# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/ # command:# reading dunbrack-2191.atoms # #computed average backbone with maximum peptide_sq_deviance = 0.002 # computed average trans backbone unit from 53157 examples # computed average trans backbone unit before proline from 2010 examples # computed average cis backbone unit from 97 examples # trans (non-proline) backbone unit: # CA= -2.2087 1.0126 -0.0030 # O= -0.1499 2.2440 0.0016 # C= -0.6889 1.1368 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4581 -0.0000 0.0000 # cis backbone unit: # CA= -0.1436 2.4534 -0.0002 # O= -2.0284 0.9742 0.0015 # C= -0.8018 1.0771 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4668 0.0000 0.0000 # trans backbone unit before proline: # CA= -2.2100 1.0631 -0.0014 # O= -0.1236 2.2458 0.0075 # C= -0.6872 1.1517 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4660 0.0000 0.0000 # After reading dunbrack-2191.atoms have 2191 chains in training database # Count of chains,residues,atoms: 2191,500310,3902258 # 493341 residues have no bad marker # 3226 residues lack atoms needed to compute omega # 1453 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 4 # HAS_OXT 1167 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 3052 # HAS_UNKNOWN_ATOMS 9 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 979 # NON_PLANAR_PEPTIDE 888 # BAD_PEPTIDE 2680 # Note: may sum to more than number of residues, # because one residue may have multiple problems # command:# Reading rotamer library from dunbrack-2191.rot # command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/ # command:# ReadAtomType exp-pdb.types Read AtomType exp-pdb with 49 types. # command:# ReadClashTable exp-pdb-2191-2symm.clash # Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2 # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0348/ # command:# Making conformation for sequence T0348 numbered 1 through 68 Created new target T0348 from T0348.a2m # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0348/ # command:# reading script from file T0348.t04.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1pft/T0348-1pft-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1pft expands to /projects/compbio/data/pdb/1pft.pdb.gz 1pft:Warning: there is no chain 1pft will retry with 1pftA # T0348 read from 1pft/T0348-1pft-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1pft read from 1pft/T0348-1pft-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1pft to template set # found chain 1pft in template set T0348 10 :VCPLCKG 1pft 7 :VCPACES # choosing archetypes in rotamer library T0348 17 :PLVFDKSKDELICKGDRLA 1pft 15 :ELIYDPERGEIVCAKCGYV T0348 38 :IK 1pft 34 :IE Number of specific fragments extracted= 3 number of extra gaps= 0 total=3 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_697517721.pdb -s /var/tmp/to_scwrl_697517721.seq -o /var/tmp/from_scwrl_697517721.pdb > /var/tmp/scwrl_697517721.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_697517721.pdb Number of alignments=1 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2ct7A/T0348-2ct7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2ct7A expands to /projects/compbio/data/pdb/2ct7.pdb.gz 2ct7A:# T0348 read from 2ct7A/T0348-2ct7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2ct7A read from 2ct7A/T0348-2ct7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2ct7A to template set # found chain 2ct7A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 27 :WCAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELAPEEEVKLEHHHHHH 2ct7A 58 :KRQWEEQHRGRSCEDFQNWKRMNSGP Number of specific fragments extracted= 2 number of extra gaps= 0 total=5 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_2001229903.pdb -s /var/tmp/to_scwrl_2001229903.seq -o /var/tmp/from_scwrl_2001229903.pdb > /var/tmp/scwrl_2001229903.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2001229903.pdb Number of alignments=2 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1dl6A/T0348-1dl6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1dl6A expands to /projects/compbio/data/pdb/1dl6.pdb.gz 1dl6A:# T0348 read from 1dl6A/T0348-1dl6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1dl6A read from 1dl6A/T0348-1dl6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1dl6A to template set # found chain 1dl6A in template set T0348 11 :CPLC 1dl6A 15 :CPNH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1dl6A 20 :DAILVEDYRAGDMICPECGLVVG Number of specific fragments extracted= 2 number of extra gaps= 0 total=7 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1950955938.pdb -s /var/tmp/to_scwrl_1950955938.seq -o /var/tmp/from_scwrl_1950955938.pdb > /var/tmp/scwrl_1950955938.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1950955938.pdb Number of alignments=3 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vk6A/T0348-1vk6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1vk6A expands to /projects/compbio/data/pdb/1vk6.pdb.gz 1vk6A:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 93, because occupancy 0.35 <= existing 0.650 in 1vk6A Skipped atom 95, because occupancy 0.350 <= existing 0.650 in 1vk6A Skipped atom 97, because occupancy 0.350 <= existing 0.650 in 1vk6A Skipped atom 99, because occupancy 0.350 <= existing 0.650 in 1vk6A Skipped atom 101, because occupancy 0.350 <= existing 0.650 in 1vk6A Skipped atom 103, because occupancy 0.350 <= existing 0.650 in 1vk6A Skipped atom 430, because occupancy 0.350 <= existing 0.650 in 1vk6A Skipped atom 432, because occupancy 0.350 <= existing 0.650 in 1vk6A Skipped atom 434, because occupancy 0.350 <= existing 0.650 in 1vk6A Skipped atom 436, because occupancy 0.350 <= existing 0.650 in 1vk6A Skipped atom 438, because occupancy 0.350 <= existing 0.650 in 1vk6A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 1634, because occupancy 0.350 <= existing 0.650 in 1vk6A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 1636, because occupancy 0.350 <= existing 0.650 in 1vk6A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 1638, because occupancy 0.350 <= existing 0.650 in 1vk6A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 1640, because occupancy 0.350 <= existing 0.650 in 1vk6A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 1669, because occupancy 0.350 <= existing 0.650 in 1vk6A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 1671, because occupancy 0.350 <= existing 0.650 in 1vk6A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 1673, because occupancy 0.350 <= existing 0.650 in 1vk6A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Skipped atom 1675, because occupancy 0.350 <= existing 0.650 in 1vk6A Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0348 read from 1vk6A/T0348-1vk6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vk6A read from 1vk6A/T0348-1vk6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1vk6A to template set # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERYY Number of specific fragments extracted= 1 number of extra gaps= 0 total=8 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1335939810.pdb -s /var/tmp/to_scwrl_1335939810.seq -o /var/tmp/from_scwrl_1335939810.pdb > /var/tmp/scwrl_1335939810.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1335939810.pdb Number of alignments=4 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1s72Z/T0348-1s72Z-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1s72Z expands to /projects/compbio/data/pdb/1s72.pdb.gz 1s72Z:# T0348 read from 1s72Z/T0348-1s72Z-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1s72Z read from 1s72Z/T0348-1s72Z-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1s72Z to template set # found chain 1s72Z in template set T0348 11 :CPLC 1s72Z 39 :CPNC T0348 15 :KGPLVFDKS 1s72Z 44 :EDRVDRQGT T0348 25 :DELICKGDRLAFPIKDGIP 1s72Z 53 :GIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKL 1s72Z 72 :ETPGGKTVR Number of specific fragments extracted= 4 number of extra gaps= 0 total=12 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1797073939.pdb -s /var/tmp/to_scwrl_1797073939.seq -o /var/tmp/from_scwrl_1797073939.pdb > /var/tmp/scwrl_1797073939.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1797073939.pdb Number of alignments=5 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vckA/T0348-1vckA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1vckA expands to /projects/compbio/data/pdb/1vck.pdb.gz 1vckA:# T0348 read from 1vckA/T0348-1vckA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vckA read from 1vckA/T0348-1vckA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1vckA to template set # found chain 1vckA in template set T0348 23 :SKDELICKGDRLAFPIKDGIPM 1vckA 59 :DGDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 1 number of extra gaps= 0 total=13 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1756915666.pdb -s /var/tmp/to_scwrl_1756915666.seq -o /var/tmp/from_scwrl_1756915666.pdb > /var/tmp/scwrl_1756915666.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1756915666.pdb Number of alignments=6 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vqoZ/T0348-1vqoZ-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1vqoZ expands to /projects/compbio/data/pdb/1vqo.pdb.gz 1vqoZ:# T0348 read from 1vqoZ/T0348-1vqoZ-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vqoZ read from 1vqoZ/T0348-1vqoZ-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1vqoZ to template set # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 10 :VCPLC 1vqoZ 38 :ACPNC T0348 15 :KGPLVFDKS 1vqoZ 44 :EDRVDRQGT T0348 25 :DELICKGDRLAFPIKDGIP 1vqoZ 53 :GIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKLE 1vqoZ 72 :ETPGGKTVRR Number of specific fragments extracted= 4 number of extra gaps= 0 total=17 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1065311705.pdb -s /var/tmp/to_scwrl_1065311705.seq -o /var/tmp/from_scwrl_1065311705.pdb > /var/tmp/scwrl_1065311705.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1065311705.pdb Number of alignments=7 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ypvA/T0348-1ypvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ypvA expands to /projects/compbio/data/pdb/1ypv.pdb.gz 1ypvA:# T0348 read from 1ypvA/T0348-1ypvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1ypvA read from 1ypvA/T0348-1ypvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1ypvA to template set # found chain 1ypvA in template set T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=18 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_719346228.pdb -s /var/tmp/to_scwrl_719346228.seq -o /var/tmp/from_scwrl_719346228.pdb > /var/tmp/scwrl_719346228.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_719346228.pdb Number of alignments=8 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1bc8C/T0348-1bc8C-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1bc8C expands to /projects/compbio/data/pdb/1bc8.pdb.gz 1bc8C:# T0348 read from 1bc8C/T0348-1bc8C-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1bc8C read from 1bc8C/T0348-1bc8C-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1bc8C to template set # found chain 1bc8C in template set T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKG 1bc8C 11 :LLQLLQKPQNKHMICWTSNDGQFKLLQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=19 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_846811127.pdb -s /var/tmp/to_scwrl_846811127.seq -o /var/tmp/from_scwrl_846811127.pdb > /var/tmp/scwrl_846811127.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_846811127.pdb Number of alignments=9 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1odhA/T0348-1odhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1odhA expands to /projects/compbio/data/pdb/1odh.pdb.gz 1odhA:# T0348 read from 1odhA/T0348-1odhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1odhA read from 1odhA/T0348-1odhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1odhA to template set # found chain 1odhA in template set T0348 10 :VCPLCKGPLVFDK 1odhA 112 :SCPNCNGPLKLIP T0348 24 :KDE 1odhA 129 :GGF T0348 27 :LICKGDRLAFP 1odhA 137 :WRHDGRFIFFQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=22 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1414829149.pdb -s /var/tmp/to_scwrl_1414829149.seq -o /var/tmp/from_scwrl_1414829149.pdb > /var/tmp/scwrl_1414829149.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1414829149.pdb Number of alignments=10 # command:# reading script from file T0348.t06.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 2ct7A/T0348-2ct7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 2ct7A/T0348-2ct7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2ct7A read from 2ct7A/T0348-2ct7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2ct7A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 27 :WCAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELAPEEEVKLEHHHHH 2ct7A 58 :KRQWEEQHRGRSCEDFQNWKRMNSG Number of specific fragments extracted= 2 number of extra gaps= 0 total=24 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1307565983.pdb -s /var/tmp/to_scwrl_1307565983.seq -o /var/tmp/from_scwrl_1307565983.pdb > /var/tmp/scwrl_1307565983.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1307565983.pdb Number of alignments=11 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vqoZ/T0348-1vqoZ-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vqoZ/T0348-1vqoZ-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vqoZ read from 1vqoZ/T0348-1vqoZ-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 10 :VCPLC 1vqoZ 38 :ACPNC T0348 15 :KGPLVFD 1vqoZ 44 :EDRVDRQ T0348 23 :SKDELICKGDRLAFPIKDGIP 1vqoZ 51 :GTGIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKLE 1vqoZ 72 :ETPGGKTVRR Number of specific fragments extracted= 4 number of extra gaps= 0 total=28 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_555996658.pdb -s /var/tmp/to_scwrl_555996658.seq -o /var/tmp/from_scwrl_555996658.pdb > /var/tmp/scwrl_555996658.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_555996658.pdb Number of alignments=12 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vk6A/T0348-1vk6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vk6A/T0348-1vk6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vk6A read from 1vk6A/T0348-1vk6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=29 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_324763920.pdb -s /var/tmp/to_scwrl_324763920.seq -o /var/tmp/from_scwrl_324763920.pdb > /var/tmp/scwrl_324763920.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_324763920.pdb Number of alignments=13 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1rlyA/T0348-1rlyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1rlyA expands to /projects/compbio/data/pdb/1rly.pdb.gz 1rlyA:# T0348 read from 1rlyA/T0348-1rlyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1rlyA read from 1rlyA/T0348-1rlyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1rlyA to template set # found chain 1rlyA in template set T0348 11 :CPLC 1rlyA 15 :CPNH T0348 15 :KGPLVFDKSKDELICKGDRLAF 1rlyA 20 :DAILVEDYRAGDMICPECGLVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=31 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_155789224.pdb -s /var/tmp/to_scwrl_155789224.seq -o /var/tmp/from_scwrl_155789224.pdb > /var/tmp/scwrl_155789224.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_155789224.pdb Number of alignments=14 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vckA/T0348-1vckA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vckA/T0348-1vckA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vckA read from 1vckA/T0348-1vckA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vckA in template set T0348 21 :DKSKDELICKGDRLAFPIKDGIPM 1vckA 57 :TLDGDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 1 number of extra gaps= 0 total=32 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_231602422.pdb -s /var/tmp/to_scwrl_231602422.seq -o /var/tmp/from_scwrl_231602422.pdb > /var/tmp/scwrl_231602422.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_231602422.pdb Number of alignments=15 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vd4A/T0348-1vd4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1vd4A expands to /projects/compbio/data/pdb/1vd4.pdb.gz 1vd4A:# T0348 read from 1vd4A/T0348-1vd4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vd4A read from 1vd4A/T0348-1vd4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1vd4A to template set # found chain 1vd4A in template set T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLA 1vd4A 145 :FDPMTGTFRCTFCHTE T0348 38 :IK 1vd4A 161 :VE Number of specific fragments extracted= 3 number of extra gaps= 0 total=35 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1389867268.pdb -s /var/tmp/to_scwrl_1389867268.seq -o /var/tmp/from_scwrl_1389867268.pdb > /var/tmp/scwrl_1389867268.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1389867268.pdb Number of alignments=16 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1odhA/T0348-1odhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1odhA/T0348-1odhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1odhA read from 1odhA/T0348-1odhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVFDK 1odhA 112 :SCPNCNGPLKLIP T0348 29 :CKG 1odhA 125 :CRG Number of specific fragments extracted= 2 number of extra gaps= 0 total=37 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_780821396.pdb -s /var/tmp/to_scwrl_780821396.seq -o /var/tmp/from_scwrl_780821396.pdb > /var/tmp/scwrl_780821396.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_780821396.pdb Number of alignments=17 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ee8A/T0348-1ee8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ee8A expands to /projects/compbio/data/pdb/1ee8.pdb.gz 1ee8A:# T0348 read from 1ee8A/T0348-1ee8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1ee8A read from 1ee8A/T0348-1ee8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1ee8A to template set # found chain 1ee8A in template set T0348 11 :CPLCKGPLVFDKSKD 1ee8A 238 :CPACGRPVERRVVAG T0348 26 :ELICKGD 1ee8A 255 :THFCPTC Number of specific fragments extracted= 2 number of extra gaps= 0 total=39 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_619054081.pdb -s /var/tmp/to_scwrl_619054081.seq -o /var/tmp/from_scwrl_619054081.pdb > /var/tmp/scwrl_619054081.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_619054081.pdb Number of alignments=18 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ur6B/T0348-1ur6B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ur6B expands to /projects/compbio/data/pdb/1ur6.pdb.gz 1ur6B:# T0348 read from 1ur6B/T0348-1ur6B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1ur6B read from 1ur6B/T0348-1ur6B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1ur6B to template set # found chain 1ur6B in template set T0348 2 :DAKFLEIL 1ur6B 38 :CRFCWHRI T0348 10 :VCPLCKGP 1ur6B 52 :LCPACRKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=41 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_711645630.pdb -s /var/tmp/to_scwrl_711645630.seq -o /var/tmp/from_scwrl_711645630.pdb > /var/tmp/scwrl_711645630.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_711645630.pdb Number of alignments=19 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1d0qA/T0348-1d0qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1d0qA/T0348-1d0qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1d0qA read from 1d0qA/T0348-1d0qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1d0qA in training set T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLA 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAG Number of specific fragments extracted= 2 number of extra gaps= 0 total=43 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_195740084.pdb -s /var/tmp/to_scwrl_195740084.seq -o /var/tmp/from_scwrl_195740084.pdb > /var/tmp/scwrl_195740084.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_195740084.pdb Number of alignments=20 # command:# reading script from file T0348.t2k.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1pft/T0348-1pft-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1pft/T0348-1pft-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1pft read from 1pft/T0348-1pft-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1pft in template set T0348 11 :CPLCKG 1pft 8 :CPACES T0348 17 :PLVFDKSKDELICKGDRLA 1pft 15 :ELIYDPERGEIVCAKCGYV T0348 38 :IKDGIP 1pft 34 :IEENII T0348 59 :VKLEHHHH 1pft 40 :DMGPEWRA Number of specific fragments extracted= 4 number of extra gaps= 0 total=47 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_917679292.pdb -s /var/tmp/to_scwrl_917679292.seq -o /var/tmp/from_scwrl_917679292.pdb > /var/tmp/scwrl_917679292.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_917679292.pdb Number of alignments=21 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1dl6A/T0348-1dl6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1dl6A/T0348-1dl6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1dl6A read from 1dl6A/T0348-1dl6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1dl6A in template set T0348 11 :CPLCK 1dl6A 15 :CPNHP T0348 16 :GPLVFDKSKDELICKGDRLAFP 1dl6A 21 :AILVEDYRAGDMICPECGLVVG Number of specific fragments extracted= 2 number of extra gaps= 0 total=49 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_2006811971.pdb -s /var/tmp/to_scwrl_2006811971.seq -o /var/tmp/from_scwrl_2006811971.pdb > /var/tmp/scwrl_2006811971.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2006811971.pdb Number of alignments=22 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vk6A/T0348-1vk6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vk6A/T0348-1vk6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vk6A read from 1vk6A/T0348-1vk6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFP 1vk6A 98 :CGYCGHEMYPSKTEWAMLCSHCRERYY Number of specific fragments extracted= 1 number of extra gaps= 0 total=50 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1253207671.pdb -s /var/tmp/to_scwrl_1253207671.seq -o /var/tmp/from_scwrl_1253207671.pdb > /var/tmp/scwrl_1253207671.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1253207671.pdb Number of alignments=23 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2ct7A/T0348-2ct7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 2ct7A/T0348-2ct7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2ct7A read from 2ct7A/T0348-2ct7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2ct7A in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 28 :CAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELA 2ct7A 58 :KRQWEEQHRGRS Number of specific fragments extracted= 2 number of extra gaps= 0 total=52 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_570073850.pdb -s /var/tmp/to_scwrl_570073850.seq -o /var/tmp/from_scwrl_570073850.pdb > /var/tmp/scwrl_570073850.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_570073850.pdb Number of alignments=24 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1s72Z/T0348-1s72Z-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1s72Z/T0348-1s72Z-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1s72Z read from 1s72Z/T0348-1s72Z-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1s72Z in template set T0348 11 :CPLCK 1s72Z 39 :CPNCG T0348 16 :GPLVFDKS 1s72Z 45 :DRVDRQGT T0348 25 :DELICKGDRLAFPIKD 1s72Z 53 :GIWQCSYCDYKFTGGS Number of specific fragments extracted= 3 number of extra gaps= 0 total=55 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1414647624.pdb -s /var/tmp/to_scwrl_1414647624.seq -o /var/tmp/from_scwrl_1414647624.pdb > /var/tmp/scwrl_1414647624.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1414647624.pdb Number of alignments=25 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vqoZ/T0348-1vqoZ-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vqoZ/T0348-1vqoZ-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vqoZ read from 1vqoZ/T0348-1vqoZ-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vqoZ in template set T0348 11 :CPLCKG 1vqoZ 39 :CPNCGE T0348 17 :PLVFDKS 1vqoZ 46 :RVDRQGT T0348 25 :DELICKGDRLAFPI 1vqoZ 53 :GIWQCSYCDYKFTG Number of specific fragments extracted= 3 number of extra gaps= 0 total=58 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1635905384.pdb -s /var/tmp/to_scwrl_1635905384.seq -o /var/tmp/from_scwrl_1635905384.pdb > /var/tmp/scwrl_1635905384.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1635905384.pdb Number of alignments=26 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vd4A/T0348-1vd4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vd4A/T0348-1vd4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vd4A read from 1vd4A/T0348-1vd4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLAF 1vd4A 145 :FDPMTGTFRCTFCHTEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=60 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1046741222.pdb -s /var/tmp/to_scwrl_1046741222.seq -o /var/tmp/from_scwrl_1046741222.pdb > /var/tmp/scwrl_1046741222.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1046741222.pdb Number of alignments=27 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1bc8C/T0348-1bc8C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1bc8C/T0348-1bc8C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1bc8C read from 1bc8C/T0348-1bc8C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1bc8C in template set T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKG 1bc8C 10 :FLLQLLQKPQNKHMICWTSNDGQFKLLQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=61 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_337739299.pdb -s /var/tmp/to_scwrl_337739299.seq -o /var/tmp/from_scwrl_337739299.pdb > /var/tmp/scwrl_337739299.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_337739299.pdb Number of alignments=28 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1odhA/T0348-1odhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1odhA/T0348-1odhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1odhA read from 1odhA/T0348-1odhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1odhA in template set T0348 11 :CPLCKGPLVFDK 1odhA 113 :CPNCNGPLKLIP T0348 40 :DGIP 1odhA 129 :GGFP Number of specific fragments extracted= 2 number of extra gaps= 0 total=63 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1896306639.pdb -s /var/tmp/to_scwrl_1896306639.seq -o /var/tmp/from_scwrl_1896306639.pdb > /var/tmp/scwrl_1896306639.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1896306639.pdb Number of alignments=29 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1far/T0348-1far-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1far expands to /projects/compbio/data/pdb/1far.pdb.gz 1far:Warning: there is no chain 1far will retry with 1farA # T0348 read from 1far/T0348-1far-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1far read from 1far/T0348-1far-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1far to template set # found chain 1far in template set T0348 11 :CPLCKGPLV 1far 152 :CDICQKFLL T0348 25 :DELICKGDRLAF 1far 161 :NGFRCQTCGYKF T0348 54 :APEEEVKLEHHHHHH 1far 173 :HEHCSTKVPTMCVDW Number of specific fragments extracted= 3 number of extra gaps= 0 total=66 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1343606041.pdb -s /var/tmp/to_scwrl_1343606041.seq -o /var/tmp/from_scwrl_1343606041.pdb > /var/tmp/scwrl_1343606041.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1343606041.pdb Number of alignments=30 # command:# reading script from file T0348.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 2ct7A/T0348-2ct7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 2ct7A/T0348-2ct7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2ct7A read from 2ct7A/T0348-2ct7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2ct7A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 27 :WCAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELAPEEEVKLEHHHHHH 2ct7A 58 :KRQWEEQHRGRSCEDFQNWKRMNSGP Number of specific fragments extracted= 2 number of extra gaps= 0 total=68 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1111783897.pdb -s /var/tmp/to_scwrl_1111783897.seq -o /var/tmp/from_scwrl_1111783897.pdb > /var/tmp/scwrl_1111783897.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1111783897.pdb Number of alignments=31 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1pft/T0348-1pft-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1pft/T0348-1pft-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1pft read from 1pft/T0348-1pft-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1pft in template set T0348 10 :VCPLCKG 1pft 7 :VCPACES T0348 17 :PLVFDKSKDELICKGDRLA 1pft 15 :ELIYDPERGEIVCAKCGYV T0348 38 :IKDGIPMM 1pft 34 :IEENIIDM Number of specific fragments extracted= 3 number of extra gaps= 0 total=71 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_446340713.pdb -s /var/tmp/to_scwrl_446340713.seq -o /var/tmp/from_scwrl_446340713.pdb > /var/tmp/scwrl_446340713.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_446340713.pdb Number of alignments=32 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vk6A/T0348-1vk6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vk6A/T0348-1vk6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vk6A read from 1vk6A/T0348-1vk6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERYY Number of specific fragments extracted= 1 number of extra gaps= 0 total=72 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1197352297.pdb -s /var/tmp/to_scwrl_1197352297.seq -o /var/tmp/from_scwrl_1197352297.pdb > /var/tmp/scwrl_1197352297.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1197352297.pdb Number of alignments=33 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vqoZ/T0348-1vqoZ-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vqoZ/T0348-1vqoZ-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vqoZ read from 1vqoZ/T0348-1vqoZ-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 10 :VCPLC 1vqoZ 38 :ACPNC T0348 15 :KGPLVFD 1vqoZ 44 :EDRVDRQ T0348 23 :SKDELICKGDRLAFPIKDGIP 1vqoZ 51 :GTGIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKLE 1vqoZ 72 :ETPGGKTVRR Number of specific fragments extracted= 4 number of extra gaps= 0 total=76 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_915256190.pdb -s /var/tmp/to_scwrl_915256190.seq -o /var/tmp/from_scwrl_915256190.pdb > /var/tmp/scwrl_915256190.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_915256190.pdb Number of alignments=34 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vckA/T0348-1vckA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vckA/T0348-1vckA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vckA read from 1vckA/T0348-1vckA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vckA in template set T0348 21 :DKSKDELICKGDRLAFPIKDGIPM 1vckA 57 :TLDGDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 1 number of extra gaps= 0 total=77 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1782280523.pdb -s /var/tmp/to_scwrl_1782280523.seq -o /var/tmp/from_scwrl_1782280523.pdb > /var/tmp/scwrl_1782280523.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1782280523.pdb Number of alignments=35 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1odhA/T0348-1odhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1odhA/T0348-1odhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1odhA read from 1odhA/T0348-1odhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVFDK 1odhA 112 :SCPNCNGPLKLIP T0348 29 :CKG 1odhA 125 :CRG Number of specific fragments extracted= 2 number of extra gaps= 0 total=79 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_846942590.pdb -s /var/tmp/to_scwrl_846942590.seq -o /var/tmp/from_scwrl_846942590.pdb > /var/tmp/scwrl_846942590.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_846942590.pdb Number of alignments=36 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vd4A/T0348-1vd4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vd4A/T0348-1vd4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1vd4A read from 1vd4A/T0348-1vd4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLAF 1vd4A 145 :FDPMTGTFRCTFCHTEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=81 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_524688209.pdb -s /var/tmp/to_scwrl_524688209.seq -o /var/tmp/from_scwrl_524688209.pdb > /var/tmp/scwrl_524688209.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_524688209.pdb Number of alignments=37 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1s72Z/T0348-1s72Z-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1s72Z/T0348-1s72Z-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1s72Z read from 1s72Z/T0348-1s72Z-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1s72Z in template set T0348 10 :VCPLC 1s72Z 38 :ACPNC T0348 15 :KGPLVFD 1s72Z 44 :EDRVDRQ T0348 23 :SKDELICKGDRLAFPIKDGIP 1s72Z 51 :GTGIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKL 1s72Z 72 :ETPGGKTVR Number of specific fragments extracted= 4 number of extra gaps= 0 total=85 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_700108581.pdb -s /var/tmp/to_scwrl_700108581.seq -o /var/tmp/from_scwrl_700108581.pdb > /var/tmp/scwrl_700108581.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_700108581.pdb Number of alignments=38 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ee8A/T0348-1ee8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1ee8A/T0348-1ee8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1ee8A read from 1ee8A/T0348-1ee8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1ee8A in template set T0348 11 :CPLCKGPLVFDKSKD 1ee8A 238 :CPACGRPVERRVVAG T0348 26 :ELICKGD 1ee8A 255 :THFCPTC Number of specific fragments extracted= 2 number of extra gaps= 0 total=87 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1566288818.pdb -s /var/tmp/to_scwrl_1566288818.seq -o /var/tmp/from_scwrl_1566288818.pdb > /var/tmp/scwrl_1566288818.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1566288818.pdb Number of alignments=39 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ypvA/T0348-1ypvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1ypvA/T0348-1ypvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1ypvA read from 1ypvA/T0348-1ypvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1ypvA in template set T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=88 # request to SCWRL produces command: ulimit -t 62 ; scwrl3 -i /var/tmp/to_scwrl_1371499335.pdb -s /var/tmp/to_scwrl_1371499335.seq -o /var/tmp/from_scwrl_1371499335.pdb > /var/tmp/scwrl_1371499335.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1371499335.pdb Number of alignments=40 # command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0348//projects/compbio/experiments/protein-predict/casp7/constraints/T0348/manyalignments.under or /projects/compbio/experiments/protein-predict/casp7/T0348//projects/compbio/experiments/protein-predict/casp7/constraints/T0348/manyalignments.under.gz for input Trying /projects/compbio/experiments/protein-predict/casp7/constraints/T0348/manyalignments.under # reading script from file /projects/compbio/experiments/protein-predict/casp7/constraints/T0348/manyalignments.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1yk4A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1yk4A expands to /projects/compbio/data/pdb/1yk4.pdb.gz 1yk4A:Skipped atom 15, because occupancy 0.220 <= existing 0.780 in 1yk4A Skipped atom 19, because occupancy 0.220 <= existing 0.780 in 1yk4A Skipped atom 21, because occupancy 0.220 <= existing 0.780 in 1yk4A Skipped atom 23, because occupancy 0.220 <= existing 0.780 in 1yk4A Skipped atom 25, because occupancy 0.220 <= existing 0.780 in 1yk4A Skipped atom 27, because occupancy 0.220 <= existing 0.780 in 1yk4A Skipped atom 77, because occupancy 0.130 <= existing 0.610 in 1yk4A Skipped atom 78, because occupancy 0.260 <= existing 0.610 in 1yk4A Skipped atom 80, because occupancy 0.130 <= existing 0.610 in 1yk4A Skipped atom 81, because occupancy 0.260 <= existing 0.610 in 1yk4A Skipped atom 106, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 108, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 128, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 130, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 132, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 134, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 136, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 138, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 140, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 142, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 166, because occupancy 0.380 <= existing 0.620 in 1yk4A Skipped atom 323, because occupancy 0.220 <= existing 0.780 in 1yk4A Skipped atom 325, because occupancy 0.220 <= existing 0.780 in 1yk4A Skipped atom 327, because occupancy 0.220 <= existing 0.780 in 1yk4A Skipped atom 398, because occupancy 0.360 <= existing 0.590 in 1yk4A Skipped atom 399, because occupancy 0.060 <= existing 0.590 in 1yk4A Skipped atom 401, because occupancy 0.360 <= existing 0.590 in 1yk4A Skipped atom 402, because occupancy 0.060 <= existing 0.590 in 1yk4A Skipped atom 565, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 567, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 569, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 571, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 573, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 575, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 577, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 579, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 589, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 591, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 593, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 595, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 597, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 599, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 601, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 603, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 613, because occupancy 0.490 <= existing 0.510 in 1yk4A Skipped atom 666, because occupancy 0.340 <= existing 0.660 in 1yk4A Skipped atom 670, because occupancy 0.340 <= existing 0.660 in 1yk4A Skipped atom 672, because occupancy 0.340 <= existing 0.660 in 1yk4A Skipped atom 674, because occupancy 0.340 <= existing 0.660 in 1yk4A Skipped atom 822, because occupancy 0.390 <= existing 0.610 in 1yk4A Skipped atom 824, because occupancy 0.390 <= existing 0.610 in 1yk4A Skipped atom 826, because occupancy 0.390 <= existing 0.610 in 1yk4A Skipped atom 828, because occupancy 0.390 <= existing 0.610 in 1yk4A Skipped atom 830, because occupancy 0.390 <= existing 0.610 in 1yk4A Skipped atom 843, because occupancy 0.260 <= existing 0.740 in 1yk4A Skipped atom 847, because occupancy 0.260 <= existing 0.740 in 1yk4A Skipped atom 849, because occupancy 0.260 <= existing 0.740 in 1yk4A Skipped atom 851, because occupancy 0.260 <= existing 0.740 in 1yk4A Skipped atom 853, because occupancy 0.260 <= existing 0.740 in 1yk4A Skipped atom 855, because occupancy 0.260 <= existing 0.740 in 1yk4A Skipped atom 857, because occupancy 0.260 <= existing 0.740 in 1yk4A Skipped atom 859, because occupancy 0.260 <= existing 0.740 in 1yk4A # T0348 read from 1yk4A/merged-a2m # 1yk4A read from 1yk4A/merged-a2m # adding 1yk4A to template set # found chain 1yk4A in template set Warning: unaligning (T0348)E7 because first residue in template chain is (1yk4A)A2 T0348 8 :ILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGI 1yk4A 3 :KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDW T0348 53 :LAPEEEVKLEHHHHHH 1yk4A 38 :VCPLCGAPKSEFERIE Number of specific fragments extracted= 2 number of extra gaps= 0 total=90 Number of alignments=41 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)E7 because first residue in template chain is (1yk4A)A2 T0348 8 :ILVCPLCK 1yk4A 3 :KLSCKICG T0348 18 :LVFDKSK 1yk4A 11 :YIYDEDE T0348 31 :GD 1yk4A 18 :GD T0348 34 :LAFPIKDGIPMM 1yk4A 20 :PDNGISPGTKFE T0348 47 :ESEARELAPEEEVKLEHHHHHH 1yk4A 32 :DLPDDWVCPLCGAPKSEFERIE Number of specific fragments extracted= 5 number of extra gaps= 0 total=95 Number of alignments=42 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 10 :VCPLCK 1yk4A 38 :VCPLCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=96 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 9 :LVCPLCKGP 1yk4A 37 :WVCPLCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=97 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)E7 because first residue in template chain is (1yk4A)A2 T0348 8 :ILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGI 1yk4A 3 :KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDW T0348 53 :LAPEEEVKLEHHHHHH 1yk4A 38 :VCPLCGAPKSEFERIE Number of specific fragments extracted= 2 number of extra gaps= 0 total=99 Number of alignments=43 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)E7 because first residue in template chain is (1yk4A)A2 T0348 8 :ILVCPLCK 1yk4A 3 :KLSCKICG T0348 18 :LVFDKSK 1yk4A 11 :YIYDEDE T0348 31 :GDR 1yk4A 18 :GDP T0348 35 :AFPIKDGIPMM 1yk4A 21 :DNGISPGTKFE T0348 47 :ESEARELAPEEEVKLEHHHHHH 1yk4A 32 :DLPDDWVCPLCGAPKSEFERIE Number of specific fragments extracted= 5 number of extra gaps= 0 total=104 Number of alignments=44 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 10 :VCPLCK 1yk4A 38 :VCPLCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=105 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 9 :LVCPLCKGP 1yk4A 37 :WVCPLCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=106 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 1 :MD 1yk4A 2 :AK T0348 9 :LVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGI 1yk4A 4 :LSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDW T0348 53 :LAPEEEVKLEHHHHHH 1yk4A 38 :VCPLCGAPKSEFERIE Number of specific fragments extracted= 3 number of extra gaps= 0 total=109 Number of alignments=45 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 1 :M 1yk4A 2 :A T0348 8 :ILVCPLCK 1yk4A 3 :KLSCKICG T0348 18 :LVFDKSKDEL 1yk4A 11 :YIYDEDEGDP T0348 35 :AFPIKDGIPMM 1yk4A 21 :DNGISPGTKFE T0348 47 :ESEARELAPEEEVKLEHHHHHH 1yk4A 32 :DLPDDWVCPLCGAPKSEFERIE Number of specific fragments extracted= 5 number of extra gaps= 0 total=114 Number of alignments=46 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 10 :VCPLCKGP 1yk4A 38 :VCPLCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=115 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 9 :LVCPLCKG 1yk4A 37 :WVCPLCGA Number of specific fragments extracted= 1 number of extra gaps= 0 total=116 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 9 :LVCPLCKGP 1yk4A 37 :WVCPLCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=117 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 9 :LVCPLCKGP 1yk4A 37 :WVCPLCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=118 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)D25 because first residue in template chain is (1yk4A)A2 T0348 26 :ELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 1yk4A 3 :KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGA Number of specific fragments extracted= 1 number of extra gaps= 0 total=119 Number of alignments=47 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 27 :LICKGDRLAFPIKDGIPMMLESEARELAP 1yk4A 4 :LSCKICGYIYDEDEGDPDNGISPGTKFED T0348 56 :EEEVKLEHHHHH 1yk4A 35 :DDWVCPLCGAPK Number of specific fragments extracted= 2 number of extra gaps= 0 total=121 Number of alignments=48 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)D25 because first residue in template chain is (1yk4A)A2 T0348 26 :ELICKGDRLAFPIKDG 1yk4A 3 :KLSCKICGYIYDEDEG T0348 48 :SEARELAPEEEVKLEHHHHH 1yk4A 19 :DPDNGISPGTKFEDLPDDWV Number of specific fragments extracted= 2 number of extra