000 0.0000 Constraint 106 342 0.8000 1.0000 2.0000 0.0000 Constraint 106 335 0.8000 1.0000 2.0000 0.0000 Constraint 106 323 0.8000 1.0000 2.0000 0.0000 Constraint 106 315 0.8000 1.0000 2.0000 0.0000 Constraint 106 310 0.8000 1.0000 2.0000 0.0000 Constraint 106 275 0.8000 1.0000 2.0000 0.0000 Constraint 106 257 0.8000 1.0000 2.0000 0.0000 Constraint 106 248 0.8000 1.0000 2.0000 0.0000 Constraint 106 241 0.8000 1.0000 2.0000 0.0000 Constraint 106 233 0.8000 1.0000 2.0000 0.0000 Constraint 106 221 0.8000 1.0000 2.0000 0.0000 Constraint 106 213 0.8000 1.0000 2.0000 0.0000 Constraint 106 207 0.8000 1.0000 2.0000 0.0000 Constraint 106 200 0.8000 1.0000 2.0000 0.0000 Constraint 106 194 0.8000 1.0000 2.0000 0.0000 Constraint 106 148 0.8000 1.0000 2.0000 0.0000 Constraint 106 142 0.8000 1.0000 2.0000 0.0000 Constraint 106 134 0.8000 1.0000 2.0000 0.0000 Constraint 106 122 0.8000 1.0000 2.0000 0.0000 Constraint 106 114 0.8000 1.0000 2.0000 0.0000 Constraint 97 692 0.8000 1.0000 2.0000 0.0000 Constraint 97 683 0.8000 1.0000 2.0000 0.0000 Constraint 97 671 0.8000 1.0000 2.0000 0.0000 Constraint 97 659 0.8000 1.0000 2.0000 0.0000 Constraint 97 650 0.8000 1.0000 2.0000 0.0000 Constraint 97 633 0.8000 1.0000 2.0000 0.0000 Constraint 97 625 0.8000 1.0000 2.0000 0.0000 Constraint 97 613 0.8000 1.0000 2.0000 0.0000 Constraint 97 603 0.8000 1.0000 2.0000 0.0000 Constraint 97 595 0.8000 1.0000 2.0000 0.0000 Constraint 97 588 0.8000 1.0000 2.0000 0.0000 Constraint 97 581 0.8000 1.0000 2.0000 0.0000 Constraint 97 572 0.8000 1.0000 2.0000 0.0000 Constraint 97 518 0.8000 1.0000 2.0000 0.0000 Constraint 97 509 0.8000 1.0000 2.0000 0.0000 Constraint 97 497 0.8000 1.0000 2.0000 0.0000 Constraint 97 488 0.8000 1.0000 2.0000 0.0000 Constraint 97 481 0.8000 1.0000 2.0000 0.0000 Constraint 97 472 0.8000 1.0000 2.0000 0.0000 Constraint 97 465 0.8000 1.0000 2.0000 0.0000 Constraint 97 456 0.8000 1.0000 2.0000 0.0000 Constraint 97 443 0.8000 1.0000 2.0000 0.0000 Constraint 97 435 0.8000 1.0000 2.0000 0.0000 Constraint 97 429 0.8000 1.0000 2.0000 0.0000 Constraint 97 418 0.8000 1.0000 2.0000 0.0000 Constraint 97 406 0.8000 1.0000 2.0000 0.0000 Constraint 97 399 0.8000 1.0000 2.0000 0.0000 Constraint 97 388 0.8000 1.0000 2.0000 0.0000 Constraint 97 380 0.8000 1.0000 2.0000 0.0000 Constraint 97 371 0.8000 1.0000 2.0000 0.0000 Constraint 97 363 0.8000 1.0000 2.0000 0.0000 Constraint 97 354 0.8000 1.0000 2.0000 0.0000 Constraint 97 349 0.8000 1.0000 2.0000 0.0000 Constraint 97 342 0.8000 1.0000 2.0000 0.0000 Constraint 97 335 0.8000 1.0000 2.0000 0.0000 Constraint 97 323 0.8000 1.0000 2.0000 0.0000 Constraint 97 310 0.8000 1.0000 2.0000 0.0000 Constraint 97 305 0.8000 1.0000 2.0000 0.0000 Constraint 97 275 0.8000 1.0000 2.0000 0.0000 Constraint 97 257 0.8000 1.0000 2.0000 0.0000 Constraint 97 248 0.8000 1.0000 2.0000 0.0000 Constraint 97 241 0.8000 1.0000 2.0000 0.0000 Constraint 97 233 0.8000 1.0000 2.0000 0.0000 Constraint 97 221 0.8000 1.0000 2.0000 0.0000 Constraint 97 213 0.8000 1.0000 2.0000 0.0000 Constraint 97 207 0.8000 1.0000 2.0000 0.0000 Constraint 97 200 0.8000 1.0000 2.0000 0.0000 Constraint 97 194 0.8000 1.0000 2.0000 0.0000 Constraint 97 173 0.8000 1.0000 2.0000 0.0000 Constraint 97 168 0.8000 1.0000 2.0000 0.0000 Constraint 97 148 0.8000 1.0000 2.0000 0.0000 Constraint 97 142 0.8000 1.0000 2.0000 0.0000 Constraint 97 134 0.8000 1.0000 2.0000 0.0000 Constraint 97 122 0.8000 1.0000 2.0000 0.0000 Constraint 97 114 0.8000 1.0000 2.0000 0.0000 Constraint 97 106 0.8000 1.0000 2.0000 0.0000 Constraint 92 692 0.8000 1.0000 2.0000 0.0000 Constraint 92 683 0.8000 1.0000 2.0000 0.0000 Constraint 92 671 0.8000 1.0000 2.0000 0.0000 Constraint 92 659 0.8000 1.0000 2.0000 0.0000 Constraint 92 650 0.8000 1.0000 2.0000 0.0000 Constraint 92 642 0.8000 1.0000 2.0000 0.0000 Constraint 92 633 0.8000 1.0000 2.0000 0.0000 Constraint 92 625 0.8000 1.0000 2.0000 0.0000 Constraint 92 613 0.8000 1.0000 2.0000 0.0000 Constraint 92 603 0.8000 1.0000 2.0000 0.0000 Constraint 92 595 0.8000 1.0000 2.0000 0.0000 Constraint 92 588 0.8000 1.0000 2.0000 0.0000 Constraint 92 526 0.8000 1.0000 2.0000 0.0000 Constraint 92 518 0.8000 1.0000 2.0000 0.0000 Constraint 92 509 0.8000 1.0000 2.0000 0.0000 Constraint 92 504 0.8000 1.0000 2.0000 0.0000 Constraint 92 497 0.8000 1.0000 2.0000 0.0000 Constraint 92 488 0.8000 1.0000 2.0000 0.0000 Constraint 92 481 0.8000 