gaps= 0 total=123 Number of alignments=49 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)D25 because first residue in template chain is (1yk4A)A2 T0348 26 :ELICKGDRLAFPIKDG 1yk4A 3 :KLSCKICGYIYDEDEG T0348 46 :LESE 1yk4A 19 :DPDN T0348 50 :ARELAPEEEVKLEHHHHH 1yk4A 30 :FEDLPDDWVCPLCGAPKS Number of specific fragments extracted= 3 number of extra gaps= 0 total=126 Number of alignments=50 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 3 :AKFLEILVCPLCKGP 1yk4A 31 :EDLPDDWVCPLCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=127 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 4 :KFLEILVCPLCKG 1yk4A 32 :DLPDDWVCPLCGA Number of specific fragments extracted= 1 number of extra gaps= 0 total=128 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 26 :ELICKGDRLAFPIKDG 1yk4A 3 :KLSCKICGYIYDEDEG T0348 48 :SEARELAPEEEVKLEHHH 1yk4A 19 :DPDNGISPGTKFEDLPDD Number of specific fragments extracted= 2 number of extra gaps= 0 total=130 Number of alignments=51 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 26 :ELICKGDRLAFPIKDG 1yk4A 3 :KLSCKICGYIYDEDEG T0348 46 :LESE 1yk4A 19 :DPDN T0348 52 :ELAPEE 1yk4A 23 :GISPGT Number of specific fragments extracted= 3 number of extra gaps= 0 total=133 Number of alignments=52 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)D25 because first residue in template chain is (1yk4A)A2 T0348 26 :ELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 1yk4A 3 :KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGA Number of specific fragments extracted= 1 number of extra gaps= 0 total=134 Number of alignments=53 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 26 :ELICKGDRLAFPIKDGIPMMLESEARELAP 1yk4A 3 :KLSCKICGYIYDEDEGDPDNGISPGTKFED T0348 56 :EEEVKLEHHHHH 1yk4A 35 :DDWVCPLCGAPK Number of specific fragments extracted= 2 number of extra gaps= 0 total=136 Number of alignments=54 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)D25 because first residue in template chain is (1yk4A)A2 T0348 26 :ELICKGDRLAFPIKDGIPM 1yk4A 3 :KLSCKICGYIYDEDEGDPD T0348 51 :RELAPEEEVKLEHHHHH 1yk4A 22 :NGISPGTKFEDLPDDWV Number of specific fragments extracted= 2 number of extra gaps= 0 total=138 Number of alignments=55 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)D25 because first residue in template chain is (1yk4A)A2 T0348 26 :ELICKGDRLAFPIKDGIPM 1yk4A 3 :KLSCKICGYIYDEDEGDPD T0348 45 :MLES 1yk4A 24 :ISPG T0348 50 :ARELAPEEEVKLEHHHHH 1yk4A 30 :FEDLPDDWVCPLCGAPKS Number of specific fragments extracted= 3 number of extra gaps= 0 total=141 Number of alignments=56 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 3 :AKFLEILVCPLCKGP 1yk4A 31 :EDLPDDWVCPLCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=142 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 4 :KFLEILVCPLCKG 1yk4A 32 :DLPDDWVCPLCGA Number of specific fragments extracted= 1 number of extra gaps= 0 total=143 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 26 :ELICKGDRLAFPIKDGIP 1yk4A 3 :KLSCKICGYIYDEDEGDP T0348 50 :ARELAPEEEVKLEHHH 1yk4A 21 :DNGISPGTKFEDLPDD Number of specific fragments extracted= 2 number of extra gaps= 0 total=145 Number of alignments=57 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 26 :ELICKGDRLAFPIKDGIP 1yk4A 3 :KLSCKICGYIYDEDEGDP T0348 48 :S 1yk4A 21 :D T0348 51 :RELAPEEE 1yk4A 22 :NGISPGTK Number of specific fragments extracted= 3 number of extra gaps= 0 total=148 Number of alignments=58 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)D25 because first residue in template chain is (1yk4A)A2 T0348 26 :ELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1yk4A 3 :KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=149 Number of alignments=59 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)E7 because first residue in template chain is (1yk4A)A2 T0348 8 :ILVCPLC 1yk4A 3 :KLSCKIC T0348 33 :RLAFPIKDGIPMMLESEARELAPEEE 1yk4A 10 :GYIYDEDEGDPDNGISPGTKFEDLPD T0348 59 :VKLEHHHHHH 1yk4A 44 :APKSEFERIE Number of specific fragments extracted= 3 number of extra gaps= 0 total=152 Number of alignments=60 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)D25 because first residue in template chain is (1yk4A)A2 T0348 26 :ELICKGDRLAFPIKDGIPM 1yk4A 3 :KLSCKICGYIYDEDEGDPD T0348 48 :SEARELAPEEEVKL 1yk4A 22 :NGISPGTKFEDLPD T0348 62 :EHHHHHH 1yk4A 47 :SEFERIE Number of specific fragments extracted= 3 number of extra gaps= 0 total=155 Number of alignments=61 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)D25 because first residue in template chain is (1yk4A)A2 T0348 26 :ELICKGDRLAFPIKDGIP 1yk4A 3 :KLSCKICGYIYDEDEGDP T0348 48 :SE 1yk4A 21 :DN T0348 52 :ELAPE 1yk4A 23 :GISPG T0348 57 :E 1yk4A 32 :D T0348 58 :EVKLEHHHHHH 1yk4A 43 :GAPKSEFERIE Number of specific fragments extracted= 5 number of extra gaps= 0 total=160 Number of alignments=62 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 3 :AKFLEILVCPLCKGP 1yk4A 31 :EDLPDDWVCPLCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=161 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 4 :KFLEILVCPLCKGP 1yk4A 32 :DLPDDWVCPLCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=162 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set T0348 26 :ELICKGDRLAFPIKDGIPM 1yk4A 3 :KLSCKICGYIYDEDEGDPD T0348 57 :EEVKLEHHHH 1yk4A 22 :NGISPGTKFE Number of specific fragments extracted= 2 number of extra gaps= 0 total=164 Number of alignments=63 # 1yk4A read from 1yk4A/merged-a2m # found chain 1yk4A in template set Warning: unaligning (T0348)D25 because first residue in template chain is (1yk4A)A2 T0348 26 :ELICKGDRLAFPIKDGIP 1yk4A 3 :KLSCKICGYIYDEDEGDP T0348 56 :EEEVKLEHHH 1yk4A 21 :DNGISPGTKF Number of specific fragments extracted= 2 number of extra gaps= 0 total=166 Number of alignments=64 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ptq/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ptq expands to /projects/compbio/data/pdb/1ptq.pdb.gz 1ptq:Warning: there is no chain 1ptq will retry with 1ptqA # T0348 read from 1ptq/merged-a2m # 1ptq read from 1ptq/merged-a2m # adding 1ptq to template set # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 Warning: unaligning (T0348)L46 because last residue in template chain is (1ptq)C280 T0348 1 :MD 1ptq 231 :HR T0348 3 :AKFLE 1ptq 236 :YNYMS T0348 10 :VCPLC 1ptq 243 :FCDHC T0348 16 :GPLVFDKSKDELICKGDRLAFP 1ptq 248 :GSLLWGLVKQGLKCEDCGMNVH T0348 38 :IKDGIPMM 1ptq 272 :CREKVANL Number of specific fragments extracted= 5 number of extra gaps= 1 total=171 Number of alignments=65 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 T0348 4 :KFLE 1ptq 237 :NYMS T0348 10 :VCPLC 1ptq 243 :FCDHC T0348 16 :GPLVFDKSKDELICKGD 1ptq 248 :GSLLWGLVKQGLKCEDC Number of specific fragments extracted= 3 number of extra gaps= 1 total=174 Number of alignments=66 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 Warning: unaligning (T0348)S48 because last residue in template chain is (1ptq)C280 T0348 1 :MDAKFLE 1ptq 234 :KVYNYMS T0348 10 :VCPLCKGPLVFD 1ptq 243 :FCDHCGSLLWGL T0348 23 :SKDELICKGDRLAFPIKDGIPMMLE 1ptq 255 :VKQGLKCEDCGMNVHHKCREKVANL Number of specific fragments extracted= 3 number of extra gaps= 1 total=177 Number of alignments=67 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 Warning: unaligning (T0348)S48 because last residue in template chain is (1ptq)C280 T0348 3 :AKFLE 1ptq 236 :YNYMS T0348 10 :VCPLCKGPLVFD 1ptq 243 :FCDHCGSLLWGL T0348 23 :SKDELICKGDRLAFPIKDGIPMMLE 1ptq 255 :VKQGLKCEDCGMNVHHKCREKVANL Number of specific fragments extracted= 3 number of extra gaps= 1 total=180 Number of alignments=68 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 T0348 5 :FLE 1ptq 238 :YMS T0348 10 :VCPLCKGPLV 1ptq 243 :FCDHCGSLLW Number of specific fragments extracted= 2 number of extra gaps= 1 total=182 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 T0348 5 :FLE 1ptq 238 :YMS T0348 10 :VCPLCKGPLVFD 1ptq 243 :FCDHCGSLLWGL T0348 23 :SKDELICK 1ptq 255 :VKQGLKCE Number of specific fragments extracted= 3 number of extra gaps= 1 total=185 Number of alignments=69 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 Warning: unaligning (T0348)S48 because last residue in template chain is (1ptq)C280 T0348 1 :MDAKFLE 1ptq 234 :KVYNYMS T0348 10 :VCPLCKGPL 1ptq 243 :FCDHCGSLL T0348 20 :FDKSKDELICKGDRLAFPIKDGIPMMLE 1ptq 252 :WGLVKQGLKCEDCGMNVHHKCREKVANL Number of specific fragments extracted= 3 number of extra gaps= 1 total=188 Number of alignments=70 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 T0348 3 :AKFLE 1ptq 236 :YNYMS T0348 10 :VCPLCKGPL 1ptq 243 :FCDHCGSLL T0348 20 :FDKSKDELICKGDRLAFPIKDGIPMML 1ptq 252 :WGLVKQGLKCEDCGMNVHHKCREKVAN Number of specific fragments extracted= 3 number of extra gaps= 1 total=191 Number of alignments=71 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 T0348 5 :FLE 1ptq 238 :YMS T0348 10 :VCPLCKGPLV 1ptq 243 :FCDHCGSLLW Number of specific fragments extracted= 2 number of extra gaps= 1 total=193 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 T0348 5 :FLE 1ptq 238 :YMS T0348 10 :VCPLCKGPLV 1ptq 243 :FCDHCGSLLW T0348 21 :DKSKDELIC 1ptq 253 :GLVKQGLKC Number of specific fragments extracted= 3 number of extra gaps= 1 total=196 Number of alignments=72 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 Warning: unaligning (T0348)S48 because last residue in template chain is (1ptq)C280 T0348 1 :MDAKFLE 1ptq 234 :KVYNYMS T0348 10 :VCPLCKGPLVFDK 1ptq 243 :FCDHCGSLLWGLV T0348 24 :KDELICKGDRLAFPIKDGIPMMLE 1ptq 256 :KQGLKCEDCGMNVHHKCREKVANL Number of specific fragments extracted= 3 number of extra gaps= 1 total=199 Number of alignments=73 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 T0348 1 :M 1ptq 231 :H T0348 2 :DAKFLE 1ptq 235 :VYNYMS T0348 10 :VCPLCKGPLVF 1ptq 243 :FCDHCGSLLWG T0348 22 :KSKDELICKGDRLAFPIK 1ptq 254 :LVKQGLKCEDCGMNVHHK Number of specific fragments extracted= 4 number of extra gaps= 1 total=203 Number of alignments=74 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 T0348 5 :FLE 1ptq 238 :YMS T0348 10 :VCPLCKGPLV 1ptq 243 :FCDHCGSLLW Number of specific fragments extracted= 2 number of extra gaps= 1 total=205 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)I8 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)L9 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 T0348 4 :KFLE 1ptq 237 :NYMS T0348 10 :VCPLCKGPLVFDK 1ptq 243 :FCDHCGSLLWGLV T0348 24 :KDELIC 1ptq 256 :KQGLKC Number of specific fragments extracted= 3 number of extra gaps= 1 total=208 Number of alignments=75 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 16 :GPLVFDKSKDELICK 1ptq 248 :GSLLWGLVKQGLKCE Number of specific fragments extracted= 1 number of extra gaps= 0 total=209 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 10 :VCPLC 1ptq 243 :FCDHC T0348 16 :GPLVFDKSKDELICKG 1ptq 248 :GSLLWGLVKQGLKCED Number of specific fragments extracted= 2 number of extra gaps= 0 total=211 Number of alignments=76 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)C11 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 Warning: unaligning (T0348)L46 because last residue in template chain is (1ptq)C280 T0348 1 :MDAKFLEILV 1ptq 231 :HRFKVYNYMS T0348 13 :LC 1ptq 243 :FC T0348 15 :KGPLVFDKSKDELICKGDR 1ptq 247 :CGSLLWGLVKQGLKCEDCG T0348 34 :LAFPIKDGIPMM 1ptq 268 :VHHKCREKVANL Number of specific fragments extracted= 4 number of extra gaps= 1 total=215 Number of alignments=77 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)L46 because last residue in template chain is (1ptq)C280 T0348 1 :MDAKFLEIL 1ptq 231 :HRFKVYNYM T0348 10 :VCPLCK 1ptq 243 :FCDHCG T0348 17 :PLVFDKSKDELICKGDR 1ptq 249 :SLLWGLVKQGLKCEDCG T0348 34 :LAFPIKDGIPMM 1ptq 268 :VHHKCREKVANL Number of specific fragments extracted= 4 number of extra gaps= 0 total=219 Number of alignments=78 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 1 :MD 1ptq 231 :HR T0348 10 :VCPLCKG 1ptq 243 :FCDHCGS T0348 18 :LVFDKSKDELICKGDRLAFP 1ptq 250 :LLWGLVKQGLKCEDCGMNVH T0348 58 :EVKLEHHHHHH 1ptq 270 :HKCREKVANLC Number of specific fragments extracted= 4 number of extra gaps= 0 total=223 Number of alignments=79 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 1 :MD 1ptq 231 :HR T0348 10 :VCPLCKGPLV 1ptq 243 :FCDHCGSLLW T0348 21 :DKSKDELICKGDRLAFP 1ptq 253 :GLVKQGLKCEDCGMNVH T0348 47 :ESEAREL 1ptq 270 :HKCREKV T0348 65 :HHHH 1ptq 277 :ANLC Number of specific fragments extracted= 5 number of extra gaps= 0 total=228 Number of alignments=80 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 16 :GPLVFDKSKDELICKGDRL 1ptq 248 :GSLLWGLVKQGLKCEDCGM Number of specific fragments extracted= 1 number of extra gaps= 0 total=229 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 11 :CPLCKG 1ptq 244 :CDHCGS T0348 18 :LVFDKSKDELICKGDRL 1ptq 250 :LLWGLVKQGLKCEDCGM Number of specific fragments extracted= 2 number of extra gaps= 0 total=231 Number of alignments=81 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 11 :CPLCKG 1ptq 244 :CDHCGS T0348 18 :LVFDKSKDELICKGDRLAF 1ptq 250 :LLWGLVKQGLKCEDCGMNV Number of specific fragments extracted= 2 number of extra gaps= 0 total=233 Number of alignments=82 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 10 :VCPLCKGPLV 1ptq 243 :FCDHCGSLLW T0348 21 :DKSKDELICKGDRLAF 1ptq 253 :GLVKQGLKCEDCGMNV Number of specific fragments extracted= 2 number of extra gaps= 0 total=235 Number of alignments=83 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)C11 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 Warning: unaligning (T0348)L46 because last residue in template chain is (1ptq)C280 T0348 1 :MDAKFLEILV 1ptq 231 :HRFKVYNYMS T0348 13 :LC 1ptq 243 :FC T0348 15 :KGPLVFDKSKDELICKGDR 1ptq 247 :CGSLLWGLVKQGLKCEDCG T0348 34 :LAFPIKDGIPMM 1ptq 268 :VHHKCREKVANL Number of specific fragments extracted= 4 number of extra gaps= 1 total=239 Number of alignments=84 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)C11 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 Warning: unaligning (T0348)L46 because last residue in template chain is (1ptq)C280 T0348 1 :MDAKFLEILV 1ptq 231 :HRFKVYNYMS T0348 13 :LC 1ptq 243 :FC T0348 15 :KGPLVFDKSKDELICKGDRL 1ptq 247 :CGSLLWGLVKQGLKCEDCGM T0348 35 :AFPIKDGIPMM 1ptq 269 :HHKCREKVANL Number of specific fragments extracted= 4 number of extra gaps= 1 total=243 Number of alignments=85 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 1 :MD 1ptq 231 :HR T0348 10 :VCPLCK 1ptq 243 :FCDHCG T0348 17 :PLVFDKSKDELICKGDRLAFP 1ptq 249 :SLLWGLVKQGLKCEDCGMNVH T0348 58 :EVKLEHHHHHH 1ptq 270 :HKCREKVANLC Number of specific fragments extracted= 4 number of extra gaps= 0 total=247 Number of alignments=86 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 1 :MD 1ptq 231 :HR T0348 10 :VCPLCKGPLV 1ptq 243 :FCDHCGSLLW T0348 21 :DKSKDELICKGDRLAFP 1ptq 253 :GLVKQGLKCEDCGMNVH T0348 58 :EVKLEHHHHHH 1ptq 270 :HKCREKVANLC Number of specific fragments extracted= 4 number of extra gaps= 0 total=251 Number of alignments=87 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 16 :GPLVFDKSKDELICKGDRL 1ptq 248 :GSLLWGLVKQGLKCEDCGM Number of specific fragments extracted= 1 number of extra gaps= 0 total=252 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 11 :CPLC 1ptq 244 :CDHC T0348 16 :GPLVFDKSKDELICKGDRL 1ptq 248 :GSLLWGLVKQGLKCEDCGM Number of specific fragments extracted= 2 number of extra gaps= 0 total=254 Number of alignments=88 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 10 :VCPLCK 1ptq 243 :FCDHCG T0348 17 :PLVFDKSKDELICKGDRLAF 1ptq 249 :SLLWGLVKQGLKCEDCGMNV Number of specific fragments extracted= 2 number of extra gaps= 0 total=256 Number of alignments=89 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 10 :VCPLCKGPLV 1ptq 243 :FCDHCGSLLW T0348 21 :DKSKDELICKGDRLAF 1ptq 253 :GLVKQGLKCEDCGMNV Number of specific fragments extracted= 2 number of extra gaps= 0 total=258 Number of alignments=90 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)C11 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 Warning: unaligning (T0348)L46 because last residue in template chain is (1ptq)C280 T0348 1 :MDAKFLEILV 1ptq 231 :HRFKVYNYMS T0348 13 :LCK 1ptq 243 :FCD T0348 16 :GPLVFDKSKDELICKGD 1ptq 248 :GSLLWGLVKQGLKCEDC T0348 33 :RLAFPIKDGIPMM 1ptq 267 :NVHHKCREKVANL Number of specific fragments extracted= 4 number of extra gaps= 1 total=262 Number of alignments=91 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set Warning: unaligning (T0348)C11 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1ptq)T242 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1ptq)T242 T0348 1 :MDAKFLEILV 1ptq 231 :HRFKVYNYMS T0348 13 :LCK 1ptq 243 :FCD T0348 16 :GPLVFDKSKDELICKGDRL 1ptq 248 :GSLLWGLVKQGLKCEDCGM T0348 35 :AFPIKDGIPMM 1ptq 269 :HHKCREKVANL Number of specific fragments extracted= 4 number of extra gaps= 1 total=266 Number of alignments=92 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 1 :MD 1ptq 231 :HR T0348 10 :VCPLCK 1ptq 243 :FCDHCG T0348 17 :PLVFDKSKDELICKGDRLAF 1ptq 249 :SLLWGLVKQGLKCEDCGMNV T0348 47 :ESEAR 1ptq 269 :HHKCR T0348 62 :EHHHHHH 1ptq 274 :EKVANLC Number of specific fragments extracted= 5 number of extra gaps= 0 total=271 Number of alignments=93 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 1 :MD 1ptq 231 :HR T0348 11 :CPLCKGPLV 1ptq 244 :CDHCGSLLW T0348 21 :DKSKDELICKGDRLAFP 1ptq 253 :GLVKQGLKCEDCGMNVH T0348 47 :ES 1ptq 270 :HK T0348 50 :A 1ptq 272 :C T0348 61 :LEHHHHHH 1ptq 273 :REKVANLC Number of specific fragments extracted= 6 number of extra gaps= 0 total=277 Number of alignments=94 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 16 :GPLVFDKSKDELICKGDRL 1ptq 248 :GSLLWGLVKQGLKCEDCGM Number of specific fragments extracted= 1 number of extra gaps= 0 total=278 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 11 :CPLC 1ptq 244 :CDHC T0348 16 :GPLVFDKSKDELICKGDRL 1ptq 248 :GSLLWGLVKQGLKCEDCGM Number of specific fragments extracted= 2 number of extra gaps= 0 total=280 Number of alignments=95 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 11 :CPLCK 1ptq 244 :CDHCG T0348 17 :PLVFDKSKDELICKGDRLAF 1ptq 249 :SLLWGLVKQGLKCEDCGMNV Number of specific fragments extracted= 2 number of extra gaps= 0 total=282 Number of alignments=96 # 1ptq read from 1ptq/merged-a2m # found chain 1ptq in template set T0348 11 :CPLCKGPLV 1ptq 244 :CDHCGSLLW T0348 21 :DKSKDELICKGDRLAF 1ptq 253 :GLVKQGLKCEDCGMNV Number of specific fragments extracted= 2 number of extra gaps= 0 total=284 Number of alignments=97 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1gnf/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1gnf expands to /projects/compbio/data/pdb/1gnf.pdb.gz 1gnf:Warning: there is no chain 1gnf will retry with 1gnfA # T0348 read from 1gnf/merged-a2m # 1gnf read from 1gnf/merged-a2m # adding 1gnf to template set # found chain 1gnf in template set T0348 1 :MDAK 1gnf 198 :GSEA T0348 9 :LVCPLCKGP 1gnf 202 :RECVNCGAT T0348 18 :LVFDKSKDELICKGDRLAFPIKD 1gnf 214 :LWRRDRTGHYLCNACGLYHKMNG T0348 49 :EARELA 1gnf 237 :QNRPLI Number of specific fragments extracted= 4 number of extra gaps= 0 total=288 Number of alignments=98 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=288 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set Warning: unaligning (T0348)E47 because last residue in template chain is (1gnf)R243 T0348 1 :MDAK 1gnf 198 :GSEA T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMML 1gnf 202 :RECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLI Number of specific fragments extracted= 2 number of extra gaps= 0 total=290 Number of alignments=99 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set Warning: unaligning (T0348)E47 because last residue in template chain is (1gnf)R243 T0348 1 :MDAK 1gnf 198 :GSEA T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMML 1gnf 202 :RECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLI Number of specific fragments extracted= 2 number of extra gaps= 0 total=292 Number of alignments=100 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 11 :CPLCKGPLVFDKSKDELIC 1gnf 207 :CGATATPLWRRDRTGHYLC Number of specific fragments extracted= 1 number of extra gaps= 0 total=293 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 9 :LVCPLCKGPLVFDKSKDELICKGDRLAF 1gnf 205 :VNCGATATPLWRRDRTGHYLCNACGLYH Number of specific fragments extracted= 1 number of extra gaps= 0 total=294 Number of alignments=101 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICK 1gnf 203 :ECVNCGATATPLWRRDRTGHYLCN Number of specific fragments extracted= 1 number of extra gaps= 0 total=295 Number of alignments=102 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 11 :CPLCKGPLVFDKSKDELICK 1gnf 207 :CGATATPLWRRDRTGHYLCN Number of specific fragments extracted= 1 number of extra gaps= 0 total=296 Number of alignments=103 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1gnf)G198 Warning: unaligning (T0348)P55 because last residue in template chain is (1gnf)R243 T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 1gnf 199 :SEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMN T0348 48 :SEARELA 1gnf 236 :GQNRPLI Number of specific fragments extracted= 2 number of extra gaps= 0 total=298 Number of alignments=104 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set Warning: unaligning (T0348)P55 because last residue in template chain is (1gnf)R243 T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 1gnf 199 :SEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMN T0348 48 :SEARELA 1gnf 236 :GQNRPLI Number of specific fragments extracted= 2 number of extra gaps= 0 total=300 Number of alignments=105 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 1 :MDA 1gnf 198 :GSE T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRL 1gnf 203 :ECVNCGATATPLWRRDRTGHYLCNACGL T0348 56 :EEEVKLEHHHHHH 1gnf 231 :YHKMNGQNRPLIR Number of specific fragments extracted= 3 number of extra gaps= 0 total=303 Number of alignments=106 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 1 :MDA 1gnf 198 :GSE T0348 10 :VCPLCKGP 1gnf 203 :ECVNCGAT T0348 29 :CKGDRL 1gnf 212 :TPLWRR T0348 38 :IKDGI 1gnf 218 :DRTGH T0348 44 :MMLES 1gnf 223 :YLCNA T0348 57 :EEVKLEHHHHH 1gnf 228 :CGLYHKMNGQN Number of specific fragments extracted= 6 number of extra gaps= 0 total=309 Number of alignments=107 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRL 1gnf 203 :ECVNCGATATPLWRRDRTGHYLCNACGL Number of specific fragments extracted= 1 number of extra gaps= 0 total=310 Number of alignments=108 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAF 1gnf 202 :RECVNCGATATPLWRRDRTGHYLCNACGLYH Number of specific fragments extracted= 1 number of extra gaps= 0 total=311 Number of alignments=109 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRL 1gnf 207 :CGATATPLWRRDRTGHYLCNACGL Number of specific fragments extracted= 1 number of extra gaps= 0 total=312 Number of alignments=110 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 53 :LAPEEEVKLEHHHHH 1gnf 224 :LCNACGLYHKMNGQN Number of specific fragments extracted= 1 number of extra gaps= 0 total=313 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1gnf)G198 Warning: unaligning (T0348)P55 because last residue in template chain is (1gnf)R243 T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1gnf 199 :SEARECVNCGATATPLWRRDRTGHYLCNACGLYHK T0348 46 :LESEARELA 1gnf 234 :MNGQNRPLI Number of specific fragments extracted= 2 number of extra gaps= 0 total=315 Number of alignments=111 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set Warning: unaligning (T0348)P55 because last residue in template chain is (1gnf)R243 T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 1gnf 199 :SEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMN T0348 48 :SEARELA 1gnf 236 :GQNRPLI Number of specific fragments extracted= 2 number of extra gaps= 0 total=317 Number of alignments=112 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 1 :MDAK 1gnf 198 :GSEA T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRL 1gnf 202 :RECVNCGATATPLWRRDRTGHYLCNACGL T0348 56 :EEEVKLEHHHHHH 1gnf 231 :YHKMNGQNRPLIR Number of specific fragments extracted= 3 number of extra gaps= 0 total=320 Number of alignments=113 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 1 :MDA 1gnf 198 :GSE T0348 10 :VCPLCKGP 1gnf 203 :ECVNCGAT T0348 29 :CKGDRLA 1gnf 212 :TPLWRRD T0348 39 :KD 1gnf 219 :RT T0348 50 :ARELAPEEEVKLEHHHHH 1gnf 221 :GHYLCNACGLYHKMNGQN Number of specific fragments extracted= 5 number of extra gaps= 0 total=325 Number of alignments=114 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLA 1gnf 203 :ECVNCGATATPLWRRDRTGHYLCNACGLY Number of specific fragments extracted= 1 number of extra gaps= 0 total=326 Number of alignments=115 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAF 1gnf 202 :RECVNCGATATPLWRRDRTGHYLCNACGLYH Number of specific fragments extracted= 1 number of extra gaps= 0 total=327 Number of alignments=116 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRL 1gnf 206 :NCGATATPLWRRDRTGHYLCNACGL Number of specific fragments extracted= 1 number of extra gaps= 0 total=328 Number of alignments=117 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 52 :ELAPEEEVKLEHHHHH 1gnf 223 :YLCNACGLYHKMNGQN Number of specific fragments extracted= 1 number of extra gaps= 0 total=329 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1gnf)G198 Warning: unaligning (T0348)E47 because last residue in template chain is (1gnf)R243 T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMML 1gnf 199 :SEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLI Number of specific fragments extracted= 1 number of extra gaps= 0 total=330 Number of alignments=118 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1gnf)G198 T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKD 1gnf 199 :SEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNG T0348 62 :EHHHHHH 1gnf 237 :QNRPLIR Number of specific fragments extracted= 2 number of extra gaps= 0 total=332 Number of alignments=119 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 1 :MDAK 1gnf 198 :GSEA T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRL 1gnf 202 :RECVNCGATATPLWRRDRTGHYLCNACGL T0348 56 :EEEVKLEHHHHHH 1gnf 231 :YHKMNGQNRPLIR Number of specific fragments extracted= 3 number of extra gaps= 0 total=335 Number of alignments=120 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 1 :MD 1gnf 198 :GS T0348 11 :CPLCKGP 1gnf 204 :CVNCGAT T0348 18 :LVF 1gnf 215 :WRR T0348 38 :IKDG 1gnf 218 :DRTG T0348 43 :PMMLESEARELA 1gnf 222 :HYLCNACGLYHK T0348 59 :VKLEHHHHHH 1gnf 234 :MNGQNRPLIR Number of specific fragments extracted= 6 number of extra gaps= 0 total=341 Number of alignments=121 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLA 1gnf 203 :ECVNCGATATPLWRRDRTGHYLCNACGLY Number of specific fragments extracted= 1 number of extra gaps= 0 total=342 Number of alignments=122 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAF 1gnf 202 :RECVNCGATATPLWRRDRTGHYLCNACGLYH Number of specific fragments extracted= 1 number of extra gaps= 0 total=343 Number of alignments=123 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDR 1gnf 206 :NCGATATPLWRRDRTGHYLCNACG Number of specific fragments extracted= 1 number of extra gaps= 0 total=344 Number of alignments=124 # 1gnf read from 1gnf/merged-a2m # found chain 1gnf in template set T0348 44 :MMLESEARELAPEE 1gnf 223 :YLCNACGLYHKMNG Number of specific fragments extracted= 1 number of extra gaps= 0 total=345 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2ct7A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 2ct7A/merged-a2m # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :M 2ct7A 1 :G T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 2ct7A 20 :MRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNSGPSS Number of specific fragments extracted= 2 number of extra gaps= 0 total=347 Number of alignments=125 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :M 2ct7A 1 :G T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLES 2ct7A 21 :RDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQH T0348 49 :EARELAPEEEV 2ct7A 72 :DFQNWKRMNSG T0348 65 :HHHH 2ct7A 83 :PSSG Number of specific fragments extracted= 4 number of extra gaps= 0 total=351 Number of alignments=126 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKG 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=352 Number of alignments=127 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKG 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=353 Number of alignments=128 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set Warning: unaligning (T0348)H63 because last residue in template chain is (2ct7A)G86 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLE 2ct7A 18 :VLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQ T0348 48 :SEARELAPEEEVKLE 2ct7A 71 :EDFQNWKRMNSGPSS Number of specific fragments extracted= 2 number of extra gaps= 0 total=355 Number of alignments=129 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set Warning: unaligning (T0348)H63 because last residue in template chain is (2ct7A)G86 T0348 1 :M 2ct7A 1 :G T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLE 2ct7A 20 :MRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQ T0348 48 :SEARELAPEEEVKLE 2ct7A 71 :EDFQNWKRMNSGPSS Number of specific fragments extracted= 3 number of extra gaps= 0 total=358 Number of alignments=130 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKG 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=359 Number of alignments=131 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKG 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=360 Number of alignments=132 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 2ct7A 18 :VLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNSGPSS Number of specific fragments extracted= 1 number of extra gaps= 0 total=361 Number of alignments=133 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 2ct7A 18 :VLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNSGPSS Number of specific fragments extracted= 1 number of extra gaps= 0 total=362 Number of alignments=134 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 8 :ILVCPLCKGPLVFDKSKDELICK 2ct7A 25 :FLWCAQCSFGFIYEREQLEATCP Number of specific fragments extracted= 1 number of extra gaps= 0 total=363 Number of alignments=135 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICK 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCP Number of specific fragments extracted= 1 number of extra gaps= 0 total=364 Number of alignments=136 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELIC 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATC Number of specific fragments extracted= 1 number of extra gaps= 0 total=365 Number of alignments=137 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 8 :ILVCPLCKGPLVFDKSKDELICKGDRLAF 2ct7A 25 :FLWCAQCSFGFIYEREQLEATCPQCHQTF Number of specific fragments extracted= 1 number of extra gaps= 0 total=366 Number of alignments=138 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDAKFLE 2ct7A 10 :FHKKLTE T0348 8 :ILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 2ct7A 25 :FLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNSGPS Number of specific fragments extracted= 2 number of extra gaps= 0 total=368 Number of alignments=139 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDAKFL 2ct7A 10 :FHKKLT T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDG 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCK T0348 44 :MMLESEARELAPEEEVKLEHHHHH 2ct7A 59 :RQWEEQHRGRSCEDFQNWKRMNSG Number of specific fragments extracted= 3 number of extra gaps= 0 total=371 Number of alignments=140 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDA 2ct7A 1 :GSS T0348 8 :ILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDG 2ct7A 25 :FLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCK T0348 44 :MMLESEARELAPEEEVKLEHHHHH 2ct7A 59 :RQWEEQHRGRSCEDFQNWKRMNSG Number of specific fragments extracted= 3 number of extra gaps= 0 total=374 Number of alignments=141 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDA 2ct7A 1 :GSS T0348 9 :LVCPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 26 :LWCAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELAPEEEVKLEHHHHH 2ct7A 58 :KRQWEEQHRGRSCEDFQNWKRMNSG Number of specific fragments extracted= 3 number of extra gaps= 0 total=377 Number of alignments=142 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVR Number of specific fragments extracted= 1 number of extra gaps= 0 total=378 Number of alignments=143 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVR Number of specific fragments extracted= 1 number of extra gaps= 0 total=379 Number of alignments=144 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 9 :LVCPLCKGPLVFDKSKDELICKGDRLAFPIKDG 2ct7A 26 :LWCAQCSFGFIYEREQLEATCPQCHQTFCVRCK T0348 44 :MMLESEARELAPEEEVKLEHHHHHH 2ct7A 59 :RQWEEQHRGRSCEDFQNWKRMNSGP Number of specific fragments extracted= 2 number of extra gaps= 0 total=381 Number of alignments=145 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 27 :WCAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELAPEEEVKLEHHHHHH 2ct7A 58 :KRQWEEQHRGRSCEDFQNWKRMNSGP Number of specific fragments extracted= 2 number of extra gaps= 0 total=383 Number of alignments=146 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDAKFLE 2ct7A 10 :FHKKLTE T0348 8 :ILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 2ct7A 25 :FLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNSGPS Number of specific fragments extracted= 2 number of extra gaps= 0 total=385 Number of alignments=147 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDAKFL 2ct7A 10 :FHKKLT T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDG 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCK T0348 44 :MMLESEARELAPEEEVKLEHHHHH 2ct7A 59 :RQWEEQHRGRSCEDFQNWKRMNSG Number of specific fragments extracted= 3 number of extra gaps= 0 total=388 Number of alignments=148 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDA 2ct7A 1 :GSS T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELAPE 2ct7A 58 :KRQWEEQHRGRSCE T0348 57 :EEVKLEHHHHHH 2ct7A 75 :NWKRMNSGPSSG Number of specific fragments extracted= 4 number of extra gaps= 0 total=392 Number of alignments=149 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDA 2ct7A 1 :GSS T0348 9 :LVCPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 26 :LWCAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELAPE 2ct7A 58 :KRQWEEQHRGRSCE T0348 57 :EEVKLEHHHHHH 2ct7A 75 :NWKRMNSGPSSG Number of specific fragments extracted= 4 number of extra gaps= 0 total=396 Number of alignments=150 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVR Number of specific fragments extracted= 1 number of extra gaps= 0 total=397 Number of alignments=151 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVR Number of specific fragments extracted= 1 number of extra gaps= 0 total=398 Number of alignments=152 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 8 :ILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDG 2ct7A 25 :FLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCK T0348 44 :MMLESEARELAPEEEVKLEHHHHH 2ct7A 59 :RQWEEQHRGRSCEDFQNWKRMNSG Number of specific fragments extracted= 2 number of extra gaps= 0 total=400 Number of alignments=153 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 27 :WCAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELAPEEEVKLEHHHHH 2ct7A 58 :KRQWEEQHRGRSCEDFQNWKRMNSG Number of specific fragments extracted= 2 number of extra gaps= 0 total=402 Number of alignments=154 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDAKFLE 2ct7A 10 :FHKKLTE T0348 8 :ILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKL 2ct7A 25 :FLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKR T0348 62 :EHHHHHH 2ct7A 80 :NSGPSSG Number of specific fragments extracted= 3 number of extra gaps= 0 total=405 Number of alignments=155 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MDAKFL 2ct7A 10 :FHKKLT T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKL 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKR T0348 62 :EHHHHHH 2ct7A 80 :NSGPSSG Number of specific fragments extracted= 3 number of extra gaps= 0 total=408 Number of alignments=156 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MD 2ct7A 1 :GS T0348 9 :LVCPLCKGPLVFDKSKDELICKGDRLAFPIKDG 2ct7A 26 :LWCAQCSFGFIYEREQLEATCPQCHQTFCVRCK T0348 44 :MMLESEARELAPEEE 2ct7A 59 :RQWEEQHRGRSCEDF T0348 59 :VKLEHHHHHH 2ct7A 77 :KRMNSGPSSG Number of specific fragments extracted= 4 number of extra gaps= 0 total=412 Number of alignments=157 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 1 :MD 2ct7A 1 :GS T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 28 :CAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELAPEE 2ct7A 58 :KRQWEEQHRGRSCED T0348 58 :EVKLEHHHHHH 2ct7A 76 :WKRMNSGPSSG Number of specific fragments extracted= 4 number of extra gaps= 0 total=416 Number of alignments=158 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVR Number of specific fragments extracted= 1 number of extra gaps= 0 total=417 Number of alignments=159 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 2ct7A 24 :KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVR Number of specific fragments extracted= 1 number of extra gaps= 0 total=418 Number of alignments=160 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 9 :LVCPLCKGPLVFDKSKDELICKGDRLAFPIKDG 2ct7A 26 :LWCAQCSFGFIYEREQLEATCPQCHQTFCVRCK T0348 44 :MMLESEARELAPEEEVKLEHHHHH 2ct7A 59 :RQWEEQHRGRSCEDFQNWKRMNSG Number of specific fragments extracted= 2 number of extra gaps= 0 total=420 Number of alignments=161 # 2ct7A read from 2ct7A/merged-a2m # found chain 2ct7A in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFPIKD 2ct7A 28 :CAQCSFGFIYEREQLEATCPQCHQTFCVRC T0348 43 :PMMLESEARELA 2ct7A 58 :KRQWEEQHRGRS Number of specific fragments extracted= 2 number of extra gaps= 0 total=422 Number of alignments=162 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1bc8C/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1bc8C/merged-a2m # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 3 :AKFLEILVCPL 1bc8C 5 :ITLWQFLLQLL T0348 14 :CKGPLVFDKSK 1bc8C 20 :NKHMICWTSND T0348 25 :DEL 1bc8C 57 :DKL T0348 28 :I 1bc8C 72 :I T0348 29 :CKGDRLAFPIKDGIP 1bc8C 75 :VNGQKFVYKFVSYPE T0348 65 :HHHH 1bc8C 90 :ILNM Number of specific fragments extracted= 6 number of extra gaps= 0 total=428 Number of alignments=163 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 30 :KGDRLAFPIKDGIP 1bc8C 76 :NGQKFVYKFVSYPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=429 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1bc8C)M1 T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKGDRLAFPI 1bc8C 2 :DSAITLWQFLLQLLQKPQNKHMICWTSNDGQFKL T0348 39 :KDGIPMMLESEARELAPEEEVKLEHHHHHH 1bc8C 49 :KNKPNMNYDKLSRALRYYYVKNIIKKVNGQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=431 Number of alignments=164 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1bc8C)M1 T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 1bc8C 2 :DSAITLWQFLLQLLQKPQNKHMICWTSNDGQFKLL T0348 40 :DGIPMMLESEARELAPEEEVK 1bc8C 50 :NKPNMNYDKLSRALRYYYVKN T0348 61 :LEHHHHHH 1bc8C 86 :SYPEILNM Number of specific fragments extracted= 3 number of extra gaps= 0 total=434 Number of alignments=165 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 8 :ILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDG 1bc8C 5 :ITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQA Number of specific fragments extracted= 1 number of extra gaps= 0 total=435 Number of alignments=166 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 18 :LVFDKSKDELICKGDRLAFPIK 1bc8C 15 :LQKPQNKHMICWTSNDGQFKLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=436 Number of alignments=167 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MDAKFLEILVCPLCKGP 1bc8C 3 :SAITLWQFLLQLLQKPQ T0348 23 :SKDELICKGDRLAFPIKDG 1bc8C 20 :NKHMICWTSNDGQFKLLQA T0348 42 :IPMMLESEARELAPEEEVKLEHHHHHH 1bc8C 61 :RALRYYYVKNIIKKVNGQKFVYKFVSY Number of specific fragments extracted= 3 number of extra gaps= 0 total=439 Number of alignments=168 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MD 1bc8C 1 :MD T0348 3 :AKFLEIL 1bc8C 5 :ITLWQFL T0348 10 :VCPLCKGPLVFDKSKDEL 1bc8C 16 :QKPQNKHMICWTSNDGQF T0348 28 :ICKGDRLAF 1bc8C 35 :LLQAEEVAR T0348 37 :PIKDGIPMMLESEARELAPEEE 1bc8C 47 :IRKNKPNMNYDKLSRALRYYYV T0348 59 :VKLEHHHH 1bc8C 78 :QKFVYKFV T0348 67 :HH 1bc8C 92 :NM Number of specific fragments extracted= 7 number of extra gaps= 0 total=446 Number of alignments=169 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 18 :LVFDKSKDELIC 1bc8C 14 :LLQKPQNKHMIC Number of specific fragments extracted= 1 number of extra gaps= 0 total=447 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=447 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 34 :LAFPIKDGIPMMLESE 1bc8C 24 :ICWTSNDGQFKLLQAE Number of specific fragments extracted= 1 number of extra gaps= 0 total=448 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=448 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDE 1bc8C 7 :LWQFLLQLLQKPQNKHMICWTSNDGQ T0348 27 :LICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 1bc8C 36 :LQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVN Number of specific fragments extracted= 2 number of extra gaps= 0 total=450 Number of alignments=170 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDE 1bc8C 7 :LWQFLLQLLQKPQNKHMICWTSNDGQ T0348 27 :LICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 1bc8C 36 :LQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVN Number of specific fragments extracted= 2 number of extra gaps= 0 total=452 Number of alignments=171 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MD 1bc8C 1 :MD T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDR 1bc8C 9 :QFLLQLLQKPQNKHMICWTSNDGQFKLLQAE T0348 34 :LAFPIKDGIPMMLESEARELAPEEEVKL 1bc8C 43 :RLWGIRKNKPNMNYDKLSRALRYYYVKN T0348 62 :EHHHHH 1bc8C 75 :VNGQKF Number of specific fragments extracted= 4 number of extra gaps= 0 total=456 Number of alignments=172 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MD 1bc8C 1 :MD T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKG 1bc8C 9 :QFLLQLLQKPQNKHMICWTSNDGQFKLLQ T0348 52 :ELAPEEEVKL 1bc8C 53 :NMNYDKLSRA T0348 62 :E 1bc8C 67 :Y Number of specific fragments extracted= 4 number of extra gaps= 0 total=460 Number of alignments=173 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDE 1bc8C 7 :LWQFLLQLLQKPQNKHMICWTSNDGQ T0348 27 :LICKGDRLAFPIKDGIPMMLESE 1bc8C 36 :LQAEEVARLWGIRKNKPNMNYDK Number of specific fragments extracted= 2 number of extra gaps= 0 total=462 Number of alignments=174 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 3 :AKFLEILVCPLCKGPLVFDKSKDE 1bc8C 9 :QFLLQLLQKPQNKHMICWTSNDGQ T0348 27 :LICKGDRLAFPIKDGIPMMLESEAR 1bc8C 36 :LQAEEVARLWGIRKNKPNMNYDKLS Number of specific fragments extracted= 2 number of extra gaps= 0 total=464 Number of alignments=175 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKGDR 1bc8C 10 :FLLQLLQKPQNKHMICWTSNDGQFKLLQAE T0348 34 :LAFPIKDGIPMMLESEAR 1bc8C 43 :RLWGIRKNKPNMNYDKLS Number of specific fragments extracted= 2 number of extra gaps= 0 total=466 Number of alignments=176 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKG 1bc8C 11 :LLQLLQKPQNKHMICWTSNDGQFKLLQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=467 Number of alignments=177 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKD 1bc8C 7 :LWQFLLQLLQKPQNKHMICWTSNDG T0348 26 :ELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 1bc8C 35 :LLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVN Number of specific fragments extracted= 2 number of extra gaps= 0 total=469 Number of alignments=178 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKD 1bc8C 7 :LWQFLLQLLQKPQNKHMICWTSNDG T0348 26 :ELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 1bc8C 35 :LLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVN Number of specific fragments extracted= 2 number of extra gaps= 0 total=471 Number of alignments=179 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MDA 1bc8C 1 :MDS T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKGDR 1bc8C 10 :FLLQLLQKPQNKHMICWTSNDGQFKLLQAE T0348 34 :LAFPIKDGIPMMLESEARELAPEEEVKL 1bc8C 43 :RLWGIRKNKPNMNYDKLSRALRYYYVKN T0348 62 :EHHHHH 1bc8C 75 :VNGQKF Number of specific fragments extracted= 4 number of extra gaps= 0 total=475 Number of alignments=180 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MD 1bc8C 1 :MD T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDR 1bc8C 9 :QFLLQLLQKPQNKHMICWTSNDGQFKLLQAE T0348 38 :IKDGIPMMLESEARELAPEEEVK 1bc8C 47 :IRKNKPNMNYDKLSRALRYYYVK T0348 61 :LEHHHHH 1bc8C 74 :KVNGQKF Number of specific fragments extracted= 4 number of extra gaps= 0 total=479 Number of alignments=181 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKD 1bc8C 7 :LWQFLLQLLQKPQNKHMICWTSNDG T0348 26 :ELICKGDRLAFPIKDGIPMMLESE 1bc8C 35 :LLQAEEVARLWGIRKNKPNMNYDK Number of specific fragments extracted= 2 number of extra gaps= 0 total=481 Number of alignments=182 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 3 :AKFLEILVCPLCKGPLVFDKSKD 1bc8C 9 :QFLLQLLQKPQNKHMICWTSNDG T0348 26 :ELICKGDRLAFPIKDGIPMMLESEAR 1bc8C 35 :LLQAEEVARLWGIRKNKPNMNYDKLS Number of specific fragments extracted= 2 number of extra gaps= 0 total=483 Number of alignments=183 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKGDR 1bc8C 10 :FLLQLLQKPQNKHMICWTSNDGQFKLLQAE T0348 34 :LAFPIKDGIPMMLESEARELAP 1bc8C 43 :RLWGIRKNKPNMNYDKLSRALR Number of specific fragments extracted= 2 number of extra gaps= 0 total=485 Number of alignments=184 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKG 1bc8C 11 :LLQLLQKPQNKHMICWTSNDGQFKLLQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=486 Number of alignments=185 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MDAK 1bc8C 1 :MDSA T0348 5 :FLEILVCPLCKGPLVFDKSKDE 1bc8C 11 :LLQLLQKPQNKHMICWTSNDGQ T0348 27 :LICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1bc8C 36 :LQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNG Number of specific fragments extracted= 3 number of extra gaps= 0 total=489 Number of alignments=186 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MDAK 1bc8C 1 :MDSA T0348 5 :FLEILVCPLCKGPLVFDKSKD 1bc8C 11 :LLQLLQKPQNKHMICWTSNDG T0348 26 :ELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHH 1bc8C 35 :LLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKV Number of specific fragments extracted= 3 number of extra gaps= 0 total=492 Number of alignments=187 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MD 1bc8C 1 :MD T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGD 1bc8C 9 :QFLLQLLQKPQNKHMICWTSNDGQFKLLQA T0348 38 :IKDGIPMMLESEAREL 1bc8C 47 :IRKNKPNMNYDKLSRA T0348 54 :APEEE 1bc8C 75 :VNGQK T0348 61 :LEHHHHHH 1bc8C 86 :SYPEILNM Number of specific fragments extracted= 5 number of extra gaps= 0 total=497 Number of alignments=188 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 1 :MD 1bc8C 1 :MD T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGD 1bc8C 9 :QFLLQLLQKPQNKHMICWTSNDGQFKLLQA T0348 39 :KD 1bc8C 51 :KP T0348 44 :MM 1bc8C 53 :NM T0348 46 :LESEAREL 1bc8C 59 :LSRALRYY T0348 54 :APEEEV 1bc8C 75 :VNGQKF T0348 63 :HHHHHH 1bc8C 88 :PEILNM Number of specific fragments extracted= 7 number of extra gaps= 0 total=504 Number of alignments=189 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 5 :FLEILVCPLCKGPLVFDKSKDE 1bc8C 11 :LLQLLQKPQNKHMICWTSNDGQ T0348 27 :LICKGDRLAFPIKDGIPMMLESE 1bc8C 36 :LQAEEVARLWGIRKNKPNMNYDK Number of specific fragments extracted= 2 number of extra gaps= 0 total=506 Number of alignments=190 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 4 :KFLEILVCPLCKGPLVFDKSKD 1bc8C 10 :FLLQLLQKPQNKHMICWTSNDG T0348 26 :ELICKGDRLAFPIKDGIPMMLESE 1bc8C 35 :LLQAEEVARLWGIRKNKPNMNYDK Number of specific fragments extracted= 2 number of extra gaps= 0 total=508 Number of alignments=191 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKG 1bc8C 10 :FLLQLLQKPQNKHMICWTSNDGQFKLLQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=509 Number of alignments=192 # 1bc8C read from 1bc8C/merged-a2m # found chain 1bc8C in template set T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKG 1bc8C 10 :FLLQLLQKPQNKHMICWTSNDGQFKLLQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=510 Number of alignments=193 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1pft/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1pft/merged-a2m # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 1 :MDAK 1pft 1 :MVNK T0348 8 :ILVCPLCKG 1pft 5 :QKVCPACES T0348 17 :PLVFDKSKDELICK 1pft 15 :ELIYDPERGEIVCA T0348 33 :RLAFPIKDGIPMML 1pft 29 :KCGYVIEENIIDMG T0348 47 :ESEAR 1pft 44 :EWRAF Number of specific fragments extracted= 5 number of extra gaps= 0 total=515 Number of alignments=194 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 9 :LVCPLCKG 1pft 6 :KVCPACES T0348 17 :PLVFDKSKDELICKG 1pft 15 :ELIYDPERGEIVCAK Number of specific fragments extracted= 2 number of extra gaps= 0 total=517 Number of alignments=195 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set Warning: unaligning (T0348)P55 because last residue in template chain is (1pft)A50 T0348 1 :M 1pft 1 :M T0348 5 :FLEILVCPLCKGP 1pft 2 :VNKQKVCPACESA T0348 18 :LVFDKSKDELICKGDRL 1pft 16 :LIYDPERGEIVCAKCGY T0348 38 :IKDGIPMMLESEARELA 1pft 33 :VIEENIIDMGPEWRAFD Number of specific fragments extracted= 4 number of extra gaps= 0 total=521 Number of alignments=196 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 1 :MDA 1pft 1 :MVN T0348 7 :EILVCPLCKGP 1pft 4 :KQKVCPACESA T0348 18 :LVFDKSKDELICKG 1pft 16 :LIYDPERGEIVCAK T0348 42 :IPMMLESEARELAPE 1pft 30 :CGYVIEENIIDMGPE T0348 63 :HHHHHH 1pft 45 :WRAFDA Number of specific fragments extracted= 5 number of extra gaps= 0 total=526 Number of alignments=197 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 5 :FLEILVCPLCKGP 1pft 2 :VNKQKVCPACESA T0348 18 :LVFDKSKDELICKG 1pft 16 :LIYDPERGEIVCAK Number of specific fragments extracted= 2 number of extra gaps= 0 total=528 Number of alignments=198 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 7 :EILVCPLCKGP 1pft 4 :KQKVCPACESA T0348 18 :LVFDKSKDELICKG 1pft 16 :LIYDPERGEIVCAK Number of specific fragments extracted= 2 number of extra gaps= 0 total=530 Number of alignments=199 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLCK 1pft 7 :VCPACE T0348 16 :GPLVFDKSKDELIC 1pft 14 :AELIYDPERGEIVC Number of specific fragments extracted= 2 number of extra gaps= 0 total=532 Number of alignments=200 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLCKG 1pft 7 :VCPACES T0348 17 :PLVFDKSKDELICKG 1pft 15 :ELIYDPERGEIVCAK T0348 34 :LAFPI 1pft 30 :CGYVI Number of specific fragments extracted= 3 number of extra gaps= 0 total=535 Number of alignments=201 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1pft)A50 T0348 1 :MDAKFL 1pft 1 :MVNKQK T0348 10 :VCPLC 1pft 7 :VCPAC T0348 15 :KGPLVFDKSKDELICKGDR 1pft 13 :SAELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLESEAREL 1pft 32 :YVIEENIIDMGPEWRAFD Number of specific fragments extracted= 4 number of extra gaps= 0 total=539 Number of alignments=202 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set Warning: unaligning (T0348)P55 because last residue in template chain is (1pft)A50 T0348 1 :MDAK 1pft 1 :MVNK T0348 8 :ILVCPLC 1pft 5 :QKVCPAC T0348 15 :KGPLVFDKSKDELICKGDR 1pft 13 :SAELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLES 1pft 32 :YVIEENIIDMGPE T0348 50 :ARELA 1pft 45 :WRAFD Number of specific fragments extracted= 5 number of extra gaps= 0 total=544 Number of alignments=203 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 1 :MDA 1pft 1 :MVN T0348 10 :VCPLC 1pft 7 :VCPAC T0348 15 :KGPLVFDKSKDELICKGDR 1pft 13 :SAELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMML 1pft 32 :YVIEENIIDMG T0348 61 :LEHHHHHH 1pft 43 :PEWRAFDA Number of specific fragments extracted= 5 number of extra gaps= 0 total=549 Number of alignments=204 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 1 :MDA 1pft 1 :MVN T0348 10 :VCPLCKG 1pft 7 :VCPACES T0348 17 :PLVFDKSKDELICKGDRLA 1pft 15 :ELIYDPERGEIVCAKCGYV T0348 38 :IKDGIPMM 1pft 34 :IEENIIDM T0348 60 :KLEHHHHHH 1pft 42 :GPEWRAFDA Number of specific fragments extracted= 5 number of extra gaps= 0 total=554 Number of alignments=205 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLC 1pft 7 :VCPAC T0348 15 :KGPLVFDKSKDELICKGDR 1pft 13 :SAELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLES 1pft 32 :YVIEENIIDMGPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=557 Number of alignments=206 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLC 1pft 7 :VCPAC T0348 15 :KGPLVFDKSKDELICKGDR 1pft 13 :SAELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLE 1pft 32 :YVIEENIIDMGP Number of specific fragments extracted= 3 number of extra gaps= 0 total=560 Number of alignments=207 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLC 1pft 7 :VCPAC T0348 15 :KGPLVFDKSKDELICKGDR 1pft 13 :SAELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLES 1pft 32 :YVIEENIIDMGPE T0348 50 :AREL 1pft 45 :WRAF Number of specific fragments extracted= 4 number of extra gaps= 0 total=564 Number of alignments=208 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLCKG 1pft 7 :VCPACES T0348 17 :PLVFDKSKDELICKGDRLA 1pft 15 :ELIYDPERGEIVCAKCGYV T0348 38 :IK 1pft 34 :IE Number of specific fragments extracted= 3 number of extra gaps= 0 total=567 Number of alignments=209 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1pft)A50 T0348 1 :MDAKFL 1pft 1 :MVNKQK T0348 10 :VCPLC 1pft 7 :VCPAC T0348 15 :KGPLVFDKSKDELICKGDR 1pft 13 :SAELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLESEAREL 1pft 32 :YVIEENIIDMGPEWRAFD Number of specific fragments extracted= 4 number of extra gaps= 0 total=571 Number of alignments=210 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set Warning: unaligning (T0348)P55 because last residue in template chain is (1pft)A50 T0348 1 :MDA 1pft 1 :MVN T0348 7 :EILVCPLC 1pft 4 :KQKVCPAC T0348 15 :KGPLVFDKSKDELICKGDR 1pft 13 :SAELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLES 1pft 32 :YVIEENIIDMGPE T0348 50 :ARELA 1pft 45 :WRAFD Number of specific fragments extracted= 5 number of extra gaps= 0 total=576 Number of alignments=211 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 1 :MDAKF 1pft 1 :MVNKQ T0348 9 :LVCPLC 1pft 6 :KVCPAC T0348 15 :KGPLVFDKSKDELICKGDRLA 1pft 13 :SAELIYDPERGEIVCAKCGYV T0348 38 :IKDGIP 1pft 34 :IEENII T0348 58 :EVKLEHHHHHH 1pft 40 :DMGPEWRAFDA Number of specific fragments extracted= 5 number of extra gaps= 0 total=581 Number of alignments=212 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 1 :MDA 1pft 1 :MVN T0348 10 :VCPLCKG 1pft 7 :VCPACES T0348 17 :PLVFDKSKDELICKGDRLA 1pft 15 :ELIYDPERGEIVCAKCGYV T0348 38 :IKDGIPMM 1pft 34 :IEENIIDM T0348 60 :KLEHHHHHH 1pft 42 :GPEWRAFDA Number of specific fragments extracted= 5 number of extra gaps= 0 total=586 Number of alignments=213 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLC 1pft 7 :VCPAC T0348 15 :KGPLVFDKSKDELICKGDR 1pft 13 :SAELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLES 1pft 32 :YVIEENIIDMGPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=589 Number of alignments=214 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLC 1pft 7 :VCPAC T0348 15 :KGPLVFDKSKDELICKGDR 1pft 13 :SAELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLE 1pft 32 :YVIEENIIDMGP Number of specific fragments extracted= 3 number of extra gaps= 0 total=592 Number of alignments=215 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLC 1pft 7 :VCPAC T0348 15 :KGPLVFDKSKDELICKGDRL 1pft 13 :SAELIYDPERGEIVCAKCGY T0348 37 :PIKDGI 1pft 33 :VIEENI T0348 59 :VKLEHHHHHH 1pft 39 :IDMGPEWRAF Number of specific fragments extracted= 4 number of extra gaps= 0 total=596 Number of alignments=216 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLCKG 1pft 7 :VCPACES T0348 17 :PLVFDKSKDELICKGDRLA 1pft 15 :ELIYDPERGEIVCAKCGYV T0348 38 :IKDGIPMM 1pft 34 :IEENIIDM Number of specific fragments extracted= 3 number of extra gaps= 0 total=599 Number of alignments=217 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1pft)M1 Warning: unaligning (T0348)A54 because last residue in template chain is (1pft)A50 T0348 5 :FLEILVCPLCK 1pft 2 :VNKQKVCPACE T0348 16 :GPLVFDKSKDELICKGDR 1pft 14 :AELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLESEAREL 1pft 32 :YVIEENIIDMGPEWRAFD Number of specific fragments extracted= 3 number of extra gaps= 0 total=602 Number of alignments=218 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 1 :MDAK 1pft 1 :MVNK T0348 8 :ILVCPLCK 1pft 5 :QKVCPACE T0348 16 :GPLVFDKSKDELICKGDR 1pft 14 :AELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMMLESE 1pft 32 :YVIEENIIDMGPEW T0348 64 :HHHHH 1pft 46 :RAFDA Number of specific fragments extracted= 5 number of extra gaps= 0 total=607 Number of alignments=219 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 1 :MDAK 1pft 1 :MVNK T0348 10 :VCPLCK 1pft 7 :VCPACE T0348 16 :GPLVFDKSKDELICKGDR 1pft 14 :AELIYDPERGEIVCAKCG T0348 36 :FPIKDGIP 1pft 32 :YVIEENII T0348 58 :EVKLEHHHHHH 1pft 40 :DMGPEWRAFDA Number of specific fragments extracted= 5 number of extra gaps= 0 total=612 Number of alignments=220 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 1 :MDA 1pft 1 :MVN T0348 10 :VCPLCKG 1pft 7 :VCPACES T0348 17 :PLVFDKSKDELICKGDRLA 1pft 15 :ELIYDPERGEIVCAKCGYV T0348 38 :IKDGIP 1pft 34 :IEENII T0348 58 :EVKLEHHHHHH 1pft 40 :DMGPEWRAFDA Number of specific fragments extracted= 5 number of extra gaps= 0 total=617 Number of alignments=221 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLCK 1pft 7 :VCPACE T0348 16 :GPLVFDKSKDELICKGDR 1pft 14 :AELIYDPERGEIVCAKCG T0348 36 :FPIKDGI 1pft 32 :YVIEENI Number of specific fragments extracted= 3 number of extra gaps= 0 total=620 Number of alignments=222 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLCK 1pft 7 :VCPACE T0348 16 :GPLVFDKSKDELICKGDR 1pft 14 :AELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMM 1pft 32 :YVIEENIIDM Number of specific fragments extracted= 3 number of extra gaps= 0 total=623 Number of alignments=223 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 10 :VCPLCK 1pft 7 :VCPACE T0348 16 :GPLVFDKSKDELICKGDR 1pft 14 :AELIYDPERGEIVCAKCG T0348 36 :FPIKDGIPMM 1pft 32 :YVIEENIIDM T0348 60 :KLEHHHH 1pft 42 :GPEWRAF Number of specific fragments extracted= 4 number of extra gaps= 0 total=627 Number of alignments=224 # 1pft read from 1pft/merged-a2m # found chain 1pft in template set T0348 11 :CPLCKG 1pft 8 :CPACES T0348 17 :PLVFDKSKDELICKGDRLA 1pft 15 :ELIYDPERGEIVCAKCGYV T0348 38 :IKDGIP 1pft 34 :IEENII T0348 59 :VKLEHHHH 1pft 40 :DMGPEWRA Number of specific fragments extracted= 4 number of extra gaps= 0 total=631 Number of alignments=225 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vd4A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vd4A/merged-a2m # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set Warning: unaligning (T0348)R51 because last residue in template chain is (1vd4A)R174 T0348 2 :DAKFLEILVCPLCKGPL 1vd4A 120 :DSTNRASFKCPVCSSTF T0348 19 :VFDKSKDELICK 1vd4A 144 :LFDPMTGTFRCT T0348 33 :RLAFPIKDGIPMMLESEA 1vd4A 156 :FCHTEVEEDESAMPKKDA Number of specific fragments extracted= 3 number of extra gaps= 0 total=634 Number of alignments=226 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set Warning: unaligning (T0348)R51 because last residue in template chain is (1vd4A)R174 T0348 5 :FLEILVCPLCKGP 1vd4A 123 :NRASFKCPVCSST T0348 18 :LVFDKSKDELICK 1vd4A 143 :QLFDPMTGTFRCT T0348 33 :RLAFPIKDGIPMMLESEA 1vd4A 156 :FCHTEVEEDESAMPKKDA Number of specific fragments extracted= 3 number of extra gaps= 0 total=637 Number of alignments=227 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 9 :LVCPLCKGPLVFDKS 1vd4A 152 :FRCTFCHTEVEEDES Number of specific fragments extracted= 1 number of extra gaps= 0 total=638 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 10 :VCPLCKGP 1vd4A 128 :KCPVCSST T0348 18 :LVFDKSKDELICK 1vd4A 143 :QLFDPMTGTFRCT Number of specific fragments extracted= 2 number of extra gaps= 0 total=640 Number of alignments=228 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set Warning: unaligning (T0348)I42 because last residue in template chain is (1vd4A)R174 T0348 2 :DAKFLEILVCPLCKGPL 1vd4A 120 :DSTNRASFKCPVCSSTF T0348 19 :VFDKSKDELICKG 1vd4A 144 :LFDPMTGTFRCTF T0348 32 :DRLAFPIKDG 1vd4A 164 :DESAMPKKDA Number of specific fragments extracted= 3 number of extra gaps= 0 total=643 Number of alignments=229 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set Warning: unaligning (T0348)I42 because last residue in template chain is (1vd4A)R174 T0348 4 :KFLEILVCPLCKGP 1vd4A 122 :TNRASFKCPVCSST T0348 18 :LVFDKSKDELICKGDR 1vd4A 143 :QLFDPMTGTFRCTFCH T0348 34 :LAFPIKDG 1vd4A 166 :SAMPKKDA Number of specific fragments extracted= 3 number of extra gaps= 0 total=646 Number of alignments=230 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 9 :LVCPLCKGPLVFDKS 1vd4A 152 :FRCTFCHTEVEEDES Number of specific fragments extracted= 1 number of extra gaps= 0 total=647 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 9 :LVCPLCKGP 1vd4A 127 :FKCPVCSST T0348 18 :LVFDKSKDELICKG 1vd4A 143 :QLFDPMTGTFRCTF T0348 32 :DRLAFP 1vd4A 164 :DESAMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=650 Number of alignments=231 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set Warning: unaligning (T0348)R51 because last residue in template chain is (1vd4A)R174 T0348 1 :MDAKFLEILVCPLCKGPL 1vd4A 119 :RDSTNRASFKCPVCSSTF T0348 19 :VFDKSKDELIC 1vd4A 144 :LFDPMTGTFRC T0348 32 :DRLAFPIKDGIPMMLESEA 1vd4A 155 :TFCHTEVEEDESAMPKKDA Number of specific fragments extracted= 3 number of extra gaps= 0 total=653 Number of alignments=232 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :MDA 1vd4A 114 :IET T0348 4 :KFLEILVCPLCKGP 1vd4A 122 :TNRASFKCPVCSST T0348 18 :LVFDKSKDELICKG 1vd4A 143 :QLFDPMTGTFRCTF T0348 50 :ARELAPEEE 1vd4A 158 :HTEVEEDES Number of specific fragments extracted= 4 number of extra gaps= 0 total=657 Number of alignments=233 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 7 :EILVCPLCKGPLVFDKS 1vd4A 150 :GTFRCTFCHTEVEEDES Number of specific fragments extracted= 1 number of extra gaps= 0 total=658 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 7 :EILVCPLCKGPLVFDKS 1vd4A 150 :GTFRCTFCHTEVEEDES Number of specific fragments extracted= 1 number of extra gaps= 0 total=659 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 11 :CPLC 1vd4A 129 :CPVC Number of specific fragments extracted= 1 number of extra gaps= 0 total=660 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 10 :VCPLCKGP 1vd4A 128 :KCPVCSST Number of specific fragments extracted= 1 number of extra gaps= 0 total=661 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDE 1vd4A 119 :RDSTNRASFKCPVCSSTFTDLEANQL T0348 27 :LICKGDR 1vd4A 152 :FRCTFCH T0348 53 :LAPEEEVKLEHHHHHH 1vd4A 159 :TEVEEDESAMPKKDAR Number of specific fragments extracted= 3 number of extra gaps= 0 total=664 Number of alignments=234 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDE 1vd4A 119 :RDSTNRASFKCPVCSSTFTDLEANQL T0348 27 :LICKGDR 1vd4A 152 :FRCTFCH T0348 53 :LAPEEEVKLEHHHHHH 1vd4A 159 :TEVEEDESAMPKKDAR Number of specific fragments extracted= 3 number of extra gaps= 0 total=667 Number of alignments=235 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :MDA 1vd4A 113 :RIE T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLA 1vd4A 145 :FDPMTGTFRCTFCHTE T0348 38 :IKDG 1vd4A 161 :VEED T0348 59 :VKLEHHHHHH 1vd4A 165 :ESAMPKKDAR Number of specific fragments extracted= 5 number of extra gaps= 0 total=672 Number of alignments=236 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :MDA 1vd4A 113 :RIE T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLA 1vd4A 145 :FDPMTGTFRCTFCHTE T0348 38 :IKDG 1vd4A 161 :VEED T0348 55 :P 1vd4A 165 :E T0348 60 :KLEHHHHHH 1vd4A 166 :SAMPKKDAR Number of specific fragments extracted= 6 number of extra gaps= 0 total=678 Number of alignments=237 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLVFDKSKDEL 1vd4A 129 :CPVCSSTFTDLEANQLF Number of specific fragments extracted= 1 number of extra gaps= 0 total=679 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 8 :ILVCPLCKGPLVFDKSKDE 1vd4A 126 :SFKCPVCSSTFTDLEANQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=680 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLA 1vd4A 145 :FDPMTGTFRCTFCHTE Number of specific fragments extracted= 2 number of extra gaps= 0 total=682 Number of alignments=238 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLA 1vd4A 145 :FDPMTGTFRCTFCHTE Number of specific fragments extracted= 2 number of extra gaps= 0 total=684 Number of alignments=239 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :MDAKFLEILVCPLCKGPLVF 1vd4A 119 :RDSTNRASFKCPVCSSTFTD T0348 21 :DKSKDELICKGDR 1vd4A 146 :DPMTGTFRCTFCH T0348 53 :LAPEEEVKLEHHHHHH 1vd4A 159 :TEVEEDESAMPKKDAR Number of specific fragments extracted= 3 number of extra gaps= 0 total=687 Number of alignments=240 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :MDAKFLEILVCPLCKGPLVF 1vd4A 119 :RDSTNRASFKCPVCSSTFTD T0348 21 :DKSKDELICKGDR 1vd4A 146 :DPMTGTFRCTFCH T0348 53 :LAPEEEVKLEHHHHHH 1vd4A 159 :TEVEEDESAMPKKDAR Number of specific fragments extracted= 3 number of extra gaps= 0 total=690 Number of alignments=241 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :MDA 1vd4A 113 :RIE T0348 7 :EILVCPLCKGPLV 1vd4A 125 :ASFKCPVCSSTFT T0348 20 :FDKSKDELICKGDRLA 1vd4A 145 :FDPMTGTFRCTFCHTE T0348 38 :IKD 1vd4A 161 :VEE T0348 58 :EVKLEHHHHHH 1vd4A 164 :DESAMPKKDAR Number of specific fragments extracted= 5 number of extra gaps= 0 total=695 Number of alignments=242 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :MDA 1vd4A 113 :RIE T0348 7 :EILVCPLCKGPLV 1vd4A 125 :ASFKCPVCSSTFT T0348 20 :FDKSKDELICKGDRLA 1vd4A 145 :FDPMTGTFRCTFCHTE T0348 38 :IKDG 1vd4A 161 :VEED T0348 48 :SEA 1vd4A 165 :ESA T0348 62 :EHHHHHH 1vd4A 168 :MPKKDAR Number of specific fragments extracted= 6 number of extra gaps= 0 total=701 Number of alignments=243 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLVFDKSKDEL 1vd4A 129 :CPVCSSTFTDLEANQLF Number of specific fragments extracted= 1 number of extra gaps= 0 total=702 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 8 :ILVCPLCKGPLVFDKS 1vd4A 126 :SFKCPVCSSTFTDLEA T0348 25 :DELIC 1vd4A 142 :NQLFD Number of specific fragments extracted= 2 number of extra gaps= 0 total=704 Number of alignments=244 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLA 1vd4A 145 :FDPMTGTFRCTFCHTE Number of specific fragments extracted= 2 number of extra gaps= 0 total=706 Number of alignments=245 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLA 1vd4A 145 :FDPMTGTFRCTFCHTE T0348 38 :IK 1vd4A 161 :VE Number of specific fragments extracted= 3 number of extra gaps= 0 total=709 Number of alignments=246 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set Warning: unaligning (T0348)R51 because last residue in template chain is (1vd4A)R174 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDE 1vd4A 119 :RDSTNRASFKCPVCSSTFTDLEANQL T0348 27 :LICKGDRL 1vd4A 152 :FRCTFCHT T0348 37 :PIKDGIPMMLESEA 1vd4A 160 :EVEEDESAMPKKDA Number of specific fragments extracted= 3 number of extra gaps= 0 total=712 Number of alignments=247 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set Warning: unaligning (T0348)R51 because last residue in template chain is (1vd4A)R174 T0348 2 :DAKFLEILVCPLCKGPLVFDKSKDE 1vd4A 120 :DSTNRASFKCPVCSSTFTDLEANQL T0348 27 :LICKGDRL 1vd4A 152 :FRCTFCHT T0348 37 :PIKDGIPMMLESEA 1vd4A 160 :EVEEDESAMPKKDA Number of specific fragments extracted= 3 number of extra gaps= 0 total=715 Number of alignments=248 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :MDA 1vd4A 113 :RIE T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLAFP 1vd4A 145 :FDPMTGTFRCTFCHTEVE T0348 57 :EEVKLEHHHHHH 1vd4A 163 :EDESAMPKKDAR Number of specific fragments extracted= 4 number of extra gaps= 0 total=719 Number of alignments=249 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 1 :M 1vd4A 113 :R T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLAFP 1vd4A 145 :FDPMTGTFRCTFCHTEVE T0348 40 :D 1vd4A 163 :E T0348 54 :APE 1vd4A 164 :DES T0348 61 :LEHHHHHH 1vd4A 167 :AMPKKDAR Number of specific fragments extracted= 6 number of extra gaps= 0 total=725 Number of alignments=250 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLVFDKSKDEL 1vd4A 129 :CPVCSSTFTDLEANQLF Number of specific fragments extracted= 1 number of extra gaps= 0 total=726 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 9 :LVCPLCKGPLVFDKSKDE 1vd4A 127 :FKCPVCSSTFTDLEANQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=727 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLAFP 1vd4A 145 :FDPMTGTFRCTFCHTEVE Number of specific fragments extracted= 2 number of extra gaps= 0 total=729 Number of alignments=251 # 1vd4A read from 1vd4A/merged-a2m # found chain 1vd4A in template set T0348 11 :CPLCKGPLV 1vd4A 129 :CPVCSSTFT T0348 20 :FDKSKDELICKGDRLAF 1vd4A 145 :FDPMTGTFRCTFCHTEV Number of specific fragments extracted= 2 number of extra gaps= 0 total=731 Number of alignments=252 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1rfs/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1rfs expands to /projects/compbio/data/pdb/1rfs.pdb.gz 1rfs:Warning: there is no chain 1rfs will retry with 1rfsA # T0348 read from 1rfs/merged-a2m # 1rfs read from 1rfs/merged-a2m # adding 1rfs to template set # found chain 1rfs in template set T0348 3 :AK 1rfs 55 :AK T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKGDRLAFPI 1rfs 101 :FGINAVCTHLGCVVPFNAAENKFICPCHGSQYNN T0348 40 :DG 1rfs 135 :QG T0348 42 :IPMMLESEARELAPEEEVKLEH 1rfs 150 :AHCDVDDGKVVFVPWTETDFRT T0348 64 :HHHHH 1rfs 175 :PWWSA Number of specific fragments extracted= 5 number of extra gaps= 0 total=736 Number of alignments=253 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 24 :KDELICKGDRLAFPIKDGIPMMLE 1rfs 68 :WLKTHAPGDRTLTQGLKGDPTYLV Number of specific fragments extracted= 1 number of extra gaps= 0 total=737 Number of alignments=254 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 1 :MDAKFLEILV 1rfs 85 :GDPTYLVVES T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFPI 1rfs 107 :CTHLGCVVPFNAAENKFICPCHGSQYNN T0348 40 :DGIPMMLESEARELAPEEEVKLEHHHHHH 1rfs 135 :QGRVVRGPAPLSLALAHCDVDDGKVVFVP Number of specific fragments extracted= 3 number of extra gaps= 0 total=740 Number of alignments=255 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 4 :KFLEILV 1rfs 88 :TYLVVES T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFPI 1rfs 107 :CTHLGCVVPFNAAENKFICPCHGSQYNN T0348 40 :DGIPMM 1rfs 135 :QGRVVR T0348 46 :LESEARELAPEEEVKLEHH 1rfs 154 :VDDGKVVFVPWTETDFRTG T0348 65 :HHHH 1rfs 176 :WWSA Number of specific fragments extracted= 5 number of extra gaps= 0 total=745 Number of alignments=256 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELIC 1rfs 106 :VCTHLGCVVPFNAAENKFIC Number of specific fragments extracted= 1 number of extra gaps= 0 total=746 Number of alignments=257 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFPI 1rfs 107 :CTHLGCVVPFNAAENKFICPCHGSQYNN T0348 40 :DGI 1rfs 135 :QGR Number of specific fragments extracted= 2 number of extra gaps= 0 total=748 Number of alignments=258 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 1 :MDAK 1rfs 94 :SDKT T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKGDRLAFPI 1rfs 101 :FGINAVCTHLGCVVPFNAAENKFICPCHGSQYNN T0348 40 :DG 1rfs 135 :QG T0348 42 :IPMMLESEARELAPEEEVKLEHHHHHH 1rfs 141 :GPAPLSLALAHCDVDDGKVVFVPWTET Number of specific fragments extracted= 4 number of extra gaps= 0 total=752 Number of alignments=259 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 2 :DAKFL 1rfs 55 :AKDAL T0348 7 :EILVCPLCKGPLVFDK 1rfs 77 :RTLTQGLKGDPTYLVV T0348 23 :SKDELICK 1rfs 119 :AENKFICP T0348 31 :GDRLAFPIKDGIPMML 1rfs 136 :GRVVRGPAPLSLALAH T0348 47 :ESEARELAPEEEV 1rfs 155 :DDGKVVFVPWTET T0348 60 :KLEHHH 1rfs 170 :RTGEAP Number of specific fragments extracted= 6 number of extra gaps= 0 total=758 Number of alignments=260 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 11 :CPLCKGPL 1rfs 112 :CVVPFNAA T0348 24 :KDELICKGDRLAFPI 1rfs 120 :ENKFICPCHGSQYNN T0348 40 :DG 1rfs 135 :QG Number of specific fragments extracted= 3 number of extra gaps= 0 total=761 Number of alignments=261 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 11 :CPLCKG 1rfs 112 :CVVPFN T0348 19 :VF 1rfs 118 :AA T0348 24 :KDELICKGDRLAFPI 1rfs 120 :ENKFICPCHGSQYNN T0348 40 :DGI 1rfs 135 :QGR Number of specific fragments extracted= 4 number of extra gaps= 0 total=765 Number of alignments=262 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 1 :MDAKFLEILVCPLC 1rfs 54 :IAKDALGNDVIAAE T0348 15 :KGPLVFDKSKDELIC 1rfs 111 :GCVVPFNAAENKFIC T0348 30 :KGDRLAFPIKDG 1rfs 135 :QGRVVRGPAPLS T0348 42 :IPMMLESEARELAPEEEVKLEHHHHHH 1rfs 150 :AHCDVDDGKVVFVPWTETDFRTGEAPW Number of specific fragments extracted= 4 number of extra gaps= 0 total=769 Number of alignments=263 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 1 :MDAKFLE 1rfs 54 :IAKDALG T0348 8 :ILVCPLCKGPLVFDKSKDELIC 1rfs 104 :NAVCTHLGCVVPFNAAENKFIC T0348 30 :KGDRLAFPIKDGI 1rfs 135 :QGRVVRGPAPLSL T0348 43 :PMMLESEARELAPEEEVKLEHHHHHH 1rfs 151 :HCDVDDGKVVFVPWTETDFRTGEAPW Number of specific fragments extracted= 4 number of extra gaps= 0 total=773 Number of alignments=264 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 9 :LVCPLCKGPLV 1rfs 110 :LGCVVPFNAAE T0348 25 :DELIC 1rfs 121 :NKFIC Number of specific fragments extracted= 2 number of extra gaps= 0 total=775 Number of alignments=265 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 22 :KSKDELICKGDRL 1rfs 68 :WLKTHAPGDRTLT Number of specific fragments extracted= 1 number of extra gaps= 0 total=776 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELIC 1rfs 106 :VCTHLGCVVPFNAAENKFIC Number of specific fragments extracted= 1 number of extra gaps= 0 total=777 Number of alignments=266 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELICK 1rfs 106 :VCTHLGCVVPFNAAENKFICP Number of specific fragments extracted= 1 number of extra gaps= 0 total=778 Number of alignments=267 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set Warning: unaligning (T0348)P12 because first residue in template chain is (1rfs)T53 T0348 13 :LCKGPLVFDKSKDE 1rfs 54 :IAKDALGNDVIAAE T0348 27 :LICKGDRLAFP 1rfs 123 :FICPCHGSQYN T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHHH 1rfs 139 :VRGPAPLSLALAHCDVDDGKVVFVPWTETD Number of specific fragments extracted= 3 number of extra gaps= 0 total=781 Number of alignments=268 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 19 :VFDKSKD 1rfs 55 :AKDALGN T0348 27 :LICKGDRLAFP 1rfs 123 :FICPCHGSQYN T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHHH 1rfs 139 :VRGPAPLSLALAHCDVDDGKVVFVPWTETD Number of specific fragments extracted= 3 number of extra gaps= 0 total=784 Number of alignments=269 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 4 :KFLEI 1rfs 67 :EWLKT T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQYN T0348 38 :IKDGIPMML 1rfs 154 :VDDGKVVFV T0348 52 :ELAPEEEVKLEHHHHHH 1rfs 163 :PWTETDFRTGEAPWWSA Number of specific fragments extracted= 4 number of extra gaps= 0 total=788 Number of alignments=270 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 3 :AKFLE 1rfs 66 :AEWLK T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQYN T0348 38 :IKDGIPMMLE 1rfs 139 :VRGPAPLSLA T0348 51 :RELAP 1rfs 162 :VPWTE T0348 60 :KLEHHHHH 1rfs 167 :TDFRTGEA Number of specific fragments extracted= 5 number of extra gaps= 0 total=793 Number of alignments=271 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAF 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQY Number of specific fragments extracted= 1 number of extra gaps= 0 total=794 Number of alignments=272 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 23 :SKDELICKGDRLAF 1rfs 119 :AENKFICPCHGSQY Number of specific fragments extracted= 1 number of extra gaps= 0 total=795 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQYN Number of specific fragments extracted= 1 number of extra gaps= 0 total=796 Number of alignments=273 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQYN Number of specific fragments extracted= 1 number of extra gaps= 0 total=797 Number of alignments=274 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set Warning: unaligning (T0348)P12 because first residue in template chain is (1rfs)T53 T0348 13 :LCKGPLVF 1rfs 54 :IAKDALGN T0348 21 :DKSKDELICKGDRLAFP 1rfs 117 :NAAENKFICPCHGSQYN T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHHH 1rfs 139 :VRGPAPLSLALAHCDVDDGKVVFVPWTETD Number of specific fragments extracted= 3 number of extra gaps= 0 total=800 Number of alignments=275 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set Warning: unaligning (T0348)P17 because first residue in template chain is (1rfs)T53 T0348 18 :LV 1rfs 54 :IA T0348 21 :DKSKDELICKGDRLAFP 1rfs 117 :NAAENKFICPCHGSQYN T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHHH 1rfs 139 :VRGPAPLSLALAHCDVDDGKVVFVPWTETD Number of specific fragments extracted= 3 number of extra gaps= 0 total=803 Number of alignments=276 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 21 :DKSKDELICKGDRLAFP 1rfs 117 :NAAENKFICPCHGSQYN T0348 38 :IKDGIPM 1rfs 154 :VDDGKVV T0348 50 :ARELAPEEEVKLEHHHHHH 1rfs 161 :FVPWTETDFRTGEAPWWSA Number of specific fragments extracted= 3 number of extra gaps= 0 total=806 Number of alignments=277 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 3 :AKFLE 1rfs 66 :AEWLK T0348 12 :PLCKGPLVF 1rfs 71 :THAPGDRTL T0348 21 :DKSKDELICKGDRLAFP 1rfs 117 :NAAENKFICPCHGSQYN T0348 38 :IKDGIPMMLE 1rfs 139 :VRGPAPLSLA T0348 50 :ARELAP 1rfs 161 :FVPWTE T0348 60 :KLEHHHHH 1rfs 167 :TDFRTGEA Number of specific fragments extracted= 6 number of extra gaps= 0 total=812 Number of alignments=278 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAF 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQY Number of specific fragments extracted= 1 number of extra gaps= 0 total=813 Number of alignments=279 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 20 :FDKSKDELICKGDRLAF 1rfs 116 :FNAAENKFICPCHGSQY Number of specific fragments extracted= 1 number of extra gaps= 0 total=814 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQYN Number of specific fragments extracted= 1 number of extra gaps= 0 total=815 Number of alignments=280 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQYN Number of specific fragments extracted= 1 number of extra gaps= 0 total=816 Number of alignments=281 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set Warning: unaligning (T0348)D21 because first residue in template chain is (1rfs)T53 T0348 22 :KSKDELICKGDRLAF 1rfs 54 :IAKDALGNDVIAAEW T0348 37 :PIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1rfs 74 :PGDRTLTQGLKGDPTYLVVESDKTLATFGINA Number of specific fragments extracted= 2 number of extra gaps= 0 total=818 Number of alignments=282 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 24 :KDELICKGDRLAFP 1rfs 120 :ENKFICPCHGSQYN T0348 38 :IKDGIPMML 1rfs 139 :VRGPAPLSL T0348 47 :ESEAR 1rfs 154 :VDDGK T0348 52 :ELAPEEEVKLEHHHHHH 1rfs 163 :PWTETDFRTGEAPWWSA Number of specific fragments extracted= 4 number of extra gaps= 0 total=822 Number of alignments=283 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 3 :AKFLEI 1rfs 66 :AEWLKT T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQYN T0348 38 :IKDGIPMML 1rfs 139 :VRGPAPLSL T0348 51 :RELAPEEEVKLEHHHHHH 1rfs 162 :VPWTETDFRTGEAPWWSA Number of specific fragments extracted= 4 number of extra gaps= 0 total=826 Number of alignments=284 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 3 :AKFLE 1rfs 66 :AEWLK T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQYN T0348 38 :IKDGIPMMLE 1rfs 139 :VRGPAPLSLA T0348 51 :RELAPEEEVKLEHHHHHH 1rfs 162 :VPWTETDFRTGEAPWWSA Number of specific fragments extracted= 4 number of extra gaps= 0 total=830 Number of alignments=285 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAF 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQY Number of specific fragments extracted= 1 number of extra gaps= 0 total=831 Number of alignments=286 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 17 :PLVFDKSKDELICKGDRLAF 1rfs 113 :VVPFNAAENKFICPCHGSQY Number of specific fragments extracted= 1 number of extra gaps= 0 total=832 Number of alignments=287 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQYN Number of specific fragments extracted= 1 number of extra gaps= 0 total=833 Number of alignments=288 # 1rfs read from 1rfs/merged-a2m # found chain 1rfs in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1rfs 106 :VCTHLGCVVPFNAAENKFICPCHGSQYN T0348 38 :IKDGIPM 1rfs 139 :VRGPAPL Number of specific fragments extracted= 2 number of extra gaps= 0 total=835 Number of alignments=289 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1l1oC/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1l1oC expands to /projects/compbio/data/pdb/1l1o.pdb.gz 1l1oC:# T0348 read from 1l1oC/merged-a2m # 1l1oC read from 1l1oC/merged-a2m # adding 1l1oC to template set # found chain 1l1oC in template set Warning: unaligning (T0348)P43 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1l1oC)I587 Warning: unaligning (T0348)L46 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1l1oC)I587 T0348 1 :MDAKFLEILVCPL 1l1oC 471 :LRKENCMYQACPT T0348 14 :CK 1l1oC 486 :CN T0348 16 :GPLVFDKSKDELICKGDRLAFPIKDGI 1l1oC 554 :NEQAFEEVFQNANFRSFIFRVRVKVET T0348 47 :ESEARELAP 1l1oC 588 :KATVMDVKP T0348 56 :EEEVKLEHHHHHH 1l1oC 604 :RRLVMSIRRSALM Number of specific fragments extracted= 5 number of extra gaps= 0 total=840 Number of alignments=290 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1l1oC)N439 Warning: unaligning (T0348)M45 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1l1oC)I587 Warning: unaligning (T0348)L46 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1l1oC)I587 Warning: unaligning (T0348)H67 because last residue in template chain is (1l1oC)M616 T0348 3 :AKFLEI 1l1oC 459 :PDYFSS T0348 9 :LVCPL 1l1oC 479 :QACPT T0348 14 :C 1l1oC 486 :C T0348 15 :KGP 1l1oC 504 :DTE T0348 18 :LVFDKSKDELI 1l1oC 530 :TCFQESAEAIL T0348 30 :KGDR 1l1oC 543 :NAAY T0348 34 :LAFPIKD 1l1oC 558 :FEEVFQN T0348 41 :GIPM 1l1oC 577 :KVET T0348 47 :ESEARELAP 1l1oC 588 :KATVMDVKP T0348 56 :EEEVKLEHHHH 1l1oC 605 :RLVMSIRRSAL Number of specific fragments extracted= 10 number of extra gaps= 0 total=850 Number of alignments=291 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 11 :CPLCKGPLV 1l1oC 500 :CEKCDTEFP Number of specific fragments extracted= 1 number of extra gaps= 0 total=851 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPLCKGPLV 1l1oC 499 :RCEKCDTEFP T0348 20 :FDK 1l1oC 521 :ADF Number of specific fragments extracted= 2 number of extra gaps= 0 total=853 Number of alignments=292 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set Warning: unaligning (T0348)H67 because last residue in template chain is (1l1oC)M616 T0348 1 :MDAKFLEILV 1l1oC 457 :DKPDYFSSVA T0348 11 :CPLCKG 1l1oC 500 :CEKCDT T0348 17 :PLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEV 1l1oC 529 :VTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFI T0348 60 :KLEHHHH 1l1oC 609 :SIRRSAL Number of specific fragments extracted= 4 number of extra gaps= 0 total=857 Number of alignments=293 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1l1oC)N439 T0348 3 :AK 1l1oC 440 :TN T0348 5 :FLEI 1l1oC 461 :YFSS T0348 9 :LVCPL 1l1oC 479 :QACPT T0348 14 :CKGP 1l1oC 486 :CNKK T0348 19 :VFDKSKDELICKG 1l1oC 490 :VIDQQNGLYRCEK T0348 32 :DRLAFPIKDGIP 1l1oC 514 :MILSVNIADFQE T0348 44 :MMLESEARELA 1l1oC 530 :TCFQESAEAIL T0348 55 :PEEEVKL 1l1oC 559 :EEVFQNA T0348 62 :EHHH 1l1oC 611 :RRSA Number of specific fragments extracted= 9 number of extra gaps= 0 total=866 Number of alignments=294 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 18 :LVFDKSKDELI 1l1oC 530 :TCFQESAEAIL Number of specific fragments extracted= 1 number of extra gaps= 0 total=867 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 11 :CPL 1l1oC 481 :CPT T0348 14 :CKGP 1l1oC 486 :CNKK T0348 18 :LVFDKSKDEL 1l1oC 530 :TCFQESAEAI Number of specific fragments extracted= 3 number of extra gaps= 0 total=870 Number of alignments=295 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 1 :MDAKFLEILVCPL 1l1oC 471 :LRKENCMYQACPT T0348 14 :CKGPLVFDKSK 1l1oC 486 :CNKKVIDQQNG T0348 26 :ELICKGDRLAFP 1l1oC 497 :LYRCEKCDTEFP T0348 38 :IKDG 1l1oC 520 :IADF T0348 43 :PMMLESEARELAPEEEVKLEHHHHHH 1l1oC 546 :YLGELKDKNEQAFEEVFQNANFRSFI Number of specific fragments extracted= 5 number of extra gaps= 0 total=875 Number of alignments=296 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 1 :MDAKFLEILVCPL 1l1oC 471 :LRKENCMYQACPT T0348 14 :CKGPLVFDKSK 1l1oC 486 :CNKKVIDQQNG T0348 26 :ELICKGDRLAFP 1l1oC 497 :LYRCEKCDTEFP T0348 38 :IKDGIPM 1l1oC 520 :IADFQEN T0348 45 :MLESEARELAP 1l1oC 539 :ILGQNAAYLGE T0348 56 :EEEVKLEHHHH 1l1oC 560 :EVFQNANFRSF T0348 67 :H 1l1oC 600 :R Number of specific fragments extracted= 7 number of extra gaps= 0 total=882 Number of alignments=297 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPL 1l1oC 480 :ACPT T0348 14 :CKGPLVFDKSK 1l1oC 486 :CNKKVIDQQNG T0348 26 :ELICKG 1l1oC 497 :LYRCEK Number of specific fragments extracted= 3 number of extra gaps= 0 total=885 Number of alignments=298 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPL 1l1oC 480 :ACPT T0348 14 :CKGPLVFDKSK 1l1oC 486 :CNKKVIDQQNG T0348 26 :ELICKGDR 1l1oC 497 :LYRCEKCD Number of specific fragments extracted= 3 number of extra gaps= 0 total=888 Number of alignments=299 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set Warning: unaligning (T0348)M44 because last residue in template chain is (1l1oC)M616 T0348 31 :GDRLAFPIKDGIP 1l1oC 603 :GRRLVMSIRRSAL Number of specific fragments extracted= 1 number of extra gaps= 0 total=889 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=889 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELI 1l1oC 471 :LRKENCMYQACPTQDCNKKVIDQQNGLY T0348 29 :CKGDRLAFP 1l1oC 500 :CEKCDTEFP T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHHHH 1l1oC 516 :LSVNIADFQENQWVTCFQESAEAILGQNAAY Number of specific fragments extracted= 3 number of extra gaps= 0 total=892 Number of alignments=300 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPLCKGPLVF 1l1oC 480 :ACPTQDCNKKV T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHHHH 1l1oC 516 :LSVNIADFQENQWVTCFQESAEAILGQNAAY Number of specific fragments extracted= 3 number of extra gaps= 0 total=895 Number of alignments=301 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set Warning: unaligning (T0348)M45 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1l1oC)I587 T0348 5 :FLEI 1l1oC 445 :LYEV T0348 10 :VCPL 1l1oC 480 :ACPT T0348 14 :CKGPLVFDKSKDE 1l1oC 486 :CNKKVIDQQNGLY T0348 31 :GDRLAFPIKDGIPM 1l1oC 567 :FRSFIFRVRVKVET T0348 51 :RELAPEEEVKLEHHHHH 1l1oC 595 :KPVDYREYGRRLVMSIR Number of specific fragments extracted= 5 number of extra gaps= 0 total=900 Number of alignments=302 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 3 :AKFLE 1l1oC 446 :YEVKS T0348 10 :VCPL 1l1oC 480 :ACPT T0348 14 :CKGPLV 1l1oC 486 :CNKKVI T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP T0348 49 :EARELAPEEEVKLEHHHHHH 1l1oC 549 :ELKDKNEQAFEEVFQNANFR Number of specific fragments extracted= 5 number of extra gaps= 0 total=905 Number of alignments=303 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPLCKGPLVFDKSKDELI 1l1oC 480 :ACPTQDCNKKVIDQQNGLY T0348 29 :CKGDRLAFP 1l1oC 500 :CEKCDTEFP Number of specific fragments extracted= 2 number of extra gaps= 0 total=907 Number of alignments=304 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPLCKGPLVF 1l1oC 480 :ACPTQDCNKKV T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP Number of specific fragments extracted= 2 number of extra gaps= 0 total=909 Number of alignments=305 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPL 1l1oC 480 :ACPT T0348 14 :CKGPLV 1l1oC 486 :CNKKVI T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP Number of specific fragments extracted= 3 number of extra gaps= 0 total=912 Number of alignments=306 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPL 1l1oC 480 :ACPT T0348 14 :CKGPLV 1l1oC 486 :CNKKVI T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP Number of specific fragments extracted= 3 number of extra gaps= 0 total=915 Number of alignments=307 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1l1oC)N439 T0348 5 :FLEILVCPLCKGPLVF 1l1oC 440 :TNWKTLYEVKSENLGQ T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHHHH 1l1oC 516 :LSVNIADFQENQWVTCFQESAEAILGQNAAY Number of specific fragments extracted= 3 number of extra gaps= 0 total=918 Number of alignments=308 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 5 :FLEILV 1l1oC 441 :NWKTLY T0348 12 :PLCKGPLV 1l1oC 447 :EVKSENLG T0348 30 :KGDRLAFPIKDGI 1l1oC 566 :NFRSFIFRVRVKV Number of specific fragments extracted= 3 number of extra gaps= 0 total=921 Number of alignments=309 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 5 :FLEILVCPLCKGP 1l1oC 445 :LYEVKSENLGQGD T0348 18 :LV 1l1oC 460 :DY T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP T0348 49 :EARELAPEEEVKLEHHHHH 1l1oC 593 :DVKPVDYREYGRRLVMSIR Number of specific fragments extracted= 4 number of extra gaps= 0 total=925 Number of alignments=310 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 1 :MD 1l1oC 439 :NT T0348 5 :FLEILVCPLCKGP 1l1oC 445 :LYEVKSENLGQGD T0348 18 :LVF 1l1oC 460 :DYF T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP T0348 49 :EARELAPEEEVKLEHHHHHH 1l1oC 549 :ELKDKNEQAFEEVFQNANFR Number of specific fragments extracted= 5 number of extra gaps= 0 total=930 Number of alignments=311 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPLC 1l1oC 480 :ACPTQ T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1l1oC 486 :CNKKVIDQQNGLYRCEKCDTEFP Number of specific fragments extracted= 2 number of extra gaps= 0 total=932 Number of alignments=312 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPLC 1l1oC 480 :ACPTQ T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1l1oC 486 :CNKKVIDQQNGLYRCEKCDTEFP Number of specific fragments extracted= 2 number of extra gaps= 0 total=934 Number of alignments=313 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPL 1l1oC 480 :ACPT T0348 14 :CKGPLV 1l1oC 486 :CNKKVI T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP Number of specific fragments extracted= 3 number of extra gaps= 0 total=937 Number of alignments=314 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPL 1l1oC 480 :ACPT T0348 14 :CKGPLV 1l1oC 486 :CNKKVI T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP Number of specific fragments extracted= 3 number of extra gaps= 0 total=940 Number of alignments=315 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELI 1l1oC 471 :LRKENCMYQACPTQDCNKKVIDQQNGLY T0348 29 :CKGDRLAFP 1l1oC 500 :CEKCDTEFP T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHHHH 1l1oC 532 :FQESAEAILGQNAAYLGELKDKNEQAFEEVF Number of specific fragments extracted= 3 number of extra gaps= 0 total=943 Number of alignments=316 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPLCKGPLVF 1l1oC 480 :ACPTQDCNKKV T0348 21 :DKSKDELICKGDRLAFP 1l1oC 492 :DQQNGLYRCEKCDTEFP T0348 39 :KDGIPMMLESEARELAPEEEV 1l1oC 533 :QESAEAILGQNAAYLGELKDK Number of specific fragments extracted= 3 number of extra gaps= 0 total=946 Number of alignments=317 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 5 :FLEI 1l1oC 445 :LYEV T0348 10 :VCPLCK 1l1oC 480 :ACPTQD T0348 16 :GPLVFDKSKDELICKGDRLAFP 1l1oC 487 :NKKVIDQQNGLYRCEKCDTEFP T0348 47 :ESEARELAPEEEVKL 1l1oC 547 :LGELKDKNEQAFEEV Number of specific fragments extracted= 4 number of extra gaps= 0 total=950 Number of alignments=318 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 3 :AKFLE 1l1oC 446 :YEVKS T0348 10 :VCPL 1l1oC 480 :ACPT T0348 14 :CKGPLVFD 1l1oC 486 :CNKKVIDQ T0348 23 :SKDELICKGDRLAFP 1l1oC 494 :QNGLYRCEKCDTEFP T0348 47 :ESEAREL 1l1oC 533 :QESAEAI T0348 54 :APEEEVKLEHHHHHH 1l1oC 554 :NEQAFEEVFQNANFR Number of specific fragments extracted= 6 number of extra gaps= 0 total=956 Number of alignments=319 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPLCKGPLVFDKSKDELI 1l1oC 480 :ACPTQDCNKKVIDQQNGLY T0348 29 :CKGDRLAFP 1l1oC 500 :CEKCDTEFP Number of specific fragments extracted= 2 number of extra gaps= 0 total=958 Number of alignments=320 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPLCKGPL 1l1oC 480 :ACPTQDCNK T0348 19 :VFDKSKDELICKGDRLAFP 1l1oC 490 :VIDQQNGLYRCEKCDTEFP Number of specific fragments extracted= 2 number of extra gaps= 0 total=960 Number of alignments=321 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPLCK 1l1oC 480 :ACPTQD T0348 16 :GPLVFDKSKDELICKGDRLAFP 1l1oC 487 :NKKVIDQQNGLYRCEKCDTEFP Number of specific fragments extracted= 2 number of extra gaps= 0 total=962 Number of alignments=322 # 1l1oC read from 1l1oC/merged-a2m # found chain 1l1oC in template set T0348 10 :VCPL 1l1oC 480 :ACPT T0348 14 :CKGPLVFD 1l1oC 486 :CNKKVIDQ T0348 23 :SKDELICKGDRLAFP 1l1oC 494 :QNGLYRCEKCDTEFP Number of specific fragments extracted= 3 number of extra gaps= 0 total=965 Number of alignments=323 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1e4uA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1e4uA expands to /projects/compbio/data/pdb/1e4u.pdb.gz 1e4uA:# T0348 read from 1e4uA/merged-a2m # 1e4uA read from 1e4uA/merged-a2m # adding 1e4uA to template set # found chain 1e4uA in template set T0348 1 :MDAKF 1e4uA 1 :MSRSP T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGI 1e4uA 9 :EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRI T0348 43 :PMMLESEARELAPEEEVKLEHH 1e4uA 49 :ENGLCPACRKPYPEDPAVYKPL T0348 65 :HHHH 1e4uA 75 :LQRI Number of specific fragments extracted= 4 number of extra gaps= 0 total=969 Number of alignments=324 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 9 :LVCPLCKGPLVFDK 1e4uA 12 :VECPLCMEPLEIDD Number of specific fragments extracted= 1 number of extra gaps= 0 total=970 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1e4uA)I78 T0348 1 :MDAKFLEILVCPLCKGPLVFD 1e4uA 4 :SPDAKEDPVECPLCMEPLEID T0348 22 :KSKDELICKGDRLAFPIKDGIPMMLESEAREL 1e4uA 46 :RTDENGLCPACRKPYPEDPAVYKPLSQEELQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=972 Number of alignments=325 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1e4uA)I78 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSK 1e4uA 4 :SPDAKEDPVECPLCMEPLEIDDIN T0348 25 :DELIC 1e4uA 29 :FPCTC T0348 30 :KGDRLAFPIKDGIPMMLESEAREL 1e4uA 54 :PACRKPYPEDPAVYKPLSQEELQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=975 Number of alignments=326 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 9 :LVCPLCKGPLVFDK 1e4uA 51 :GLCPACRKPYPEDP Number of specific fragments extracted= 1 number of extra gaps= 0 total=976 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 7 :EILV 1e4uA 10 :DPVE T0348 11 :CPLCKGPLVFDK 1e4uA 53 :CPACRKPYPEDP Number of specific fragments extracted= 2 number of extra gaps= 0 total=978 Number of alignments=327 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 11 :CPLCKGPLVFD 1e4uA 14 :CPLCMEPLEID Number of specific fragments extracted= 1 number of extra gaps= 0 total=979 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 10 :VCPLCKGPLVFDKS 1e4uA 13 :ECPLCMEPLEIDDI Number of specific fragments extracted= 1 number of extra gaps= 0 total=980 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1e4uA)I78 T0348 1 :MDA 1e4uA 1 :MSR T0348 4 :KFLEILVCPLCKGPLVFDK 1e4uA 7 :AKEDPVECPLCMEPLEIDD T0348 23 :SKDELICKGDRLAFPIKDGIPMMLESEAREL 1e4uA 47 :TDENGLCPACRKPYPEDPAVYKPLSQEELQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=983 Number of alignments=328 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 1 :MDA 1e4uA 1 :MSR T0348 4 :KFLEILVCPLCKGPLVFDK 1e4uA 7 :AKEDPVECPLCMEPLEIDD T0348 27 :LICKGDRLAFP 1e4uA 51 :GLCPACRKPYP T0348 55 :PEEEVKLEHHHHH 1e4uA 62 :EDPAVYKPLSQEE Number of specific fragments extracted= 4 number of extra gaps= 0 total=987 Number of alignments=329 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 1 :MDA 1e4uA 1 :MSR T0348 9 :LVCPLCKGPLVFDK 1e4uA 12 :VECPLCMEPLEIDD T0348 24 :KDE 1e4uA 26 :INF T0348 27 :LICKGDRLAFP 1e4uA 51 :GLCPACRKPYP T0348 55 :PEEEVKLEHHHHH 1e4uA 62 :EDPAVYKPLSQEE Number of specific fragments extracted= 5 number of extra gaps= 0 total=992 Number of alignments=330 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 1 :MDA 1e4uA 1 :MSR T0348 10 :VCPLCKGPLV 1e4uA 13 :ECPLCMEPLE T0348 23 :SKDE 1e4uA 23 :IDDI T0348 28 :ICKGDRLAFP 1e4uA 52 :LCPACRKPYP T0348 48 :SEARELAP 1e4uA 62 :EDPAVYKP T0348 60 :KLEHHHHHH 1e4uA 70 :LSQEELQRI Number of specific fragments extracted= 6 number of extra gaps= 0 total=998 Number of alignments=331 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 11 :CPLCKGPLVFDK 1e4uA 14 :CPLCMEPLEIDD Number of specific fragments extracted= 1 number of extra gaps= 0 total=999 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 8 :ILVCPLCKGPLVFDKSK 1e4uA 11 :PVECPLCMEPLEIDDIN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1000 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 11 :CPLCKGPLVFDK 1e4uA 14 :CPLCMEPLEIDD T0348 24 :KDELICKGDRLAF 1e4uA 26 :INFFPCTCGYQIC T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHHHH 1e4uA 45 :IRTDENGLCPACRKPYPEDPAVYKPLSQEEL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1003 Number of alignments=332 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 11 :CPLCKGPLV 1e4uA 14 :CPLCMEPLE T0348 23 :SKDE 1e4uA 23 :IDDI T0348 28 :ICKGDRLAF 1e4uA 52 :LCPACRKPY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1006 Number of alignments=333 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1e4uA)I78 T0348 1 :MDA 1e4uA 1 :MSR T0348 4 :KFLEILVCPLCKGPLVF 1e4uA 7 :AKEDPVECPLCMEPLEI T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEAREL 1e4uA 45 :IRTDENGLCPACRKPYPEDPAVYKPLSQEELQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1009 Number of alignments=334 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 1 :MDA 1e4uA 1 :MSR T0348 4 :KFLEILVCPLCKGPLVF 1e4uA 7 :AKEDPVECPLCMEPLEI T0348 21 :DKSKDELICKGDRLAFPIKDG 1e4uA 45 :IRTDENGLCPACRKPYPEDPA T0348 49 :EARELAPEEEVK 1e4uA 66 :VYKPLSQEELQR Number of specific fragments extracted= 4 number of extra gaps= 0 total=1013 Number of alignments=335 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 1 :MDA 1e4uA 1 :MSR T0348 6 :LEILVCPLCKGPLVF 1e4uA 9 :EDPVECPLCMEPLEI T0348 22 :KSKDELICKGDRLAFP 1e4uA 46 :RTDENGLCPACRKPYP T0348 48 :SEARE 1e4uA 63 :DPAVY T0348 58 :EVKLEHHHHHH 1e4uA 68 :KPLSQEELQRI Number of specific fragments extracted= 5 number of extra gaps= 0 total=1018 Number of alignments=336 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 1 :MDA 1e4uA 1 :MSR T0348 10 :VCPLCKGPLVF 1e4uA 13 :ECPLCMEPLEI T0348 24 :KDELICKGDRLAFP 1e4uA 48 :DENGLCPACRKPYP T0348 48 :SEARELAPE 1e4uA 62 :EDPAVYKPL T0348 61 :LEHHHHHH 1e4uA 71 :SQEELQRI Number of specific fragments extracted= 5 number of extra gaps= 0 total=1023 Number of alignments=337 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 11 :CPLCKGPLVF 1e4uA 14 :CPLCMEPLEI T0348 21 :DKSKDELICKGDRLAFP 1e4uA 45 :IRTDENGLCPACRKPYP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1025 Number of alignments=338 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 8 :ILVCPLCKGPLVF 1e4uA 11 :PVECPLCMEPLEI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1026 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 10 :VCPLCKGPLVF 1e4uA 13 :ECPLCMEPLEI T0348 22 :KSKDELICKGDRLAFP 1e4uA 46 :RTDENGLCPACRKPYP T0348 55 :PEEEVKLEHHHHHH 1e4uA 62 :EDPAVYKPLSQEEL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1029 Number of alignments=339 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 11 :CPLCKGPLVF 1e4uA 14 :CPLCMEPLEI T0348 24 :KDELICKGDRLAFP 1e4uA 48 :DENGLCPACRKPYP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1031 Number of alignments=340 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1e4uA)I78 T0348 1 :MDAKF 1e4uA 1 :MSRSP T0348 6 :LEILVCPLCKGPLVFDK 1e4uA 9 :EDPVECPLCMEPLEIDD T0348 23 :SKDELICKGDRLAFPIKDGIPMMLESEAREL 1e4uA 47 :TDENGLCPACRKPYPEDPAVYKPLSQEELQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1034 Number of alignments=341 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 1 :MDAKF 1e4uA 1 :MSRSP T0348 6 :LEILVCPLCKGPLVFDK 1e4uA 9 :EDPVECPLCMEPLEIDD T0348 24 :KDELICKGDRLAFPIKDGIPMML 1e4uA 48 :DENGLCPACRKPYPEDPAVYKPL T0348 61 :LEHHHHHH 1e4uA 71 :SQEELQRI Number of specific fragments extracted= 4 number of extra gaps= 0 total=1038 Number of alignments=342 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 1 :MDA 1e4uA 1 :MSR T0348 11 :CPLCKGPLVFDKS 1e4uA 14 :CPLCMEPLEIDDI T0348 24 :KDELICKGDRLAFPIKDGI 1e4uA 48 :DENGLCPACRKPYPEDPAV T0348 57 :EEVKLEHHHHHH 1e4uA 67 :YKPLSQEELQRI Number of specific fragments extracted= 4 number of extra gaps= 0 total=1042 Number of alignments=343 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 1 :MD 1e4uA 1 :MS T0348 11 :CPLCKGPLV 1e4uA 14 :CPLCMEPLE T0348 22 :KS 1e4uA 23 :ID T0348 28 :ICKGDRLAFP 1e4uA 52 :LCPACRKPYP T0348 52 :EL 1e4uA 63 :DP T0348 55 :PEEEVKLEHHHHHH 1e4uA 65 :AVYKPLSQEELQRI Number of specific fragments extracted= 6 number of extra gaps= 0 total=1048 Number of alignments=344 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 11 :CPLCKGPLVFDK 1e4uA 14 :CPLCMEPLEIDD Number of specific fragments extracted= 1 number of extra gaps= 0 total=1049 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 9 :LVCPLCKGPLVFDKSK 1e4uA 12 :VECPLCMEPLEIDDIN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1050 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 11 :CPLCKGPLVFDKS 1e4uA 14 :CPLCMEPLEIDDI T0348 24 :KDELICKGDRLAFPIKDGIP 1e4uA 48 :DENGLCPACRKPYPEDPAVY T0348 51 :RELAPEEE 1e4uA 68 :KPLSQEEL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1053 Number of alignments=345 # 1e4uA read from 1e4uA/merged-a2m # found chain 1e4uA in template set T0348 11 :CPLCKGPLV 1e4uA 14 :CPLCMEPLE T0348 30 :KGDRLAFPIKDGI 1e4uA 23 :IDDINFFPCTCGY T0348 44 :MMLESEARELAPEEEVKLEHHHHHH 1e4uA 36 :QICRFCWHRIRTDENGLCPACRKPY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1056 Number of alignments=346 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2a1rA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2a1rA expands to /projects/compbio/data/pdb/2a1r.pdb.gz 2a1rA:# T0348 read from 2a1rA/merged-a2m # 2a1rA read from 2a1rA/merged-a2m # adding 2a1rA to template set # found chain 2a1rA in template set Warning: unaligning (T0348)H66 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2a1rA)Q375 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKD 2a1rA 76 :YDYTDSKYITKSFNFYVFPKPFNRS T0348 26 :ELICKGDRLAF 2a1rA 105 :KFVCQSSSIDF T0348 37 :PIKDGIP 2a1rA 126 :VFRNGIP T0348 44 :MMLESEARELAPEEEVKLEHHH 2a1rA 337 :IINNTSLAELEKRLKETPFNPP T0348 67 :HH 2a1rA 376 :LH Number of specific fragments extracted= 5 number of extra gaps= 0 total=1061 Number of alignments=347 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)H66 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2a1rA)Q375 T0348 1 :MD 2a1rA 1 :ME T0348 3 :AKFLEI 2a1rA 29 :GEFSGI T0348 9 :LVCPLCK 2a1rA 84 :ITKSFNF T0348 16 :GPLVFDKS 2a1rA 93 :FPKPFNRS T0348 24 :KDELICKGDRLA 2a1rA 103 :DVKFVCQSSSID T0348 36 :FPIKDGIPMM 2a1rA 125 :KVFRNGIPYL T0348 46 :LE 2a1rA 260 :EQ T0348 48 :SEARELAPEEEVKLEHHH 2a1rA 341 :TSLAELEKRLKETPFNPP T0348 67 :HH 2a1rA 376 :LH Number of specific fragments extracted= 9 number of extra gaps= 0 total=1070 Number of alignments=348 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set T0348 22 :KSKDELICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 111 :SSIDFLASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1071 Number of alignments=349 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set T0348 22 :KSKDELICKGDRLAFPIKDGIPMMLESEARE 2a1rA 111 :SSIDFLASQGFDFNKVFRNGIPYLNQEEERQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=1072 Number of alignments=350 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set T0348 1 :MD 2a1rA 1 :ME T0348 4 :KFLEILVCPLCKGPLVFDKS 2a1rA 81 :SKYITKSFNFYVFPKPFNRS T0348 24 :KDELICKGDRLAFPI 2a1rA 103 :DVKFVCQSSSIDFLA T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL T0348 54 :APEEEVKLEHHHHH 2a1rA 263 :ELNDAVGFSRVIHA T0348 68 :H 2a1rA 377 :H Number of specific fragments extracted= 6 number of extra gaps= 0 total=1078 Number of alignments=351 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set T0348 1 :MD 2a1rA 1 :ME T0348 4 :KFLEILVCPLCKGPLVFDKS 2a1rA 81 :SKYITKSFNFYVFPKPFNRS T0348 24 :KDELICKGDRLAFP 2a1rA 103 :DVKFVCQSSSIDFL T0348 38 :IKDGIPMMLESEAREL 2a1rA 127 :FRNGIPYLNQEEERQL T0348 54 :APEE 2a1rA 263 :ELND T0348 58 :EVKLEHHH 2a1rA 351 :KETPFNPP T0348 66 :HHH 2a1rA 377 :HEA Number of specific fragments extracted= 7 number of extra gaps= 0 total=1085 Number of alignments=352 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set T0348 17 :PLVFDKS 2a1rA 94 :PKPFNRS T0348 24 :KDELICKGDRLAFPIKDGI 2a1rA 103 :DVKFVCQSSSIDFLASQGF Number of specific fragments extracted= 2 number of extra gaps= 0 total=1087 Number of alignments=353 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set T0348 16 :GPLVFDKS 2a1rA 93 :FPKPFNRS T0348 24 :KDELICKGDRLAFP 2a1rA 103 :DVKFVCQSSSIDFL T0348 38 :IKDGIPMMLESEAREL 2a1rA 127 :FRNGIPYLNQEEERQL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1090 Number of alignments=354 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 1 :MDAKFLEILVCPL 2a1rA 27 :IDGEFSGISDGPS T0348 14 :CKGPLVFDKSKDELICKGDRLAF 2a1rA 93 :FPKPFNRSSPDVKFVCQSSSIDF T0348 37 :PIKDGIPMMLESEAREL 2a1rA 126 :VFRNGIPYLNQEEERQL T0348 55 :PEEEVKLEHHHHHH 2a1rA 305 :PADLSEFKEMTTCV Number of specific fragments extracted= 4 number of extra gaps= 0 total=1094 Number of alignments=355 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 1 :M 2a1rA 1 :M T0348 2 :DAKFLEILVCP 2a1rA 28 :DGEFSGISDGP T0348 13 :LCKGPLVFDKSKDE 2a1rA 92 :VFPKPFNRSSPDVK T0348 27 :LICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 116 :LASQGFDFNKVFRNGIPYLNQEEERQL T0348 55 :PEEEVKLEHHHHH 2a1rA 279 :NSGKLVIGHNMLL T0348 68 :H 2a1rA 423 :F Number of specific fragments extracted= 6 number of extra gaps= 0 total=1100 Number of alignments=356 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set T0348 22 :KSKDELICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 111 :SSIDFLASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1101 Number of alignments=357 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 110 :SSSIDFLASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1102 Number of alignments=358 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set T0348 23 :SKDELICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 112 :SIDFLASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1103 Number of alignments=359 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 22 :KSKDELICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 111 :SSIDFLASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1104 Number of alignments=360 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDE 2a1rA 8 :FKSNLHKVYQAIEEADFFAIDGEFSG T0348 27 :LICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 116 :LASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1106 Number of alignments=361 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 1 :MDAKFLEILVCP 2a1rA 8 :FKSNLHKVYQAI T0348 14 :C 2a1rA 20 :E T0348 27 :LICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 116 :LASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1109 Number of alignments=362 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)V19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)G46 Warning: unaligning (T0348)D25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2a1rA)G46 Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 1 :M 2a1rA 1 :M T0348 3 :AKFLEIL 2a1rA 13 :HKVYQAI T0348 11 :CPLCKGPL 2a1rA 32 :SGISDGPS T0348 26 :E 2a1rA 47 :F T0348 27 :LICKG 2a1rA 106 :FVCQS T0348 32 :DRLA 2a1rA 119 :QGFD T0348 38 :IKDGIPMMLESEAREL 2a1rA 127 :FRNGIPYLNQEEERQL Number of specific fragments extracted= 7 number of extra gaps= 0 total=1116 Number of alignments=363 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 1 :MD 2a1rA 1 :ME T0348 3 :AKFLEIL 2a1rA 13 :HKVYQAI T0348 11 :CPLCKGP 2a1rA 32 :SGISDGP T0348 18 :LVFDKSKDE 2a1rA 74 :FKYDYTDSK T0348 27 :LI 2a1rA 106 :FV T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 6 number of extra gaps= 0 total=1122 Number of alignments=364 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1123 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 25 :DELICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 114 :DFLASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1124 Number of alignments=365 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1125 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 18 :LVFDKSKDE 2a1rA 74 :FKYDYTDSK T0348 27 :LI 2a1rA 106 :FV T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1128 Number of alignments=366 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)L61 because last residue in template chain is (2a1rA)F423 T0348 1 :MDAKFLEI 2a1rA 1 :MEIIRSNF T0348 15 :KGPLVF 2a1rA 9 :KSNLHK T0348 21 :DKSKDELICKGDRLA 2a1rA 395 :NYLGSFLSPPKIHVS T0348 48 :SEARELAPEEEVK 2a1rA 410 :ARSKLIEPFFNKL Number of specific fragments extracted= 4 number of extra gaps= 0 total=1132 Number of alignments=367 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)H67 because last residue in template chain is (2a1rA)F423 T0348 1 :MDAKFLE 2a1rA 1 :MEIIRSN T0348 14 :CKGPLVF 2a1rA 8 :FKSNLHK T0348 44 :MMLESEARELAPEEEVKLEHHHH 2a1rA 400 :FLSPPKIHVSARSKLIEPFFNKL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1135 Number of alignments=368 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)P43 because last residue in template chain is (2a1rA)F423 T0348 1 :M 2a1rA 1 :M T0348 3 :AKFLE 2a1rA 10 :SNLHK T0348 21 :DKSKDELICKGDRLAFPIKDGI 2a1rA 401 :LSPPKIHVSARSKLIEPFFNKL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1138 Number of alignments=369 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)L18 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)G46 T0348 1 :MD 2a1rA 1 :ME T0348 3 :AKFLEIL 2a1rA 13 :HKVYQAI T0348 11 :CPLCKGP 2a1rA 33 :GISDGPS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1141 Number of alignments=370 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1142 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 27 :LICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 116 :LASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1143 Number of alignments=371 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1144 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1145 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 1 :MD 2a1rA 1 :ME T0348 3 :AKFLEILVCPLCKGPLVFDKS 2a1rA 9 :KSNLHKVYQAIEEADFFAIDG T0348 24 :KDELICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 113 :IDFLASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1148 Number of alignments=372 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 1 :MDAKFLE 2a1rA 1 :MEIIRSN T0348 14 :CKGPLVFDKS 2a1rA 8 :FKSNLHKVYQ T0348 27 :LICKGDRLAFPI 2a1rA 106 :FVCQSSSIDFLA T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 4 number of extra gaps= 0 total=1152 Number of alignments=373 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 1 :M 2a1rA 1 :M T0348 3 :AKFLEIL 2a1rA 10 :SNLHKVY T0348 12 :PLCKGP 2a1rA 33 :GISDGP T0348 19 :VFDKSKDELIC 2a1rA 75 :KYDYTDSKYIT T0348 30 :KGDRLAFPI 2a1rA 100 :SSPDVKFVC T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 6 number of extra gaps= 0 total=1158 Number of alignments=374 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 1 :MD 2a1rA 1 :ME T0348 3 :AKFLEIL 2a1rA 13 :HKVYQAI T0348 11 :CPLCKGP 2a1rA 32 :SGISDGP T0348 18 :LVFDKSKDELIC 2a1rA 74 :FKYDYTDSKYIT T0348 30 :KGDRLAFP 2a1rA 100 :SSPDVKFV T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 6 number of extra gaps= 0 total=1164 Number of alignments=375 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1165 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 26 :ELICKGDRLAFPIKDGIPMMLESEAREL 2a1rA 115 :FLASQGFDFNKVFRNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1166 Number of alignments=376 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1167 # 2a1rA read from 2a1rA/merged-a2m # found chain 2a1rA in template set Warning: unaligning (T0348)A54 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2a1rA)H257 T0348 18 :LVFDKSKDELIC 2a1rA 74 :FKYDYTDSKYIT T0348 30 :KGDRLAFP 2a1rA 100 :SSPDVKFV T0348 39 :KDGIPMMLESEAREL 2a1rA 128 :RNGIPYLNQEEERQL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1170 Number of alignments=377 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1s72Z/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1s72Z/merged-a2m # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1s72Z)S82 T0348 1 :MDAKF 1s72Z 10 :RSGRF T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEAREL 1s72Z 34 :NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKPETPGGKTVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1172 Number of alignments=378 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1s72Z)S82 T0348 1 :MDAKF 1s72Z 10 :RSGRF T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1s72Z 34 :NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 41 :GIPMMLESEARELAPE 1s72Z 66 :GGSYKPETPGGKTVRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1175 Number of alignments=379 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKG 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1176 Number of alignments=380 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELICK 1s72Z 34 :NEDHACPNCGEDRVDRQGTGIWQCS Number of specific fragments extracted= 1 number of extra gaps= 0 total=1177 Number of alignments=381 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1s72Z)S82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 41 :GIPMMLESEARELAPE 1s72Z 66 :GGSYKPETPGGKTVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1179 Number of alignments=382 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :M 1s72Z 10 :R T0348 2 :DAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1s72Z 30 :ESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 41 :GIPMMLESEARELAPE 1s72Z 66 :GGSYKPETPGGKTVRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1182 Number of alignments=383 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKG 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1183 Number of alignments=384 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKG 1s72Z 33 :MNEDHACPNCGEDRVDRQGTGIWQCSY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1184 Number of alignments=385 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 11 :CPLC 1s72Z 39 :CPNC Number of specific fragments extracted= 1 number of extra gaps= 0 total=1185 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 11 :CPLCKGPLVFD 1s72Z 39 :CPNCGEDRVDR Number of specific fragments extracted= 1 number of extra gaps= 0 total=1186 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF T0348 51 :RELAPEEEVKLEHHHHHH 1s72Z 65 :TGGSYKPETPGGKTVRRS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1188 Number of alignments=386 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 48 :SEARELA 1s72Z 67 :GSYKPET T0348 60 :KLEHHHHHH 1s72Z 74 :PGGKTVRRS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1191 Number of alignments=387 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1s72Z)S82 T0348 1 :MDAKF 1s72Z 10 :RSGRF T0348 6 :LEI 1s72Z 27 :AEI T0348 10 :VCPLC 1s72Z 38 :ACPNC T0348 15 :KGPLVFDK 1s72Z 44 :EDRVDRQG T0348 24 :KDELICKGDRLAFP 1s72Z 52 :TGIWQCSYCDYKFT T0348 49 :EARELAPEEEVKLE 1s72Z 68 :SYKPETPGGKTVRR Number of specific fragments extracted= 6 number of extra gaps= 0 total=1197 Number of alignments=388 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1s72Z)S82 T0348 1 :M 1s72Z 10 :R T0348 2 :DAKFLEILV 1s72Z 19 :GRVSRRRVA T0348 11 :CPLC 1s72Z 39 :CPNC T0348 15 :KGPLVFDKS 1s72Z 44 :EDRVDRQGT T0348 25 :DELICKGDRLAFPIKDGIP 1s72Z 53 :GIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKLE 1s72Z 72 :ETPGGKTVRR Number of specific fragments extracted= 6 number of extra gaps= 0 total=1203 Number of alignments=389 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1204 Number of alignments=390 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1s72Z 31 :SEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1205 Number of alignments=391 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 10 :VCPLC 1s72Z 38 :ACPNC T0348 15 :KGPLVFDK 1s72Z 44 :EDRVDRQG T0348 24 :KDELICKGDRLAFP 1s72Z 52 :TGIWQCSYCDYKFT T0348 49 :EARELAPEEEVKLE 1s72Z 68 :SYKPETPGGKTVRR Number of specific fragments extracted= 4 number of extra gaps= 0 total=1209 Number of alignments=392 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 11 :CPLC 1s72Z 39 :CPNC T0348 15 :KGPLVFDKS 1s72Z 44 :EDRVDRQGT T0348 25 :DELICKGDRLAFPIKDGIP 1s72Z 53 :GIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKL 1s72Z 72 :ETPGGKTVR Number of specific fragments extracted= 4 number of extra gaps= 0 total=1213 Number of alignments=393 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF T0348 51 :RELAPEEEVKLEHHHHHH 1s72Z 65 :TGGSYKPETPGGKTVRRS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1215 Number of alignments=394 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 48 :SEARELAP 1s72Z 67 :GSYKPETP T0348 61 :LEHHHHHH 1s72Z 75 :GGKTVRRS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1218 Number of alignments=395 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1s72Z)S82 T0348 1 :M 1s72Z 10 :R T0348 3 :AKFLEILV 1s72Z 20 :RVSRRRVA T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFP 1s72Z 39 :CPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 48 :SEARELAPEEEVKLE 1s72Z 67 :GSYKPETPGGKTVRR Number of specific fragments extracted= 4 number of extra gaps= 0 total=1222 Number of alignments=396 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1s72Z)S82 T0348 1 :M 1s72Z 10 :R T0348 2 :DAKFLEILV 1s72Z 19 :GRVSRRRVA T0348 11 :CPLC 1s72Z 39 :CPNC T0348 15 :KGPLVFD 1s72Z 44 :EDRVDRQ T0348 23 :SKDELICKGDRLAFPIKDGIP 1s72Z 51 :GTGIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKLE 1s72Z 72 :ETPGGKTVRR Number of specific fragments extracted= 6 number of extra gaps= 0 total=1228 Number of alignments=397 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1229 Number of alignments=398 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1s72Z 31 :SEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1230 Number of alignments=399 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1s72Z 33 :MNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 49 :EARELAPEEEVKLE 1s72Z 68 :SYKPETPGGKTVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1232 Number of alignments=400 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 10 :VCPLC 1s72Z 38 :ACPNC T0348 15 :KGPLVFD 1s72Z 44 :EDRVDRQ T0348 23 :SKDELICKGDRLAFPIKDGIP 1s72Z 51 :GTGIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKL 1s72Z 72 :ETPGGKTVR Number of specific fragments extracted= 4 number of extra gaps= 0 total=1236 Number of alignments=401 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF T0348 51 :RELAPEEEVKLEHHHHHH 1s72Z 65 :TGGSYKPETPGGKTVRRS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1238 Number of alignments=402 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 52 :ELAPEEEVKLEHHHHHH 1s72Z 66 :GGSYKPETPGGKTVRRS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1240 Number of alignments=403 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1s72Z)S82 T0348 1 :M 1s72Z 10 :R T0348 2 :DAKFLEI 1s72Z 23 :RRRVAEI T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEAREL 1s72Z 38 :ACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKPETPGGKTVRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1243 Number of alignments=404 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :M 1s72Z 10 :R T0348 2 :DAKFLEI 1s72Z 23 :RRRVAEI T0348 11 :CPLCK 1s72Z 39 :CPNCG T0348 16 :GPLVFDKS 1s72Z 45 :DRVDRQGT T0348 25 :DELICKGDRLAFPIKDGIPM 1s72Z 53 :GIWQCSYCDYKFTGGSYKPE T0348 47 :ESEAREL 1s72Z 73 :TPGGKTV T0348 66 :HHH 1s72Z 80 :RRS Number of specific fragments extracted= 7 number of extra gaps= 0 total=1250 Number of alignments=405 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1s72Z 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1251 Number of alignments=406 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1s72Z 32 :EMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=1252 Number of alignments=407 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1s72Z 38 :ACPNCGEDRVDRQGTGIWQCSYCDYKFT Number of specific fragments extracted= 1 number of extra gaps= 0 total=1253 Number of alignments=408 # 1s72Z read from 1s72Z/merged-a2m # found chain 1s72Z in template set T0348 11 :CPLCK 1s72Z 39 :CPNCG T0348 16 :GPLVFDKS 1s72Z 45 :DRVDRQGT T0348 25 :DELICKGDRLAFPIKD 1s72Z 53 :GIWQCSYCDYKFTGGS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1256 Number of alignments=409 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ee8A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1ee8A/merged-a2m # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MDAKFLEILVCPL 1ee8A 1 :PELPEVETTRRRL T0348 16 :GPLVFDK 1ee8A 14 :RPLVLGQ T0348 23 :SKDELICKGDRLAFPI 1ee8A 82 :TRAALVLEGRTLYFHD T0348 39 :K 1ee8A 108 :R T0348 40 :DGIPMMLE 1ee8A 113 :REIPLLLR T0348 48 :SEARELAPEEEVKLEH 1ee8A 177 :RPARSLTEEEARRLYR T0348 64 :HHHHH 1ee8A 262 :QGEGP Number of specific fragments extracted= 7 number of extra gaps= 0 total=1263 Number of alignments=410 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 11 :CPLCKGPL 1ee8A 238 :CPACGRPV Number of specific fragments extracted= 1 number of extra gaps= 0 total=1264 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MDAKFLE 1ee8A 70 :MTGGFRL T0348 12 :PLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESE 1ee8A 77 :EPTPHTRAALVLEGRTLYFHDPRRFGRLFGVRRGDYRE T0348 50 :ARELAPEEEVKLEHHHHHH 1ee8A 179 :ARSLTEEEARRLYRALREV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1267 Number of alignments=411 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 3 :AKFLEILV 1ee8A 51 :GKFLLFAL T0348 12 :PLCKGPLVF 1ee8A 68 :LGMTGGFRL T0348 27 :LICKGDRLAFPIKDG 1ee8A 77 :EPTPHTRAALVLEGR T0348 42 :IPMML 1ee8A 101 :FGRLF T0348 47 :ESEARELAPEEEVKLEH 1ee8A 176 :FRPARSLTEEEARRLYR T0348 64 :HHH 1ee8A 227 :RHA T0348 67 :HH 1ee8A 265 :GP Number of specific fragments extracted= 7 number of extra gaps= 0 total=1274 Number of alignments=412 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 11 :CPLCKGPLVFDKSKD 1ee8A 238 :CPACGRPVERRVVAG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1275 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 11 :CPLCKGPLVFDKSK 1ee8A 238 :CPACGRPVERRVVA Number of specific fragments extracted= 1 number of extra gaps= 0 total=1276 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 3 :AKFL 1ee8A 51 :GKFL T0348 7 :EILVCPLCKGPLVF 1ee8A 63 :ELVAHLGMTGGFRL T0348 27 :LICKGDRLAFPIKDG 1ee8A 77 :EPTPHTRAALVLEGR T0348 44 :MMLESEARELAPEEEVKLEHHHHHH 1ee8A 92 :TLYFHDPRRFGRLFGVRRGDYREIP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1280 Number of alignments=413 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 3 :AKFLEILV 1ee8A 51 :GKFLLFAL T0348 11 :CPLCKGPLVF 1ee8A 67 :HLGMTGGFRL T0348 27 :LICKGDRLAFPIKDGIPMMLES 1ee8A 77 :EPTPHTRAALVLEGRTLYFHDP T0348 49 :EARELAPE 1ee8A 117 :LLLRLGPE T0348 57 :EEVKL 1ee8A 186 :EARRL T0348 62 :EHHHHHH 1ee8A 225 :QTRHAVY Number of specific fragments extracted= 6 number of extra gaps= 0 total=1286 Number of alignments=414 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 11 :CPLCKGPLVFDKSKDELIC 1ee8A 238 :CPACGRPVERRVVAGRGTH Number of specific fragments extracted= 1 number of extra gaps= 0 total=1287 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 15 :KGPLVF 1ee8A 71 :TGGFRL T0348 27 :LICKGDRLAFPIKDG 1ee8A 77 :EPTPHTRAALVLEGR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1289 Number of alignments=415 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MDAKFLEILVCPLCKGPLVF 1ee8A 107 :VRRGDYREIPLLLRLGPEPL T0348 21 :DKSKDELICKGDRLAFPIKDGI 1ee8A 129 :AFAFPGFFRGLKESARPLKALL T0348 43 :PMMLESEARELAPEEEVKLEHHHHHH 1ee8A 172 :RLSPFRPARSLTEEEARRLYRALREV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1292 Number of alignments=416 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MDAKFLEILV 1ee8A 18 :LGQTLRQVVH T0348 11 :CPLCKGPLVF 1ee8A 67 :HLGMTGGFRL T0348 21 :DKSKDELICKGDRLAFPIKDGI 1ee8A 129 :AFAFPGFFRGLKESARPLKALL T0348 43 :PMMLESEARELAPEEEVKLEHHH 1ee8A 172 :RLSPFRPARSLTEEEARRLYRAL T0348 66 :HHH 1ee8A 227 :RHA Number of specific fragments extracted= 5 number of extra gaps= 0 total=1297 Number of alignments=417 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 11 :CPLCKGPLVFDK 1ee8A 238 :CPACGRPVERRV Number of specific fragments extracted= 1 number of extra gaps= 0 total=1298 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 11 :CPLCKGPLVFDKS 1ee8A 238 :CPACGRPVERRVV Number of specific fragments extracted= 1 number of extra gaps= 0 total=1299 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 7 :EILVCPLCKGPL 1ee8A 234 :EGLPCPACGRPV Number of specific fragments extracted= 1 number of extra gaps= 0 total=1300 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 9 :LVCPLCKGP 1ee8A 236 :LPCPACGRP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1301 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDE 1ee8A 8 :TTRRRLRPLVLGQTLRQVVHRDPARY T0348 27 :LICKGDRLA 1ee8A 236 :LPCPACGRP T0348 47 :ESEARELAPEEEVKLEHHHHHH 1ee8A 245 :VERRVVAGRGTHFCPTCQGEGP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1304 Number of alignments=418 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDE 1ee8A 8 :TTRRRLRPLVLGQTLRQVVHRDPARY T0348 27 :LICKGDRLA 1ee8A 236 :LPCPACGRP T0348 47 :ESEARELAPEEEVKLEHHHHHH 1ee8A 245 :VERRVVAGRGTHFCPTCQGEGP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1307 Number of alignments=419 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 3 :AKFLEILVCPLCKGPLVFDKSK 1ee8A 10 :RRRLRPLVLGQTLRQVVHRDPA T0348 26 :E 1ee8A 32 :R T0348 30 :KGDRLAFPIKDG 1ee8A 99 :RRFGRLFGVRRG T0348 42 :IPMMLE 1ee8A 115 :IPLLLR T0348 50 :ARELAPEEEVKLEHHHHH 1ee8A 127 :SEAFAFPGFFRGLKESAR Number of specific fragments extracted= 5 number of extra gaps= 0 total=1312 Number of alignments=420 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MD 1ee8A 1 :PE T0348 3 :AKFLEILV 1ee8A 11 :RRLRPLVL T0348 11 :CPLC 1ee8A 29 :DPAR T0348 15 :KG 1ee8A 40 :EG T0348 17 :PLVFDK 1ee8A 46 :EVDRRG T0348 23 :SKDE 1ee8A 59 :EGGV T0348 27 :LICKGDRLAFPIKDGIPMM 1ee8A 86 :LVLEGRTLYFHDPRRFGRL T0348 52 :ELAPEEEVKLEHHHHH 1ee8A 129 :AFAFPGFFRGLKESAR Number of specific fragments extracted= 8 number of extra gaps= 0 total=1320 Number of alignments=421 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 7 :EILVCPLCKGPLV 1ee8A 234 :EGLPCPACGRPVE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1321 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 7 :EILVCPLCKGPLVF 1ee8A 234 :EGLPCPACGRPVER Number of specific fragments extracted= 1 number of extra gaps= 0 total=1322 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 9 :LVCPLCKGPLVF 1ee8A 236 :LPCPACGRPVER T0348 21 :DKSKDELICKGDR 1ee8A 250 :VAGRGTHFCPTCQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=1324 Number of alignments=422 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 10 :VCPLCKGPLVFDK 1ee8A 237 :PCPACGRPVERRV T0348 23 :SKDE 1ee8A 251 :AGRG T0348 27 :LICKGD 1ee8A 256 :HFCPTC Number of specific fragments extracted= 3 number of extra gaps= 0 total=1327 Number of alignments=423 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MDAKFLEILVCPLCKGPLVF 1ee8A 8 :TTRRRLRPLVLGQTLRQVVH T0348 21 :DKSKDELICKGDRLA 1ee8A 230 :VYGREGLPCPACGRP T0348 47 :ESEARELAPEEEVKLEHHHHHH 1ee8A 245 :VERRVVAGRGTHFCPTCQGEGP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1330 Number of alignments=424 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MDAKFLEILVCPLCKGP 1ee8A 8 :TTRRRLRPLVLGQTLRQ T0348 21 :DKSKDELICKGDRLA 1ee8A 230 :VYGREGLPCPACGRP T0348 47 :ESEARELAPEEEVKLEHHHHHH 1ee8A 245 :VERRVVAGRGTHFCPTCQGEGP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1333 Number of alignments=425 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 3 :AKFLEILVCPLCKGPLVF 1ee8A 10 :RRRLRPLVLGQTLRQVVH T0348 24 :KDELICKGDRLAF 1ee8A 233 :REGLPCPACGRPV T0348 37 :PIKDGIP 1ee8A 248 :RVVAGRG Number of specific fragments extracted= 3 number of extra gaps= 0 total=1336 Number of alignments=426 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MD 1ee8A 1 :PE T0348 3 :AKFLEIL 1ee8A 11 :RRLRPLV T0348 14 :CKGPL 1ee8A 18 :LGQTL T0348 19 :VF 1ee8A 24 :QV T0348 31 :GDRLAFPIKDGIPMMLESEAR 1ee8A 209 :LSDQSYRQPDGLPGGFQTRHA T0348 52 :ELA 1ee8A 237 :PCP T0348 55 :PEEEVKLEHHHHH 1ee8A 241 :CGRPVERRVVAGR Number of specific fragments extracted= 7 number of extra gaps= 0 total=1343 Number of alignments=427 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 7 :EILVCPLCKGPLV 1ee8A 234 :EGLPCPACGRPVE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1344 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 7 :EILVCPLCKGPLVFDK 1ee8A 234 :EGLPCPACGRPVERRV Number of specific fragments extracted= 1 number of extra gaps= 0 total=1345 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 9 :LVCPLCKGPLVFDKSKD 1ee8A 236 :LPCPACGRPVERRVVAG T0348 26 :ELICKGDR 1ee8A 255 :THFCPTCQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=1347 Number of alignments=428 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 11 :CPLCKGPLVFDKSKD 1ee8A 238 :CPACGRPVERRVVAG T0348 26 :ELICKGD 1ee8A 255 :THFCPTC Number of specific fragments extracted= 2 number of extra gaps= 0 total=1349 Number of alignments=429 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set Warning: unaligning (T0348)A3 because first residue in template chain is (1ee8A)P1 T0348 4 :KFLEILVCPLCKGPLVFDKS 1ee8A 2 :ELPEVETTRRRLRPLVLGQT T0348 24 :KDELICK 1ee8A 90 :GRTLYFH T0348 31 :GDRLAFPIKDG 1ee8A 100 :RFGRLFGVRRG T0348 42 :IPMMLESEARELAPEEEVKLEHHHHHH 1ee8A 115 :IPLLLRLGPEPLSEAFAFPGFFRGLKE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1353 Number of alignments=430 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set Warning: unaligning (T0348)A3 because first residue in template chain is (1ee8A)P1 T0348 4 :KFLEILVCPLCKGPLVFDKS 1ee8A 2 :ELPEVETTRRRLRPLVLGQT Number of specific fragments extracted= 1 number of extra gaps= 0 total=1354 Number of alignments=431 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 3 :AKFLEILVCPLCKGPLVFDKS 1ee8A 10 :RRRLRPLVLGQTLRQVVHRDP T0348 24 :KDE 1ee8A 90 :GRT T0348 27 :LICKG 1ee8A 95 :FHDPR T0348 32 :DRLAFPIKDG 1ee8A 101 :FGRLFGVRRG T0348 42 :IPMMLE 1ee8A 115 :IPLLLR Number of specific fragments extracted= 5 number of extra gaps= 0 total=1359 Number of alignments=432 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 1 :MD 1ee8A 1 :PE T0348 3 :AKFLEIL 1ee8A 11 :RRLRPLV T0348 11 :CPLCKGPLVFDKSKDELICKGDR 1ee8A 79 :TPHTRAALVLEGRTLYFHDPRRF T0348 34 :LAFPIKDG 1ee8A 103 :RLFGVRRG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1363 Number of alignments=433 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 7 :EILVCPLCKGPLV 1ee8A 234 :EGLPCPACGRPVE Number of specific fragments extracted= 1 number of extra gaps= 0 total=1364 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 7 :EILVCPLCKGPLVF 1ee8A 234 :EGLPCPACGRPVER Number of specific fragments extracted= 1 number of extra gaps= 0 total=1365 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 9 :LVCPLCKGPLVF 1ee8A 236 :LPCPACGRPVER T0348 21 :DKSKDELICKGDR 1ee8A 250 :VAGRGTHFCPTCQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=1367 Number of alignments=434 # 1ee8A read from 1ee8A/merged-a2m # found chain 1ee8A in template set T0348 11 :CPLCKGPLVFDK 1ee8A 238 :CPACGRPVERRV T0348 23 :SKDELICKGD 1ee8A 252 :GRGTHFCPTC Number of specific fragments extracted= 2 number of extra gaps= 0 total=1369 Number of alignments=435 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vckA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vckA/merged-a2m # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 2 :DAKFLEILVCPLCKGPLVFDKSKDE 1vckA 37 :DQFYATEDTCTHGIASLSEGTLDGD T0348 27 :LICKGDRLAFPIKDG 1vckA 63 :IECPFHGGAFNVCTG T0348 42 :IPMMLESEARELAPEEEVKLEHHHH 1vckA 82 :SPCTVPLGVFEVEVKEGEVYVAGEK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1372 Number of alignments=436 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 4 :K 1vckA 20 :R T0348 5 :FLEILVCPLCKGPLVFDKSK 1vckA 40 :YATEDTCTHGIASLSEGTLD T0348 25 :DELICKGDRLAFPIKDGI 1vckA 61 :DVIECPFHGGAFNVCTGM T0348 43 :PMML 1vckA 83 :PCTV T0348 48 :SEARELAPE 1vckA 88 :LGVFEVEVK T0348 58 :EVKLEHHHH 1vckA 97 :EGEVYVAGE Number of specific fragments extracted= 6 number of extra gaps= 0 total=1378 Number of alignments=437 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 11 :CPLCKGPL 1vckA 51 :ASLSEGTL T0348 23 :SKDELICKGDRLAFPIKDG 1vckA 59 :DGDVIECPFHGGAFNVCTG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1380 Number of alignments=438 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 10 :VCPLCKGPLVFDKSK 1vckA 45 :TCTHGIASLSEGTLD T0348 25 :DELICKGDRLAFPIKDGIPM 1vckA 61 :DVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1382 Number of alignments=439 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)H67 because last residue in template chain is (1vckA)K107 T0348 2 :DAKFLEIL 1vckA 16 :PGTIRRVN T0348 10 :VCPLCKGPLVFDK 1vckA 45 :TCTHGIASLSEGT T0348 23 :SKDELICKGDRLAFPIKDG 1vckA 59 :DGDVIECPFHGGAFNVCTG T0348 42 :IPMMLESEARELAPEEEVKLEHHHH 1vckA 82 :SPCTVPLGVFEVEVKEGEVYVAGEK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1386 Number of alignments=440 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 4 :KFLEI 1vckA 18 :TIRRV T0348 9 :LVCPLCKGPLVFDK 1vckA 44 :DTCTHGIASLSEGT T0348 23 :SKDELICKGDRLAFPIKDGIPMMLESEAR 1vckA 59 :DGDVIECPFHGGAFNVCTGMPASSPCTVP T0348 53 :LAPEE 1vckA 89 :GVFEV T0348 58 :EVKLEHH 1vckA 99 :EVYVAGE Number of specific fragments extracted= 5 number of extra gaps= 0 total=1391 Number of alignments=441 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 10 :VCPLCKGPLVFDK 1vckA 45 :TCTHGIASLSEGT T0348 23 :SKDELICKGDRLAFPIKDG 1vckA 59 :DGDVIECPFHGGAFNVCTG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1393 Number of alignments=442 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 10 :VCPLCKGPLVFDK 1vckA 45 :TCTHGIASLSEGT T0348 23 :SKDELICKGDRLAFPIKDGIPMMLESE 1vckA 59 :DGDVIECPFHGGAFNVCTGMPASSPCT Number of specific fragments extracted= 2 number of extra gaps= 0 total=1395 Number of alignments=443 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 1 :MDAKFLEIL 1vckA 15 :QPGTIRRVN T0348 10 :VCPLCKGPLVFDK 1vckA 45 :TCTHGIASLSEGT T0348 23 :SKDELICKGDRLAFPIKDGIPMMLESEA 1vckA 59 :DGDVIECPFHGGAFNVCTGMPASSPCTV T0348 53 :LAPEEEVKLEHHHHHH 1vckA 87 :PLGVFEVEVKEGEVYV Number of specific fragments extracted= 4 number of extra gaps= 0 total=1399 Number of alignments=444 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 1 :MDAKFLE 1vckA 15 :QPGTIRR T0348 8 :ILVCPLCKGPLVFDK 1vckA 43 :EDTCTHGIASLSEGT T0348 23 :SKDELICKGDRLAFPIKDGIPMMLESEA 1vckA 59 :DGDVIECPFHGGAFNVCTGMPASSPCTV T0348 55 :PEEEVKLEH 1vckA 89 :GVFEVEVKE T0348 64 :HHHHH 1vckA 103 :AGEKK Number of specific fragments extracted= 5 number of extra gaps= 0 total=1404 Number of alignments=445 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 10 :VCPLCKGPLVFDK 1vckA 45 :TCTHGIASLSEGT T0348 23 :SKDELICKGDRLAFPIKDGIPM 1vckA 59 :DGDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1406 Number of alignments=446 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 10 :VCPLCKGPLVFDK 1vckA 45 :TCTHGIASLSEGT T0348 23 :SKDELICKGDRLAFPIKDGIPMMLE 1vckA 59 :DGDVIECPFHGGAFNVCTGMPASSP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1408 Number of alignments=447 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K60 because last residue in template chain is (1vckA)K107 T0348 46 :LESEARELAPEEEV 1vckA 93 :VEVKEGEVYVAGEK Number of specific fragments extracted= 1 number of extra gaps= 0 total=1409 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K60 because last residue in template chain is (1vckA)K107 T0348 10 :VCPLCKGPL 1vckA 64 :ECPFHGGAF T0348 27 :LICKGDRLAFPIKDGIP 1vckA 73 :NVCTGMPASSPCTVPLG T0348 44 :MMLESEARELAPEEEV 1vckA 91 :FEVEVKEGEVYVAGEK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1412 Number of alignments=448 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1vckA)I4 Warning: unaligning (T0348)V59 because last residue in template chain is (1vckA)K107 T0348 5 :FLEILVC 1vckA 5 :WLKVCAA T0348 12 :PLCKGPLVFDKSKDE 1vckA 16 :PGTIRRVNRVGAAPL T0348 27 :LICKGDRLAFPIKDGIPM 1vckA 63 :IECPFHGGAFNVCTGMPA T0348 45 :MLESEARELAPEEE 1vckA 93 :VEVKEGEVYVAGEK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1416 Number of alignments=449 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1vckA)I4 Warning: unaligning (T0348)K60 because last residue in template chain is (1vckA)K107 T0348 5 :FLEILVCPLC 1vckA 5 :WLKVCAASDM T0348 15 :KGPLVFDKSKDE 1vckA 16 :PGTIRRVNRVGA T0348 27 :LICKGDRLAFPIKDGIPM 1vckA 63 :IECPFHGGAFNVCTGMPA T0348 45 :MLESEARELAPEEE 1vckA 93 :VEVKEGEVYVAGEK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1420 Number of alignments=450 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K60 because last residue in template chain is (1vckA)K107 T0348 10 :VCPLC 1vckA 8 :VCAAS T0348 15 :KGPLVFDKSKDE 1vckA 16 :PGTIRRVNRVGA T0348 27 :LICKGDRLAFPIKDGIPM 1vckA 63 :IECPFHGGAFNVCTGMPA T0348 45 :MLESEA 1vckA 93 :VEVKEG T0348 58 :EV 1vckA 105 :EK Number of specific fragments extracted= 5 number of extra gaps= 0 total=1425 Number of alignments=451 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K60 because last residue in template chain is (1vckA)K107 T0348 11 :CPLC 1vckA 9 :CAAS T0348 15 :KGPLVFDK 1vckA 16 :PGTIRRVN T0348 23 :SKDELICKGDRLAFPIKDGIPM 1vckA 59 :DGDVIECPFHGGAFNVCTGMPA T0348 52 :ELA 1vckA 90 :VFE T0348 58 :EV 1vckA 105 :EK Number of specific fragments extracted= 5 number of extra gaps= 0 total=1430 Number of alignments=452 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 23 :SKDELICKGDRLAFPIKDGIP 1vckA 59 :DGDVIECPFHGGAFNVCTGMP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1431 Number of alignments=453 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 23 :SKDELICKGDRLAFPIKDGIPM 1vckA 59 :DGDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 1 number of extra gaps= 0 total=1432 Number of alignments=454 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 14 :CKGPL 1vckA 54 :SEGTL T0348 23 :SKDELICKGDRLAFPIKDGIPM 1vckA 59 :DGDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1434 Number of alignments=455 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 23 :SKDELICKGDRLAFPIKDGIPM 1vckA 59 :DGDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 1 number of extra gaps= 0 total=1435 Number of alignments=456 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1vckA)I4 Warning: unaligning (T0348)V59 because last residue in template chain is (1vckA)K107 T0348 5 :FLEILVCPLCKGPLVF 1vckA 5 :WLKVCAASDMQPGTIR T0348 21 :DKSKDELICKGDRLAFPIKDGIPM 1vckA 57 :TLDGDVIECPFHGGAFNVCTGMPA T0348 45 :MLESEARELAPEEE 1vckA 93 :VEVKEGEVYVAGEK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1438 Number of alignments=457 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1vckA)I4 Warning: unaligning (T0348)V59 because last residue in template chain is (1vckA)K107 T0348 5 :FLEILVCPLC 1vckA 5 :WLKVCAASDM T0348 15 :KGPLVF 1vckA 16 :PGTIRR T0348 21 :DKSKDELICKGDRLAFPIKDGIPM 1vckA 57 :TLDGDVIECPFHGGAFNVCTGMPA T0348 45 :MLESEARELAPEEE 1vckA 93 :VEVKEGEVYVAGEK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1442 Number of alignments=458 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1vckA)I4 Warning: unaligning (T0348)K60 because last residue in template chain is (1vckA)K107 T0348 5 :FLE 1vckA 5 :WLK T0348 10 :VCPLC 1vckA 8 :VCAAS T0348 15 :KGPLVF 1vckA 16 :PGTIRR T0348 21 :DKSKDELICKGDRLAFPIKDGIPM 1vckA 57 :TLDGDVIECPFHGGAFNVCTGMPA T0348 49 :EARE 1vckA 92 :EVEV T0348 54 :APE 1vckA 96 :KEG T0348 57 :EEV 1vckA 104 :GEK Number of specific fragments extracted= 7 number of extra gaps= 0 total=1449 Number of alignments=459 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K60 because last residue in template chain is (1vckA)K107 T0348 17 :PLVF 1vckA 7 :KVCA T0348 21 :DKSKDELICKGDRLAFPIKDGIPM 1vckA 57 :TLDGDVIECPFHGGAFNVCTGMPA T0348 50 :ARELA 1vckA 88 :LGVFE T0348 55 :PE 1vckA 97 :EG T0348 57 :EEV 1vckA 104 :GEK Number of specific fragments extracted= 5 number of extra gaps= 0 total=1454 Number of alignments=460 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 23 :SKDELICKGDRLAFPIKDGIP 1vckA 59 :DGDVIECPFHGGAFNVCTGMP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1455 Number of alignments=461 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 22 :KSKDELICKGDRLAFPIKDGIPM 1vckA 58 :LDGDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 1 number of extra gaps= 0 total=1456 Number of alignments=462 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 21 :DKSKDELICKGDRLAFPIKDGIPM 1vckA 57 :TLDGDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 1 number of extra gaps= 0 total=1457 Number of alignments=463 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 21 :DKSKDELICKGDRLAFPIKDGIPM 1vckA 57 :TLDGDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 1 number of extra gaps= 0 total=1458 Number of alignments=464 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1vckA)I4 Warning: unaligning (T0348)V59 because last residue in template chain is (1vckA)K107 T0348 5 :FLEILVCPLCKGPLVFDKS 1vckA 5 :WLKVCAASDMQPGTIRRVN T0348 24 :KDELICKGDRLAFPIKDGIPM 1vckA 60 :GDVIECPFHGGAFNVCTGMPA T0348 45 :MLESEARELAPEEE 1vckA 93 :VEVKEGEVYVAGEK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1461 Number of alignments=465 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K4 because first residue in template chain is (1vckA)I4 Warning: unaligning (T0348)K60 because last residue in template chain is (1vckA)K107 T0348 5 :FLEILVCPLCK 1vckA 5 :WLKVCAASDMQ T0348 16 :GPLVFDK 1vckA 17 :GTIRRVN T0348 24 :KDELICKGDRLAFPIKDGIPM 1vckA 60 :GDVIECPFHGGAFNVCTGMPA T0348 45 :MLESEARELAPEE 1vckA 93 :VEVKEGEVYVAGE T0348 59 :V 1vckA 106 :K Number of specific fragments extracted= 5 number of extra gaps= 0 total=1466 Number of alignments=466 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K60 because last residue in template chain is (1vckA)K107 T0348 10 :VCPLCK 1vckA 8 :VCAASD T0348 16 :GPLVF 1vckA 17 :GTIRR T0348 21 :DK 1vckA 24 :RV T0348 24 :KDELICKGDRLAFPIKDGIPM 1vckA 60 :GDVIECPFHGGAFNVCTGMPA T0348 54 :APEE 1vckA 96 :KEGE T0348 58 :EV 1vckA 105 :EK Number of specific fragments extracted= 6 number of extra gaps= 0 total=1472 Number of alignments=467 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set Warning: unaligning (T0348)K60 because last residue in template chain is (1vckA)K107 T0348 11 :CPLCK 1vckA 9 :CAASD T0348 16 :GPLVFDK 1vckA 17 :GTIRRVN T0348 24 :KDELICKGDRLAFPIKDGIPM 1vckA 60 :GDVIECPFHGGAFNVCTGMPA T0348 55 :PE 1vckA 97 :EG T0348 58 :EV 1vckA 105 :EK Number of specific fragments extracted= 5 number of extra gaps= 0 total=1477 Number of alignments=468 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 23 :SKDELICKGDRLAFPIKDGIP 1vckA 59 :DGDVIECPFHGGAFNVCTGMP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1478 Number of alignments=469 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 23 :SKDELICKGDRLAFPIKDGIP 1vckA 59 :DGDVIECPFHGGAFNVCTGMP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1479 Number of alignments=470 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 14 :CKGPLV 1vckA 54 :SEGTLD T0348 24 :KDELICKGDRLAFPIKDGIPM 1vckA 60 :GDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1481 Number of alignments=471 # 1vckA read from 1vckA/merged-a2m # found chain 1vckA in template set T0348 13 :LCKGPLV 1vckA 53 :LSEGTLD T0348 24 :KDELICKGDRLAFPIKDGIPM 1vckA 60 :GDVIECPFHGGAFNVCTGMPA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1483 Number of alignments=472 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ypvA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1ypvA/merged-a2m # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)C14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 Warning: unaligning (T0348)E52 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)D130 Warning: unaligning (T0348)L53 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)D130 T0348 2 :DAKFLEILVCPL 1ypvA 30 :ELQYLGQIQHIL T0348 17 :PLVFDKSKDELICKGDRLAFPIKDGIPMMLESEAR 1ypvA 72 :PLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGV T0348 54 :APEEEVKLEHHHHHH 1ypvA 131 :LGPVYGFQWRHFGAE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1486 Number of alignments=473 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)C14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 T0348 2 :DAKFLEILVCPL 1ypvA 30 :ELQYLGQIQHIL T0348 17 :PLVFDKSKDE 1ypvA 45 :VRKDDRTGTG T0348 27 :LICKGDRLAFPIKDGIPM 1ypvA 56 :LSVFGMQARYSLRDEFPL T0348 45 :MLESEARELAPE 1ypvA 92 :IKGSTNAKELSS T0348 57 :EEVKLEHHHHHH 1ypvA 294 :EDFQIEGYNPHP Number of specific fragments extracted= 5 number of extra gaps= 0 total=1491 Number of alignments=474 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)K15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)H196 Warning: unaligning (T0348)P17 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)Q200 Warning: unaligning (T0348)V19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)Q200 T0348 16 :G 1ypvA 197 :A T0348 20 :FDKSKDELIC 1ypvA 201 :FYVVNSELSC Number of specific fragments extracted= 2 number of extra gaps= 0 total=1493 Number of alignments=475 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)C14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 T0348 12 :PL 1ypvA 40 :IL T0348 17 :PLVFDKSK 1ypvA 45 :VRKDDRTG T0348 25 :DELICKGDRLAFPIKDGIPMM 1ypvA 54 :GTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1496 Number of alignments=476 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)C14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 Warning: unaligning (T0348)R51 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)D130 Warning: unaligning (T0348)E52 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)D130 T0348 2 :DAKFLEILVCPL 1ypvA 30 :ELQYLGQIQHIL T0348 17 :PLVFDKSKDELICKGDRLAFPI 1ypvA 62 :QARYSLRDEFPLLTTKRVFWKG T0348 39 :KDGIPMMLESEA 1ypvA 95 :STNAKELSSKGV T0348 53 :LAPEEEVKLEHHHHH 1ypvA 131 :LGPVYGFQWRHFGAE T0348 68 :H 1ypvA 158 :V Number of specific fragments extracted= 5 number of extra gaps= 0 total=1501 Number of alignments=477 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)C14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 Warning: unaligning (T0348)R51 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)D130 Warning: unaligning (T0348)E52 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)D130 T0348 2 :DAKFLEILVCPL 1ypvA 30 :ELQYLGQIQHIL T0348 17 :PL 1ypvA 45 :VR T0348 19 :VFDKSKDELICKGDRLAFPI 1ypvA 64 :RYSLRDEFPLLTTKRVFWKG T0348 39 :KDGIPMMLESEA 1ypvA 95 :STNAKELSSKGV T0348 53 :LAPEEEVKLEHHHHH 1ypvA 131 :LGPVYGFQWRHFGAE T0348 68 :H 1ypvA 305 :P Number of specific fragments extracted= 6 number of extra gaps= 0 total=1507 Number of alignments=478 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)L13 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)H196 Warning: unaligning (T0348)K15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)H196 Warning: unaligning (T0348)P17 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)Q200 Warning: unaligning (T0348)V19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)Q200 T0348 2 :DAKFLEILVCP 1ypvA 183 :NPRDLPLMALP T0348 16 :G 1ypvA 197 :A T0348 20 :FDKSKDELIC 1ypvA 201 :FYVVNSELSC Number of specific fragments extracted= 3 number of extra gaps= 0 total=1510 Number of alignments=479 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1510 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)L13 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)H196 Warning: unaligning (T0348)K15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)H196 Warning: unaligning (T0348)P17 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)Q200 Warning: unaligning (T0348)V19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)Q200 T0348 1 :MDAKFLEILVCP 1ypvA 182 :WNPRDLPLMALP T0348 16 :G 1ypvA 197 :A T0348 20 :FDKSKDELICKGDRLAFPIKDGIPMMLES 1ypvA 201 :FYVVNSELSCQLYQRSGDMGLGVPFNIAS T0348 49 :EARELAPEEEVKLEHHHHHH 1ypvA 286 :EKIDDFKAEDFQIEGYNPHP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1514 Number of alignments=480 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)C14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 T0348 1 :MDAKFLEILVCPL 1ypvA 29 :GELQYLGQIQHIL T0348 17 :PLVFDK 1ypvA 45 :VRKDDR T0348 23 :SKDELICKGDR 1ypvA 68 :RDEFPLLTTKR T0348 34 :LA 1ypvA 89 :LW T0348 36 :FP 1ypvA 142 :FG T0348 38 :I 1ypvA 225 :F T0348 39 :K 1ypvA 259 :L T0348 40 :DGIPMMLESEAREL 1ypvA 263 :EPLKIQLQREPRPF T0348 54 :APEEEVKLEHHHHHH 1ypvA 291 :FKAEDFQIEGYNPHP Number of specific fragments extracted= 9 number of extra gaps= 0 total=1523 Number of alignments=481 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)L13 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)H196 Warning: unaligning (T0348)K15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)H196 Warning: unaligning (T0348)P17 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)Q200 Warning: unaligning (T0348)V19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)Q200 T0348 2 :DAKFLEILVCP 1ypvA 183 :NPRDLPLMALP T0348 16 :G 1ypvA 197 :A T0348 20 :FDKSKDELIC 1ypvA 201 :FYVVNSELSC Number of specific fragments extracted= 3 number of extra gaps= 0 total=1526 Number of alignments=482 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=1526 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)L13 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)H196 Warning: unaligning (T0348)K15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)H196 Warning: unaligning (T0348)P17 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)Q200 Warning: unaligning (T0348)V19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)Q200 T0348 6 :LEILVCP 1ypvA 187 :LPLMALP T0348 16 :G 1ypvA 197 :A T0348 20 :FDKSKDELICKGDRLAFPIKDGIPMMLESEA 1ypvA 201 :FYVVNSELSCQLYQRSGDMGLGVPFNIASYA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1529 Number of alignments=483 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)L13 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)H196 Warning: unaligning (T0348)K15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)H196 Warning: unaligning (T0348)P17 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)Q200 Warning: unaligning (T0348)V19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)Q200 T0348 6 :LEILVCP 1ypvA 187 :LPLMALP T0348 16 :G 1ypvA 197 :A T0348 20 :FDKSKDELICKGDRLAFPIKDGIPMMLES 1ypvA 201 :FYVVNSELSCQLYQRSGDMGLGVPFNIAS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1532 Number of alignments=484 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)E26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)P26 T0348 27 :LICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1ypvA 56 :LSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1533 Number of alignments=485 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set T0348 15 :KGPLVFDKS 1ypvA 28 :HGELQYLGQ T0348 27 :LICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 1ypvA 56 :LSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGST Number of specific fragments extracted= 2 number of extra gaps= 0 total=1535 Number of alignments=486 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 Warning: unaligning (T0348)H64 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)D130 T0348 5 :FLEIL 1ypvA 37 :IQHIL T0348 13 :LCKGP 1ypvA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLL T0348 53 :LAPEEEVKLEH 1ypvA 96 :TNAKELSSKGV Number of specific fragments extracted= 4 number of extra gaps= 0 total=1539 Number of alignments=487 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)H64 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)D130 T0348 27 :LICKGDRLAFPIKDGIPMM 1ypvA 56 :LSVFGMQARYSLRDEFPLL T0348 52 :ELAPEEEVKLEH 1ypvA 95 :STNAKELSSKGV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1541 Number of alignments=488 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 T0348 3 :AKFLEIL 1ypvA 35 :GQIQHIL T0348 13 :LCKGP 1ypvA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1544 Number of alignments=489 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 T0348 6 :LEIL 1ypvA 38 :QHIL T0348 13 :LCKGPL 1ypvA 45 :VRKDDR T0348 22 :KSKDELICKGDRLAFPIKDGIPMMLESEAR 1ypvA 51 :TGTGTLSVFGMQARYSLRDEFPLLTTKRVF Number of specific fragments extracted= 3 number of extra gaps= 0 total=1547 Number of alignments=490 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 T0348 5 :FLEIL 1ypvA 37 :IQHIL T0348 13 :LCKGP 1ypvA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1550 Number of alignments=491 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1551 Number of alignments=492 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)H67 because last residue in template chain is (1ypvA)E310 T0348 21 :DKSKDELICKGDRLAFP 1ypvA 261 :HIEPLKIQLQREPRPFP T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHH 1ypvA 281 :ILRKVEKIDDFKAEDFQIEGYNPHPTIKM Number of specific fragments extracted= 2 number of extra gaps= 0 total=1553 Number of alignments=493 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)H65 because last residue in template chain is (1ypvA)E310 T0348 21 :DKSKDELICKGDRLAFP 1ypvA 261 :HIEPLKIQLQREPRPFP T0348 39 :KDGIPMMLESEARELAP 1ypvA 285 :VEKIDDFKAEDFQIEGY T0348 57 :EEVKLEHH 1ypvA 302 :NPHPTIKM Number of specific fragments extracted= 3 number of extra gaps= 0 total=1556 Number of alignments=494 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)H64 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)D130 T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEAR 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLLTTKRVF T0348 52 :ELAPEEEVKLEH 1ypvA 95 :STNAKELSSKGV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1558 Number of alignments=495 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set T0348 25 :DELICKGD 1ypvA 277 :PKLRILRK T0348 47 :ESEARELAPEEEV 1ypvA 285 :VEKIDDFKAEDFQ T0348 60 :KLEHHHH 1ypvA 302 :NPHPTIK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1561 Number of alignments=496 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)L13 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)H196 Warning: unaligning (T0348)K15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)H196 Warning: unaligning (T0348)P17 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)Q200 Warning: unaligning (T0348)V19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)Q200 T0348 6 :LEILVCP 1ypvA 187 :LPLMALP T0348 16 :G 1ypvA 197 :A T0348 20 :FDKSKDELICKGDRLAFPIKDGIPM 1ypvA 201 :FYVVNSELSCQLYQRSGDMGLGVPF Number of specific fragments extracted= 3 number of extra gaps= 0 total=1564 Number of alignments=497 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 T0348 7 :EIL 1ypvA 39 :HIL T0348 13 :LCKGP 1ypvA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEA 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLLTTKRV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1567 Number of alignments=498 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 T0348 5 :FLEIL 1ypvA 37 :IQHIL T0348 13 :LCKGP 1ypvA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1570 Number of alignments=499 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set T0348 22 :KSKDELICKGDRLAFPIKDGIPMM 1ypvA 51 :TGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1571 Number of alignments=500 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set T0348 24 :KDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1ypvA 53 :TGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1572 Number of alignments=501 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set T0348 15 :KGPLVFDKS 1ypvA 28 :HGELQYLGQ T0348 24 :KDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1ypvA 53 :TGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTN Number of specific fragments extracted= 2 number of extra gaps= 0 total=1574 Number of alignments=502 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 Warning: unaligning (T0348)V59 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)D130 T0348 5 :FLEIL 1ypvA 37 :IQHIL T0348 13 :LCKGP 1ypvA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLL T0348 50 :ARELAPEEE 1ypvA 98 :AKELSSKGV Number of specific fragments extracted= 4 number of extra gaps= 0 total=1578 Number of alignments=503 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)K15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 Warning: unaligning (T0348)H64 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)D130 T0348 3 :AKFLEILV 1ypvA 31 :LQYLGQIQ T0348 16 :GPLVFDKSKDELICKGDRLAFPIKDGIPMM 1ypvA 45 :VRKDDRTGTGTLSVFGMQARYSLRDEFPLL T0348 47 :ESEAREL 1ypvA 98 :AKELSSK T0348 62 :EH 1ypvA 105 :GV Number of specific fragments extracted= 4 number of extra gaps= 0 total=1582 Number of alignments=504 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)L13 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)H196 Warning: unaligning (T0348)K15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)H196 Warning: unaligning (T0348)P17 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)Q200 Warning: unaligning (T0348)V19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)Q200 T0348 6 :LEILVCP 1ypvA 187 :LPLMALP T0348 16 :G 1ypvA 197 :A T0348 20 :FDKSKDELICKGDRLAFPIKDGIPM 1ypvA 201 :FYVVNSELSCQLYQRSGDMGLGVPF Number of specific fragments extracted= 3 number of extra gaps= 0 total=1585 Number of alignments=505 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 T0348 8 :IL 1ypvA 40 :IL T0348 13 :LCKGP 1ypvA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEA 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLLTTKRV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1588 Number of alignments=506 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ypvA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ypvA)G44 T0348 5 :FLEIL 1ypvA 37 :IQHIL T0348 13 :LCKGP 1ypvA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1591 Number of alignments=507 # 1ypvA read from 1ypvA/merged-a2m # found chain 1ypvA in template set T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1ypvA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1592 Number of alignments=508 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ur6B/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1ur6B/merged-a2m # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 Warning: unaligning (T0348)H64 because last residue in template chain is (1ur6B)D63 T0348 10 :VCPLCKGPL 1ur6B 13 :ECPLCMEPL T0348 23 :SKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEH 1ur6B 22 :EIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1594 Number of alignments=509 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 Warning: unaligning (T0348)H64 because last residue in template chain is (1ur6B)D63 T0348 10 :VCPLCKGPLVFDK 1ur6B 13 :ECPLCMEPLEIDD T0348 24 :KDELICKGD 1ur6B 26 :INFFPCTCG T0348 36 :FPIKDGIPMMLESEARELAPEEEVKLEH 1ur6B 35 :YQICRFCWHRIRTDENGLCPACRKPYPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1597 Number of alignments=510 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 T0348 10 :VCPLCKGPL 1ur6B 13 :ECPLCMEPL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1598 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 10 :VCPLCKGPLVF 1ur6B 13 :ECPLCMEPLEI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1599 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 Warning: unaligning (T0348)H64 because last residue in template chain is (1ur6B)D63 T0348 10 :VCPLCKGPL 1ur6B 13 :ECPLCMEPL T0348 23 :SKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEH 1ur6B 22 :EIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1601 Number of alignments=511 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 Warning: unaligning (T0348)H64 because last residue in template chain is (1ur6B)D63 T0348 10 :VCPLCKGPLVFDKSK 1ur6B 13 :ECPLCMEPLEIDDIN T0348 26 :ELICKGD 1ur6B 28 :FFPCTCG T0348 36 :FPIKDGIPMMLESEARELAPEEEVKLEH 1ur6B 35 :YQICRFCWHRIRTDENGLCPACRKPYPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1604 Number of alignments=512 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 T0348 10 :VCPLCKGPL 1ur6B 13 :ECPLCMEPL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1605 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 10 :VCPLCKGPLVF 1ur6B 13 :ECPLCMEPLEI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1606 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 T0348 10 :VCPLCKGPL 1ur6B 13 :ECPLCMEPL T0348 20 :FDKSKDELIC 1ur6B 22 :EIDDINFFPC T0348 33 :RLAFPIKDGIPMMLESEARELAPE 1ur6B 32 :TCGYQICRFCWHRIRTDENGLCPA T0348 61 :LEHHHHHH 1ur6B 56 :CRKPYPED Number of specific fragments extracted= 4 number of extra gaps= 0 total=1610 Number of alignments=513 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 10 :VCPLCKGPL 1ur6B 13 :ECPLCMEPL T0348 22 :KSKDELIC 1ur6B 24 :DDINFFPC T0348 33 :RLAFPIKDGIPMMLESEARELAPE 1ur6B 32 :TCGYQICRFCWHRIRTDENGLCPA T0348 61 :LEHHHHHH 1ur6B 56 :CRKPYPED Number of specific fragments extracted= 4 number of extra gaps= 0 total=1614 Number of alignments=514 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 10 :VCPLCKGP 1ur6B 52 :LCPACRKP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1615 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 10 :VCPLCKGPL 1ur6B 13 :ECPLCMEPL Number of specific fragments extracted= 1 number of extra gaps= 0 total=1616 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVFD 1ur6B 14 :CPLCMEPLEID Number of specific fragments extracted= 1 number of extra gaps= 0 total=1617 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVFDKS 1ur6B 14 :CPLCMEPLEIDDI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1618 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 T0348 10 :VCPLCKGPLVFDK 1ur6B 13 :ECPLCMEPLEIDD T0348 27 :LICKGDRLAFPIK 1ur6B 26 :INFFPCTCGYQIC T0348 44 :MMLESEARELAPEEEVKLEHHHHHH 1ur6B 39 :RFCWHRIRTDENGLCPACRKPYPED Number of specific fragments extracted= 3 number of extra gaps= 0 total=1621 Number of alignments=515 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 10 :VCPLCKGPLVFDK 1ur6B 13 :ECPLCMEPLEIDD T0348 31 :GDRLAFPI 1ur6B 30 :PCTCGYQI T0348 43 :PMMLESEARELAPEEEVKLEHHHHHH 1ur6B 38 :CRFCWHRIRTDENGLCPACRKPYPED Number of specific fragments extracted= 3 number of extra gaps= 0 total=1624 Number of alignments=516 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 1 :MD 1ur6B 12 :VE T0348 11 :CPLCKGPLVFDKSK 1ur6B 14 :CPLCMEPLEIDDIN T0348 26 :ELICKG 1ur6B 28 :FFPCTC T0348 33 :R 1ur6B 34 :G T0348 36 :FPI 1ur6B 35 :YQI T0348 43 :PMMLESEARELAPEEEVKLEHHH 1ur6B 38 :CRFCWHRIRTDENGLCPACRKPY Number of specific fragments extracted= 6 number of extra gaps= 0 total=1630 Number of alignments=517 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 1 :M 1ur6B 12 :V T0348 10 :VCPLCKGPLV 1ur6B 13 :ECPLCMEPLE T0348 30 :KGDRLAFPIKDGIP 1ur6B 23 :IDDINFFPCTCGYQ T0348 45 :MLESEARELAPEEEVKLEHHHHH 1ur6B 37 :ICRFCWHRIRTDENGLCPACRKP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1634 Number of alignments=518 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVFDK 1ur6B 14 :CPLCMEPLEIDD Number of specific fragments extracted= 1 number of extra gaps= 0 total=1635 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVFDKSK 1ur6B 14 :CPLCMEPLEIDDIN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1636 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVFDKSKD 1ur6B 14 :CPLCMEPLEIDDINF T0348 27 :LICK 1ur6B 29 :FPCT Number of specific fragments extracted= 2 number of extra gaps= 0 total=1638 Number of alignments=519 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 2 :DAKFLEIL 1ur6B 38 :CRFCWHRI T0348 10 :VCPLCKGPL 1ur6B 52 :LCPACRKPY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1640 Number of alignments=520 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 T0348 10 :VCPLCKGPLVF 1ur6B 13 :ECPLCMEPLEI T0348 21 :DKSKDELICKGDRLAFP 1ur6B 45 :IRTDENGLCPACRKPYP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1642 Number of alignments=521 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 T0348 10 :VCPLCKGPLVF 1ur6B 13 :ECPLCMEPLEI T0348 29 :C 1ur6B 38 :C T0348 44 :MMLESEARELAPEEEVKLEHHHHHH 1ur6B 39 :RFCWHRIRTDENGLCPACRKPYPED Number of specific fragments extracted= 3 number of extra gaps= 0 total=1645 Number of alignments=522 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 1 :M 1ur6B 12 :V T0348 10 :VCPLCKGPLVFDKSKD 1ur6B 13 :ECPLCMEPLEIDDINF T0348 27 :L 1ur6B 29 :F T0348 31 :GDRLAFPI 1ur6B 30 :PCTCGYQI T0348 46 :LESEARELAPEEEVKLEHHHHH 1ur6B 38 :CRFCWHRIRTDENGLCPACRKP Number of specific fragments extracted= 5 number of extra gaps= 0 total=1650 Number of alignments=523 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 1 :M 1ur6B 12 :V T0348 10 :VCPLCKGPLV 1ur6B 13 :ECPLCMEPLE T0348 30 :KGDRLAFPIKDGI 1ur6B 23 :IDDINFFPCTCGY T0348 44 :MMLESEARELAPEEEVKLEHHHHH 1ur6B 36 :QICRFCWHRIRTDENGLCPACRKP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1654 Number of alignments=524 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVF 1ur6B 14 :CPLCMEPLEI T0348 21 :DKSKDELICKGDRLAFP 1ur6B 45 :IRTDENGLCPACRKPYP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1656 Number of alignments=525 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVF 1ur6B 14 :CPLCMEPLEI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1657 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVF 1ur6B 14 :CPLCMEPLEI T0348 22 :KSKDELICKGDRLAFP 1ur6B 46 :RTDENGLCPACRKPYP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1659 Number of alignments=526 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 2 :DAKFLEIL 1ur6B 38 :CRFCWHRI T0348 10 :VCPLCKGP 1ur6B 52 :LCPACRKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1661 Number of alignments=527 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 T0348 10 :VCPLCKGPLVFDKSK 1ur6B 13 :ECPLCMEPLEIDDIN T0348 35 :AFPIKDG 1ur6B 28 :FFPCTCG T0348 42 :IPMMLESEARELAPEEEVKLEHHHHHH 1ur6B 37 :ICRFCWHRIRTDENGLCPACRKPYPED Number of specific fragments extracted= 3 number of extra gaps= 0 total=1664 Number of alignments=528 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1ur6B)V12 T0348 10 :VCPLCKGPLVFDKSKD 1ur6B 13 :ECPLCMEPLEIDDINF T0348 30 :KGDRLAFP 1ur6B 29 :FPCTCGYQ T0348 42 :IPMMLESEARELAPEEEVKLEHHHHHH 1ur6B 37 :ICRFCWHRIRTDENGLCPACRKPYPED Number of specific fragments extracted= 3 number of extra gaps= 0 total=1667 Number of alignments=529 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 1 :MD 1ur6B 12 :VE T0348 11 :CPLCKGPLVFDKSK 1ur6B 14 :CPLCMEPLEIDDIN T0348 35 :AFPIKDGIPMM 1ur6B 28 :FFPCTCGYQIC T0348 47 :ESEARELAPEEEV 1ur6B 39 :RFCWHRIRTDENG T0348 60 :KLEHHHHHH 1ur6B 55 :ACRKPYPED Number of specific fragments extracted= 5 number of extra gaps= 0 total=1672 Number of alignments=530 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 1 :MD 1ur6B 12 :VE T0348 11 :CPLCKGPLVF 1ur6B 14 :CPLCMEPLEI T0348 31 :GDRLAFPIKDGI 1ur6B 24 :DDINFFPCTCGY T0348 44 :MMLESEARELAPEEEVKL 1ur6B 36 :QICRFCWHRIRTDENGLC T0348 62 :EHHHHHH 1ur6B 57 :RKPYPED Number of specific fragments extracted= 5 number of extra gaps= 0 total=1677 Number of alignments=531 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVFDK 1ur6B 14 :CPLCMEPLEIDD Number of specific fragments extracted= 1 number of extra gaps= 0 total=1678 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVFDKSK 1ur6B 14 :CPLCMEPLEIDDIN Number of specific fragments extracted= 1 number of extra gaps= 0 total=1679 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVFDKSK 1ur6B 14 :CPLCMEPLEIDDIN T0348 35 :AFPIKDGIPM 1ur6B 28 :FFPCTCGYQI T0348 46 :LESEARELAPEEEVKLEHHHHHH 1ur6B 38 :CRFCWHRIRTDENGLCPACRKPY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1682 Number of alignments=532 # 1ur6B read from 1ur6B/merged-a2m # found chain 1ur6B in template set T0348 11 :CPLCKGPLVF 1ur6B 14 :CPLCMEPLEI T0348 31 :GDRLAFPIKDGI 1ur6B 24 :DDINFFPCTCGY T0348 44 :MMLESEARELAPEEEVKLEHHHHH 1ur6B 36 :QICRFCWHRIRTDENGLCPACRKP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1685 Number of alignments=533 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1rb9/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1rb9/merged-a2m # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)L6 because first residue in template chain is (1rb9)M1 T0348 7 :EILVCPLCKGPLV 1rb9 2 :KKYVCTVCGYEYD T0348 20 :FDKSKDELICK 1rb9 30 :FDDLPADWVCP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1687 Number of alignments=534 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 7 :EILVCPLCKGP 1rb9 35 :ADWVCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1688 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)L6 because first residue in template chain is (1rb9)M1 Warning: unaligning (T0348)H67 because last residue in template chain is (1rb9)A52 T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGI 1rb9 2 :KKYVCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADW T0348 53 :LAPEEEVKLEHHHH 1rb9 38 :VCPVCGAPKSEFEA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1690 Number of alignments=535 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)L6 because first residue in template chain is (1rb9)M1 Warning: unaligning (T0348)H67 because last residue in template chain is (1rb9)A52 T0348 7 :EILVCPLCK 1rb9 2 :KKYVCTVCG T0348 18 :LVFDKSK 1rb9 11 :YEYDPAE T0348 31 :GDR 1rb9 18 :GDP T0348 35 :AFPIKDGIPMM 1rb9 21 :DNGVKPGTSFD T0348 47 :ESEARELAPEEEVKLEHHHH 1rb9 32 :DLPADWVCPVCGAPKSEFEA Number of specific fragments extracted= 5 number of extra gaps= 0 total=1695 Number of alignments=536 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 10 :VCPLCK 1rb9 38 :VCPVCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1696 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 9 :LVCPLCKGP 1rb9 37 :WVCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1697 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)L6 because first residue in template chain is (1rb9)M1 T0348 7 :EILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGI 1rb9 2 :KKYVCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADW T0348 53 :LAPEEEVKLEHHH 1rb9 38 :VCPVCGAPKSEFE T0348 67 :HH 1rb9 51 :AA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1700 Number of alignments=537 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)L6 because first residue in template chain is (1rb9)M1 T0348 7 :EILVCPLCK 1rb9 2 :KKYVCTVCG T0348 18 :LVFDKSK 1rb9 11 :YEYDPAE T0348 31 :GDR 1rb9 18 :GDP T0348 35 :AFPIKDGIPMM 1rb9 21 :DNGVKPGTSFD T0348 47 :ESEARELAPEEEVKLEHHH 1rb9 32 :DLPADWVCPVCGAPKSEFE T0348 67 :HH 1rb9 51 :AA Number of specific fragments extracted= 6 number of extra gaps= 0 total=1706 Number of alignments=538 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 10 :VCPLCK 1rb9 38 :VCPVCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1707 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 9 :LVCPLCKGP 1rb9 37 :WVCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1708 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)K39 because last residue in template chain is (1rb9)A52 T0348 1 :MDA 1rb9 1 :MKK T0348 6 :LEILVCPLCKGPLVFDKSKDEL 1rb9 4 :YVCTVCGYEYDPAEGDPDNGVK T0348 28 :ICKGDRLAFPI 1rb9 41 :VCGAPKSEFEA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1711 Number of alignments=539 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 1 :MDA 1rb9 1 :MKK T0348 9 :LVCPLCK 1rb9 4 :YVCTVCG T0348 18 :LVFDKSKDE 1rb9 11 :YEYDPAEGD T0348 34 :LAFPIKDGIPMMLESE 1rb9 20 :PDNGVKPGTSFDDLPA T0348 51 :RELAPEEEVK 1rb9 36 :DWVCPVCGAP T0348 62 :EHHHHHH 1rb9 46 :KSEFEAA Number of specific fragments extracted= 6 number of extra gaps= 0 total=1717 Number of alignments=540 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 10 :VCPLCK 1rb9 38 :VCPVCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1718 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 9 :LVCPLCKGP 1rb9 37 :WVCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1719 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 9 :LVCPLCKGP 1rb9 37 :WVCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1720 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 9 :LVCPLCKGP 1rb9 37 :WVCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1721 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 1 :MDAK 1rb9 1 :MKKY T0348 28 :ICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 1rb9 5 :VCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1723 Number of alignments=541 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 1 :MDAK 1rb9 1 :MKKY T0348 10 :VCPLCKGPLVFDKSKDE 1rb9 5 :VCTVCGYEYDPAEGDPD T0348 40 :DGIPMMLESEARELAPEEE 1rb9 31 :DDLPADWVCPVCGAPKSEF T0348 66 :HHH 1rb9 50 :EAA Number of specific fragments extracted= 4 number of extra gaps= 0 total=1727 Number of alignments=542 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 1 :MD 1rb9 1 :MK T0348 26 :ELICKGDRLAFPIKDGIP 1rb9 3 :KYVCTVCGYEYDPAEGDP T0348 50 :ARELAPEEEVKLEHHHHH 1rb9 21 :DNGVKPGTSFDDLPADWV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1730 Number of alignments=543 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 1 :MD 1rb9 1 :MK T0348 26 :ELICKGDRLAFPIKDG 1rb9 3 :KYVCTVCGYEYDPAEG T0348 46 :LESE 1rb9 19 :DPDN T0348 50 :ARELAPEEEVKLEHHHHH 1rb9 30 :FDDLPADWVCPVCGAPKS Number of specific fragments extracted= 4 number of extra gaps= 0 total=1734 Number of alignments=544 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 10 :VCPLCKGP 1rb9 38 :VCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1735 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 6 :LEILVCPLCKGP 1rb9 34 :PADWVCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1736 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 25 :DELICKGDRLAFPIKDG 1rb9 2 :KKYVCTVCGYEYDPAEG T0348 48 :SEARELAPEEEVK 1rb9 19 :DPDNGVKPGTSFD Number of specific fragments extracted= 2 number of extra gaps= 0 total=1738 Number of alignments=545 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 25 :DELICKGDRLAFPIKDG 1rb9 2 :KKYVCTVCGYEYDPAEG T0348 46 :LESE 1rb9 19 :DPDN T0348 52 :ELAPE 1rb9 23 :GVKPG T0348 59 :VKL 1rb9 28 :TSF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1742 Number of alignments=546 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 1 :MDAK 1rb9 1 :MKKY T0348 28 :ICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 1rb9 5 :VCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1744 Number of alignments=547 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 1 :MDAK 1rb9 1 :MKKY T0348 10 :VCPLCKGPLVF 1rb9 5 :VCTVCGYEYDP T0348 21 :DKSKDELIC 1rb9 19 :DPDNGVKPG T0348 34 :LA 1rb9 28 :TS T0348 39 :KDGIPMMLESEARELAPEE 1rb9 30 :FDDLPADWVCPVCGAPKSE T0348 65 :HHHH 1rb9 49 :FEAA Number of specific fragments extracted= 6 number of extra gaps= 0 total=1750 Number of alignments=548 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 1 :MD 1rb9 1 :MK T0348 26 :ELICKGDRLAFPIKDGIPM 1rb9 3 :KYVCTVCGYEYDPAEGDPD T0348 49 :E 1rb9 22 :N T0348 52 :ELAPEEEVKLEHHHHH 1rb9 23 :GVKPGTSFDDLPADWV Number of specific fragments extracted= 4 number of extra gaps= 0 total=1754 Number of alignments=549 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 1 :MD 1rb9 1 :MK T0348 26 :ELICKGDRLAFPIKDGIP 1rb9 3 :KYVCTVCGYEYDPAEGDP T0348 48 :SE 1rb9 21 :DN T0348 50 :ARELAPEEEVKLEHHHH 1rb9 30 :FDDLPADWVCPVCGAPK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1758 Number of alignments=550 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 10 :VCPLCKGP 1rb9 38 :VCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1759 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 6 :LEILVCPLCKGP 1rb9 34 :PADWVCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1760 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 25 :DELICKGDRLAFPIKDGIP 1rb9 2 :KKYVCTVCGYEYDPAEGDP T0348 50 :ARELAPEE 1rb9 21 :DNGVKPGT Number of specific fragments