1.0000 2.0000 0.0000 Constraint 92 472 0.8000 1.0000 2.0000 0.0000 Constraint 92 465 0.8000 1.0000 2.0000 0.0000 Constraint 92 456 0.8000 1.0000 2.0000 0.0000 Constraint 92 443 0.8000 1.0000 2.0000 0.0000 Constraint 92 435 0.8000 1.0000 2.0000 0.0000 Constraint 92 429 0.8000 1.0000 2.0000 0.0000 Constraint 92 418 0.8000 1.0000 2.0000 0.0000 Constraint 92 406 0.8000 1.0000 2.0000 0.0000 Constraint 92 399 0.8000 1.0000 2.0000 0.0000 Constraint 92 388 0.8000 1.0000 2.0000 0.0000 Constraint 92 380 0.8000 1.0000 2.0000 0.0000 Constraint 92 371 0.8000 1.0000 2.0000 0.0000 Constraint 92 363 0.8000 1.0000 2.0000 0.0000 Constraint 92 354 0.8000 1.0000 2.0000 0.0000 Constraint 92 349 0.8000 1.0000 2.0000 0.0000 Constraint 92 342 0.8000 1.0000 2.0000 0.0000 Constraint 92 335 0.8000 1.0000 2.0000 0.0000 Constraint 92 323 0.8000 1.0000 2.0000 0.0000 Constraint 92 275 0.8000 1.0000 2.0000 0.0000 Constraint 92 257 0.8000 1.0000 2.0000 0.0000 Constraint 92 248 0.8000 1.0000 2.0000 0.0000 Constraint 92 241 0.8000 1.0000 2.0000 0.0000 Constraint 92 233 0.8000 1.0000 2.0000 0.0000 Constraint 92 221 0.8000 1.0000 2.0000 0.0000 Constraint 92 213 0.8000 1.0000 2.0000 0.0000 Constraint 92 207 0.8000 1.0000 2.0000 0.0000 Constraint 92 200 0.8000 1.0000 2.0000 0.0000 Constraint 92 194 0.8000 1.0000 2.0000 0.0000 Constraint 92 182 0.8000 1.0000 2.0000 0.0000 Constraint 92 168 0.8000 1.0000 2.0000 0.0000 Constraint 92 148 0.8000 1.0000 2.0000 0.0000 Constraint 92 142 0.8000 1.0000 2.0000 0.0000 Constraint 92 134 0.8000 1.0000 2.0000 0.0000 Constraint 92 122 0.8000 1.0000 2.0000 0.0000 Constraint 92 114 0.8000 1.0000 2.0000 0.0000 Constraint 92 106 0.8000 1.0000 2.0000 0.0000 Constraint 92 97 0.8000 1.0000 2.0000 0.0000 Constraint 84 692 0.8000 1.0000 2.0000 0.0000 Constraint 84 683 0.8000 1.0000 2.0000 0.0000 Constraint 84 671 0.8000 1.0000 2.0000 0.0000 Constraint 84 659 0.8000 1.0000 2.0000 0.0000 Constraint 84 650 0.8000 1.0000 2.0000 0.0000 Constraint 84 642 0.8000 1.0000 2.0000 0.0000 Constraint 84 633 0.8000 1.0000 2.0000 0.0000 Constraint 84 625 0.8000 1.0000 2.0000 0.0000 Constraint 84 613 0.8000 1.0000 2.0000 0.0000 Constraint 84 603 0.8000 1.0000 2.0000 0.0000 Constraint 84 595 0.8000 1.0000 2.0000 0.0000 Constraint 84 518 0.8000 1.0000 2.0000 0.0000 Constraint 84 509 0.8000 1.0000 2.0000 0.0000 Constraint 84 504 0.8000 1.0000 2.0000 0.0000 Constraint 84 497 0.8000 1.0000 2.0000 0.0000 Constraint 84 488 0.8000 1.0000 2.0000 0.0000 Constraint 84 481 0.8000 1.0000 2.0000 0.0000 Constraint 84 472 0.8000 1.0000 2.0000 0.0000 Constraint 84 465 0.8000 1.0000 2.0000 0.0000 Constraint 84 456 0.8000 1.0000 2.0000 0.0000 Constraint 84 443 0.8000 1.0000 2.0000 0.0000 Constraint 84 435 0.8000 1.0000 2.0000 0.0000 Constraint 84 429 0.8000 1.0000 2.0000 0.0000 Constraint 84 418 0.8000 1.0000 2.0000 0.0000 Constraint 84 399 0.8000 1.0000 2.0000 0.0000 Constraint 84 388 0.8000 1.0000 2.0000 0.0000 Constraint 84 380 0.8000 1.0000 2.0000 0.0000 Constraint 84 371 0.8000 1.0000 2.0000 0.0000 Constraint 84 363 0.8000 1.0000 2.0000 0.0000 Constraint 84 354 0.8000 1.0000 2.0000 0.0000 Constraint 84 349 0.8000 1.0000 2.0000 0.0000 Constraint 84 342 0.8000 1.0000 2.0000 0.0000 Constraint 84 335 0.8000 1.0000 2.0000 0.0000 Constraint 84 257 0.8000 1.0000 2.0000 0.0000 Constraint 84 248 0.8000 1.0000 2.0000 0.0000 Constraint 84 241 0.8000 1.0000 2.0000 0.0000 Constraint 84 233 0.8000 1.0000 2.0000 0.0000 Constraint 84 221 0.8000 1.0000 2.0000 0.0000 Constraint 84 213 0.8000 1.0000 2.0000 0.0000 Constraint 84 207 0.8000 1.0000 2.0000 0.0000 Constraint 84 200 0.8000 1.0000 2.0000 0.0000 Constraint 84 194 0.8000 1.0000 2.0000 0.0000 Constraint 84 182 0.8000 1.0000 2.0000 0.0000 Constraint 84 173 0.8000 1.0000 2.0000 0.0000 Constraint 84 168 0.8000 1.0000 2.0000 0.0000 Constraint 84 148 0.8000 1.0000 2.0000 0.0000 Constraint 84 142 0.8000 1.0000 2.0000 0.0000 Constraint 84 134 0.8000 1.0000 2.0000 0.0000 Constraint 84 122 0.8000 1.0000 2.0000 0.0000 Constraint 84 114 0.8000 1.0000 2.0000 0.0000 Constraint 84 106 0.8000 1.0000 2.0000 0.0000 Constraint 84 97 0.8000 1.0000 2.0000 0.0000 Constraint 84 92 0.8000 1.0000 2.0000 0.0000 Constraint 75 692 0.8000 1.0000 2.0000 0.0000 Constraint 75 683 0.8000 1.0000 2.0000 0.0000 Constraint 75 671 0.8000 1.0000 2.0000 0.0000 Constraint 75 659 0.8000 1.0000 2.0000 0.0000 Constraint 75 650 0.8000 1.0000 2.0000 