extracted= 2 number of extra gaps= 0 total=1762 Number of alignments=551 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 25 :DELICKGDRLAFPIKDGIP 1rb9 2 :KKYVCTVCGYEYDPAEGDP T0348 48 :SE 1rb9 21 :DN T0348 52 :ELAPE 1rb9 23 :GVKPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=1765 Number of alignments=552 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)L6 because first residue in template chain is (1rb9)M1 Warning: unaligning (T0348)P55 because last residue in template chain is (1rb9)A52 T0348 7 :EILVCPLCKGPLVFDKS 1rb9 2 :KKYVCTVCGYEYDPAEG T0348 24 :KDELICKGDRLAFPIKDGIPMMLESEARELA 1rb9 21 :DNGVKPGTSFDDLPADWVCPVCGAPKSEFEA Number of specific fragments extracted= 2 number of extra gaps= 0 total=1767 Number of alignments=553 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)L6 because first residue in template chain is (1rb9)M1 T0348 7 :EILVCPLCKGPLVFDKSKDE 1rb9 2 :KKYVCTVCGYEYDPAEGDPD T0348 27 :LICKGDRLAFPIKDGIPMMLESE 1rb9 24 :VKPGTSFDDLPADWVCPVCGAPK T0348 63 :HHHHHH 1rb9 47 :SEFEAA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1770 Number of alignments=554 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)K24 because first residue in template chain is (1rb9)M1 T0348 25 :DELICKGDRLAFPIKDGIPM 1rb9 2 :KKYVCTVCGYEYDPAEGDPD T0348 48 :SEARELAPEE 1rb9 22 :NGVKPGTSFD T0348 58 :EVKLEHHHHHH 1rb9 42 :CGAPKSEFEAA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1773 Number of alignments=555 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)K24 because first residue in template chain is (1rb9)M1 T0348 25 :DELICKGDRLAFPIKDGIP 1rb9 2 :KKYVCTVCGYEYDPAEGDP T0348 48 :SE 1rb9 21 :DN T0348 52 :ELAPEEEVK 1rb9 23 :GVKPGTSFD T0348 63 :HHHHHH 1rb9 32 :DLPADW Number of specific fragments extracted= 4 number of extra gaps= 0 total=1777 Number of alignments=556 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 10 :VCPLCKGP 1rb9 38 :VCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1778 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 6 :LEILVCPLCKGP 1rb9 34 :PADWVCPVCGAP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1779 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set T0348 25 :DELICKGDRLAFPIKDGIP 1rb9 2 :KKYVCTVCGYEYDPAEGDP T0348 56 :EEEVKLEHH 1rb9 21 :DNGVKPGTS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1781 Number of alignments=557 # 1rb9 read from 1rb9/merged-a2m # found chain 1rb9 in training set Warning: unaligning (T0348)K24 because first residue in template chain is (1rb9)M1 T0348 25 :DELICKGDRLAFPIKDGIP 1rb9 2 :KKYVCTVCGYEYDPAEGDP T0348 56 :EEEVKLEHH 1rb9 21 :DNGVKPGTS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1783 Number of alignments=558 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1jj2Y/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1jj2Y expands to /projects/compbio/data/pdb/1jj2.pdb.gz 1jj2Y:# T0348 read from 1jj2Y/merged-a2m # 1jj2Y read from 1jj2Y/merged-a2m # adding 1jj2Y to template set # found chain 1jj2Y in template set T0348 1 :MDAKFL 1jj2Y 10 :RTGRFG T0348 7 :EILVCPLCKGPLVFDKSKDELICKG 1jj2Y 35 :KKHKCPVCGFKKLKRAGTGIWMCGH T0348 34 :LAFPIKDGI 1jj2Y 60 :CGYKIAGGC T0348 43 :PMMLESEARE 1jj2Y 71 :PETVAGKAVM Number of specific fragments extracted= 4 number of extra gaps= 0 total=1787 Number of alignments=559 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELICK 1jj2Y 34 :KKKHKCPVCGFKKLKRAGTGIWMCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1788 Number of alignments=560 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1jj2Y)A82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1jj2Y 29 :VEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCGYKIA T0348 41 :GIPMMLESEARELAPE 1jj2Y 66 :GGCYQPETVAGKAVMK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1790 Number of alignments=561 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1jj2Y)A82 T0348 1 :MDAKF 1jj2Y 10 :RTGRF T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1jj2Y 34 :KKKHKCPVCGFKKLKRAGTGIWMCGHCGYKIA T0348 41 :GIPMMLESEARELAPE 1jj2Y 66 :GGCYQPETVAGKAVMK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1793 Number of alignments=562 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKG 1jj2Y 29 :VEIKHKKKHKCPVCGFKKLKRAGTGIWMCGH Number of specific fragments extracted= 1 number of extra gaps= 0 total=1794 Number of alignments=563 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELICK 1jj2Y 34 :KKKHKCPVCGFKKLKRAGTGIWMCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1795 Number of alignments=564 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1jj2Y)A82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1jj2Y 29 :VEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCGYKIA T0348 41 :GIPMMLESEARELAPE 1jj2Y 66 :GGCYQPETVAGKAVMK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1797 Number of alignments=565 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 1 :MD 1jj2Y 10 :RT T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1jj2Y 31 :IKHKKKHKCPVCGFKKLKRAGTGIWMCGHCGYKIA T0348 41 :GIPMMLESEARELAPE 1jj2Y 66 :GGCYQPETVAGKAVMK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1800 Number of alignments=566 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 8 :ILVCPLCKGPL 1jj2Y 54 :IWMCGHCGYKI Number of specific fragments extracted= 1 number of extra gaps= 0 total=1801 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 9 :LVCPLCKGPLVF 1jj2Y 37 :HKCPVCGFKKLK Number of specific fragments extracted= 1 number of extra gaps= 0 total=1802 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLC 1jj2Y 39 :CPVC Number of specific fragments extracted= 1 number of extra gaps= 0 total=1803 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLCK 1jj2Y 39 :CPVCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1804 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1jj2Y)A82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDR 1jj2Y 29 :VEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCG T0348 36 :FPIKDGI 1jj2Y 62 :YKIAGGC T0348 43 :PMMLESEAREL 1jj2Y 71 :PETVAGKAVMK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1807 Number of alignments=567 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDR 1jj2Y 29 :VEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCG T0348 36 :FPIKDGI 1jj2Y 62 :YKIAGGC T0348 43 :PMMLESEAR 1jj2Y 71 :PETVAGKAV T0348 66 :HHH 1jj2Y 80 :MKA Number of specific fragments extracted= 4 number of extra gaps= 0 total=1811 Number of alignments=568 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1jj2Y)A82 T0348 1 :MDAKF 1jj2Y 10 :RTGRF T0348 11 :CPLC 1jj2Y 39 :CPVC T0348 15 :KGPLVFDK 1jj2Y 44 :FKKLKRAG T0348 24 :KDELICKGDRL 1jj2Y 52 :TGIWMCGHCGY T0348 37 :PIKDGI 1jj2Y 63 :KIAGGC T0348 50 :ARELAPEEEVKLE 1jj2Y 69 :YQPETVAGKAVMK Number of specific fragments extracted= 6 number of extra gaps= 0 total=1817 Number of alignments=569 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1jj2Y)A82 T0348 1 :M 1jj2Y 10 :R T0348 2 :DAKFLEILV 1jj2Y 19 :GLKIRVRVA T0348 11 :CPLC 1jj2Y 39 :CPVC T0348 15 :KGPLVFDKS 1jj2Y 44 :FKKLKRAGT T0348 25 :DELICKGDRLAFPIKDGIP 1jj2Y 53 :GIWMCGHCGYKIAGGCYQP T0348 53 :LAPEEEVKLE 1jj2Y 72 :ETVAGKAVMK Number of specific fragments extracted= 6 number of extra gaps= 0 total=1823 Number of alignments=570 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRL 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCGY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1824 Number of alignments=571 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRL 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCGY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1825 Number of alignments=572 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLC 1jj2Y 39 :CPVC T0348 15 :KGPLVFDK 1jj2Y 44 :FKKLKRAG T0348 24 :KDELICKGDRLA 1jj2Y 52 :TGIWMCGHCGYK T0348 38 :IKDG 1jj2Y 64 :IAGG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1829 Number of alignments=573 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLC 1jj2Y 39 :CPVC T0348 15 :KGPLVFDKS 1jj2Y 44 :FKKLKRAGT T0348 25 :DELICKGDRLAFP 1jj2Y 53 :GIWMCGHCGYKIA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1832 Number of alignments=574 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1jj2Y)A82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDR 1jj2Y 29 :VEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCG T0348 36 :FPIKDGI 1jj2Y 62 :YKIAGGC T0348 43 :PMMLESEAREL 1jj2Y 71 :PETVAGKAVMK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1835 Number of alignments=575 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDR 1jj2Y 29 :VEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCG T0348 36 :FPIKDGI 1jj2Y 62 :YKIAGGC T0348 43 :PMMLESEA 1jj2Y 71 :PETVAGKA T0348 65 :HHHH 1jj2Y 79 :VMKA Number of specific fragments extracted= 4 number of extra gaps= 0 total=1839 Number of alignments=576 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1jj2Y)A82 T0348 1 :M 1jj2Y 10 :R T0348 2 :DAKFLEILV 1jj2Y 19 :GLKIRVRVA T0348 11 :CPLCKGPLVFDKSKDELICKGDR 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCG T0348 36 :FPIKDGI 1jj2Y 62 :YKIAGGC T0348 50 :ARELAPEEEVKLE 1jj2Y 69 :YQPETVAGKAVMK Number of specific fragments extracted= 5 number of extra gaps= 0 total=1844 Number of alignments=577 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1jj2Y)A82 T0348 1 :M 1jj2Y 10 :R T0348 2 :DAKFLEILV 1jj2Y 19 :GLKIRVRVA T0348 11 :CPLC 1jj2Y 39 :CPVC T0348 15 :KGPLVFD 1jj2Y 44 :FKKLKRA T0348 23 :SKDELICKGDRLAFPIKDGIP 1jj2Y 51 :GTGIWMCGHCGYKIAGGCYQP T0348 53 :LAPEEEVKLE 1jj2Y 72 :ETVAGKAVMK Number of specific fragments extracted= 6 number of extra gaps= 0 total=1850 Number of alignments=578 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRL 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCGY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1851 Number of alignments=579 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRL 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCGY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1852 Number of alignments=580 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDR 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCG T0348 36 :FPIKDGI 1jj2Y 62 :YKIAGGC Number of specific fragments extracted= 2 number of extra gaps= 0 total=1854 Number of alignments=581 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLC 1jj2Y 39 :CPVC T0348 15 :KGPLVFD 1jj2Y 44 :FKKLKRA T0348 23 :SKDELICKGDRLAFP 1jj2Y 51 :GTGIWMCGHCGYKIA Number of specific fragments extracted= 3 number of extra gaps= 0 total=1857 Number of alignments=582 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1jj2Y)A82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDR 1jj2Y 29 :VEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCG T0348 36 :FPIKDGI 1jj2Y 62 :YKIAGGC T0348 43 :PMMLESEAREL 1jj2Y 71 :PETVAGKAVMK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1860 Number of alignments=583 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1jj2Y)A82 T0348 1 :MDAKF 1jj2Y 10 :RTGRF T0348 11 :CPLCKGPLVFDKSKDELICKGDR 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCG T0348 36 :FPIKDGI 1jj2Y 62 :YKIAGGC T0348 43 :PMMLESEAREL 1jj2Y 71 :PETVAGKAVMK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1864 Number of alignments=584 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1jj2Y)A82 T0348 1 :M 1jj2Y 10 :R T0348 2 :DAKFLEILV 1jj2Y 19 :GLKIRVRVA T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEAREL 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCGYKIAGGCYQPETVAGKAVMK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1867 Number of alignments=585 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 1 :M 1jj2Y 10 :R T0348 2 :DAKFLEILV 1jj2Y 19 :GLKIRVRVA T0348 11 :CPLCK 1jj2Y 39 :CPVCG T0348 16 :GPLVFDKS 1jj2Y 45 :KKLKRAGT T0348 25 :DELICKGDRLAFPIKDGIPM 1jj2Y 53 :GIWMCGHCGYKIAGGCYQPE T0348 46 :LESEARELA 1jj2Y 73 :TVAGKAVMK Number of specific fragments extracted= 6 number of extra gaps= 0 total=1873 Number of alignments=586 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRL 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCGY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1874 Number of alignments=587 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRL 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCGY Number of specific fragments extracted= 1 number of extra gaps= 0 total=1875 Number of alignments=588 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLA 1jj2Y 39 :CPVCGFKKLKRAGTGIWMCGHCGYK T0348 38 :IKDG 1jj2Y 64 :IAGG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1877 Number of alignments=589 # 1jj2Y read from 1jj2Y/merged-a2m # found chain 1jj2Y in template set T0348 11 :CPLCK 1jj2Y 39 :CPVCG T0348 16 :GPLVFDKS 1jj2Y 45 :KKLKRAGT T0348 25 :DELICKGDRLA 1jj2Y 53 :GIWMCGHCGYK Number of specific fragments extracted= 3 number of extra gaps= 0 total=1880 Number of alignments=590 # Reading fragments from alignment file # Attempting to read fragment alignments from file 5rxn/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 5rxn expands to /projects/compbio/data/pdb/5rxn.pdb.gz 5rxn:Warning: there is no chain 5rxn will retry with 5rxnA # T0348 read from 5rxn/merged-a2m # 5rxn read from 5rxn/merged-a2m # adding 5rxn to template set # found chain 5rxn in template set Warning: unaligning (T0348)L6 because first residue in template chain is (5rxn)M1 T0348 7 :EILVCPLCKGPLV 5rxn 2 :KKYTCTVCGYIYD T0348 20 :FDKSKDELICK 5rxn 30 :FKDIPDDWVCP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1882 Number of alignments=591 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 7 :EILVCPLCKGP 5rxn 35 :DDWVCPLCGVG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1883 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set Warning: unaligning (T0348)G41 because last residue in template chain is (5rxn)E54 T0348 1 :MDA 5rxn 1 :MKK T0348 6 :LEILVCPLCKGPLVFDKSKDEL 5rxn 4 :YTCTVCGYIYDPEDGDPDDGVN T0348 28 :ICKGDRLAFPIKD 5rxn 41 :LCGVGKDEFEEVE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1886 Number of alignments=592 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 1 :MDA 5rxn 1 :MKK T0348 9 :LVCPLCK 5rxn 4 :YTCTVCG T0348 18 :LVFDKSKDE 5rxn 11 :YIYDPEDGD T0348 34 :LAFPIKDGIPMMLESE 5rxn 20 :PDDGVNPGTDFKDIPD T0348 51 :RELAPEEEVKLEHHHH 5rxn 36 :DWVCPLCGVGKDEFEE T0348 67 :HH 5rxn 53 :EE Number of specific fragments extracted= 6 number of extra gaps= 0 total=1892 Number of alignments=593 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 10 :VCPLCK 5rxn 38 :VCPLCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1893 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 9 :LVCPLCKGP 5rxn 37 :WVCPLCGVG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1894 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 9 :LVCPLC 5rxn 37 :WVCPLC Number of specific fragments extracted= 1 number of extra gaps= 0 total=1895 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 9 :LVCPLCK 5rxn 37 :WVCPLCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1896 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set Warning: unaligning (T0348)H63 because last residue in template chain is (5rxn)E54 T0348 1 :MDAK 5rxn 1 :MKKY T0348 28 :ICKGDRLAFPIKDG 5rxn 5 :TCTVCGYIYDPEDG T0348 42 :IPMMLESEARELAPEEEVKLE 5rxn 33 :IPDDWVCPLCGVGKDEFEEVE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1899 Number of alignments=594 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set Warning: unaligning (T0348)H63 because last residue in template chain is (5rxn)E54 T0348 1 :MDAKFLE 5rxn 1 :MKKYTCT T0348 10 :VCPLCKGPLVFDKSKDE 5rxn 8 :VCGYIYDPEDGDPDDGV T0348 27 :L 5rxn 30 :F T0348 40 :DGIPMMLESEARELAPEEEVKLE 5rxn 31 :KDIPDDWVCPLCGVGKDEFEEVE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1903 Number of alignments=595 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 1 :MD 5rxn 1 :MK T0348 26 :ELICKGDRLAFPIKDGIP 5rxn 3 :KYTCTVCGYIYDPEDGDP T0348 48 :SEA 5rxn 21 :DDG T0348 51 :RELAPEEEVKLEH 5rxn 31 :KDIPDDWVCPLCG T0348 64 :HHHHH 5rxn 50 :EEVEE Number of specific fragments extracted= 5 number of extra gaps= 0 total=1908 Number of alignments=596 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 1 :MD 5rxn 1 :MK T0348 26 :ELICKGDRLAFPIKDG 5rxn 3 :KYTCTVCGYIYDPEDG T0348 46 :LESE 5rxn 19 :DPDD T0348 50 :ARELAPEEEVKLEHHHHH 5rxn 30 :FKDIPDDWVCPLCGVGKD Number of specific fragments extracted= 4 number of extra gaps= 0 total=1912 Number of alignments=597 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 3 :AKFLEILVCPLCK 5rxn 31 :KDIPDDWVCPLCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1913 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 6 :LEILVCPLC 5rxn 34 :PDDWVCPLC Number of specific fragments extracted= 1 number of extra gaps= 0 total=1914 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 26 :ELICKGDRLAFPIKDG 5rxn 3 :KYTCTVCGYIYDPEDG T0348 48 :SEARELAPEEEVKLEHH 5rxn 19 :DPDDGVNPGTDFKDIPD Number of specific fragments extracted= 2 number of extra gaps= 0 total=1916 Number of alignments=598 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 27 :LICKGDRLAFPIKDG 5rxn 4 :YTCTVCGYIYDPEDG T0348 46 :LESE 5rxn 19 :DPDD T0348 52 :ELAPE 5rxn 23 :GVNPG T0348 59 :VKLEHHHHH 5rxn 28 :TDFKDIPDD Number of specific fragments extracted= 4 number of extra gaps= 0 total=1920 Number of alignments=599 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set Warning: unaligning (T0348)H63 because last residue in template chain is (5rxn)E54 T0348 1 :MDAK 5rxn 1 :MKKY T0348 28 :ICKGDRLAFPIKDG 5rxn 5 :TCTVCGYIYDPEDG T0348 42 :IPMMLESEARELAPEEEVKLE 5rxn 33 :IPDDWVCPLCGVGKDEFEEVE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1923 Number of alignments=600 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 1 :MDAKFLE 5rxn 1 :MKKYTCT T0348 10 :VCPLCKGPLVFDKSKD 5rxn 8 :VCGYIYDPEDGDPDDG T0348 28 :ICKGDR 5rxn 24 :VNPGTD T0348 39 :KDGIPMMLESEARELAPEEEVKLE 5rxn 30 :FKDIPDDWVCPLCGVGKDEFEEVE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1927 Number of alignments=601 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 1 :MD 5rxn 1 :MK T0348 26 :ELICKGDRLAFPIKDGIPM 5rxn 3 :KYTCTVCGYIYDPEDGDPD T0348 47 :ESEARELAPE 5rxn 27 :GTDFKDIPDD T0348 57 :EEVKLEHHHHHH 5rxn 43 :GVGKDEFEEVEE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1931 Number of alignments=602 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 1 :MD 5rxn 1 :MK T0348 26 :ELICKGDRLAFPIKDGIP 5rxn 3 :KYTCTVCGYIYDPEDGDP T0348 48 :SE 5rxn 21 :DD T0348 50 :ARELAPEEEVKLEHHHHH 5rxn 30 :FKDIPDDWVCPLCGVGKD Number of specific fragments extracted= 4 number of extra gaps= 0 total=1935 Number of alignments=603 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 3 :AKFLEILVCPLCK 5rxn 31 :KDIPDDWVCPLCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1936 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 6 :LEILVCPLC 5rxn 34 :PDDWVCPLC Number of specific fragments extracted= 1 number of extra gaps= 0 total=1937 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 26 :ELICKGDRLAFPIKDGIP 5rxn 3 :KYTCTVCGYIYDPEDGDP T0348 48 :S 5rxn 21 :D T0348 51 :RELAPEEEVKLEH 5rxn 22 :DGVNPGTDFKDIP Number of specific fragments extracted= 3 number of extra gaps= 0 total=1940 Number of alignments=604 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 26 :ELICKGDRLAFPIKDGIP 5rxn 3 :KYTCTVCGYIYDPEDGDP T0348 48 :SE 5rxn 21 :DD T0348 52 :ELAPE 5rxn 23 :GVNPG T0348 59 :VKLEH 5rxn 28 :TDFKD Number of specific fragments extracted= 4 number of extra gaps= 0 total=1944 Number of alignments=605 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 1 :MDAK 5rxn 1 :MKKY T0348 28 :ICKGDRLAFPIKDGIPMMLESEARELAPEEEV 5rxn 5 :TCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDD T0348 60 :KLEHHHHHH 5rxn 46 :KDEFEEVEE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1947 Number of alignments=606 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 1 :MDAK 5rxn 1 :MKKY T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKGDRLA 5rxn 8 :VCGYIYDPEDGDPDDGVNPGTDFKDIPDDWV T0348 53 :LAPEEEVKLEHHHHHH 5rxn 39 :CPLCGVGKDEFEEVEE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1950 Number of alignments=607 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 1 :MD 5rxn 1 :MK T0348 26 :ELICKGDRLAFPIKDGIPM 5rxn 3 :KYTCTVCGYIYDPEDGDPD T0348 48 :SEARELAPEEEVKLEH 5rxn 22 :DGVNPGTDFKDIPDDW T0348 64 :HHHHH 5rxn 50 :EEVEE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1954 Number of alignments=608 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 1 :MD 5rxn 1 :MK T0348 26 :ELICKGDRLAFPIKDGIP 5rxn 3 :KYTCTVCGYIYDPEDGDP T0348 48 :SE 5rxn 21 :DD T0348 52 :ELAPEE 5rxn 32 :DIPDDW T0348 58 :EVKLEH 5rxn 43 :GVGKDE T0348 64 :HHHHH 5rxn 50 :EEVEE Number of specific fragments extracted= 6 number of extra gaps= 0 total=1960 Number of alignments=609 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 3 :AKFLEILVCPLCK 5rxn 31 :KDIPDDWVCPLCG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1961 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 5 :FLEILVCPLC 5rxn 33 :IPDDWVCPLC Number of specific fragments extracted= 1 number of extra gaps= 0 total=1962 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 25 :DELICKGDRLAFPIKDGIPM 5rxn 2 :KKYTCTVCGYIYDPEDGDPD T0348 48 :SEARELAPEEE 5rxn 22 :DGVNPGTDFKD Number of specific fragments extracted= 2 number of extra gaps= 0 total=1964 Number of alignments=610 # 5rxn read from 5rxn/merged-a2m # found chain 5rxn in template set T0348 26 :ELICKGDRLAFPIKDGIP 5rxn 3 :KYTCTVCGYIYDPEDGDP T0348 56 :EEEVKLEHH 5rxn 21 :DDGVNPGTD Number of specific fragments extracted= 2 number of extra gaps= 0 total=1966 Number of alignments=611 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1d0qA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1d0qA/merged-a2m # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)D2 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)R4 Warning: unaligning (T0348)A3 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)R4 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 1 :M 1d0qA 2 :G T0348 4 :KFLEI 1d0qA 5 :IPEET T0348 9 :LVCPLCKG 1d0qA 38 :GLCPFHGE T0348 17 :PLVFDKS 1d0qA 47 :TPSFSVS T0348 24 :KDELICK 1d0qA 56 :KQIFHCF T0348 31 :GDRLAFPI 1d0qA 68 :GNAFTFLM T0348 39 :KDGIPMM 1d0qA 77 :IEGIPFV T0348 48 :SEARELAPEEEVKLEHHH 1d0qA 84 :EAAKRLAAKAGVDLSVYE Number of specific fragments extracted= 8 number of extra gaps= 2 total=1974 Number of alignments=612 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 40 :DGIP 1d0qA 78 :EGIP Number of specific fragments extracted= 1 number of extra gaps= 0 total=1975 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)H66 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELIC 1d0qA 10 :IEAIRRGVDIVDVIGEYVQLKRQGRNYFG T0348 30 :KGDRLAFPIKDGIPMMLES 1d0qA 67 :GGNAFTFLMDIEGIPFVEA T0348 50 :ARELAPEEEVKLEHHH 1d0qA 86 :AKRLAAKAGVDLSVYE Number of specific fragments extracted= 3 number of extra gaps= 1 total=1978 Number of alignments=613 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)D2 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)R4 Warning: unaligning (T0348)A3 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)R4 Warning: unaligning (T0348)H66 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 1 :M 1d0qA 2 :G T0348 4 :KFLE 1d0qA 8 :ETIE T0348 8 :ILVCPLCKG 1d0qA 37 :FGLCPFHGE T0348 17 :PLVFDKSKDELIC 1d0qA 49 :SFSVSPEKQIFHC T0348 30 :KGDRLAFPIKDGIPMMLES 1d0qA 67 :GGNAFTFLMDIEGIPFVEA T0348 50 :ARELAPEEEVKLEHHH 1d0qA 86 :AKRLAAKAGVDLSVYE Number of specific fragments extracted= 6 number of extra gaps= 2 total=1984 Number of alignments=614 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 30 :KGDRLAFPIK 1d0qA 67 :GGNAFTFLMD Number of specific fragments extracted= 1 number of extra gaps= 0 total=1985 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 22 :KSKDELIC 1d0qA 54 :PEKQIFHC T0348 30 :KGDRLAF 1d0qA 67 :GGNAFTF Number of specific fragments extracted= 2 number of extra gaps= 0 total=1987 Number of alignments=615 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)H66 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 1 :MDAKFLE 1d0qA 5 :IPEETIE T0348 8 :ILVCPLCKG 1d0qA 37 :FGLCPFHGE T0348 17 :PLVFDKSKDELIC 1d0qA 49 :SFSVSPEKQIFHC T0348 30 :KGDRLAF 1d0qA 67 :GGNAFTF T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHH 1d0qA 74 :LMDIEGIPFVEAAKRLAAKAGVDLSVYE Number of specific fragments extracted= 5 number of extra gaps= 1 total=1992 Number of alignments=616 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)M1 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)R4 Warning: unaligning (T0348)H66 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 2 :DAKFL 1d0qA 6 :PEETI T0348 7 :EILVCPLCKG 1d0qA 36 :YFGLCPFHGE T0348 17 :PLVFDKSKDELICK 1d0qA 49 :SFSVSPEKQIFHCF T0348 31 :GDRLAFPIK 1d0qA 68 :GNAFTFLMD T0348 41 :GIPMMLESEARELAPEEEVKLEHHH 1d0qA 77 :IEGIPFVEAAKRLAAKAGVDLSVYE Number of specific fragments extracted= 5 number of extra gaps= 2 total=1997 Number of alignments=617 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 8 :ILVCPLCK 1d0qA 37 :FGLCPFHG Number of specific fragments extracted= 1 number of extra gaps= 0 total=1998 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 9 :LVCPLCKG 1d0qA 38 :GLCPFHGE T0348 17 :PLVFDKSKDELICK 1d0qA 49 :SFSVSPEKQIFHCF T0348 31 :GD 1d0qA 68 :GN Number of specific fragments extracted= 3 number of extra gaps= 0 total=2001 Number of alignments=618 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICK 1d0qA 10 :IEAIRRGVDIVDVIGEYVQLKRQGRNYFGL T0348 31 :GDRLAFPIK 1d0qA 45 :EKTPSFSVS T0348 40 :DGIPMMLESEARELAPEEEVKLEHHHHHH 1d0qA 69 :NAFTFLMDIEGIPFVEAAKRLAAKAGVDL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2004 Number of alignments=619 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 1 :MDAKFLEIL 1d0qA 5 :IPEETIEAI T0348 10 :VCPLCKGPLVFDKSKDELI 1d0qA 19 :IVDVIGEYVQLKRQGRNYF T0348 29 :C 1d0qA 61 :C T0348 30 :KGDRLAFPIKDGI 1d0qA 67 :GGNAFTFLMDIEG T0348 44 :MMLESEARELAPEEEVKLEHH 1d0qA 80 :IPFVEAAKRLAAKAGVDLSVY T0348 66 :H 1d0qA 101 :E Number of specific fragments extracted= 6 number of extra gaps= 1 total=2010 Number of alignments=620 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 29 :CKGDRLAFPIK 1d0qA 66 :AGGNAFTFLMD Number of specific fragments extracted= 1 number of extra gaps= 0 total=2011 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 31 :G 1d0qA 68 :G Number of specific fragments extracted= 1 number of extra gaps= 0 total=2012 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 40 :DGIPMM 1d0qA 78 :EGIPFV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2013 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Number of specific fragments extracted= 0 number of extra gaps= 0 total=2013 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)D2 because first residue in template chain is (1d0qA)G2 Warning: unaligning (T0348)A3 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)R4 Warning: unaligning (T0348)K4 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)R4 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 5 :FLEILVCPLCKGPLVFDKSKDE 1d0qA 5 :IPEETIEAIRRGVDIVDVIGEY T0348 27 :LICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHH 1d0qA 62 :FGCGAGGNAFTFLMDIEGIPFVEAAKRLAAKAGVDLSVYE Number of specific fragments extracted= 2 number of extra gaps= 1 total=2015 Number of alignments=621 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)D2 because first residue in template chain is (1d0qA)G2 Warning: unaligning (T0348)A3 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)R4 Warning: unaligning (T0348)K4 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)R4 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 5 :FLE 1d0qA 5 :IPE T0348 10 :VCPLC 1d0qA 39 :LCPFH T0348 15 :KGPLVFDKSKDELICKGDR 1d0qA 47 :TPSFSVSPEKQIFHCFGCG T0348 34 :LAFPI 1d0qA 69 :NAFTF T0348 39 :KDGIPMMLESEARELA 1d0qA 77 :IEGIPFVEAAKRLAAK T0348 57 :EEVKLE 1d0qA 93 :AGVDLS T0348 64 :HHH 1d0qA 99 :VYE Number of specific fragments extracted= 7 number of extra gaps= 1 total=2022 Number of alignments=622 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)D2 because first residue in template chain is (1d0qA)G2 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 3 :AKFLEIL 1d0qA 7 :EETIEAI T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAGGN T0348 39 :KDGIPM 1d0qA 77 :IEGIPF T0348 47 :ESEARELAPEEEVKLEHH 1d0qA 83 :VEAAKRLAAKAGVDLSVY T0348 66 :H 1d0qA 101 :E Number of specific fragments extracted= 6 number of extra gaps= 1 total=2028 Number of alignments=623 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 2 :DAKFLEILV 1d0qA 6 :PEETIEAIR T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAGGN T0348 40 :DGIPM 1d0qA 78 :EGIPF T0348 47 :ESEARELAPEEEVKL 1d0qA 83 :VEAAKRLAAKAGVDL T0348 63 :HHHH 1d0qA 98 :SVYE Number of specific fragments extracted= 6 number of extra gaps= 1 total=2034 Number of alignments=624 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDR 1d0qA 47 :TPSFSVSPEKQIFHCFGCG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2036 Number of alignments=625 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDR 1d0qA 47 :TPSFSVSPEKQIFHCFGCG T0348 34 :LAFPI 1d0qA 69 :NAFTF T0348 39 :KDGIPMML 1d0qA 77 :IEGIPFVE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2040 Number of alignments=626 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAGGN Number of specific fragments extracted= 2 number of extra gaps= 0 total=2042 Number of alignments=627 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLA 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2044 Number of alignments=628 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)D2 because first residue in template chain is (1d0qA)G2 Warning: unaligning (T0348)A3 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)R4 Warning: unaligning (T0348)K4 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)R4 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 5 :FLEILVCPLCKGPLVF 1d0qA 5 :IPEETIEAIRRGVDIV T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHH 1d0qA 56 :KQIFHCFGCGAGGNAFTFLMDIEGIPFVEAAKRLAAKAGVDLSVYE Number of specific fragments extracted= 2 number of extra gaps= 1 total=2046 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)D2 because first residue in template chain is (1d0qA)G2 Warning: unaligning (T0348)A3 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)R4 Warning: unaligning (T0348)K4 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)R4 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 5 :FLEILVCPLCK 1d0qA 5 :IPEETIEAIRR T0348 21 :DKSKDELICKGDR 1d0qA 53 :SPEKQIFHCFGCG T0348 34 :LAFPI 1d0qA 69 :NAFTF T0348 39 :KDGIPMMLESEARELAPE 1d0qA 77 :IEGIPFVEAAKRLAAKAG T0348 59 :VKLE 1d0qA 95 :VDLS T0348 64 :HHH 1d0qA 99 :VYE Number of specific fragments extracted= 6 number of extra gaps= 1 total=2052 Number of alignments=629 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)H66 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 2 :DAKFLEILV 1d0qA 6 :PEETIEAIR T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAGGN T0348 39 :KDGIPM 1d0qA 77 :IEGIPF T0348 47 :ESEARELAPEEEVKLEHHH 1d0qA 83 :VEAAKRLAAKAGVDLSVYE Number of specific fragments extracted= 5 number of extra gaps= 1 total=2057 Number of alignments=630 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)H66 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 2 :DAKFLEILV 1d0qA 6 :PEETIEAIR T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAGGN T0348 40 :DGIPM 1d0qA 78 :EGIPF T0348 47 :ESEARELAPEEEVKLEHHH 1d0qA 83 :VEAAKRLAAKAGVDLSVYE Number of specific fragments extracted= 5 number of extra gaps= 1 total=2062 Number of alignments=631 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDR 1d0qA 47 :TPSFSVSPEKQIFHCFGCG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2064 Number of alignments=632 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDR 1d0qA 47 :TPSFSVSPEKQIFHCFGCG T0348 34 :LAFPI 1d0qA 69 :NAFTF T0348 39 :KDGIPMML 1d0qA 77 :IEGIPFVE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2068 Number of alignments=633 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAGGN T0348 39 :KDGIPM 1d0qA 77 :IEGIPF Number of specific fragments extracted= 3 number of extra gaps= 0 total=2071 Number of alignments=634 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLA 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2073 Number of alignments=635 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)D2 because first residue in template chain is (1d0qA)G2 Warning: unaligning (T0348)A3 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)R4 Warning: unaligning (T0348)K4 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)R4 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 5 :FLE 1d0qA 5 :IPE T0348 8 :ILVCPLCKGPLVFDKSKDE 1d0qA 37 :FGLCPFHGEKTPSFSVSPE T0348 27 :LICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHH 1d0qA 62 :FGCGAGGNAFTFLMDIEGIPFVEAAKRLAAKAGVDLSVYE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2076 Number of alignments=636 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)D2 because first residue in template chain is (1d0qA)G2 Warning: unaligning (T0348)A3 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)R4 Warning: unaligning (T0348)K4 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)R4 Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 5 :FLE 1d0qA 5 :IPE T0348 10 :VCPLCKGP 1d0qA 39 :LCPFHGEK T0348 18 :LVFDKSKDELICKGDRL 1d0qA 50 :FSVSPEKQIFHCFGCGA T0348 35 :AFPI 1d0qA 70 :AFTF T0348 39 :KDGIPMM 1d0qA 77 :IEGIPFV T0348 49 :EARELAPEEEVKLEHHHH 1d0qA 84 :EAAKRLAAKAGVDLSVYE Number of specific fragments extracted= 6 number of extra gaps= 1 total=2082 Number of alignments=637 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 2 :DAKFLEILV 1d0qA 6 :PEETIEAIR T0348 11 :CPLCK 1d0qA 40 :CPFHG T0348 16 :GPLVFDKSKDELICKGDRLAFP 1d0qA 48 :PSFSVSPEKQIFHCFGCGAGGN T0348 40 :DGIPM 1d0qA 78 :EGIPF T0348 47 :ESEARELAPE 1d0qA 83 :VEAAKRLAAK T0348 58 :EVKLEHHHH 1d0qA 93 :AGVDLSVYE Number of specific fragments extracted= 6 number of extra gaps= 1 total=2088 Number of alignments=638 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set Warning: unaligning (T0348)H67 because of BadResidue code BAD_PEPTIDE in next template residue (1d0qA)D103 Warning: unaligning (T0348)H68 because of BadResidue code BAD_PEPTIDE at template residue (1d0qA)D103 T0348 2 :DAKFLEILV 1d0qA 6 :PEETIEAIR T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAGGN T0348 40 :DGIP 1d0qA 78 :EGIP T0348 47 :ESEAREL 1d0qA 83 :VEAAKRL T0348 54 :A 1d0qA 96 :D T0348 55 :PEE 1d0qA 98 :SVY T0348 66 :H 1d0qA 101 :E Number of specific fragments extracted= 8 number of extra gaps= 1 total=2096 Number of alignments=639 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 40 :DGIPMM 1d0qA 78 :EGIPFV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2097 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 20 :FDKSKDELICKGDRL 1d0qA 52 :VSPEKQIFHCFGCGA Number of specific fragments extracted= 1 number of extra gaps= 0 total=2098 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 11 :CPLCK 1d0qA 40 :CPFHG T0348 16 :GPLVFDKSKDELICKGDRLAF 1d0qA 48 :PSFSVSPEKQIFHCFGCGAGG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2100 Number of alignments=640 # 1d0qA read from 1d0qA/merged-a2m # found chain 1d0qA in training set T0348 11 :CPLC 1d0qA 40 :CPFH T0348 15 :KGPLVFDKSKDELICKGDRLA 1d0qA 47 :TPSFSVSPEKQIFHCFGCGAG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2102 Number of alignments=641 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1dl6A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1dl6A/merged-a2m # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1dl6A)K59 T0348 1 :MDAKFLEILVCPLCK 1dl6A 2 :ASTSRLDALPRVTCP T0348 16 :GPLVFDKSKDELICKGDRLAFP 1dl6A 21 :AILVEDYRAGDMICPECGLVVG T0348 41 :GIPMMLESEARELAPE 1dl6A 43 :DRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2105 Number of alignments=642 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 10 :VCPLCK 1dl6A 14 :TCPNHP T0348 16 :GPLVFDKSKDELICK 1dl6A 21 :AILVEDYRAGDMICP Number of specific fragments extracted= 2 number of extra gaps= 0 total=2107 Number of alignments=643 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1dl6A)K59 T0348 1 :MDAKFLEILVCPLCKGP 1dl6A 5 :SRLDALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKGDRL 1dl6A 23 :LVEDYRAGDMICPECGL T0348 38 :IKDGIPMMLESEARELAPE 1dl6A 40 :VVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2110 Number of alignments=644 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1dl6A)K59 T0348 1 :MDAKFLEILVCPLCKGP 1dl6A 5 :SRLDALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKGDRLA 1dl6A 23 :LVEDYRAGDMICPECGLV T0348 38 :IKDGI 1dl6A 41 :VGDRV T0348 44 :MMLESEARELAPE 1dl6A 46 :IDVGSEWRTFSND Number of specific fragments extracted= 4 number of extra gaps= 0 total=2114 Number of alignments=645 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 6 :LEILVCPLCKGP 1dl6A 10 :LPRVTCPNHPDA T0348 18 :LVFDKSKDELICKG 1dl6A 23 :LVEDYRAGDMICPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2116 Number of alignments=646 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 5 :FLEILVCPLCKGP 1dl6A 9 :ALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKG 1dl6A 23 :LVEDYRAGDMICPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2118 Number of alignments=647 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1dl6A)K59 T0348 1 :MDAKFLEILVCPLCKGP 1dl6A 5 :SRLDALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKGDRL 1dl6A 23 :LVEDYRAGDMICPECGL T0348 38 :IKDGIPMMLESEARELAPE 1dl6A 40 :VVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2121 Number of alignments=648 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1dl6A)K59 T0348 1 :M 1dl6A 2 :A T0348 2 :DAKFLEILVCPLCKG 1dl6A 6 :RLDALPRVTCPNHPD T0348 17 :PLVFDKSKDELICKG 1dl6A 22 :ILVEDYRAGDMICPE T0348 38 :IKDGIPMMLESEARELAPE 1dl6A 40 :VVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 4 number of extra gaps= 0 total=2125 Number of alignments=649 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 6 :LEILVCPLCKGP 1dl6A 10 :LPRVTCPNHPDA T0348 18 :LVFDKSKDELICKG 1dl6A 23 :LVEDYRAGDMICPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2127 Number of alignments=650 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 6 :LEILVCPLCKG 1dl6A 10 :LPRVTCPNHPD T0348 17 :PLVFDKSKDELICKG 1dl6A 22 :ILVEDYRAGDMICPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2129 Number of alignments=651 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 9 :LVCPLC 1dl6A 32 :MICPEC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2130 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 9 :LVCPLC 1dl6A 32 :MICPEC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2131 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set Warning: unaligning (T0348)H65 because last residue in template chain is (1dl6A)K59 T0348 1 :MDAKFLEILVCPLCKGPLVFDK 1dl6A 5 :SRLDALPRVTCPNHPDAILVED T0348 23 :SKDELICKGDR 1dl6A 28 :RAGDMICPECG T0348 45 :MLESEARELAPEEEVKLEHH 1dl6A 39 :LVVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2134 Number of alignments=652 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDK 1dl6A 5 :SRLDALPRVTCPNHPDAILVED T0348 23 :SKDELICKGDRLA 1dl6A 28 :RAGDMICPECGLV T0348 47 :ESEARELAPEEEVKLEH 1dl6A 41 :VGDRVIDVGSEWRTFSN T0348 67 :HH 1dl6A 58 :DK Number of specific fragments extracted= 4 number of extra gaps= 0 total=2138 Number of alignments=653 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 1 :MDA 1dl6A 2 :AST T0348 8 :ILVCPLC 1dl6A 12 :RVTCPNH T0348 15 :KGPLVFDKSKDELICKGDRLAF 1dl6A 20 :DAILVEDYRAGDMICPECGLVV T0348 48 :S 1dl6A 42 :G T0348 50 :ARELA 1dl6A 43 :DRVID T0348 57 :EEVKLEHHHHHH 1dl6A 48 :VGSEWRTFSNDK Number of specific fragments extracted= 6 number of extra gaps= 0 total=2144 Number of alignments=654 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 1 :MDA 1dl6A 2 :AST T0348 10 :VCPLC 1dl6A 14 :TCPNH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1dl6A 20 :DAILVEDYRAGDMICPECGLVVG T0348 52 :ELAPE 1dl6A 45 :VIDVG T0348 59 :VKLEHHHHHH 1dl6A 50 :SEWRTFSNDK Number of specific fragments extracted= 5 number of extra gaps= 0 total=2149 Number of alignments=655 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 6 :LEILVCPLCKGPLVFDK 1dl6A 10 :LPRVTCPNHPDAILVED T0348 23 :SKDELICKGDRLA 1dl6A 28 :RAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2151 Number of alignments=656 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 6 :LEILVCPLCKGPLVFDK 1dl6A 10 :LPRVTCPNHPDAILVED T0348 23 :SKDELICKGDRLA 1dl6A 28 :RAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2153 Number of alignments=657 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 11 :CPLC 1dl6A 15 :CPNH T0348 15 :KGPLVFDKSKDELICKGDRLAF 1dl6A 20 :DAILVEDYRAGDMICPECGLVV T0348 48 :SE 1dl6A 42 :GD T0348 51 :RELAPEEEVKLEHHH 1dl6A 44 :RVIDVGSEWRTFSND Number of specific fragments extracted= 4 number of extra gaps= 0 total=2157 Number of alignments=658 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 11 :CPLC 1dl6A 15 :CPNH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1dl6A 20 :DAILVEDYRAGDMICPECGLVVG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2159 Number of alignments=659 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set Warning: unaligning (T0348)H65 because last residue in template chain is (1dl6A)K59 T0348 1 :MDAKFLEILVCPLCKGPLVF 1dl6A 5 :SRLDALPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDR 1dl6A 26 :DYRAGDMICPECG T0348 45 :MLESEARELAPEEEVKLEHH 1dl6A 39 :LVVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2162 Number of alignments=660 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 1 :MDAKFLEILVCPLCKGPLVF 1dl6A 5 :SRLDALPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1dl6A 26 :DYRAGDMICPECGLV T0348 47 :ESEARELAPEEEVKLEH 1dl6A 41 :VGDRVIDVGSEWRTFSN T0348 67 :HH 1dl6A 58 :DK Number of specific fragments extracted= 4 number of extra gaps= 0 total=2166 Number of alignments=661 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 1 :MDAKFLEIL 1dl6A 2 :ASTSRLDAL T0348 10 :VCPLC 1dl6A 14 :TCPNH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1dl6A 20 :DAILVEDYRAGDMICPECGLVVG T0348 52 :ELAPEEEVKLEHHHHHH 1dl6A 43 :DRVIDVGSEWRTFSNDK Number of specific fragments extracted= 4 number of extra gaps= 0 total=2170 Number of alignments=662 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 1 :MDA 1dl6A 2 :AST T0348 11 :CPLC 1dl6A 15 :CPNH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1dl6A 20 :DAILVEDYRAGDMICPECGLVVG T0348 51 :RELAP 1dl6A 44 :RVIDV T0348 58 :EVKLEHHHHHH 1dl6A 49 :GSEWRTFSNDK Number of specific fragments extracted= 5 number of extra gaps= 0 total=2175 Number of alignments=663 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 6 :LEILVCPLCKGPLVF 1dl6A 10 :LPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1dl6A 26 :DYRAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2177 Number of alignments=664 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 6 :LEILVCPLCKGPLVF 1dl6A 10 :LPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1dl6A 26 :DYRAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2179 Number of alignments=665 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 10 :VCPLC 1dl6A 14 :TCPNH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1dl6A 20 :DAILVEDYRAGDMICPECGLVVG T0348 50 :ARELAPEEEVKLEHHH 1dl6A 43 :DRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2182 Number of alignments=666 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 11 :CPLC 1dl6A 15 :CPNH T0348 15 :KGPLVFDKSKDELICKGDRLAFP 1dl6A 20 :DAILVEDYRAGDMICPECGLVVG T0348 51 :RELAPEEEV 1dl6A 44 :RVIDVGSEW T0348 62 :EHHHHH 1dl6A 53 :RTFSND Number of specific fragments extracted= 4 number of extra gaps= 0 total=2186 Number of alignments=667 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1dl6A)K59 T0348 1 :MDAKFLEIL 1dl6A 2 :ASTSRLDAL T0348 10 :VCPLCKGPLVF 1dl6A 14 :TCPNHPDAILV T0348 21 :DKSKDELICKGDRL 1dl6A 26 :DYRAGDMICPECGL T0348 38 :IKDGIPMMLESEARELAPE 1dl6A 40 :VVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 4 number of extra gaps= 0 total=2190 Number of alignments=668 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1dl6A)K59 T0348 1 :MDAKFLEIL 1dl6A 2 :ASTSRLDAL T0348 10 :VCPLCKGPLVF 