0.0000 Constraint 75 642 0.8000 1.0000 2.0000 0.0000 Constraint 75 633 0.8000 1.0000 2.0000 0.0000 Constraint 75 625 0.8000 1.0000 2.0000 0.0000 Constraint 75 613 0.8000 1.0000 2.0000 0.0000 Constraint 75 603 0.8000 1.0000 2.0000 0.0000 Constraint 75 543 0.8000 1.0000 2.0000 0.0000 Constraint 75 518 0.8000 1.0000 2.0000 0.0000 Constraint 75 509 0.8000 1.0000 2.0000 0.0000 Constraint 75 504 0.8000 1.0000 2.0000 0.0000 Constraint 75 497 0.8000 1.0000 2.0000 0.0000 Constraint 75 488 0.8000 1.0000 2.0000 0.0000 Constraint 75 481 0.8000 1.0000 2.0000 0.0000 Constraint 75 456 0.8000 1.0000 2.0000 0.0000 Constraint 75 443 0.8000 1.0000 2.0000 0.0000 Constraint 75 435 0.8000 1.0000 2.0000 0.0000 Constraint 75 429 0.8000 1.0000 2.0000 0.0000 Constraint 75 418 0.8000 1.0000 2.0000 0.0000 Constraint 75 399 0.8000 1.0000 2.0000 0.0000 Constraint 75 388 0.8000 1.0000 2.0000 0.0000 Constraint 75 380 0.8000 1.0000 2.0000 0.0000 Constraint 75 371 0.8000 1.0000 2.0000 0.0000 Constraint 75 363 0.8000 1.0000 2.0000 0.0000 Constraint 75 354 0.8000 1.0000 2.0000 0.0000 Constraint 75 349 0.8000 1.0000 2.0000 0.0000 Constraint 75 283 0.8000 1.0000 2.0000 0.0000 Constraint 75 275 0.8000 1.0000 2.0000 0.0000 Constraint 75 264 0.8000 1.0000 2.0000 0.0000 Constraint 75 257 0.8000 1.0000 2.0000 0.0000 Constraint 75 248 0.8000 1.0000 2.0000 0.0000 Constraint 75 241 0.8000 1.0000 2.0000 0.0000 Constraint 75 233 0.8000 1.0000 2.0000 0.0000 Constraint 75 194 0.8000 1.0000 2.0000 0.0000 Constraint 75 182 0.8000 1.0000 2.0000 0.0000 Constraint 75 173 0.8000 1.0000 2.0000 0.0000 Constraint 75 168 0.8000 1.0000 2.0000 0.0000 Constraint 75 148 0.8000 1.0000 2.0000 0.0000 Constraint 75 142 0.8000 1.0000 2.0000 0.0000 Constraint 75 134 0.8000 1.0000 2.0000 0.0000 Constraint 75 122 0.8000 1.0000 2.0000 0.0000 Constraint 75 114 0.8000 1.0000 2.0000 0.0000 Constraint 75 106 0.8000 1.0000 2.0000 0.0000 Constraint 75 97 0.8000 1.0000 2.0000 0.0000 Constraint 75 92 0.8000 1.0000 2.0000 0.0000 Constraint 75 84 0.8000 1.0000 2.0000 0.0000 Constraint 66 692 0.8000 1.0000 2.0000 0.0000 Constraint 66 683 0.8000 1.0000 2.0000 0.0000 Constraint 66 671 0.8000 1.0000 2.0000 0.0000 Constraint 66 659 0.8000 1.0000 2.0000 0.0000 Constraint 66 650 0.8000 1.0000 2.0000 0.0000 Constraint 66 642 0.8000 1.0000 2.0000 0.0000 Constraint 66 633 0.8000 1.0000 2.0000 0.0000 Constraint 66 625 0.8000 1.0000 2.0000 0.0000 Constraint 66 613 0.8000 1.0000 2.0000 0.0000 Constraint 66 543 0.8000 1.0000 2.0000 0.0000 Constraint 66 526 0.8000 1.0000 2.0000 0.0000 Constraint 66 518 0.8000 1.0000 2.0000 0.0000 Constraint 66 509 0.8000 1.0000 2.0000 0.0000 Constraint 66 504 0.8000 1.0000 2.0000 0.0000 Constraint 66 497 0.8000 1.0000 2.0000 0.0000 Constraint 66 488 0.8000 1.0000 2.0000 0.0000 Constraint 66 481 0.8000 1.0000 2.0000 0.0000 Constraint 66 465 0.8000 1.0000 2.0000 0.0000 Constraint 66 456 0.8000 1.0000 2.0000 0.0000 Constraint 66 443 0.8000 1.0000 2.0000 0.0000 Constraint 66 435 0.8000 1.0000 2.0000 0.0000 Constraint 66 429 0.8000 1.0000 2.0000 0.0000 Constraint 66 418 0.8000 1.0000 2.0000 0.0000 Constraint 66 388 0.8000 1.0000 2.0000 0.0000 Constraint 66 380 0.8000 1.0000 2.0000 0.0000 Constraint 66 371 0.8000 1.0000 2.0000 0.0000 Constraint 66 363 0.8000 1.0000 2.0000 0.0000 Constraint 66 354 0.8000 1.0000 2.0000 0.0000 Constraint 66 349 0.8000 1.0000 2.0000 0.0000 Constraint 66 283 0.8000 1.0000 2.0000 0.0000 Constraint 66 275 0.8000 1.0000 2.0000 0.0000 Constraint 66 264 0.8000 1.0000 2.0000 0.0000 Constraint 66 257 0.8000 1.0000 2.0000 0.0000 Constraint 66 248 0.8000 1.0000 2.0000 0.0000 Constraint 66 241 0.8000 1.0000 2.0000 0.0000 Constraint 66 233 0.8000 1.0000 2.0000 0.0000 Constraint 66 207 0.8000 1.0000 2.0000 0.0000 Constraint 66 200 0.8000 1.0000 2.0000 0.0000 Constraint 66 194 0.8000 1.0000 2.0000 0.0000 Constraint 66 182 0.8000 1.0000 2.0000 0.0000 Constraint 66 173 0.8000 1.0000 2.0000 0.0000 Constraint 66 168 0.8000 1.0000 2.0000 0.0000 Constraint 66 148 0.8000 1.0000 2.0000 0.0000 Constraint 66 142 0.8000 1.0000 2.0000 0.0000 Constraint 66 122 0.8000 1.0000 2.0000 0.0000 Constraint 66 114 0.8000 1.0000 2.0000 0.0000 Constraint 66 106 0.8000 1.0000 2.0000 0.0000 Constraint 66 97 0.8000 1.0000 2.0000 0.0000 Constraint 66 92 0.8000 1.0000 2.0000 0.0000 Constraint 66 84 0.8000 1.0000 2.0000 0.0000 Constraint 66 75 0.8000 1.0000 2.0000 0.0000 Constraint 58 692 0.8000 1.0000 2.0000 0.0000 Constraint 58 683 0.8000 1.0000 2.0000 0.0000 Constraint 58 671 0.8000 1.0000 2.0000 0.0000 Constraint 58 659 0.8000 1.0000 2.0000 0.0000 Constraint 58 650 0.8000 1.0000 2.0000 0.0000 Constraint 58 642 0.8000 1.0000 2.0000 0.0000 Constraint 58 633 0.8000 1.0000 2.0000 0.0000 Constraint 58 625 0.8000 1.0000 2.0000 0.0000 Constraint 58 543 0.8000 1.0000 2.0000 0.0000 Constraint 58 518 0.8000 1.0000 2.0000 0.0000 Constraint 58 509 0.8000 1.0000 2.0000 0.0000 Constraint 58 504 0.8000 1.0000 2.0000 0.0000 Constraint 58 497 0.8000 1.0000 2.0000 0.0000 Constraint 58 488 0.8000 1.0000 2.0000 0.0000 Constraint 58 481 0.8000 1.0000 2.0000 0.0000 Constraint 58 465 0.8000 1.0000 2.0000 0.0000 Constraint 58 456 0.8000 1.0000 2.0000 0.0000 Constraint 58 443 0.8000 1.0000 2.0000 0.0000 Constraint 58 435 0.8000 1.0000 2.0000 0.0000 Constraint 58 429 0.8000 1.0000 2.0000 0.0000 Constraint 58 418 0.8000 1.0000 2.0000 0.0000 Constraint 58 388 0.8000 1.0000 2.0000 0.0000 Constraint 58 363 0.8000 1.0000 2.0000 0.0000 Constraint 58 354 0.8000 1.0000 2.0000 0.0000 Constraint 58 349 0.8000 1.0000 2.0000 0.0000 Constraint 58 310 0.8000 1.0000 2.0000 0.0000 Constraint 58 283 0.8000 1.0000 2.0000 0.0000 Constraint 58 275 0.8000 1.0000 2.0000 0.0000 Constraint 58 264 0.8000 1.0000 2.0000 0.0000 Constraint 58 257 0.8000 1.0000 2.0000 0.0000 Constraint 58 248 0.8000 1.0000 2.0000 0.0000 Constraint 58 241 0.8000 1.0000 2.0000 0.0000 Constraint 58 194 0.8000 1.0000 2.0000 0.0000 Constraint 58 173 0.8000 1.0000 2.0000 0.0000 Constraint 58 168 0.8000 1.0000 2.0000 0.0000 Constraint 58 148 0.8000 1.0000 2.0000 0.0000 Constraint 58 122 0.8000 1.0000 2.0000 0.0000 Constraint 58 114 0.8000 1.0000 2.0000 0.0000 Constraint 58 106 0.8000 1.0000 2.0000 0.0000 Constraint 58 97 0.8000 1.0000 2.0000 0.0000 Constraint 58 92 0.8000 1.0000 2.0000 0.0000 Constraint 58 84 0.8000 1.0000 2.0000 0.0000 Constraint 58 75 0.8000 1.0000 2.0000 0.0000 Constraint 58 66 0.8000 1.0000 2.0000 0.0000 Constraint 51 692 0.8000 1.0000 2.0000 0.0000 Constraint 51 683 0.8000 1.0000 2.0000 0.0000 Constraint 51 671 0.8000 1.0000 2.0000 0.0000 Constraint 51 659 0.8000 1.0000 2.0000 0.0000 Constraint 51 650 0.8000 1.0000 2.0000 0.0000 Constraint 51 642 0.8000 1.0000 2.0000 0.0000 Constraint 51 633 0.8000 1.0000 2.0000 0.0000 Constraint 51 559 0.8000 1.0000 2.0000 0.0000 Constraint 51 543 0.8000 1.0000 2.0000 0.0000 Constraint 51 526 0.8000 1.0000 2.0000 0.0000 Constraint 51 518 0.8000 1.0000 2.0000 0.0000 Constraint 51 509 0.8000 1.0000 2.0000 0.0000 Constraint 51 504 0.8000 1.0000 2.0000 0.0000 Constraint 51 497 0.8000 1.0000 2.0000 0.0000 Constraint 51 488 0.8000 1.0000 2.0000 0.0000 Constraint 51 435 0.8000 1.0000 2.0000 0.0000 Constraint 51 429 0.8000 1.0000 2.0000 0.0000 Constraint 51 418 0.8000 1.0000 2.0000 0.0000 Constraint 51 399 0.8000 1.0000 2.0000 0.0000 Constraint 51 388 0.8000 1.0000 2.0000 0.0000 Constraint 51 380 0.8000 1.0000 2.0000 0.0000 Constraint 51 371 0.8000 1.0000 2.0000 0.0000 Constraint 51 354 0.8000 1.0000 2.0000 0.0000 Constraint 51 349 0.8000 1.0000 2.0000 0.0000 Constraint 51 310 0.8000 1.0000 2.0000 0.0000 Constraint 51 291 0.8000 1.0000 2.0000 0.0000 Constraint 51 283 0.8000 1.0000 2.0000 0.0000 Constraint 51 275 0.8000 1.0000 2.0000 0.0000 Constraint 51 264 0.8000 1.0000 2.0000 0.0000 Constraint 51 257 0.8000 1.0000 2.0000 0.0000 Constraint 51 248 0.8000 1.0000 2.0000 0.0000 Constraint 51 241 0.8000 1.0000 2.0000 0.0000 Constraint 51 221 0.8000 1.0000 2.0000 0.0000 Constraint 51 207 0.8000 1.0000 2.0000 0.0000 Constraint 51 200 0.8000 1.0000 2.0000 0.0000 Constraint 51 194 0.8000 1.0000 2.0000 0.0000 Constraint 51 182 0.8000 1.0000 2.0000 0.0000 Constraint 51 173 0.8000 1.0000 2.0000 0.0000 Constraint 51 168 0.8000 1.0000 2.0000 0.0000 Constraint 51 148 0.8000 1.0000 2.0000 0.0000 Constraint 51 142 0.8000 1.0000 2.0000 0.0000 Constraint 51 134 0.8000 1.0000 2.0000 0.0000 Constraint 51 114 0.8000 1.0000 2.0000 0.0000 Constraint 51 106 0.8000 1.0000 2.0000 0.0000 Constraint 51 97 0.8000 1.0000 2.0000 0.0000 Constraint 51 92 0.8000 1.0000 2.0000 0.0000 Constraint 51 84 0.8000 1.0000 2.0000 0.0000 Constraint 51 75 0.8000 1.0000 2.0000 0.0000 Constraint 51 66 0.8000 1.0000 2.0000 0.0000 Constraint 51 58 0.8000 1.0000 2.0000 0.0000 Constraint 44 692 0.8000 1.0000 2.0000 0.0000 Constraint 44 683 0.8000 1.0000 