1dl6A 14 :TCPNHPDAILV T0348 21 :DKSKDELICKGDRLAFP 1dl6A 26 :DYRAGDMICPECGLVVG T0348 40 :DGI 1dl6A 43 :DRV T0348 44 :MMLESEARELAPE 1dl6A 46 :IDVGSEWRTFSND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2195 Number of alignments=669 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 1 :MDAKFLEIL 1dl6A 2 :ASTSRLDAL T0348 10 :VCPLCKGP 1dl6A 14 :TCPNHPDA T0348 18 :LVFDKSKDELICKGDRLAFP 1dl6A 23 :LVEDYRAGDMICPECGLVVG T0348 52 :ELAPEEEVKLEHHHHHH 1dl6A 43 :DRVIDVGSEWRTFSNDK Number of specific fragments extracted= 4 number of extra gaps= 0 total=2199 Number of alignments=670 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 1 :M 1dl6A 2 :A T0348 11 :CPLCKGP 1dl6A 15 :CPNHPDA T0348 18 :LVFDKSKDELICKGDRLAFP 1dl6A 23 :LVEDYRAGDMICPECGLVVG T0348 40 :DG 1dl6A 43 :DR T0348 54 :APEEEVKLEHHHHHH 1dl6A 45 :VIDVGSEWRTFSNDK Number of specific fragments extracted= 5 number of extra gaps= 0 total=2204 Number of alignments=671 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 6 :LEILVCPLCKGPLVF 1dl6A 10 :LPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1dl6A 26 :DYRAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2206 Number of alignments=672 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 6 :LEILVCPLCKGPLVF 1dl6A 10 :LPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1dl6A 26 :DYRAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2208 Number of alignments=673 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 11 :CPLCKGP 1dl6A 15 :CPNHPDA T0348 18 :LVFDKSKDELICKGDRLAFP 1dl6A 23 :LVEDYRAGDMICPECGLVVG T0348 40 :D 1dl6A 43 :D T0348 51 :RELAPEEEVK 1dl6A 44 :RVIDVGSEWR T0348 63 :HHHH 1dl6A 54 :TFSN Number of specific fragments extracted= 5 number of extra gaps= 0 total=2213 Number of alignments=674 # 1dl6A read from 1dl6A/merged-a2m # found chain 1dl6A in template set T0348 11 :CPLCK 1dl6A 15 :CPNHP T0348 16 :GPLVFDKSKDELICKGDRLAFP 1dl6A 21 :AILVEDYRAGDMICPECGLVVG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2215 Number of alignments=675 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vqoZ/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vqoZ/merged-a2m # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1vqoZ)S82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEAREL 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKPETPGGKTVRR Number of specific fragments extracted= 1 number of extra gaps= 0 total=2216 Number of alignments=676 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 1 :MDA 1vqoZ 10 :RSG T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 32 :EMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 41 :GIPMMLESEARELAPE 1vqoZ 66 :GGSYKPETPGGKTVRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2219 Number of alignments=677 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 1 :MDAKFLEILVCPLCKGPLV 1vqoZ 29 :IESEMNEDHACPNCGEDRV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2220 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 6 :LEILVCPLCKGPLVF 1vqoZ 34 :NEDHACPNCGEDRVD Number of specific fragments extracted= 1 number of extra gaps= 0 total=2221 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1vqoZ)S82 T0348 1 :MDAKF 1vqoZ 10 :RSGRF T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 34 :NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 41 :GIPMMLESEARELAPE 1vqoZ 66 :GGSYKPETPGGKTVRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2224 Number of alignments=678 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1vqoZ)S82 T0348 1 :MDAKF 1vqoZ 10 :RSGRF T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 34 :NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 41 :GIPMMLESEARELAPE 1vqoZ 66 :GGSYKPETPGGKTVRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2227 Number of alignments=679 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 1 :MDAKFLEILVCPLCKGPLV 1vqoZ 29 :IESEMNEDHACPNCGEDRV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2228 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 6 :LEILVCPLCKGPLVFDKSK 1vqoZ 34 :NEDHACPNCGEDRVDRQGT Number of specific fragments extracted= 1 number of extra gaps= 0 total=2229 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1vqoZ)S82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 41 :GIPMMLESEARELAPE 1vqoZ 66 :GGSYKPETPGGKTVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2231 Number of alignments=680 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 41 :GIPMMLESEARELAPE 1vqoZ 66 :GGSYKPETPGGKTVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2233 Number of alignments=681 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 1 :MDAKFLEILVCPLCKGPLV 1vqoZ 29 :IESEMNEDHACPNCGEDRV Number of specific fragments extracted= 1 number of extra gaps= 0 total=2234 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 6 :LEILVCPLCKGPLVFDK 1vqoZ 34 :NEDHACPNCGEDRVDRQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=2235 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 11 :CPLC 1vqoZ 39 :CPNC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2236 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 11 :CPLCKGPLVFDK 1vqoZ 39 :CPNCGEDRVDRQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=2237 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1vqoZ)S82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEAREL 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKPETPGGKTVRR Number of specific fragments extracted= 1 number of extra gaps= 0 total=2238 Number of alignments=682 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)E58 because last residue in template chain is (1vqoZ)S82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 46 :LESEARELAPEE 1vqoZ 70 :KPETPGGKTVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2240 Number of alignments=683 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 1 :MD 1vqoZ 10 :RS T0348 4 :KFLEI 1vqoZ 25 :RVAEI T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 38 :ACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 49 :EARELAPEEEVKLE 1vqoZ 68 :SYKPETPGGKTVRR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2244 Number of alignments=684 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 1 :M 1vqoZ 10 :R T0348 2 :DAKFLEILV 1vqoZ 19 :GRVSRRRVA T0348 11 :CPLC 1vqoZ 39 :CPNC T0348 15 :KGPLVFDKS 1vqoZ 44 :EDRVDRQGT T0348 25 :DELICKGDRLAFPIKDGIP 1vqoZ 53 :GIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKLE 1vqoZ 72 :ETPGGKTVRR Number of specific fragments extracted= 6 number of extra gaps= 0 total=2250 Number of alignments=685 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2251 Number of alignments=686 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1vqoZ 31 :SEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2252 Number of alignments=687 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 38 :ACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 48 :SEARELAPEEEVKLE 1vqoZ 67 :GSYKPETPGGKTVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2254 Number of alignments=688 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 10 :VCPLC 1vqoZ 38 :ACPNC T0348 15 :KGPLVFDKS 1vqoZ 44 :EDRVDRQGT T0348 25 :DELICKGDRLAFPIKDGIP 1vqoZ 53 :GIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKLE 1vqoZ 72 :ETPGGKTVRR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2258 Number of alignments=689 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1vqoZ)S82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEAREL 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKPETPGGKTVRR Number of specific fragments extracted= 1 number of extra gaps= 0 total=2259 Number of alignments=690 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)E58 because last residue in template chain is (1vqoZ)S82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 46 :LESEARELAPEE 1vqoZ 70 :KPETPGGKTVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2261 Number of alignments=691 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 1 :M 1vqoZ 10 :R T0348 3 :AKFLEILV 1vqoZ 20 :RVSRRRVA T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 39 :CPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 49 :EARELAPEEEVKLE 1vqoZ 68 :SYKPETPGGKTVRR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2265 Number of alignments=692 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 1 :M 1vqoZ 10 :R T0348 2 :DAKFLEILV 1vqoZ 19 :GRVSRRRVA T0348 11 :CPLC 1vqoZ 39 :CPNC T0348 15 :KGPLVFD 1vqoZ 44 :EDRVDRQ T0348 23 :SKDELICKGDRLAFPIKDGIP 1vqoZ 51 :GTGIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKLE 1vqoZ 72 :ETPGGKTVRR Number of specific fragments extracted= 6 number of extra gaps= 0 total=2271 Number of alignments=693 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2272 Number of alignments=694 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 3 :AKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1vqoZ 31 :SEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2273 Number of alignments=695 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 5 :FLEILVCPLCKGPLVFDKSKDELICKGDRLAFP 1vqoZ 33 :MNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFT T0348 48 :SEARELAPEEEVKLE 1vqoZ 67 :GSYKPETPGGKTVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2275 Number of alignments=696 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)H63 because last residue in template chain is (1vqoZ)S82 T0348 10 :VCPLC 1vqoZ 38 :ACPNC T0348 15 :KGPLVFD 1vqoZ 44 :EDRVDRQ T0348 23 :SKDELICKGDRLAFPIKDGIP 1vqoZ 51 :GTGIWQCSYCDYKFTGGSYKP T0348 53 :LAPEEEVKLE 1vqoZ 72 :ETPGGKTVRR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2279 Number of alignments=697 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)G41 because last residue in template chain is (1vqoZ)S82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF T0348 37 :PIKD 1vqoZ 78 :TVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2281 Number of alignments=698 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)E58 because last residue in template chain is (1vqoZ)S82 T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF T0348 48 :SEARELAPEE 1vqoZ 72 :ETPGGKTVRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2283 Number of alignments=699 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)A54 because last residue in template chain is (1vqoZ)S82 T0348 1 :M 1vqoZ 10 :R T0348 3 :AKFLEI 1vqoZ 24 :RRVAEI T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEAREL 1vqoZ 38 :ACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKPETPGGKTVRR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2286 Number of alignments=700 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set Warning: unaligning (T0348)E58 because last residue in template chain is (1vqoZ)S82 T0348 1 :M 1vqoZ 10 :R T0348 3 :AKFLEI 1vqoZ 24 :RRVAEI T0348 11 :CPLCKG 1vqoZ 39 :CPNCGE T0348 17 :PLVFDKS 1vqoZ 46 :RVDRQGT T0348 25 :DELICKGDRLAFPIKDGIPM 1vqoZ 53 :GIWQCSYCDYKFTGGSYKPE T0348 47 :ESEARE 1vqoZ 73 :TPGGKT T0348 55 :PEE 1vqoZ 79 :VRR Number of specific fragments extracted= 7 number of extra gaps= 0 total=2293 Number of alignments=701 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1vqoZ 29 :IESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2294 Number of alignments=702 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKGDRLAF 1vqoZ 32 :EMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2295 Number of alignments=703 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 4 :KFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPM 1vqoZ 32 :EMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKPE Number of specific fragments extracted= 1 number of extra gaps= 0 total=2296 Number of alignments=704 # 1vqoZ read from 1vqoZ/merged-a2m # found chain 1vqoZ in template set T0348 11 :CPLCKG 1vqoZ 39 :CPNCGE T0348 17 :PLVFDKS 1vqoZ 46 :RVDRQGT T0348 25 :DELICKGDRLAFPI 1vqoZ 53 :GIWQCSYCDYKFTG Number of specific fragments extracted= 3 number of extra gaps= 0 total=2299 Number of alignments=705 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1odhA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1odhA/merged-a2m # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 1 :MDAKFLEILV 1odhA 14 :LSWDINDVKL T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1odhA 113 :CPNCNGPLKLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPRPETKLEAEARRAMK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2301 Number of alignments=706 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 1 :MDAKF 1odhA 14 :LSWDI T0348 6 :LEILV 1odhA 77 :LGVVV T0348 11 :CPLCKGPLVF 1odhA 113 :CPNCNGPLKL T0348 27 :LICKGDR 1odhA 123 :IPCRGHG T0348 35 :AFP 1odhA 130 :GFP T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHH 1odhA 138 :RHDGRFIFFQSKGEHDHPRPETKLEAE T0348 65 :HHHH 1odhA 167 :RAMK Number of specific fragments extracted= 7 number of extra gaps= 0 total=2308 Number of alignments=707 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 11 :CPLCKGPLVF 1odhA 113 :CPNCNGPLKL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2309 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVF 1odhA 112 :SCPNCNGPLKL T0348 27 :LICKGDR 1odhA 123 :IPCRGHG T0348 35 :AFP 1odhA 130 :GFP T0348 38 :IKDGIPMMLESEARELAPEEEVKL 1odhA 138 :RHDGRFIFFQSKGEHDHPRPETKL Number of specific fragments extracted= 4 number of extra gaps= 0 total=2313 Number of alignments=708 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 1 :MDAKFLEILV 1odhA 14 :LSWDINDVKL T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1odhA 113 :CPNCNGPLKLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPRPETKLEAEARRAMK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2315 Number of alignments=709 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 1 :MDAKF 1odhA 14 :LSWDI T0348 6 :LEILV 1odhA 77 :LGVVV T0348 11 :CPLCKGPLVF 1odhA 113 :CPNCNGPLKL T0348 27 :LICKGDR 1odhA 123 :IPCRGHG T0348 35 :AFPIK 1odhA 130 :GFPVT T0348 40 :DGIPMMLESEARELAPEEEVKLE 1odhA 140 :DGRFIFFQSKGEHDHPRPETKLE T0348 63 :HHHHHH 1odhA 165 :ARRAMK Number of specific fragments extracted= 7 number of extra gaps= 0 total=2322 Number of alignments=710 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 11 :CPLCKGPLVF 1odhA 113 :CPNCNGPLKL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2323 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVF 1odhA 112 :SCPNCNGPLKL T0348 27 :LICKGDR 1odhA 123 :IPCRGHG T0348 35 :AFPI 1odhA 130 :GFPV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2326 Number of alignments=711 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 1 :MDAKFLEILV 1odhA 14 :LSWDINDVKL T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1odhA 113 :CPNCNGPLKLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPRPETKLEAEARRAMK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2328 Number of alignments=712 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 1 :MDAK 1odhA 14 :LSWD T0348 5 :FLEILVCP 1odhA 76 :CLGVVVCS T0348 13 :LCK 1odhA 88 :TEE T0348 16 :GPLVFDKSKD 1odhA 97 :RPAICDKARQ T0348 26 :ELICKGDR 1odhA 122 :LIPCRGHG T0348 35 :AFPI 1odhA 130 :GFPV T0348 39 :KDGIPMMLESEARELAPEEEVKLEH 1odhA 139 :HDGRFIFFQSKGEHDHPRPETKLEA T0348 64 :HHHHH 1odhA 166 :RRAMK Number of specific fragments extracted= 8 number of extra gaps= 0 total=2336 Number of alignments=713 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 11 :CPLCKGPLVF 1odhA 113 :CPNCNGPLKL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2337 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVF 1odhA 112 :SCPNCNGPLKL T0348 27 :LICKGDR 1odhA 123 :IPCRGHG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2339 Number of alignments=714 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 11 :CPLCKGPL 1odhA 113 :CPNCNGPL T0348 26 :ELICKGDRLAFPI 1odhA 121 :KLIPCRGHGGFPV T0348 39 :KDGIPMMLESEARELAPEEEVKLE 1odhA 139 :HDGRFIFFQSKGEHDHPRPETKLE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2342 Number of alignments=715 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVF 1odhA 112 :SCPNCNGPLKL T0348 27 :LICKGDR 1odhA 123 :IPCRGHG T0348 35 :AFPI 1odhA 130 :GFPV T0348 39 :KDGIPMMLESEARELAPEEEVKLEH 1odhA 139 :HDGRFIFFQSKGEHDHPRPETKLEA Number of specific fragments extracted= 4 number of extra gaps= 0 total=2346 Number of alignments=716 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1odhA)L14 T0348 10 :VCPLCKGPLVFDKSKDE 1odhA 15 :SWDINDVKLPQNVKTTD T0348 27 :LICKGDRLAFPIK 1odhA 122 :LIPCRGHGGFPVT T0348 40 :DGIPMMLESEARELAPEEEVKLEHHHHH 1odhA 140 :DGRFIFFQSKGEHDHPRPETKLEAEARR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2349 Number of alignments=717 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1odhA)L14 T0348 10 :VCPLCKGPLVFDKSK 1odhA 15 :SWDINDVKLPQNVKT T0348 27 :LICKGDRLAFPIK 1odhA 122 :LIPCRGHGGFPVT T0348 40 :DGIPMMLESEARELAPEEEVKLEHHHHH 1odhA 140 :DGRFIFFQSKGEHDHPRPETKLEAEARR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2352 Number of alignments=718 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1odhA)L14 Warning: unaligning (T0348)H65 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1odhA)K171 Warning: unaligning (T0348)H66 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1odhA)K171 T0348 10 :VCPLCKGPLVFDKSKD 1odhA 15 :SWDINDVKLPQNVKTT T0348 27 :LICKGDRLAF 1odhA 136 :FWRHDGRFIF T0348 46 :LESEARELAPEEEVKLEHH 1odhA 151 :EHDHPRPETKLEAEARRAM Number of specific fragments extracted= 3 number of extra gaps= 1 total=2355 Number of alignments=719 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 12 :PLCKGPLVF 1odhA 17 :DINDVKLPQ T0348 27 :LICKGDRLA 1odhA 80 :VVCSRDCST T0348 39 :KDGIPMML 1odhA 89 :EEGRKIYL T0348 50 :ARELAPEEEVKLEHHHHH 1odhA 97 :RPAICDKARQKQQRKSCP Number of specific fragments extracted= 4 number of extra gaps= 0 total=2359 Number of alignments=720 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 11 :CPLCKGPLVFDK 1odhA 113 :CPNCNGPLKLIP Number of specific fragments extracted= 1 number of extra gaps= 0 total=2360 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 11 :CPLCKGPLVFDKS 1odhA 113 :CPNCNGPLKLIPC T0348 31 :GDRLAFPI 1odhA 126 :RGHGGFPV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2362 Number of alignments=721 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVF 1odhA 112 :SCPNCNGPLKL T0348 21 :DKSKDE 1odhA 126 :RGHGGF T0348 27 :LICKGDRLAF 1odhA 136 :FWRHDGRFIF Number of specific fragments extracted= 3 number of extra gaps= 0 total=2365 Number of alignments=722 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVFDK 1odhA 112 :SCPNCNGPLKLIP T0348 24 :KDE 1odhA 129 :GGF T0348 27 :LICKGDRLAFP 1odhA 137 :WRHDGRFIFFQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2368 Number of alignments=723 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1odhA)L14 T0348 10 :VCPLCKGPLVF 1odhA 15 :SWDINDVKLPQ T0348 21 :DKSKDELICKGDRLAFPIK 1odhA 116 :CNGPLKLIPCRGHGGFPVT T0348 40 :DGIPMMLESEARELAPEEEVKLEHHHHH 1odhA 140 :DGRFIFFQSKGEHDHPRPETKLEAEARR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2371 Number of alignments=724 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1odhA)L14 T0348 10 :VCPLCKGP 1odhA 15 :SWDINDVK T0348 21 :DKSKDELICKGDRLAFPIK 1odhA 116 :CNGPLKLIPCRGHGGFPVT T0348 40 :DGIPMMLESEARELAPEEEVKLEHHHHH 1odhA 140 :DGRFIFFQSKGEHDHPRPETKLEAEARR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2374 Number of alignments=725 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1odhA)L14 Warning: unaligning (T0348)H65 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1odhA)K171 Warning: unaligning (T0348)H66 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1odhA)K171 T0348 10 :VCPLCKGPLVF 1odhA 15 :SWDINDVKLPQ T0348 22 :KSKDELICKGDRLAFPI 1odhA 117 :NGPLKLIPCRGHGGFPV T0348 40 :DGIPMM 1odhA 140 :DGRFIF T0348 46 :LESEARELAPEEEVKLEHH 1odhA 151 :EHDHPRPETKLEAEARRAM Number of specific fragments extracted= 4 number of extra gaps= 1 total=2378 Number of alignments=726 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1odhA)L14 Warning: unaligning (T0348)H65 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1odhA)K171 Warning: unaligning (T0348)H66 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1odhA)K171 T0348 10 :VCPLCKGPLVF 1odhA 15 :SWDINDVKLPQ T0348 26 :ELICKGDRLAFPIKDGIP 1odhA 136 :FWRHDGRFIFFQSKGEHD T0348 50 :ARE 1odhA 154 :HPR T0348 53 :LAPEEEVKLEHH 1odhA 158 :ETKLEAEARRAM Number of specific fragments extracted= 4 number of extra gaps= 1 total=2382 Number of alignments=727 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 11 :CPLCKGPLVFDKSKDE 1odhA 113 :CPNCNGPLKLIPCRGH Number of specific fragments extracted= 1 number of extra gaps= 0 total=2383 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVFDKS 1odhA 112 :SCPNCNGPLKLIPC T0348 31 :GDRLAFPI 1odhA 126 :RGHGGFPV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2385 Number of alignments=728 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 7 :EILVCPLCKGPLVF 1odhA 109 :QRKSCPNCNGPLKL T0348 27 :LICKGDR 1odhA 123 :IPCRGHG T0348 35 :AFP 1odhA 130 :GFP Number of specific fragments extracted= 3 number of extra gaps= 0 total=2388 Number of alignments=729 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVFDK 1odhA 112 :SCPNCNGPLKLIP T0348 29 :CKG 1odhA 125 :CRG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2390 Number of alignments=730 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set Warning: unaligning (T0348)L18 because first residue in template chain is (1odhA)L14 T0348 19 :VFDKSKDELICKGDRLAF 1odhA 15 :SWDINDVKLPQNVKTTDW T0348 39 :KDGIPMMLESEARELAPEEEVKLEHHHHHH 1odhA 33 :FQEWPDSYVKHIYSSDDRNAQRHLSSWAMR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2392 Number of alignments=731 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set Warning: unaligning (T0348)L18 because first residue in template chain is (1odhA)L14 T0348 19 :VFDKS 1odhA 15 :SWDIN Number of specific fragments extracted= 1 number of extra gaps= 0 total=2393 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set Warning: unaligning (T0348)L9 because first residue in template chain is (1odhA)L14 T0348 10 :VCPLCKGPLVFDKS 1odhA 15 :SWDINDVKLPQNVK T0348 27 :LICKGDRL 1odhA 80 :VVCSRDCS T0348 38 :IKDGIPMM 1odhA 88 :TEEGRKIY T0348 46 :LESEARELAPEEEVKLE 1odhA 100 :ICDKARQKQQRKSCPNC T0348 66 :HHH 1odhA 117 :NGP Number of specific fragments extracted= 5 number of extra gaps= 0 total=2398 Number of alignments=732 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 12 :PLCKGPLVFDKS 1odhA 37 :PDSYVKHIYSSD T0348 24 :KDELICKGDRLA 1odhA 77 :LGVVVCSRDCST T0348 39 :KDG 1odhA 89 :EEG T0348 42 :IPMMLESEAREL 1odhA 97 :RPAICDKARQKQ T0348 59 :VKLEHHHHHH 1odhA 109 :QRKSCPNCNG Number of specific fragments extracted= 5 number of extra gaps= 0 total=2403 Number of alignments=733 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 11 :CPLCKGPLVF 1odhA 113 :CPNCNGPLKL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2404 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVFDK 1odhA 112 :SCPNCNGPLKLIP T0348 30 :KGDRLAFPI 1odhA 125 :CRGHGGFPV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2406 Number of alignments=734 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 10 :VCPLCKGPLVFD 1odhA 112 :SCPNCNGPLKLI T0348 28 :ICKGDR 1odhA 124 :PCRGHG T0348 41 :GIP 1odhA 130 :GFP Number of specific fragments extracted= 3 number of extra gaps= 0 total=2409 Number of alignments=735 # 1odhA read from 1odhA/merged-a2m # found chain 1odhA in template set T0348 11 :CPLCKGPLVFDK 1odhA 113 :CPNCNGPLKLIP T0348 40 :DGIP 1odhA 129 :GGFP Number of specific fragments extracted= 2 number of extra gaps= 0 total=2411 Number of alignments=736 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1faq/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1faq expands to /projects/compbio/data/pdb/1faq.pdb.gz 1faq:Warning: there is no chain 1faq will retry with 1faqA # T0348 read from 1faq/merged-a2m # 1faq read from 1faq/merged-a2m # adding 1faq to template set # found chain 1faq in template set Warning: unaligning (T0348)R51 because last residue in template chain is (1faq)W187 T0348 1 :MDAKFLEILVCPLCKGPLV 1faq 142 :ARKTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAFPIKDGIPMMLESEA 1faq 161 :NGFRCQTCGYKFHEHCSTKVPTMCVD Number of specific fragments extracted= 2 number of extra gaps= 0 total=2413 Number of alignments=737 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 1 :MDAKFLEILVCPLCKGPLV 1faq 142 :ARKTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAFPIKDG 1faq 161 :NGFRCQTCGYKFHEHCS T0348 42 :IP 1faq 180 :VP Number of specific fragments extracted= 3 number of extra gaps= 0 total=2416 Number of alignments=738 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 5 :FLEILVCPLCKGPLV 1faq 146 :FLKLAFCDICQKFLL T0348 25 :DELICK 1faq 161 :NGFRCQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=2418 Number of alignments=739 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 4 :KFLEILVCPLCKGPLV 1faq 145 :TFLKLAFCDICQKFLL T0348 25 :DELICK 1faq 161 :NGFRCQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=2420 Number of alignments=740 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 1 :MD 1faq 136 :LT T0348 3 :AKFLEILVCPLCKGPLV 1faq 144 :KTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAF 1faq 161 :NGFRCQTCGYKF T0348 37 :PIKDGIPMML 1faq 175 :HCSTKVPTMC Number of specific fragments extracted= 4 number of extra gaps= 0 total=2424 Number of alignments=741 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 4 :KFLEILVCPLCKGPLV 1faq 145 :TFLKLAFCDICQKFLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2425 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 5 :FLEILVCPLCKGPLV 1faq 146 :FLKLAFCDICQKFLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2426 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 4 :KFLEILVCPLCKGPLV 1faq 145 :TFLKLAFCDICQKFLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2427 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set Warning: unaligning (T0348)E49 because last residue in template chain is (1faq)W187 T0348 1 :MDAKFLEILVCPLCKGPLV 1faq 142 :ARKTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH T0348 38 :IKDGIPMMLES 1faq 176 :CSTKVPTMCVD Number of specific fragments extracted= 3 number of extra gaps= 0 total=2430 Number of alignments=742 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 1 :MDAKFLEILVCPLCKGPLV 1faq 142 :ARKTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH T0348 38 :IKDGIPMMLES 1faq 176 :CSTKVPTMCVD Number of specific fragments extracted= 3 number of extra gaps= 0 total=2433 Number of alignments=743 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 1 :MDA 1faq 136 :LTT T0348 10 :VCPLCKGPLV 1faq 151 :FCDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH T0348 55 :PEEEVKLEHHHHHH 1faq 174 :EHCSTKVPTMCVDW Number of specific fragments extracted= 4 number of extra gaps= 0 total=2437 Number of alignments=744 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 1 :MDA 1faq 136 :LTT T0348 11 :CPLCKGPLV 1faq 152 :CDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH T0348 38 :IKDGI 1faq 176 :CSTKV T0348 62 :EHHHHHH 1faq 181 :PTMCVDW Number of specific fragments extracted= 5 number of extra gaps= 0 total=2442 Number of alignments=745 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 3 :AKFLEILVCPLCKGPLV 1faq 144 :KTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAF 1faq 161 :NGFRCQTCGYKF Number of specific fragments extracted= 2 number of extra gaps= 0 total=2444 Number of alignments=746 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 3 :AKFLEILVCPLCKGPLV 1faq 144 :KTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAF 1faq 161 :NGFRCQTCGYKF Number of specific fragments extracted= 2 number of extra gaps= 0 total=2446 Number of alignments=747 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 11 :CPLCKGPLV 1faq 152 :CDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH T0348 38 :IKDGIPMMLE 1faq 176 :CSTKVPTMCV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2449 Number of alignments=748 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 11 :CPLCKGPLV 1faq 152 :CDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH Number of specific fragments extracted= 2 number of extra gaps= 0 total=2451 Number of alignments=749 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set Warning: unaligning (T0348)E49 because last residue in template chain is (1faq)W187 T0348 1 :MDAKFLEILVCPLCKGPLV 1faq 142 :ARKTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH T0348 38 :IKDGIPMMLES 1faq 176 :CSTKVPTMCVD Number of specific fragments extracted= 3 number of extra gaps= 0 total=2454 Number of alignments=750 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 1 :MDAKFLEILVCPLCKGPLV 1faq 142 :ARKTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH T0348 38 :IKDGIPMMLES 1faq 176 :CSTKVPTMCVD Number of specific fragments extracted= 3 number of extra gaps= 0 total=2457 Number of alignments=751 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 1 :MDA 1faq 136 :LTT T0348 4 :KFLEILVCPLCKGPLV 1faq 145 :TFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAF 1faq 161 :NGFRCQTCGYKF T0348 54 :APEEEVKLEHHHHHH 1faq 173 :HEHCSTKVPTMCVDW Number of specific fragments extracted= 4 number of extra gaps= 0 total=2461 Number of alignments=752 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 1 :MDA 1faq 136 :LTT T0348 11 :CPLCKGPL 1faq 152 :CDICQKFL T0348 24 :KDELICKGDRLAFP 1faq 160 :LNGFRCQTCGYKFH T0348 56 :EEEVKLEHHHHHH 1faq 175 :HCSTKVPTMCVDW Number of specific fragments extracted= 4 number of extra gaps= 0 total=2465 Number of alignments=753 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 3 :AKFLEILVCPLCKGPLV 1faq 144 :KTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAF 1faq 161 :NGFRCQTCGYKF Number of specific fragments extracted= 2 number of extra gaps= 0 total=2467 Number of alignments=754 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 3 :AKFLEILVCPLCKGPLV 1faq 144 :KTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAF 1faq 161 :NGFRCQTCGYKF Number of specific fragments extracted= 2 number of extra gaps= 0 total=2469 Number of alignments=755 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 10 :VCPLCKGPLV 1faq 151 :FCDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH T0348 38 :IKDGIPMM 1faq 176 :CSTKVPTM Number of specific fragments extracted= 3 number of extra gaps= 0 total=2472 Number of alignments=756 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 11 :CPLCKGPL 1faq 152 :CDICQKFL T0348 24 :KDELICKGDRLAFP 1faq 160 :LNGFRCQTCGYKFH Number of specific fragments extracted= 2 number of extra gaps= 0 total=2474 Number of alignments=757 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set Warning: unaligning (T0348)E49 because last residue in template chain is (1faq)W187 T0348 1 :M 1faq 136 :L T0348 2 :DAKFLEILVCPLCKGPLV 1faq 143 :RKTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAF 1faq 161 :NGFRCQTCGYKF T0348 37 :PIKDGIPMMLES 1faq 175 :HCSTKVPTMCVD Number of specific fragments extracted= 4 number of extra gaps= 0 total=2478 Number of alignments=758 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set Warning: unaligning (T0348)E49 because last residue in template chain is (1faq)W187 T0348 1 :M 1faq 136 :L T0348 2 :DAKFLEILVCPLCKGPLV 1faq 143 :RKTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH T0348 38 :IKDGIPMMLES 1faq 176 :CSTKVPTMCVD Number of specific fragments extracted= 4 number of extra gaps= 0 total=2482 Number of alignments=759 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 1 :MD 1faq 136 :LT T0348 11 :CPLCKGPLV 1faq 152 :CDICQKFLL T0348 25 :DELICKGDRLAF 1faq 161 :NGFRCQTCGYKF T0348 54 :APEEEVKLEHHHHHH 1faq 173 :HEHCSTKVPTMCVDW Number of specific fragments extracted= 4 number of extra gaps= 0 total=2486 Number of alignments=760 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 1 :MD 1faq 136 :LT T0348 11 :CPLCKGPL 1faq 152 :CDICQKFL T0348 24 :KDELICKGDRLAFP 1faq 160 :LNGFRCQTCGYKFH T0348 55 :PEEEVKLEHHHHHH 1faq 174 :EHCSTKVPTMCVDW Number of specific fragments extracted= 4 number of extra gaps= 0 total=2490 Number of alignments=761 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 2 :DAKFLEILVCPLCKGPLV 1faq 143 :RKTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAF 1faq 161 :NGFRCQTCGYKF Number of specific fragments extracted= 2 number of extra gaps= 0 total=2492 Number of alignments=762 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 3 :AKFLEILVCPLCKGPLV 1faq 144 :KTFLKLAFCDICQKFLL T0348 25 :DELICKGDRLAF 1faq 161 :NGFRCQTCGYKF Number of specific fragments extracted= 2 number of extra gaps= 0 total=2494 Number of alignments=763 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 11 :CPLCKGPLV 1faq 152 :CDICQKFLL T0348 25 :DELICKGDRLAFP 1faq 161 :NGFRCQTCGYKFH T0348 38 :IKDGIPMML 1faq 176 :CSTKVPTMC Number of specific fragments extracted= 3 number of extra gaps= 0 total=2497 Number of alignments=764 # 1faq read from 1faq/merged-a2m # found chain 1faq in template set T0348 11 :CPLCKGPL 1faq 152 :CDICQKFL T0348 24 :KDELICKGDRLAFP 1faq 160 :LNGFRCQTCGYKFH T0348 38 :IKDGIPM 1faq 176 :CSTKVPT Number of specific fragments extracted= 3 number of extra gaps= 0 total=2500 Number of alignments=765 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1rlyA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1rlyA/merged-a2m # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1rlyA)K59 T0348 1 :MDAKFLEILVCPLCKGP 1rlyA 5 :SRLDALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKGDRL 1rlyA 23 :LVEDYRAGDMICPECGL T0348 38 :IKDGIPMMLESEARELAPE 1rlyA 40 :VVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2503 Number of alignments=766 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)E57 because last residue in template chain is (1rlyA)K59 T0348 3 :A 1rlyA 6 :R T0348 4 :KFLEILVCPLCKGP 1rlyA 8 :DALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKGDRL 1rlyA 23 :LVEDYRAGDMICPECGL T0348 37 :PIKDGI 1rlyA 40 :VVGDRV T0348 44 :MMLESEARELAPE 1rlyA 46 :IDVGSEWRTFSND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2508 Number of alignments=767 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 8 :ILVCPLCKGP 1rlyA 12 :RVTCPNHPDA T0348 18 :LVFDKSKDELICKG 1rlyA 23 :LVEDYRAGDMICPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2510 Number of alignments=768 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 5 :FLEILVCPLCKGP 1rlyA 9 :ALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKG 1rlyA 23 :LVEDYRAGDMICPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2512 Number of alignments=769 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1rlyA)K59 T0348 1 :MDAKFLEILVCPLCKGP 1rlyA 5 :SRLDALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKGDRL 1rlyA 23 :LVEDYRAGDMICPECGL T0348 38 :IKDGIPMMLESEARELAPE 1rlyA 40 :VVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2515 Number of alignments=770 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1rlyA)K59 T0348 1 :MDA 1rlyA 2 :AST T0348 4 :KFLEILVCPLCKGP 1rlyA 8 :DALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKGDRL 1rlyA 23 :LVEDYRAGDMICPECGL T0348 37 :PIKDGI 1rlyA 40 :VVGDRV T0348 44 :MMLESEARELAPE 1rlyA 46 :IDVGSEWRTFSND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2520 Number of alignments=771 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 1 :MDAKFLEILVCPLCKGP 1rlyA 5 :SRLDALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKG 1rlyA 23 :LVEDYRAGDMICPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2522 Number of alignments=772 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 4 :KFLEILVCPLCKGP 1rlyA 8 :DALPRVTCPNHPDA T0348 18 :LVFDKSKDELICKG 1rlyA 23 :LVEDYRAGDMICPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2524 Number of alignments=773 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1rlyA)K59 T0348 1 :MDAKFLEILVCPLCKG 1rlyA 5 :SRLDALPRVTCPNHPD T0348 17 :PLVFDKSKDELICKGDRL 1rlyA 22 :ILVEDYRAGDMICPECGL T0348 38 :IKDGIPMMLESEARELAPE 1rlyA 40 :VVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2527 Number of alignments=774 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1rlyA)K59 T0348 1 :M 1rlyA 2 :A T0348 2 :DAKFLEILVCPLCKG 1rlyA 6 :RLDALPRVTCPNHPD T0348 17 :PLVFDKSKDELICKGDRL 1rlyA 22 :ILVEDYRAGDMICPECGL T0348 37 :PIKDGI 1rlyA 40 :VVGDRV T0348 44 :MMLESEARELAPE 1rlyA 46 :IDVGSEWRTFSND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2532 Number of alignments=775 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 7 :EILVCPLCKG 1rlyA 11 :PRVTCPNHPD T0348 17 :PLVFDKSKDELICKG 1rlyA 22 :ILVEDYRAGDMICPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2534 Number of alignments=776 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 6 :LEILVCPLCKG 1rlyA 10 :LPRVTCPNHPD T0348 17 :PLVFDKSKDELICKG 1rlyA 22 :ILVEDYRAGDMICPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2536 Number of alignments=777 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 9 :LVCPLC 1rlyA 32 :MICPEC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2537 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 9 :LVCPLC 1rlyA 32 :MICPEC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2538 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)H65 because last residue in template chain is (1rlyA)K59 T0348 3 :A 1rlyA 3 :S T0348 4 :KFLEILVCPLCKGPLVFDK 1rlyA 8 :DALPRVTCPNHPDAILVED T0348 23 :SKDELICKGDR 1rlyA 28 :RAGDMICPECG T0348 45 :MLESEARELAPEEEVKLEHH 1rlyA 39 :LVVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 4 number of extra gaps= 0 total=2542 Number of alignments=778 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)H66 because last residue in template chain is (1rlyA)K59 T0348 3 :A 1rlyA 3 :S T0348 4 :KFLEILVCPLCKGPLVFDK 1rlyA 8 :DALPRVTCPNHPDAILVED T0348 23 :SKDELICKGDRLA 1rlyA 28 :RAGDMICPECGLV T0348 47 :ESEARELAPEEEVK 1rlyA 41 :VGDRVIDVGSEWRT T0348 62 :EHHH 1rlyA 55 :FSND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2547 Number of alignments=779 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)H66 because last residue in template chain is (1rlyA)K59 T0348 3 :A 1rlyA 3 :S T0348 9 :LVCPLCKGPLVF 1rlyA 13 :VTCPNHPDAILV T0348 21 :DKSKDELICKGDRLAF 1rlyA 26 :DYRAGDMICPECGLVV T0348 48 :S 1rlyA 42 :G T0348 50 :ARELAPEEEVKLEHHH 1rlyA 43 :DRVIDVGSEWRTFSND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2552 Number of alignments=780 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)H67 because last residue in template chain is (1rlyA)K59 T0348 3 :A 1rlyA 3 :S T0348 10 :VCPLCKGP 1rlyA 14 :TCPNHPDA T0348 18 :LVFDKSKDELICKGDRLA 1rlyA 23 :LVEDYRAGDMICPECGLV T0348 52 :ELAPEEEVKL 1rlyA 45 :VIDVGSEWRT T0348 63 :HHHH 1rlyA 55 :FSND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2557 Number of alignments=781 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 6 :LEILVCPLCKGPLVFDK 1rlyA 10 :LPRVTCPNHPDAILVED T0348 23 :SKDELICKGDRLA 1rlyA 28 :RAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2559 Number of alignments=782 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 6 :LEILVCPLCKGPLVFDK 1rlyA 10 :LPRVTCPNHPDAILVED T0348 23 :SKDELICKGDRLA 1rlyA 28 :RAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2561 Number of alignments=783 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)H66 because last residue in template chain is (1rlyA)K59 T0348 11 :CPLCKGPLVF 1rlyA 15 :CPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1rlyA 26 :DYRAGDMICPECGLV T0348 47 :ESE 1rlyA 41 :VGD T0348 51 :RELAPEEEVKLEHHH 1rlyA 44 :RVIDVGSEWRTFSND Number of specific fragments extracted= 4 number of extra gaps= 0 total=2565 Number of alignments=784 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 11 :CPLC 1rlyA 15 :CPNH T0348 15 :KGPLVFDKSKDELICKGDRLA 1rlyA 20 :DAILVEDYRAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2567 Number of alignments=785 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)H65 because last residue in template chain is (1rlyA)K59 T0348 3 :A 1rlyA 3 :S T0348 4 :KFLEILVCPLCKGPLVF 1rlyA 8 :DALPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDR 1rlyA 26 :DYRAGDMICPECG T0348 45 :MLESEARELAPEEEVKLEHH 1rlyA 39 :LVVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 4 number of extra gaps= 0 total=2571 Number of alignments=786 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)H66 because last residue in template chain is (1rlyA)K59 T0348 3 :A 1rlyA 3 :S T0348 4 :KFLEILVCPLCKGPLVF 1rlyA 8 :DALPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1rlyA 26 :DYRAGDMICPECGLV T0348 47 :ESEARELAPEEEVKL 1rlyA 41 :VGDRVIDVGSEWRTF T0348 63 :HHH 1rlyA 56 :SND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2576 Number of alignments=787 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)H66 because last residue in template chain is (1rlyA)K59 T0348 1 :MDAKFLEIL 1rlyA 2 :ASTSRLDAL T0348 10 :VCPLCKGPLVF 1rlyA 14 :TCPNHPDAILV T0348 21 :DKSKDELICKGDRLAF 1rlyA 26 :DYRAGDMICPECGLVV T0348 48 :S 1rlyA 42 :G T0348 50 :ARELAPEEEVKLEHHH 1rlyA 43 :DRVIDVGSEWRTFSND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2581 Number of alignments=788 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)H67 because last residue in template chain is (1rlyA)K59 T0348 3 :A 1rlyA 3 :S T0348 10 :VCPLC 1rlyA 14 :TCPNH T0348 15 :KGPLVFDKSKDELICKGDRLA 1rlyA 20 :DAILVEDYRAGDMICPECGLV T0348 51 :RELAPEEEVK 1rlyA 44 :RVIDVGSEWR T0348 62 :EHHHH 1rlyA 54 :TFSND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2586 Number of alignments=789 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 6 :LEILVCPLCKGPLVF 1rlyA 10 :LPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1rlyA 26 :DYRAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2588 Number of alignments=790 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 6 :LEILVCPLCKGPLVF 1rlyA 10 :LPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1rlyA 26 :DYRAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2590 Number of alignments=791 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)H65 because last residue in template chain is (1rlyA)K59 T0348 10 :VCPLCKGPLVF 1rlyA 14 :TCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1rlyA 26 :DYRAGDMICPECGLV T0348 47 :ESEARELAPEEEVKLEHH 1rlyA 41 :VGDRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2593 Number of alignments=792 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 11 :CPLC 1rlyA 15 :CPNH T0348 15 :KGPLVFDKSKDELICKGDRLAF 1rlyA 20 :DAILVEDYRAGDMICPECGLVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2595 Number of alignments=793 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)E57 because last residue in template chain is (1rlyA)K59 T0348 2 :DAKFLEILVCPLCKGPLVF 1rlyA 6 :RLDALPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRL 1rlyA 26 :DYRAGDMICPECGL T0348 38 :IKDGIPMMLESEARELAPE 1rlyA 40 :VVGDRVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2598 Number of alignments=794 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)E57 because last residue in template chain is (1rlyA)K59 T0348 3 :A 1rlyA 3 :S T0348 4 :KFLEILVCPLCKGPLVF 1rlyA 8 :DALPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLAFP 1rlyA 26 :DYRAGDMICPECGLVVG T0348 40 :DGI 1rlyA 43 :DRV T0348 44 :MMLESEARELAPE 1rlyA 46 :IDVGSEWRTFSND Number of specific fragments extracted= 5 number of extra gaps= 0 total=2603 Number of alignments=795 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)H67 because last residue in template chain is (1rlyA)K59 T0348 3 :AK 1rlyA 3 :ST T0348 9 :LVCPLCKGPLVF 1rlyA 13 :VTCPNHPDAILV T0348 21 :DKSKDELICKGDRLAFP 1rlyA 26 :DYRAGDMICPECGLVVG T0348 51 :RELAPEEEVKLEHHHH 1rlyA 43 :DRVIDVGSEWRTFSND Number of specific fragments extracted= 4 number of extra gaps= 0 total=2607 Number of alignments=796 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)D2 because first residue in template chain is (1rlyA)A2 Warning: unaligning (T0348)H67 because last residue in template chain is (1rlyA)K59 T0348 11 :CPLCKGP 1rlyA 15 :CPNHPDA T0348 18 :LVFDKSKDELICKGDRLA 1rlyA 23 :LVEDYRAGDMICPECGLV T0348 52 :ELAPEEEVKLEHHHH 1rlyA 44 :RVIDVGSEWRTFSND Number of specific fragments extracted= 3 number of extra gaps= 0 total=2610 Number of alignments=797 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 6 :LEILVCPLCKGPLVF 1rlyA 10 :LPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1rlyA 26 :DYRAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2612 Number of alignments=798 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 6 :LEILVCPLCKGPLVF 1rlyA 10 :LPRVTCPNHPDAILV T0348 21 :DKSKDELICKGDRLA 1rlyA 26 :DYRAGDMICPECGLV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2614 Number of alignments=799 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set Warning: unaligning (T0348)H66 because last residue in template chain is (1rlyA)K59 T0348 11 :CPLCKGPLVF 1rlyA 15 :CPNHPDAILV T0348 21 :DKSKDELICKGDRLAFP 1rlyA 26 :DYRAGDMICPECGLVVG T0348 40 :D 1rlyA 43 :D T0348 51 :RELAPEEEVKLEHHH 1rlyA 44 :RVIDVGSEWRTFSND Number of specific fragments extracted= 4 number of extra gaps= 0 total=2618 Number of alignments=800 # 1rlyA read from 1rlyA/merged-a2m # found chain 1rlyA in template set T0348 11 :CPLCKGP 1rlyA 15 :CPNHPDA T0348 18 :LVFDKSKDELICKGDRLAF 1rlyA 23 :LVEDYRAGDMICPECGLVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2620 Number of alignments=801 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1hvyA/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1hvyA expands to /projects/compbio/data/pdb/1hvy.pdb.gz 1hvyA:# T0348 read from 1hvyA/merged-a2m # 1hvyA read from 1hvyA/merged-a2m # adding 1hvyA to template set # found chain 1hvyA in template set Warning: unaligning (T0348)C14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :M 1hvyA 27 :P T0348 2 :DAKFLEILVCPL 1hvyA 30 :ELQYLGQIQHIL T0348 17 :PLVFDKSK 1hvyA 45 :VRKDDRTG T0348 25 :DELI 1hvyA 71 :FPLL T0348 30 :KGDRLAFPI 1hvyA 93 :KGSTNAKEL T0348 39 :KD 1hvyA 204 :VN T0348 41 :GIPMMLESEARELA 1hvyA 264 :PLKIQLQREPRPFP T0348 55 :PEEEVKLEHHHHH 1hvyA 292 :KAEDFQIEGYNPH Number of specific fragments extracted= 8 number of extra gaps= 0 total=2628 Number of alignments=802 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Number of specific fragments extracted= 0 number of extra gaps= 0 total=2628 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)A3 because first residue in template chain is (1hvyA)P26 T0348 4 :KFLEILVCPLCKG 1hvyA 27 :PHGELQYLGQIQH T0348 17 :PLVFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPE 1hvyA 72 :PLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDA T0348 57 :EEVKLEHHHHHH 1hvyA 294 :EDFQIEGYNPHP Number of specific fragments extracted= 3 number of extra gaps= 0 total=2631 Number of alignments=803 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)C14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 3 :AKFLEILVCPL 1hvyA 31 :LQYLGQIQHIL T0348 17 :PLVFDKSKDELIC 1hvyA 45 :VRKDDRTGTGTLS T0348 30 :KGDRLAFPIKDGIPMM 1hvyA 59 :FGMQARYSLRDEFPLL T0348 46 :LESEARELA 1hvyA 269 :LQREPRPFP T0348 55 :PEEEVKLEHHHHHH 1hvyA 292 :KAEDFQIEGYNPHP Number of specific fragments extracted= 5 number of extra gaps= 0 total=2636 Number of alignments=804 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELIC 1hvyA 187 :LPLMALPPCHALCQFYVVNSELSC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2637 Number of alignments=805 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 31 :GDRLAFPIKDGIPM 1hvyA 60 :GMQARYSLRDEFPL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2638 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEA 1hvyA 182 :WNPRDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYA T0348 51 :RELAPEEEVKLEHHHHHH 1hvyA 235 :YMIAHITGLKPGDFIHTL Number of specific fragments extracted= 2 number of extra gaps= 0 total=2640 Number of alignments=806 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)C14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)G16 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MDAKFLEILVCPL 1hvyA 29 :GELQYLGQIQHIL T0348 17 :PLVFDKSKDE 1hvyA 45 :VRKDDRTGTG T0348 27 :LICKGDRLAFPIKDGIPMMLE 1hvyA 56 :LSVFGMQARYSLRDEFPLLTT T0348 48 :SEARE 1hvyA 112 :NGSRD T0348 53 :LA 1hvyA 237 :IA T0348 55 :PEEEVKLEHHHHHH 1hvyA 292 :KAEDFQIEGYNPHP Number of specific fragments extracted= 6 number of extra gaps= 0 total=2646 Number of alignments=807 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 2 :DAKFLEILVCPLCKGPLVFDKSKDELIC 1hvyA 183 :NPRDLPLMALPPCHALCQFYVVNSELSC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2647 Number of alignments=808 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 14 :CKGPLVFDKSKDELICK 1hvyA 195 :CHALCQFYVVNSELSCQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=2648 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEA 1hvyA 187 :LPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYA Number of specific fragments extracted= 1 number of extra gaps= 0 total=2649 Number of alignments=809 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESE 1hvyA 187 :LPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2650 Number of alignments=810 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MDAKFLEIL 1hvyA 33 :YLGQIQHIL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1hvyA 50 :RTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTN Number of specific fragments extracted= 3 number of extra gaps= 0 total=2653 Number of alignments=811 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MDAKFLEIL 1hvyA 33 :YLGQIQHIL T0348 13 :LCKGPLV 1hvyA 45 :VRKDDRT T0348 23 :SKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHH 1hvyA 52 :GTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGST Number of specific fragments extracted= 3 number of extra gaps= 0 total=2656 Number of alignments=812 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MD 1hvyA 26 :PP T0348 4 :KFLEIL 1hvyA 36 :QIQHIL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1hvyA 50 :RTGTGTLSVFGMQARYSLRDEFPLL T0348 50 :ARELA 1hvyA 103 :SKGVK T0348 56 :EEEVKLEHHHHHH 1hvyA 115 :RDFLDSLGFSTRE Number of specific fragments extracted= 6 number of extra gaps= 0 total=2662 Number of alignments=813 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)K15 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MD 1hvyA 26 :PP T0348 3 :AKFLEILV 1hvyA 31 :LQYLGQIQ T0348 16 :GPLVFDKSKDELICKGDRLAFPIKDGIPMM 1hvyA 45 :VRKDDRTGTGTLSVFGMQARYSLRDEFPLL T0348 48 :SEA 1hvyA 99 :KEL T0348 51 :RELAPEEEVKLEHHHHH 1hvyA 111 :ANGSRDFLDSLGFSTRE Number of specific fragments extracted= 5 number of extra gaps= 0 total=2667 Number of alignments=814 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 3 :AKFLEIL 1hvyA 35 :GQIQHIL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1hvyA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2670 Number of alignments=815 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 6 :LEIL 1hvyA 38 :QHIL T0348 13 :LCKGPL 1hvyA 45 :VRKDDR T0348 22 :KSKDELICKGDRLAFPIKDGIPMMLESEAR 1hvyA 51 :TGTGTLSVFGMQARYSLRDEFPLLTTKRVF Number of specific fragments extracted= 3 number of extra gaps= 0 total=2673 Number of alignments=816 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 5 :FLEIL 1hvyA 37 :IQHIL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1hvyA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2676 Number of alignments=817 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 22 :KSKDELICKGDRLAFPIKDGIPMM 1hvyA 51 :TGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2677 Number of alignments=818 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MDAKFLEIL 1hvyA 33 :YLGQIQHIL T0348 13 :LCKGPLVF 1hvyA 45 :VRKDDRTG T0348 21 :DKSKDELICKGDRLAFP 1hvyA 261 :HIEPLKIQLQREPRPFP T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHHH 1hvyA 281 :ILRKVEKIDDFKAEDFQIEGYNPHPTIKME Number of specific fragments extracted= 4 number of extra gaps= 0 total=2681 Number of alignments=819 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MDAKFLEIL 1hvyA 33 :YLGQIQHIL T0348 13 :LCKGPLVF 1hvyA 45 :VRKDDRTG T0348 21 :DKSKDELICKGDRLAFP 1hvyA 261 :HIEPLKIQLQREPRPFP T0348 39 :KDGIPMMLESEARELAP 1hvyA 285 :VEKIDDFKAEDFQIEGY T0348 57 :EEVKLEHHHHHH 1hvyA 302 :NPHPTIKMEMAV Number of specific fragments extracted= 5 number of extra gaps= 0 total=2686 Number of alignments=820 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MDA 1hvyA 26 :PPH T0348 4 :KFLEIL 1hvyA 36 :QIQHIL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 18 :L 1hvyA 56 :L T0348 36 :FP 1hvyA 276 :FP T0348 38 :IKDGIPMMLESEARELA 1hvyA 284 :KVEKIDDFKAEDFQIEG T0348 63 :HHHHH 1hvyA 301 :YNPHP Number of specific fragments extracted= 7 number of extra gaps= 0 total=2693 Number of alignments=821 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 1 :MD 1hvyA 26 :PP T0348 3 :AKFLEIL 1hvyA 31 :LQYLGQI T0348 12 :PLCKGPLVF 1hvyA 49 :DRTGTGTLS T0348 25 :DELICKGDR 1hvyA 277 :PKLRILRKV T0348 48 :SEARELAPEEEV 1hvyA 286 :EKIDDFKAEDFQ T0348 60 :KLEHHH 1hvyA 302 :NPHPTI Number of specific fragments extracted= 6 number of extra gaps= 0 total=2699 Number of alignments=822 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPM 1hvyA 187 :LPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2700 Number of alignments=823 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 7 :EIL 1hvyA 39 :HIL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEA 1hvyA 50 :RTGTGTLSVFGMQARYSLRDEFPLLTTKRV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2703 Number of alignments=824 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 5 :FLEIL 1hvyA 37 :IQHIL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 22 :KSKDELICKGDRLAFPIKDGIPMM 1hvyA 51 :TGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2706 Number of alignments=825 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 22 :KSKDELICKGDRLAFPIKDGIPMM 1hvyA 51 :TGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2707 Number of alignments=826 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MDAKFLE 1hvyA 26 :PPHGELQ T0348 8 :IL 1hvyA 40 :IL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1hvyA 50 :RTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTN Number of specific fragments extracted= 4 number of extra gaps= 0 total=2711 Number of alignments=827 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MDAKFLE 1hvyA 26 :PPHGELQ T0348 8 :IL 1hvyA 40 :IL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHHHH 1hvyA 50 :RTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTN Number of specific fragments extracted= 4 number of extra gaps= 0 total=2715 Number of alignments=828 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 1 :MD 1hvyA 26 :PP T0348 3 :AKFLEIL 1hvyA 35 :GQIQHIL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESE 1hvyA 50 :RTGTGTLSVFGMQARYSLRDEFPLLTTKR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2719 Number of alignments=829 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 1 :MD 1hvyA 26 :PP T0348 3 :AKFLEILV 1hvyA 31 :LQYLGQIQ T0348 16 :GPLVFDKSKDELICKGDRLAFPIKDGIPMM 1hvyA 45 :VRKDDRTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2722 Number of alignments=830 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 6 :LEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPM 1hvyA 187 :LPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPF Number of specific fragments extracted= 1 number of extra gaps= 0 total=2723 Number of alignments=831 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 8 :IL 1hvyA 40 :IL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMMLESEA 1hvyA 50 :RTGTGTLSVFGMQARYSLRDEFPLLTTKRV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2726 Number of alignments=832 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set Warning: unaligning (T0348)V10 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1hvyA)G44 Warning: unaligning (T0348)P12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1hvyA)G44 T0348 5 :FLEIL 1hvyA 37 :IQHIL T0348 13 :LCKGP 1hvyA 45 :VRKDD T0348 21 :DKSKDELICKGDRLAFPIKDGIPMM 1hvyA 50 :RTGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2729 Number of alignments=833 # 1hvyA read from 1hvyA/merged-a2m # found chain 1hvyA in template set T0348 22 :KSKDELICKGDRLAFPIKDGIPMM 1hvyA 51 :TGTGTLSVFGMQARYSLRDEFPLL Number of specific fragments extracted= 1 number of extra gaps= 0 total=2730 Number of alignments=834 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vk6A/merged-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0348 read from 1vk6A/merged-a2m # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 9 :LVCPLCKGPLVFDKSKDELICK 1vk6A 96 :KYCGYCGHEMYPSKTEWAMLCS T0348 31 :GDRLAFP 1vk6A 151 :NGVHTVL T0348 40 :DGIPMMLESEARELAPEEEVKLEHHHHHH 1vk6A 212 :DIVIDPKELLEANWYRYDDLPLLPPPGTV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2733 Number of alignments=835 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 9 :LVCPLCKGPLVFDKSKDELICK 1vk6A 96 :KYCGYCGHEMYPSKTEWAMLCS T0348 31 :GDRLAFP 1vk6A 151 :NGVHTVL T0348 40 :DGIPMMLESEARELAPEEEVKLEHHHHHH 1vk6A 212 :DIVIDPKELLEANWYRYDDLPLLPPPGTV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2736 Number of alignments=836 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELIC 1vk6A 98 :CGYCGHEMYPSKTEWAMLC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2737 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICK 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2738 Number of alignments=837 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDEL 1vk6A 124 :YPQIAPCIIVAIRRDDSILLAQHTRHR T0348 31 :GDRLAFP 1vk6A 151 :NGVHTVL T0348 38 :IKDGIPMMLESEARELAPEE 1vk6A 198 :QSLMTAFMAEYDSGDIVIDP T0348 58 :EVK 1vk6A 219 :ELL T0348 61 :LEHHHHHH 1vk6A 249 :VAMCRAEY Number of specific fragments extracted= 5 number of extra gaps= 0 total=2743 Number of alignments=838 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 1 :MDAKFLEILVCPLCKGPLVFDKSKDELICK 1vk6A 88 :LAEFYRSHKYCGYCGHEMYPSKTEWAMLCS T0348 31 :GDRLAFP 1vk6A 151 :NGVHTVL T0348 40 :DGIPMMLESEARELAPEEEVKL 1vk6A 212 :DIVIDPKELLEANWYRYDDLPL T0348 62 :EHHHHHH 1vk6A 250 :AMCRAEY Number of specific fragments extracted= 4 number of extra gaps= 0 total=2747 Number of alignments=839 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELIC 1vk6A 98 :CGYCGHEMYPSKTEWAMLC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2748 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGD 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHC Number of specific fragments extracted= 1 number of extra gaps= 0 total=2749 Number of alignments=840 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 1 :MDAKFLEILVCPLCKGP 1vk6A 181 :IKVKNLRYVTSQPWPFP T0348 23 :SKDELICKGDRLAFPIKDGIPM 1vk6A 198 :QSLMTAFMAEYDSGDIVIDPKE T0348 47 :ESEARELAPEEEVKLEHHHHHH 1vk6A 220 :LLEANWYRYDDLPLLPPPGTVA Number of specific fragments extracted= 3 number of extra gaps= 0 total=2752 Number of alignments=841 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 1 :MDAKFLEI 1vk6A 24 :PKGELPYG T0348 9 :LVCPLCK 1vk6A 96 :KYCGYCG T0348 16 :GPLVFDK 1vk6A 132 :IVAIRRD T0348 24 :KDELICKGDR 1vk6A 139 :DSILLAQHTR T0348 35 :AFPI 1vk6A 149 :HRNG T0348 39 :KDGIPMML 1vk6A 209 :DSGDIVID T0348 47 :ES 1vk6A 219 :EL T0348 49 :EARELAPEEEVKLEHHHHHH 1vk6A 222 :EANWYRYDDLPLLPPPGTVA Number of specific fragments extracted= 8 number of extra gaps= 0 total=2760 Number of alignments=842 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELICK 1vk6A 98 :CGYCGHEMYPSKTEWAMLCS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2761 Number of alignments=843 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELICKG 1vk6A 98 :CGYCGHEMYPSKTEWAMLCSH Number of specific fragments extracted= 1 number of extra gaps= 0 total=2762 Number of alignments=844 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)H68 because first residue in template chain is (1vk6A)H0 Number of specific fragments extracted= 0 number of extra gaps= 0 total=2762 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)H68 because first residue in template chain is (1vk6A)H0 Number of specific fragments extracted= 0 number of extra gaps= 0 total=2762 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)F5 because first residue in template chain is (1vk6A)H0 Warning: unaligning (T0348)H67 because last residue in template chain is (1vk6A)Y256 T0348 6 :LEILVCPLCKGPLVFDKSKDE 1vk6A 1 :MDRIIEKLDHGWWVVSHEQKL T0348 27 :LICKGDRL 1vk6A 221 :LEANWYRY T0348 40 :DGIPMMLESEARELAPEEEVKLEHHHH 1vk6A 229 :DDLPLLPPPGTVARRLIEDTVAMCRAE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2765 Number of alignments=845 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)F5 because first residue in template chain is (1vk6A)H0 Warning: unaligning (T0348)H67 because last residue in template chain is (1vk6A)Y256 T0348 6 :LEILVCPLCKGPLVFDKSKDE 1vk6A 1 :MDRIIEKLDHGWWVVSHEQKL T0348 31 :GDRLAFPIKDGIPMMLESEARELAPEEEVKLEHHHH 1vk6A 220 :LLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAE Number of specific fragments extracted= 2 number of extra gaps= 0 total=2767 Number of alignments=846 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)G16 because first residue in template chain is (1vk6A)H0 Warning: unaligning (T0348)H67 because last residue in template chain is (1vk6A)Y256 T0348 17 :PLVFDKSKDE 1vk6A 1 :MDRIIEKLDH T0348 31 :GDRLAFPIKDGIPMMLESEA 1vk6A 220 :LLEANWYRYDDLPLLPPPGT T0348 57 :EEVKLEHHHH 1vk6A 246 :EDTVAMCRAE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2770 Number of alignments=847 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 2 :DAKFLEIL 1vk6A 75 :DVGLFQLA T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERYY T0348 39 :KDGIPMML 1vk6A 150 :RNGVHTVL T0348 50 :ARELAPEEEVKLE 1vk6A 158 :AGFVEVGETLEQA Number of specific fragments extracted= 4 number of extra gaps= 0 total=2774 Number of alignments=848 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 98 :CGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2775 Number of alignments=849 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2776 Number of alignments=850 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2777 Number of alignments=851 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAFP 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERYY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2778 Number of alignments=852 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)F5 because first residue in template chain is (1vk6A)H0 Warning: unaligning (T0348)H67 because last residue in template chain is (1vk6A)Y256 T0348 6 :LEILVCPLCKGPLVF 1vk6A 1 :MDRIIEKLDHGWWVV T0348 21 :DKSKDELICKGDRLA 1vk6A 214 :VIDPKELLEANWYRY T0348 40 :DGIPMMLESEARELAPEEEVKLEHHHH 1vk6A 229 :DDLPLLPPPGTVARRLIEDTVAMCRAE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2781 Number of alignments=853 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)F5 because first residue in template chain is (1vk6A)H0 Warning: unaligning (T0348)H67 because last residue in template chain is (1vk6A)Y256 T0348 6 :LEILVCPLCK 1vk6A 1 :MDRIIEKLDH T0348 21 :DKSKDELICKGDR 1vk6A 214 :VIDPKELLEANWY T0348 38 :IKDGIPMMLESEARELAPEEEVKLEHHHH 1vk6A 227 :RYDDLPLLPPPGTVARRLIEDTVAMCRAE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2784 Number of alignments=854 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)P17 because first residue in template chain is (1vk6A)H0 Warning: unaligning (T0348)H67 because last residue in template chain is (1vk6A)Y256 T0348 18 :L 1vk6A 1 :M T0348 21 :DKSKDELIC 1vk6A 214 :VIDPKELLE T0348 33 :RLAFP 1vk6A 223 :ANWYR T0348 39 :KDGIPMMLESEARELAPEEEVKLEHHHH 1vk6A 228 :YDDLPLLPPPGTVARRLIEDTVAMCRAE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2788 Number of alignments=855 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)G16 because first residue in template chain is (1vk6A)H0 Warning: unaligning (T0348)H67 because last residue in template chain is (1vk6A)Y256 T0348 17 :PLVF 1vk6A 1 :MDRI T0348 21 :DKSKDELIC 1vk6A 214 :VIDPKELLE T0348 33 :RLAFPI 1vk6A 223 :ANWYRY T0348 40 :DGIPMMLESE 1vk6A 229 :DDLPLLPPPG T0348 50 :ARELAPEEEVKLEH 1vk6A 241 :ARRLIEDTVAMCRA T0348 66 :H 1vk6A 255 :E Number of specific fragments extracted= 6 number of extra gaps= 0 total=2794 Number of alignments=856 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 98 :CGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2795 Number of alignments=857 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2796 Number of alignments=858 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2797 Number of alignments=859 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2798 Number of alignments=860 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)C14 because first residue in template chain is (1vk6A)H0 T0348 15 :KGPLVFDKSKDELICKGDRLAFPIKDGIPM 1vk6A 1 :MDRIIEKLDHGWWVVSHEQKLWLPKGELPY T0348 45 :MLESEARELAPEEEVKLEHHHHHH 1vk6A 38 :LVGQRALQIGEWQGEPVWLVQQQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=2800 Number of alignments=861 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set Warning: unaligning (T0348)F5 because first residue in template chain is (1vk6A)H0 T0348 6 :LEILVCPLCKGP 1vk6A 1 :MDRIIEKLDHGW T0348 19 :VFDKSKDELICKGDRLAFP 1vk6A 13 :WVVSHEQKLWLPKGELPYG T0348 39 :KDGIPMMLESEARELAPEEEVKLEHHHHH 1vk6A 49 :WQGEPVWLVQQQRRHDMGSVRQVIDLDVG Number of specific fragments extracted= 3 number of extra gaps= 0 total=2803 Number of alignments=862 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 98 :CGYCGHEMYPSKTEWAMLCSHCRERY T0348 39 :KDGI 1vk6A 150 :RNGV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2805 Number of alignments=863 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 2 :DAKFLEILV 1vk6A 75 :DVGLFQLAG T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFP 1vk6A 98 :CGYCGHEMYPSKTEWAMLCSHCRERYY T0348 39 :KDGIPMML 1vk6A 150 :RNGVHTVL T0348 50 :ARELAPEEEVK 1vk6A 158 :AGFVEVGETLE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2809 Number of alignments=864 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 98 :CGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2810 Number of alignments=865 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 10 :VCPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 97 :YCGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2811 Number of alignments=866 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAF 1vk6A 98 :CGYCGHEMYPSKTEWAMLCSHCRERY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2812 Number of alignments=867 # 1vk6A read from 1vk6A/merged-a2m # found chain 1vk6A in template set T0348 11 :CPLCKGPLVFDKSKDELICKGDRLAFP 1vk6A 98 :CGYCGHEMYPSKTEWAMLCSHCRERYY Number of specific fragments extracted= 1 number of extra gaps= 0 total=2813 Number of alignments=868 # command:NUMB_ALIGNS: 868 RES2ATOM 0 2 RES2ATOM 1 10 RES2ATOM 2 18 RES2ATOM 3 23 RES2ATOM 4 32 RES2ATOM 5 43 RES2ATOM 6 51 RES2ATOM 7 60 RES2ATOM 8 68 RES2ATOM 9 76 RES2ATOM 10 83 RES2ATOM 11 89 RES2ATOM 12 96 RES2ATOM 13 104 RES2ATOM 14 110 RES2ATOM 16 123 RES2ATOM 17 130 RES2ATOM 18 138 RES2ATOM 19 145 RES2ATOM 20 156 RES2ATOM 21 164 RES2ATOM 22 173 RES2ATOM 23 179 RES2ATOM 24 188 RES2ATOM 25 196 RES2ATOM 26 205 RES2ATOM 27 213 RES2ATOM 28 221 RES2ATOM 29 227 RES2ATOM 31 240 RES2ATOM 32 248 RES2ATOM 33 259 RES2ATOM 34 267 RES2ATOM 35 272 RES2ATOM 36 283 RES2ATOM 37 290 RES2ATOM 38 298 RES2ATOM 39 307 RES2ATOM 41 319 RES2ATOM 42 327 RES2ATOM 43 334 RES2ATOM 44 342 RES2ATOM 45 350 RES2ATOM 46 358 RES2ATOM 47 367 RES2ATOM 48 373 RES2ATOM 49 382 RES2ATOM 50 387 RES2ATOM 51 398 RES2ATOM 52 407 RES2ATOM 53 415 RES2ATOM 54 420 RES2ATOM 55 427 RES2ATOM 56 436 RES2ATOM 57 445 RES2ATOM 58 454 RES2ATOM 59 461 RES2ATOM 60 470 RES2ATOM 61 478 RES2ATOM 62 487 RES2ATOM 63 497 RES2ATOM 64 507 RES2ATOM 65 517 RES2ATOM 66 527 RES2ATOM 67 537 Constraint 84 222 3.7110 4.6388 9.2776 28.7789 Constraint 105 222 5.3775 6.7218 13.4437 28.0069 Constraint 131 222 4.8858 6.1073 12.2146 26.0396 Constraint 131 228 5.0661 6.3327 12.6654 25.8860 Constraint 105 241 4.2729 5.3412 10.6824 23.6288 Constraint 84 241 5.1397 6.4247 12.8494 23.2489 Constraint 197 268 4.4997 5.6246 11.2492 22.5522 Constraint 84 260 5.2713 6.5892 13.1784 20.7243 Constraint 206 273 4.4288 5.5360 11.0721 20.1207 Constraint 139 214 4.6749 5.8436 11.6873 19.7510 Constraint 97 222 5.4013 6.7516 13.5032 19.6011 Constraint 139 228 5.0052 6.2565 12.5130 18.5525 Constraint 97 241 4.4594 5.5743 11.1486 18.4618 Constraint 139 222 5.5647 6.9559 13.9117 18.2795 Constraint 206 284 5.8966 7.3708 14.7415 17.9601 Constraint 206 291 3.8570 4.8212 9.6425 16.9662 Constraint 131 206 4.2998 5.3748 10.7496 16.8226 Constraint 124 228 4.1105 5.1382 10.2763 15.3024 Constraint 131 214 5.1854 6.4817 12.9634 14.5636 Constraint 90 273 5.3510 6.6888 13.3775 14.3408 Constraint 97 260 4.0138 5.0172 10.0344 13.6521 Constraint 189 284 4.9927 6.2409 12.4818 13.3101 Constraint 197 273 5.4935 6.8668 13.7337 11.9855 Constraint 197 284 4.7377 5.9222 11.8443 11.9422 Constraint 69 131 5.1401 6.4252 12.8503 11.6938 Constraint 197 291 5.6326 7.0408 14.0815 11.2013 Constraint 124 222 5.3569 6.6961 13.3923 11.0457 Constraint 84 273 5.2578 6.5723 13.1446 10.7001 Constraint 189 291 4.5243 5.6554 11.3108 10.6525 Constraint 189 299 5.6641 7.0801 14.1602 10.3807 Constraint 69 206 4.9046 6.1307 12.2615 10.3755 Constraint 69 139 4.8557 6.0696 12.1392 10.3231 Constraint 105 260 5.6101 7.0126 14.0252 10.0286 Constraint 61 139 5.3770 6.7213 13.4426 9.9300 Constraint 69 146 4.2452 5.3066 10.6131 9.4592 Constraint 90 260 5.5370 6.9213 13.8425 9.4384 Constraint 61 124 4.6230 5.7787 11.5575 9.2824 Constraint 77 222 6.1973 7.7466 15.4932 8.0787 Constraint 165 291 6.0074 7.5093 15.0185 7.1727 Constraint 61 131 5.6672 7.0840 14.1679 6.6434 Constraint 146 291 5.1718 6.4648 12.9295 6.3618 Constraint 69 157 6.2770 7.8462 15.6924 6.3560 Constraint 180 291 6.0811 7.6014 15.2028 6.3371 Constraint 222 291 5.8302 7.2878 14.5756 6.3231 Constraint 214 291 5.2461 6.5577 13.1153 6.1775 Constraint 131 291 5.0870 6.3588 12.7175 6.1020 Constraint 189 308 4.8787 6.0983 12.1966 6.0502 Constraint 146 228 5.1066 6.3833 12.7666 5.8761 Constraint 206 299 4.3780 5.4724 10.9449 5.8581 Constraint 69 291 4.4668 5.5835 11.1670 5.8121 Constraint 84 291 5.9035 7.3793 14.7587 5.7240 Constraint 197 299 5.3281 6.6601 13.3202 5.6869 Constraint 197 308 3.5908 4.4886 8.9771 5.2558 Constraint 146 222 6.0574 7.5718 15.1435 5.1432 Constraint 180 308 4.3530 5.4413 10.8825 5.0588 Constraint 77 139 5.5634 6.9543 13.9085 5.0293 Constraint 206 308 5.5653 6.9567 13.9134 5.0281 Constraint 131 273 5.6404 7.0505 14.1011 4.8398 Constraint 189 320 3.6495 4.5619 9.1238 4.7354 Constraint 52 139 4.9923 6.2403 12.4806 4.7285 Constraint 52 146 5.0401 6.3002 12.6003 4.6125 Constraint 189 328 4.8174 6.0218 12.0435 4.5251 Constraint 165 268 5.1657 6.4571 12.9143 4.3766 Constraint 206 320 5.9935 7.4918 14.9837 4.3340 Constraint 52 157 4.0650 5.0813 10.1626 4.2988 Constraint 268 335 3.5561 4.4452 8.8903 4.2835 Constraint 197 320 6.0381 7.5476 15.0952 4.2288 Constraint 260 328 5.9436 7.4295 14.8589 4.1813 Constraint 273 351 4.7081 5.8851 11.7702 4.1479 Constraint 260 343 5.5287 6.9109 13.8218 4.1256 Constraint 273 343 4.7672 5.9591 11.9181 4.0007 Constraint 157 308 6.0468 7.5585 15.1169 3.9951 Constraint 268 343 5.7510 7.1887 14.3775 3.9069 Constraint 197 351 5.0974 6.3718 12.7436 3.7622 Constraint 90 335 5.9557 7.4447 14.8894 3.7307 Constraint 189 388 5.6483 7.0603 14.1207 3.7243 Constraint 284 383 5.2720 6.5900 13.1800 3.6824 Constraint 214 284 4.5675 5.7094 11.4187 3.6653 Constraint 97 273 4.1348 5.1685 10.3370 3.6295 Constraint 189 383 5.4896 6.8620 13.7241 3.6264 Constraint 157 268 5.7247 7.1559 14.3119 3.6142 Constraint 268 351 3.4780 4.3475 8.6950 3.5943 Constraint 197 335 4.5849 5.7312 11.4623 3.5901 Constraint 308 421 3.3228 4.1535 8.3070 3.5056 Constraint 189 351 5.7149 7.1436 14.2872 3.4859 Constraint 299 421 4.3097 5.3872 10.7743 3.4377 Constraint 284 351 4.4023 5.5029 11.0058 3.4128 Constraint 131 260 5.7556 7.1945 14.3891 3.3502 Constraint 284 421 5.1902 6.4877 12.9754 3.2969 Constraint 374 446 4.9471 6.1838 12.3677 3.2330 Constraint 335 421 5.9047 7.3809 14.7617 3.1975 Constraint 111 222 5.0994 6.3743 12.7486 3.1314 Constraint 90 222 6.2869 7.8586 15.7172 3.0245 Constraint 90 328 4.3808 5.4760 10.9520 3.0004 Constraint 44 157 4.9678 6.2097 12.4195 2.9965 Constraint 105 273 5.5711 6.9639 13.9278 2.9542 Constraint 84 228 6.1656 7.7070 15.4140 2.8378 Constraint 308 446 6.1296 7.6620 15.3239 2.7946 Constraint 111 241 5.5242 6.9052 13.8104 2.7385 Constraint 359 446 5.4981 6.8726 13.7452 2.7365 Constraint 320 408 5.3295 6.6618 13.3237 2.6808 Constraint 189 368 5.5500 6.9375 13.8750 2.5813 Constraint 165 249 5.4287 6.7859 13.5718 2.5444 Constraint 61 206 5.1716 6.4645 12.9290 2.5282 Constraint 374 508 5.9961 7.4951 14.9903 2.4994 Constraint 374 471 4.3765 5.4706 10.9412 2.4736 Constraint 260 335 6.0097 7.5121 15.0243 2.4432 Constraint 299 408 4.6657 5.8322 11.6643 2.4028 Constraint 139 260 5.6615 7.0769 14.1538 2.3113 Constraint 33 157 4.9734 6.2168 12.4336 2.2828 Constraint 84 328 6.2198 7.7747 15.5494 2.2651 Constraint 90 320 5.8613 7.3267 14.6534 2.1441 Constraint 189 335 6.1767 7.7209 15.4417 2.1409 Constraint 189 374 4.8648 6.0810 12.1621 2.1300 Constraint 197 374 5.8664 7.3330 14.6660 2.0646 Constraint 90 241 6.3070 7.8838 15.7676 2.0568 Constraint 111 228 5.1214 6.4018 12.8036 2.0016 Constraint 359 455 4.9978 6.2472 12.4945 1.9852 Constraint 343 428 5.1945 6.4931 12.9862 1.9433 Constraint 206 328 4.0689 5.0861 10.1723 1.8803 Constraint 44 146 5.9166 7.3958 14.7916 1.8391 Constraint 105 228 6.2263 7.7829 15.5658 1.8253 Constraint 308 455 6.2162 7.7703 15.5406 1.8239 Constraint 284 368 5.2793 6.5991 13.1983 1.8152 Constraint 299 416 4.7368 5.9210 11.8419 1.7759 Constraint 284 408 5.3432 6.6790 13.3579 1.7559 Constraint 291 408 5.2058 6.5073 13.0146 1.6665 Constraint 328 462 5.7168 7.1459 14.2919 1.6231 Constraint 44 139 4.8660 6.0825 12.1651 1.6218 Constraint 189 268 4.0183 5.0229 10.0459 1.5998 Constraint 308 408 3.4487 4.3109 8.6219 1.4937 Constraint 359 428 5.0814 6.3517 12.7034 1.4675 Constraint 308 428 6.1832 7.7290 15.4580 1.4594 Constraint 308 437 6.3699 7.9623 15.9247 1.3484 Constraint 291 437 5.7163 7.1454 14.2908 1.2859 Constraint 131 328 4.5407 5.6758 11.3516 1.2674 Constraint 328 408 4.3963 5.4954 10.9908 1.2471 Constraint 84 268 5.5699 6.9623 13.9247 1.2035 Constraint 124 241 5.9338 7.4173 14.8346 1.1897 Constraint 328 455 4.7532 5.9415 11.8830 1.1858 Constraint 320 416 5.1230 6.4037 12.8075 1.1838 Constraint 139 359 5.1753 6.4691 12.9382 1.1688 Constraint 90 268 5.0512 6.3140 12.6280 1.1668 Constraint 131 241 5.6669 7.0837 14.1673 1.1635 Constraint 206 351 4.3624 5.4530 10.9060 1.1394 Constraint 206 368 4.6470 5.8087 11.6174 1.1026 Constraint 157 228 5.1685 6.4606 12.9212 1.0958 Constraint 359 488 6.0261 7.5326 15.0652 1.0852 Constraint 197 368 3.4205 4.2756 8.5512 1.0806 Constraint 308 383 5.6951 7.1189 14.2377 1.0771 Constraint 206 359 4.2378 5.2973 10.5946 1.0743 Constraint 180 284 6.0631 7.5789 15.1577 1.0707 Constraint 291 368 5.5212 6.9015 13.8030 1.0517 Constraint 241 359 4.5827 5.7283 11.4567 1.0123 Constraint 197 359 4.9020 6.1275 12.2549 1.0108 Constraint 299 437 5.4298 6.7873 13.5746 1.0079 Constraint 268 368 5.6230 7.0287 14.0574 0.9829 Constraint 273 368 4.6556 5.8195 11.6390 0.9809 Constraint 408 479 5.0221 6.2776 12.5552 0.9598 Constraint 291 399 4.9880 6.2350 12.4699 0.9537 Constraint 320 388 5.3126 6.6408 13.2816 0.9523 Constraint 291 383 4.4866 5.6082 11.2164 0.9498 Constraint 291 416 5.8553 7.3191 14.6381 0.9464 Constraint 61 222 4.0871 5.1089 10.2179 0.9342 Constraint 249 343 5.0074 6.2592 12.5184 0.9311 Constraint 260 359 5.1331 6.4164 12.8329 0.9250 Constraint 249 351 5.3299 6.6624 13.3248 0.9229 Constraint 174 268 5.8908 7.3635 14.7269 0.9047 Constraint 374 479 5.9978 7.4973 14.9945 0.8871 Constraint 180 328 4.5891 5.7363 11.4727 0.8869 Constraint 299 383 5.5050 6.8812 13.7625 0.8721 Constraint 214 416 5.2423 6.5529 13.1058 0.8530 Constraint 84 284 5.4853 6.8566 13.7132 0.8431 Constraint 90 299 5.1733 6.4666 12.9333 0.8320 Constraint 222 416 5.1329 6.4161 12.8322 0.8295 Constraint 206 399 4.0125 5.0156 10.0312 0.8192 Constraint 61 146 5.6417 7.0521 14.1042 0.8189 Constraint 260 471 4.8775 6.0969 12.1938 0.8189 Constraint 97 359 4.7517 5.9396 11.8791 0.8149 Constraint 308 388 5.8378 7.2973 14.5945 0.8106 Constraint 174 308 4.3922 5.4902 10.9805 0.7969 Constraint 320 462 5.8681 7.3351 14.6702 0.7963 Constraint 90 291 5.8831 7.3539 14.7079 0.7858 Constraint 139 351 4.3034 5.3793 10.7586 0.7719 Constraint 97 343 5.4991 6.8739 13.7478 0.7706 Constraint 33 131 5.4525 6.8156 13.6312 0.7608 Constraint 291 374 5.4485 6.8107 13.6213 0.7574 Constraint 61 214 5.1519 6.4398 12.8797 0.7566 Constraint 84 299 5.8969 7.3711 14.7421 0.7517 Constraint 146 328 6.0388 7.5485 15.0969 0.7473 Constraint 241 351 5.2330 6.5413 13.0825 0.7421 Constraint 139 273 5.5611 6.9514 13.9028 0.7413 Constraint 308 498 6.0316 7.5394 15.0789 0.7404 Constraint 308 488 5.8933 7.3666 14.7332 0.7404 Constraint 260 462 4.0989 5.1236 10.2472 0.7402 Constraint 320 428 5.6465 7.0581 14.1162 0.7387 Constraint 84 197 5.5336 6.9170 13.8340 0.7369 Constraint 343 471 5.0345 6.2931 12.5863 0.7300 Constraint 90 343 5.9666 7.4582 14.9164 0.7299 Constraint 214 343 5.3904 6.7380 13.4760 0.7285 Constraint 273 383 4.8304 6.0380 12.0760 0.7164 Constraint 69 351 4.3694 5.4617 10.9234 0.7062 Constraint 268 383 5.3831 6.7289 13.4577 0.7010 Constraint 180 268 6.0150 7.5188 15.0375 0.6999 Constraint 273 399 5.9450 7.4313 14.8626 0.6991 Constraint 97 351 5.5197 6.8997 13.7993 0.6840 Constraint 241 388 4.7042 5.8803 11.7606 0.6829 Constraint 299 368 5.4217 6.7771 13.5543 0.6812 Constraint 90 359 5.8891 7.3614 14.7228 0.6772 Constraint 268 359 4.8734 6.0918 12.1836 0.6701 Constraint 241 383 3.7707 4.7134 9.4267 0.6701 Constraint 222 299 6.2600 7.8249 15.6499 0.6675 Constraint 374 455 6.2689 7.8361 15.6723 0.6671 Constraint 308 462 5.8396 7.2995 14.5989 0.6640 Constraint 97 320 4.3194 5.3993 10.7986 0.6592 Constraint 359 437 5.9377 7.4221 14.8442 0.6538 Constraint 84 335 5.5300 6.9125 13.8250 0.6529 Constraint 291 471 4.5887 5.7358 11.4717 0.6505 Constraint 308 374 5.2668 6.5835 13.1671 0.6488 Constraint 206 421 5.2367 6.5459 13.0917 0.6476 Constraint 69 197 4.3595 5.4494 10.8988 0.6456 Constraint 351 428 5.7954 7.2443 14.4886 0.6438 Constraint 84 206 5.6118 7.0147 14.0294 0.6385 Constraint 260 351 5.6673 7.0842 14.1684 0.6361 Constraint 131 268 4.9603 6.2004 12.4008 0.6312 Constraint 165 273 5.2165 6.5206 13.0412 0.6284 Constraint 97 328 5.3159 6.6449 13.2899 0.6278 Constraint 206 383 5.4499 6.8124 13.6248 0.6260 Constraint 97 374 5.1239 6.4048 12.8097 0.6199 Constraint 52 206 5.3184 6.6479 13.2959 0.6190 Constraint 260 455 5.5223 6.9029 13.8058 0.6182 Constraint 291 388 5.3500 6.6875 13.3749 0.6180 Constraint 84 351 4.9030 6.1288 12.2575 0.6173 Constraint 146 249 5.0620 6.3274 12.6549 0.6157 Constraint 11 335 5.0784 6.3480 12.6959 0.6150 Constraint 69 399 4.3879 5.4849 10.9698 0.6123 Constraint 44 408 4.9111 6.1389 12.2779 0.6113 Constraint 90 399 6.1360 7.6700 15.3399 0.6094 Constraint 131 299 4.7498 5.9372 11.8744 0.6094 Constraint 222 343 4.9178 6.1473 12.2946 0.6075 Constraint 124 197 5.0421 6.3027 12.6053 0.6073 Constraint 139 328 4.6256 5.7820 11.5641 0.6060 Constraint 33 206 5.7119 7.1399 14.2798 0.6037 Constraint 33 408 4.1550 5.1938 10.3876 0.5956 Constraint 399 479 5.5405 6.9256 13.8512 0.5943 Constraint 343 416 4.6112 5.7640 11.5280 0.5932 Constraint 416 488 5.2836 6.6045 13.2091 0.5882 Constraint 139 268 5.0560 6.3200 12.6401 0.5863 Constraint 44 308 4.9850 6.2312 12.4624 0.5849 Constraint 97 206 5.0494 6.3118 12.6236 0.5843 Constraint 228 416 5.1839 6.4799 12.9597 0.5796 Constraint 84 343 4.8910 6.1137 12.2274 0.5795 Constraint 69 437 4.4832 5.6040 11.2079 0.5790 Constraint 241 408 4.2353 5.2942 10.5883 0.5756 Constraint 214 351 5.1080 6.3849 12.7699 0.5755 Constraint 69 165 6.0681 7.5851 15.1701 0.5746 Constraint 61 299 6.0773 7.5967 15.1933 0.5731 Constraint 24 343 5.3912 6.7390 13.4780 0.5729 Constraint 69 214 5.1475 6.4343 12.8686 0.5726 Constraint 111 206 5.7791 7.2239 14.4477 0.5675 Constraint 249 320 5.3873 6.7341 13.4683 0.5672 Constraint 97 228 6.0340 7.5425 15.0851 0.5666 Constraint 249 383 4.2489 5.3112 10.6223 0.5646 Constraint 299 374 4.4695 5.5869 11.1738 0.5632 Constraint 343 462 4.6905 5.8632 11.7263 0.5598 Constraint 335 462 5.8274 7.2843 14.5685 0.5588 Constraint 222 368 5.3352 6.6690 13.3379 0.5581 Constraint 351 421 5.9667 7.4584 14.9168 0.5568 Constraint 105 197 5.4335 6.7919 13.5839 0.5554 Constraint 52 222 5.0729 6.3411 12.6821 0.5547 Constraint 249 359 5.2815 6.6019 13.2037 0.5536 Constraint 124 206 5.5155 6.8943 13.7887 0.5535 Constraint 260 479 4.7406 5.9258 11.8516 0.5530 Constraint 61 241 4.6605 5.8257 11.6513 0.5529 Constraint 90 383 4.5545 5.6931 11.3862 0.5517 Constraint 44 222 5.4907 6.8634 13.7267 0.5515 Constraint 197 343 5.9117 7.3897 14.7793 0.5498 Constraint 33 416 5.7445 7.1806 14.3611 0.5466 Constraint 180 374 4.2610 5.3262 10.6524 0.5412 Constraint 90 368 4.6249 5.7811 11.5622 0.5410 Constraint 260 383 5.0800 6.3500 12.7000 0.5359 Constraint 416 498 5.4192 6.7739 13.5479 0.5355 Constraint 222 351 5.5623 6.9529 13.9058 0.5323 Constraint 105 206 5.3764 6.7205 13.4409 0.5316 Constraint 197 421 4.8860 6.1075 12.2149 0.5312 Constraint 77 268 5.4995 6.8744 13.7487 0.5302 Constraint 131 351 5.1795 6.4744 12.9488 0.5301 Constraint 124 268 5.2732 6.5915 13.1830 0.5290 Constraint 3 335 5.0723 6.3404 12.6808 0.5277 Constraint 139 343 4.8889 6.1112 12.2223 0.5224 Constraint 241 471 4.6178 5.7723 11.5445 0.5221 Constraint 328 446 4.7374 5.9217 11.8434 0.5166 Constraint 97 335 4.1427 5.1784 10.3567 0.5166 Constraint 77 383 5.0592 6.3240 12.6480 0.5161 Constraint 399 471 4.8667 6.0833 12.1666 0.5142 Constraint 84 368 5.8139 7.2673 14.5346 0.5139 Constraint 77 214 4.6252 5.7815 11.5629 0.5113 Constraint 180 399 5.5271 6.9088 13.8177 0.5108 Constraint 222 408 4.6813 5.8516 11.7032 0.5106 Constraint 33 351 5.6165 7.0206 14.0411 0.5106 Constraint 241 368 4.9734 6.2168 12.4335 0.5090 Constraint 90 284 5.2080 6.5100 13.0200 0.5086 Constraint 157 335 6.1483 7.6854 15.3708 0.5085 Constraint 61 416 4.5562 5.6952 11.3904 0.5071 Constraint 33 343 5.5487 6.9359 13.8717 0.5063 Constraint 214 408 5.2130 6.5163 13.0326 0.5059 Constraint 131 284 5.6622 7.0778 14.1556 0.5031 Constraint 97 383 5.6892 7.1115 14.2231 0.5017 Constraint 383 471 5.2676 6.5844 13.1689 0.4998 Constraint 77 241 3.0195 3.7744 7.5488 0.4982 Constraint 206 416 4.9762 6.2202 12.4404 0.4974 Constraint 408 488 4.9404 6.1755 12.3510 0.4966 Constraint 84 416 4.8589 6.0736 12.1471 0.4928 Constraint 90 206 5.4286 6.7857 13.5714 0.4921 Constraint 33 428 5.4988 6.8734 13.7469 0.4895 Constraint 90 351 4.4090 5.5112 11.0224 0.4879 Constraint 241 343 4.9502 6.1878 12.3756 0.4863 Constraint 44 388 5.1492 6.4365 12.8729 0.4836 Constraint 165 284 4.7565 5.9457 11.8913 0.4835 Constraint 273 359 5.7725 7.2157 14.4313 0.4825 Constraint 77 388 4.6763 5.8454 11.6907 0.4811 Constraint 69 328 3.8065 4.7581 9.5162 0.4788 Constraint 222 335 4.7214 5.9017 11.8034 0.4787 Constraint 105 284 5.1193 6.3992 12.7983 0.4786 Constraint 249 328 5.5454 6.9317 13.8635 0.4782 Constraint 308 471 5.2011 6.5014 13.0027 0.4737 Constraint 61 197 5.9330 7.4162 14.8324 0.4713 Constraint 52 388 5.3952 6.7439 13.4879 0.4700 Constraint 97 408 4.2794 5.3492 10.6984 0.4644 Constraint 222 320 5.0826 6.3533 12.7066 0.4631 Constraint 399 488 5.1364 6.4205 12.8410 0.4618 Constraint 174 388 5.9795 7.4744 14.9488 0.4616 Constraint 189 399 4.9942 6.2427 12.4854 0.4613 Constraint 105 214 5.7367 7.1709 14.3418 0.4608 Constraint 61 437 4.9638 6.2047 12.4094 0.4602 Constraint 3 77 3.8668 4.8336 9.6671 0.4597 Constraint 273 388 5.4236 6.7796 13.5591 0.4584 Constraint 33 421 4.4478 5.5598 11.1196 0.4577 Constraint 228 408 5.0761 6.3452 12.6903 0.4566 Constraint 388 479 4.9678 6.2098 12.4196 0.4533 Constraint 84 388 5.4821 6.8526 13.7053 0.4505 Constraint 105 343 5.9585 7.4481 14.8963 0.4502 Constraint 157 383 6.2015 7.7519 15.5038 0.4480 Constraint 139 399 4.4953 5.6191 11.2382 0.4480 Constraint 268 374 4.7026 5.8782 11.7565 0.4479 Constraint 180 416 5.0059 6.2574 12.5148 0.4461 Constraint 77 291 4.7950 5.9938 11.9876 0.4455 Constraint 299 462 4.0127 5.0159 10.0319 0.4455 Constraint 97 214 4.6648 5.8310 11.6620 0.4451 Constraint 299 498 6.0370 7.5463 15.0925 0.4436 Constraint 299 488 3.2233 4.0291 8.0582 0.4436 Constraint 299 455 5.1357 6.4196 12.8391 0.4436 Constraint 214 299 5.8268 7.2835 14.5670 0.4387 Constraint 241 320 5.5948 6.9935 13.9870 0.4385 Constraint 260 498 5.1382 6.4228 12.8455 0.4378 Constraint 157 368 5.9914 7.4893 14.9786 0.4356 Constraint 84 428 6.0178 7.5223 15.0446 0.4347 Constraint 84 399 4.7060 5.8825 11.7649 0.4332 Constraint 77 197 6.1918 7.7397 15.4794 0.4319 Constraint 197 328 5.8006 7.2507 14.5015 0.4305 Constraint 105 189 5.2007 6.5009 13.0017 0.4289 Constraint 97 488 4.9228 6.1534 12.3069 0.4287 Constraint 284 399 4.9478 6.1847 12.3695 0.4284 Constraint 260 416 5.6167 7.0208 14.0417 0.4281 Constraint 206 446 5.3662 6.7077 13.4154 0.4273 Constraint 19 335 4.5035 5.6293 11.2587 0.4268 Constraint 90 498 5.5381 6.9226 13.8453 0.4265 Constraint 124 214 3.8981 4.8727 9.7453 0.4260 Constraint 77 335 4.5857 5.7321 11.4642 0.4259 Constraint 84 383 4.6333 5.7916 11.5832 0.4255 Constraint 97 437 4.0919 5.1149 10.2297 0.4254 Constraint 446 528 4.5128 5.6410 11.2819 0.4254 Constraint 69 299 5.3719 6.7149 13.4298 0.4245 Constraint 249 471 4.2171 5.2713 10.5427 0.4244 Constraint 105 428 4.5090 5.6363 11.2725 0.4242 Constraint 343 421 6.0063 7.5079 15.0158 0.4220 Constraint 241 416 5.8308 7.2884 14.5769 0.4217 Constraint 249 374 5.1107 6.3884 12.7768 0.4206 Constraint 84 320 4.6779 5.8473 11.6946 0.4202 Constraint 77 249 5.8737 7.3421 14.6842 0.4170 Constraint 206 335 6.1495 7.6869 15.3737 0.4167 Constraint 222 479 5.0760 6.3450 12.6900 0.4165 Constraint 146 260 4.6495 5.8119 11.6238 0.4157 Constraint 77 146 5.7338 7.1672 14.3344 0.4152 Constraint 69 241 5.8419 7.3023 14.6046 0.4144 Constraint 241 479 4.3291 5.4114 10.8228 0.4136 Constraint 241 328 4.5972 5.7466 11.4931 0.4110 Constraint 273 408 5.3516 6.6895 13.3791 0.4107 Constraint 222 508 5.2798 6.5997 13.1994 0.4107 Constraint 97 368 4.4486 5.5607 11.1214 0.4102 Constraint 222 328 5.1036 6.3795 12.7590 0.4094 Constraint 44 383 5.6900 7.1126 14.2251 0.4087 Constraint 97 455 3.9086 4.8857 9.7715 0.4081 Constraint 44 320 5.9311 7.4139 14.8278 0.4065 Constraint 214 421 5.2213 6.5266 13.0533 0.4065 Constraint 328 399 6.1412 7.6765 15.3530 0.4055 Constraint 84 359 4.2498 5.3122 10.6245 0.4045 Constraint 383 455 5.7462 7.1827 14.3654 0.4019 Constraint 105 399 5.9120 7.3900 14.7800 0.4006 Constraint 52 408 4.8954 6.1193 12.2386 0.4004 Constraint 33 197 5.6112 7.0140 14.0281 0.3999 Constraint 197 399 5.2423 6.5529 13.1057 0.3993 Constraint 97 284 5.3827 6.7283 13.4566 0.3988 Constraint 291 359 5.5162 6.8953 13.7906 0.3977 Constraint 90 408 5.3132 6.6415 13.2831 0.3974 Constraint 197 383 5.6587 7.0734 14.1469 0.3941 Constraint 69 180 5.7675 7.2094 14.4188 0.3937 Constraint 105 320 4.1614 5.2017 10.4034 0.3919 Constraint 165 328 4.7106 5.8882 11.7764 0.3905 Constraint 131 343 5.1482 6.4352 12.8704 0.3903 Constraint 268 388 4.5488 5.6860 11.3720 0.3877 Constraint 359 479 5.9979 7.4974 14.9949 0.3874 Constraint 299 428 5.4577 6.8221 13.6442 0.3870 Constraint 77 399 5.6417 7.0521 14.1042 0.3866 Constraint 97 299 5.9336 7.4171 14.8341 0.3849 Constraint 84 437 5.2860 6.6075 13.2150 0.3814 Constraint 291 446 3.9906 4.9883 9.9765 0.3808 Constraint 146 268 5.4588 6.8236 13.6471 0.3797 Constraint 97 416 5.4569 6.8211 13.6423 0.3792 Constraint 124 335 4.5781 5.7226 11.4453 0.3789 Constraint 44 421 5.8132 7.2665 14.5331 0.3785 Constraint 174 383 4.8531 6.0664 12.1328 0.3779 Constraint 206 408 5.0909 6.3637 12.7273 0.3776 Constraint 90 428 4.8354 6.0443 12.0885 0.3773 Constraint 84 146 4.8967 6.1209 12.2417 0.3768 Constraint 260 488 4.9836 6.2295 12.4590 0.3753 Constraint 131 368 5.8959 7.3699 14.7398 0.3751 Constraint 139 284 5.8574 7.3217 14.6434 0.3748 Constraint 388 488 4.3808 5.4760 10.9521 0.3747 Constraint 284 374 5.1458 6.4322 12.8644 0.3746 Constraint 206 343 5.3683 6.7104 13.4207 0.3737 Constraint 44 206 4.1762 5.2203 10.4406 0.3709 Constraint 320 471 5.2136 6.5170 13.0340 0.3702 Constraint 284 455 5.7816 7.2270 14.4541 0.3700 Constraint 249 408 4.7715 5.9643 11.9287 0.3688 