2.0000 0.0000 Constraint 44 671 0.8000 1.0000 2.0000 0.0000 Constraint 44 659 0.8000 1.0000 2.0000 0.0000 Constraint 44 650 0.8000 1.0000 2.0000 0.0000 Constraint 44 642 0.8000 1.0000 2.0000 0.0000 Constraint 44 559 0.8000 1.0000 2.0000 0.0000 Constraint 44 552 0.8000 1.0000 2.0000 0.0000 Constraint 44 543 0.8000 1.0000 2.0000 0.0000 Constraint 44 534 0.8000 1.0000 2.0000 0.0000 Constraint 44 526 0.8000 1.0000 2.0000 0.0000 Constraint 44 518 0.8000 1.0000 2.0000 0.0000 Constraint 44 509 0.8000 1.0000 2.0000 0.0000 Constraint 44 504 0.8000 1.0000 2.0000 0.0000 Constraint 44 497 0.8000 1.0000 2.0000 0.0000 Constraint 44 488 0.8000 1.0000 2.0000 0.0000 Constraint 44 481 0.8000 1.0000 2.0000 0.0000 Constraint 44 465 0.8000 1.0000 2.0000 0.0000 Constraint 44 443 0.8000 1.0000 2.0000 0.0000 Constraint 44 435 0.8000 1.0000 2.0000 0.0000 Constraint 44 429 0.8000 1.0000 2.0000 0.0000 Constraint 44 418 0.8000 1.0000 2.0000 0.0000 Constraint 44 406 0.8000 1.0000 2.0000 0.0000 Constraint 44 388 0.8000 1.0000 2.0000 0.0000 Constraint 44 380 0.8000 1.0000 2.0000 0.0000 Constraint 44 371 0.8000 1.0000 2.0000 0.0000 Constraint 44 354 0.8000 1.0000 2.0000 0.0000 Constraint 44 349 0.8000 1.0000 2.0000 0.0000 Constraint 44 310 0.8000 1.0000 2.0000 0.0000 Constraint 44 291 0.8000 1.0000 2.0000 0.0000 Constraint 44 283 0.8000 1.0000 2.0000 0.0000 Constraint 44 275 0.8000 1.0000 2.0000 0.0000 Constraint 44 264 0.8000 1.0000 2.0000 0.0000 Constraint 44 257 0.8000 1.0000 2.0000 0.0000 Constraint 44 248 0.8000 1.0000 2.0000 0.0000 Constraint 44 233 0.8000 1.0000 2.0000 0.0000 Constraint 44 207 0.8000 1.0000 2.0000 0.0000 Constraint 44 200 0.8000 1.0000 2.0000 0.0000 Constraint 44 194 0.8000 1.0000 2.0000 0.0000 Constraint 44 182 0.8000 1.0000 2.0000 0.0000 Constraint 44 173 0.8000 1.0000 2.0000 0.0000 Constraint 44 168 0.8000 1.0000 2.0000 0.0000 Constraint 44 148 0.8000 1.0000 2.0000 0.0000 Constraint 44 142 0.8000 1.0000 2.0000 0.0000 Constraint 44 134 0.8000 1.0000 2.0000 0.0000 Constraint 44 122 0.8000 1.0000 2.0000 0.0000 Constraint 44 114 0.8000 1.0000 2.0000 0.0000 Constraint 44 106 0.8000 1.0000 2.0000 0.0000 Constraint 44 97 0.8000 1.0000 2.0000 0.0000 Constraint 44 92 0.8000 1.0000 2.0000 0.0000 Constraint 44 84 0.8000 1.0000 2.0000 0.0000 Constraint 44 75 0.8000 1.0000 2.0000 0.0000 Constraint 44 66 0.8000 1.0000 2.0000 0.0000 Constraint 44 58 0.8000 1.0000 2.0000 0.0000 Constraint 44 51 0.8000 1.0000 2.0000 0.0000 Constraint 35 692 0.8000 1.0000 2.0000 0.0000 Constraint 35 683 0.8000 1.0000 2.0000 0.0000 Constraint 35 671 0.8000 1.0000 2.0000 0.0000 Constraint 35 659 0.8000 1.0000 2.0000 0.0000 Constraint 35 650 0.8000 1.0000 2.0000 0.0000 Constraint 35 559 0.8000 1.0000 2.0000 0.0000 Constraint 35 552 0.8000 1.0000 2.0000 0.0000 Constraint 35 543 0.8000 1.0000 2.0000 0.0000 Constraint 35 534 0.8000 1.0000 2.0000 0.0000 Constraint 35 526 0.8000 1.0000 2.0000 0.0000 Constraint 35 518 0.8000 1.0000 2.0000 0.0000 Constraint 35 509 0.8000 1.0000 2.0000 0.0000 Constraint 35 504 0.8000 1.0000 2.0000 0.0000 Constraint 35 497 0.8000 1.0000 2.0000 0.0000 Constraint 35 488 0.8000 1.0000 2.0000 0.0000 Constraint 35 481 0.8000 1.0000 2.0000 0.0000 Constraint 35 472 0.8000 1.0000 2.0000 0.0000 Constraint 35 465 0.8000 1.0000 2.0000 0.0000 Constraint 35 456 0.8000 1.0000 2.0000 0.0000 Constraint 35 443 0.8000 1.0000 2.0000 0.0000 Constraint 35 435 0.8000 1.0000 2.0000 0.0000 Constraint 35 429 0.8000 1.0000 2.0000 0.0000 Constraint 35 418 0.8000 1.0000 2.0000 0.0000 Constraint 35 406 0.8000 1.0000 2.0000 0.0000 Constraint 35 399 0.8000 1.0000 2.0000 0.0000 Constraint 35 380 0.8000 1.0000 2.0000 0.0000 Constraint 35 354 0.8000 1.0000 2.0000 0.0000 Constraint 35 315 0.8000 1.0000 2.0000 0.0000 Constraint 35 310 0.8000 1.0000 2.0000 0.0000 Constraint 35 305 0.8000 1.0000 2.0000 0.0000 Constraint 35 298 0.8000 1.0000 2.0000 0.0000 Constraint 35 291 0.8000 1.0000 2.0000 0.0000 Constraint 35 283 0.8000 1.0000 2.0000 0.0000 Constraint 35 275 0.8000 1.0000 2.0000 0.0000 Constraint 35 264 0.8000 1.0000 2.0000 0.0000 Constraint 35 257 0.8000 1.0000 2.0000 0.0000 Constraint 35 248 0.8000 1.0000 2.0000 0.0000 Constraint 35 241 0.8000 1.0000 2.0000 0.0000 Constraint 35 233 0.8000 1.0000 2.0000 0.0000 Constraint 35 221 0.8000 1.0000 2.0000 0.0000 Constraint 35 213 0.8000 1.0000 2.0000 0.0000 Constraint 35 207 0.8000 1.0000 2.0000 0.0000 Constraint 35 200 0.8000 1.0000 2.0000 0.0000 Constraint 35 194 0.8000 1.0000 2.0000 0.0000 Constraint 35 182 0.8000 1.0000 2.0000 0.0000 Constraint 35 173 0.8000 1.0000 2.0000 0.0000 Constraint 35 168 0.8000 1.0000 2.0000 0.0000 Constraint 35 148 0.8000 1.0000 2.0000 0.0000 Constraint 35 142 0.8000 1.0000 2.0000 0.0000 Constraint 35 134 0.8000 1.0000 2.0000 0.0000 Constraint 35 122 0.8000 1.0000 2.0000 0.0000 Constraint 35 114 0.8000 1.0000 2.0000 0.0000 Constraint 35 106 0.8000 1.0000 2.0000 0.0000 Constraint 35 97 0.8000 1.0000 2.0000 0.0000 Constraint 35 92 0.8000 1.0000 2.0000 0.0000 Constraint 35 84 0.8000 1.0000 2.0000 0.0000 Constraint 35 75 0.8000 1.0000 2.0000 0.0000 Constraint 35 66 0.8000 1.0000 2.0000 0.0000 Constraint 35 58 0.8000 1.0000 2.0000 0.0000 Constraint 35 51 0.8000 1.0000 2.0000 0.0000 Constraint 35 44 0.8000 1.0000 2.0000 0.0000 Constraint 24 683 0.8000 1.0000 2.0000 0.0000 Constraint 24 581 0.8000 1.0000 2.0000 0.0000 Constraint 24 572 0.8000 1.0000 2.0000 0.0000 Constraint 24 559 0.8000 1.0000 2.0000 0.0000 Constraint 24 552 0.8000 1.0000 2.0000 0.0000 Constraint 24 543 0.8000 1.0000 2.0000 0.0000 Constraint 24 534 0.8000 1.0000 2.0000 0.0000 Constraint 24 526 0.8000 1.0000 2.0000 0.0000 Constraint 24 518 0.8000 1.0000 2.0000 0.0000 Constraint 24 509 0.8000 1.0000 2.0000 0.0000 Constraint 24 504 0.8000 1.0000 2.0000 0.0000 Constraint 24 497 0.8000 1.0000 2.0000 0.0000 Constraint 24 488 0.8000 1.0000 2.0000 0.0000 Constraint 24 481 0.8000 1.0000 2.0000 0.0000 Constraint 24 472 0.8000 1.0000 2.0000 0.0000 Constraint 24 465 0.8000 1.0000 2.0000 0.0000 Constraint 24 456 0.8000 1.0000 2.0000 0.0000 Constraint 24 443 0.8000 1.0000 2.0000 0.0000 Constraint 24 435 0.8000 1.0000 2.0000 0.0000 Constraint 24 429 0.8000 1.0000 2.0000 0.0000 Constraint 24 418 0.8000 1.0000 2.0000 0.0000 Constraint 24 406 0.8000 1.0000 2.0000 0.0000 Constraint 24 399 0.8000 1.0000 2.0000 0.0000 Constraint 24 380 0.8000 1.0000 2.0000 0.0000 Constraint 24 354 0.8000 1.0000 2.0000 0.0000 Constraint 24 349 0.8000 1.0000 2.0000 0.0000 Constraint 24 342 0.8000 1.0000 2.0000 0.0000 Constraint 24 323 0.8000 1.0000 2.0000 0.0000 Constraint 24 315 0.8000 1.0000 2.0000 0.0000 Constraint 24 310 0.8000 1.0000 2.0000 0.0000 Constraint 24 305 0.8000 1.0000 2.0000 0.0000 Constraint 24 298 0.8000 1.0000 2.0000 0.0000 Constraint 24 291 0.8000 1.0000 2.0000 0.0000 Constraint 24 283 0.8000 1.0000 2.0000 0.0000 Constraint 24 275 0.8000 1.0000 2.0000 0.0000 Constraint 24 264 0.8000 1.0000 2.0000 0.0000 Constraint 24 257 0.8000 1.0000 2.0000 0.0000 Constraint 24 248 0.8000 1.0000 2.0000 0.0000 Constraint 24 241 0.8000 1.0000 2.0000 0.0000 Constraint 24 233 0.8000 1.0000 2.0000 0.0000 Constraint 24 221 0.8000 1.0000 2.0000 0.0000 Constraint 24 213 0.8000 1.0000 2.0000 0.0000 Constraint 24 207 0.8000 1.0000 2.0000 0.0000 Constraint 24 200 0.8000 1.0000 2.0000 0.0000 Constraint 24 194 0.8000 1.0000 2.0000 0.0000 Constraint 24 182 0.8000 1.0000 2.0000 0.0000 Constraint 24 173 0.8000 1.0000 2.0000 0.0000 Constraint 24 168 0.8000 1.0000 2.0000 0.0000 Constraint 24 148 0.8000 1.0000 2.0000 0.0000 Constraint 24 142 0.8000 1.0000 2.0000 0.0000 Constraint 24 134 0.8000 1.0000 2.0000 0.0000 Constraint 24 122 0.8000 1.0000 2.0000 0.0000 Constraint 24 114 0.8000 1.0000 2.0000 0.0000 Constraint 24 106 0.8000 1.0000 2.0000 0.0000 Constraint 24 97 0.8000 1.0000 2.0000 0.0000 Constraint 24 92 0.8000 1.0000 2.0000 0.0000 Constraint 24 84 0.8000 1.0000 2.0000 0.0000 Constraint 24 75 0.8000 1.0000 2.0000 0.0000 Constraint 24 66 0.8000 1.0000 2.0000 0.0000 Constraint 24 58 0.8000 1.0000 2.0000 0.0000 Constraint 24 51 0.8000 1.0000 2.0000 0.0000 Constraint 24 44 0.8000 1.0000 2.0000 0.0000 Constraint 24 35 0.8000 1.0000 2.0000 0.0000 Constraint 17 692 0.8000 1.0000 2.0000 0.0000 Constraint 17 595 0.8000 1.0000 2.0000 0.0000 Constraint 17 588 0.8000 1.0000 2.0000 0.0000 Constraint 17 581 0.8000 1.0000 2.0000 0.0000 Constraint 17 572 0.8000 1.0000 2.0000 0.0000 Constraint 17 559 0.8000 1.0000 2.0000 0.0000 Constraint 17 552 0.8000 1.0000 2.0000 0.0000 Constraint 17 543 0.8000 1.0000 2.0000 0.0000 Constraint 17 534 0.8000 1.0000 2.0000 0.0000 Constraint 17 526 0.8000 1.0000 2.0000 0.0000 Constraint 17 518 0.8000 1.0000 2.0000 0.0000 Constraint 17 509 0.8000 1.0000 2.0000 0.0000 Constraint 17 504 0.8000 1.0000 2.0000 0.0000 Constraint 17 497 0.8000 1.0000 2.0000 0.0000 Constraint 17 488 0.8000 1.0000 2.0000 0.0000 Constraint 17 481 0.8000 1.0000 2.0000 0.0000 Constraint 17 472 0.8000 1.0000 2.0000 0.0000 Constraint 17 465 0.8000 1.0000 2.0000 0.0000 Constraint 17 456 0.8000 1.0000 2.0000 0.0000 Constraint 17 443 0.8000 1.0000 2.0000 0.0000 Constraint 17 435 0.8000 1.0000 2.0000 0.0000 Constraint 17 429 0.8000 1.0000 2.0000 0.0000 Constraint 17 418 0.8000 1.0000 2.0000 0.0000 Constraint 17 406 0.8000 1.0000 2.0000 0.0000 Constraint 17 399 0.8000 1.0000 2.0000 0.0000 Constraint 17 380 0.8000 1.0000 2.0000 0.0000 Constraint 17 363 0.8000 1.0000 2.0000 0.0000 Constraint 17 354 0.8000 1.0000 2.0000 0.0000 Constraint 17 349 0.8000 1.0000 2.0000 0.0000 Constraint 17 342 0.8000 1.0000 2.0000 0.0000 Constraint 17 335 0.8000 1.0000 2.0000 0.0000 Constraint 17 323 0.8000 1.0000 2.0000 0.0000 Constraint 17 315 0.8000 1.0000 2.0000 0.0000 Constraint 17 310 0.8000 1.0000 2.0000 0.0000 Constraint 17 305 0.8000 1.0000 2.0000 0.0000 Constraint 17 298 0.8000 1.0000 2.0000 0.0000 Constraint 17 291 0.8000 1.0000 2.0000 0.0000 Constraint 17 283 0.8000 1.0000 2.0000 0.0000 Constraint 17 275 0.8000 1.0000 2.0000 0.0000 Constraint 17 264 0.8000 1.0000 2.0000 0.0000 Constraint 17 257 0.8000 1.0000 2.0000 0.0000 Constraint 17 248 0.8000 1.0000 2.0000 0.0000 Constraint 17 241 0.8000 1.0000 2.0000 0.0000 Constraint 17 233 0.8000 1.0000 2.0000 0.0000 Constraint 17 221 0.8000 1.0000 2.0000 0.0000 Constraint 17 213 0.8000 1.0000 2.0000 0.0000 Constraint 17 207 0.8000 1.0000 2.0000 0.0000 Constraint 17 200 0.8000 1.0000 2.0000 0.0000 Constraint 17 194 0.8000 1.0000 2.0000 0.0000 Constraint 17 182 0.8000 1.0000 2.0000 0.0000 Constraint 17 173 0.8000 1.0000 2.0000 0.0000 Constraint 17 168 0.8000 1.0000 2.0000 0.0000 Constraint 17 148 0.8000 1.0000 2.0000 0.0000 Constraint 17 142 0.8000 1.0000 2.0000 0.0000 Constraint 17 134 0.8000 1.0000 2.0000 0.0000 Constraint 17 122 0.8000 1.0000 2.0000 0.0000 Constraint 17 114 0.8000 1.0000 2.0000 0.0000 Constraint 17 106 0.8000 1.0000 2.0000 0.0000 Constraint 17 97 0.8000 1.0000 2.0000 0.0000 Constraint 17 92 0.8000 1.0000 2.0000 0.0000 Constraint 17 84 0.8000 1.0000 2.0000 0.0000 Constraint 17 75 0.8000 1.0000 2.0000 0.0000 Constraint 17 66 0.8000 1.0000 2.0000 0.0000 Constraint 17 58 0.8000 1.0000 2.0000 0.0000 Constraint 17 51 0.8000 1.0000 2.0000 0.0000 Constraint 17 44 0.8000 1.0000 2.0000 0.0000 Constraint 17 35 0.8000 1.0000 2.0000 0.0000 Constraint 17 24 0.8000 1.0000 2.0000 0.0000 Constraint 9 595 0.8000 1.0000 2.0000 0.0000 Constraint 9 588 0.8000 1.0000 2.0000 0.0000 Constraint 9 581 0.8000 1.0000 2.0000 0.0000 Constraint 9 572 0.8000 1.0000 2.0000 0.0000 Constraint 9 559 0.8000 1.0000 2.0000 0.0000 Constraint 9 552 0.8000 1.0000 2.0000 0.0000 Constraint 9 543 0.8000 1.0000 2.0000 0.0000 Constraint 9 534 0.8000 1.0000 2.0000 0.0000 Constraint 9 526 0.8000 1.0000 2.0000 0.0000 Constraint 9 518 0.8000 1.0000 2.0000 0.0000 Constraint 9 509 0.8000 1.0000 2.0000 0.0000 Constraint 9 504 0.8000 1.0000 2.0000 0.0000 Constraint 9 497 0.8000 1.0000 2.0000 0.0000 Constraint 9 488 0.8000 1.0000 2.0000 0.0000 Constraint 9 481 0.8000 1.0000 2.0000 0.0000 Constraint 9 472 0.8000 1.0000 2.0000 0.0000 Constraint 9 465 0.8000 1.0000 2.0000 0.0000 Constraint 9 456 0.8000 1.0000 2.0000 0.0000 Constraint 9 443 0.8000 1.0000 2.0000 0.0000 Constraint 9 435 0.8000 1.0000 2.0000 0.0000 Constraint 9 429 0.8000 1.0000 2.0000 0.0000 Constraint 9 418 0.8000 1.0000 2.0000 0.0000 Constraint 9 406 0.8000 1.0000 2.0000 0.0000 Constraint 9 399 0.8000 1.0000 2.0000 0.0000 Constraint 9 380 0.8000 1.0000 2.0000 0.0000 Constraint 9 363 0.8000 1.0000 2.0000 0.0000 Constraint 9 354 0.8000 1.0000 2.0000 0.0000 Constraint 9 349 0.8000 1.0000 2.0000 0.0000 Constraint 9 342 0.8000 1.0000 2.0000 0.0000 Constraint 9 323 0.8000 1.0000 2.0000 0.0000 Constraint 9 315 0.8000 1.0000 2.0000 0.0000 Constraint 9 310 0.8000 1.0000 2.0000 0.0000 Constraint 9 305 0.8000 1.0000 2.0000 0.0000 Constraint 9 298 0.8000 1.0000 2.0000 0.0000 Constraint 9 291 0.8000 1.0000 2.0000 0.0000 Constraint 9 283 0.8000 1.0000 2.0000 0.0000 Constraint 9 275 0.8000 1.0000 2.0000 0.0000 Constraint 9 264 0.8000 1.0000 2.0000 0.0000 Constraint 9 257 0.8000 1.0000 2.0000 0.0000 Constraint 9 248 0.8000 1.0000 2.0000 0.0000 Constraint 9 241 0.8000 1.0000 2.0000 0.0000 Constraint 9 233 0.8000 1.0000 2.0000 0.0000 Constraint 9 221 0.8000 1.0000 2.0000 0.0000 Constraint 9 213 0.8000 1.0000 2.0000 0.0000 Constraint 9 207 0.8000 1.0000 2.0000 0.0000 Constraint 9 200 0.8000 1.0000 2.0000 0.0000 Constraint 9 182 0.8000 1.0000 2.0000 0.0000 Constraint 9 173 0.8000 1.0000 2.0000 0.0000 Constraint 9 168 0.8000 1.0000 2.0000 0.0000 Constraint 9 148 0.8000 1.0000 2.0000 0.0000 Constraint 9 142 0.8000 1.0000 2.0000 0.0000 Constraint 9 134 0.8000 1.0000 2.0000 0.0000 Constraint 9 122 0.8000 1.0000 2.0000 0.0000 Constraint 9 114 0.8000 1.0000 2.0000 0.0000 Constraint 9 106 0.8000 1.0000 2.0000 0.0000 Constraint 9 97 0.8000 1.0000 2.0000 0.0000 Constraint 9 92 0.8000 1.0000 2.0000 0.0000 Constraint 9 84 0.8000 1.0000 2.0000 0.0000 Constraint 9 75 0.8000 1.0000 2.0000 0.0000 Constraint 9 66 0.8000 1.0000 2.0000 0.0000 Constraint 9 58 0.8000 1.0000 2.0000 0.0000 Constraint 9 51 0.8000 1.0000 2.0000 0.0000 Constraint 9 44 0.8000 1.0000 2.0000 0.0000 Constraint 9 35 0.8000 1.0000 2.0000 0.0000 Constraint 9 24 0.8000 1.0000 2.0000 0.0000 Constraint 9 17 0.8000 1.0000 2.0000 0.0000 Constraint 3 692 0.8000 1.0000 2.0000 0.0000 Constraint 3 603 0.8000 1.0000 2.0000 0.0000 Constraint 3 595 0.8000 1.0000 2.0000 0.0000 Constraint 3 588 0.8000 1.0000 2.0000 0.0000 Constraint 3 581 0.8000 1.0000 2.0000 0.0000 Constraint 3 572 0.8000 1.0000 2.0000 0.0000 Constraint 3 559 0.8000 1.0000 2.0000 0.0000 Constraint 3 552 0.8000 1.0000 2.0000 0.0000 Constraint 3 543 0.8000 1.0000 2.0000 0.0000 Constraint 3 534 0.8000 1.0000 2.0000 0.0000 Constraint 3 526 0.8000 1.0000 2.0000 0.0000 Constraint 3 518 0.8000 1.0000 2.0000 0.0000 Constraint 3 509 0.8000 1.0000 2.0000 0.0000 Constraint 3 504 0.8000 1.0000 2.0000 0.0000 Constraint 3 497 0.8000 1.0000 2.0000 0.0000 Constraint 3 488 0.8000 1.0000 2.0000 0.0000 Constraint 3 481 0.8000 1.0000 2.0000 0.0000 Constraint 3 472 0.8000 1.0000 2.0000 0.0000 Constraint 3 465 0.8000 1.0000 2.0000 0.0000 Constraint 3 456 0.8000 1.0000 2.0000 0.0000 Constraint 3 443 0.8000 1.0000 2.0000 0.0000 Constraint 3 435 0.8000 1.0000 2.0000 0.0000 Constraint 3 429 0.8000 1.0000 2.0000 0.0000 Constraint 3 418 0.8000 1.0000 2.0000 0.0000 Constraint 3 406 0.8000 1.0000 2.0000 0.0000 Constraint 3 399 0.8000 1.0000 2.0000 0.0000 Constraint 3 388 0.8000 1.0000 2.0000 0.0000 Constraint 3 380 0.8000 1.0000 2.0000 0.0000 Constraint 3 371 0.8000 1.0000 2.0000 0.0000 Constraint 3 363 0.8000 1.0000 2.0000 0.0000 Constraint 3 354 0.8000 1.0000 2.0000 0.0000 Constraint 3 349 0.8000 1.0000 2.0000 0.0000 Constraint 3 342 0.8000 1.0000 2.0000 0.0000 Constraint 3 335 0.8000 1.0000 2.0000 0.0000 Constraint 3 323 0.8000 1.0000 2.0000 0.0000 Constraint 3 315 0.8000 1.0000 2.0000 0.0000 Constraint 3 310 0.8000 1.0000 2.0000 0.0000 Constraint 3 305 0.8000 1.0000 2.0000 0.0000 Constraint 3 298 0.8000 1.0000 2.0000 0.0000 Constraint 3 291 0.8000 1.0000 2.0000 0.0000 Constraint 3 283 0.8000 1.0000 2.0000 0.0000 Constraint 3 275 0.8000 1.0000 2.0000 0.0000 Constraint 3 264 0.8000 1.0000 2.0000 0.0000 Constraint 3 257 0.8000 1.0000 2.0000 0.0000 Constraint 3 248 0.8000 1.0000 2.0000 0.0000 Constraint 3 241 0.8000 1.0000 2.0000 0.0000 Constraint 3 233 0.8000 1.0000 2.0000 0.0000 Constraint 3 221 0.8000 1.0000 2.0000 0.0000 Constraint 3 213 0.8000 1.0000 2.0000 0.0000 Constraint 3 207 0.8000 1.0000 2.0000 0.0000 Constraint 3 200 0.8000 1.0000 2.0000 0.0000 Constraint 3 194 0.8000 1.0000 2.0000 0.0000 Constraint 3 182 0.8000 1.0000 2.0000 0.0000 Constraint 3 173 0.8000 1.0000 2.0000 0.0000 Constraint 3 168 0.8000 1.0000 2.0000 0.0000 Constraint 3 148 0.8000 1.0000 2.0000 0.0000 Constraint 3 142 0.8000 1.0000 2.0000 0.0000 Constraint 3 134 0.8000 1.0000 2.0000 0.0000 Constraint 3 122 0.8000 1.0000 2.0000 0.0000 Constraint 3 114 0.8000 1.0000 2.0000 0.0000 Constraint 3 106 0.8000 1.0000 2.0000 0.0000 Constraint 3 97 0.8000 1.0000 2.0000 0.0000 Constraint 3 92 0.8000 1.0000 2.0000 0.0000 Constraint 3 84 0.8000 1.0000 2.0000 0.0000 Constraint 3 75 0.8000 1.0000 2.0000 0.0000 Constraint 3 66 0.8000 1.0000 2.0000 0.0000 Constraint 3 58 0.8000 1.0000 2.0000 0.0000 Constraint 3 51 0.8000 1.0000 2.0000 0.0000 Constraint 3 44 0.8000 1.0000 2.0000 0.0000 Constraint 3 35 0.8000 1.0000 2.0000 0.0000 Constraint 3 24 0.8000 1.0000 2.0000 0.0000 Constraint 3 17 0.8000 1.0000 2.0000 0.0000 Constraint 3 9 0.8000 1.0000 2.0000 0.0000 Done printing distance constraints # command: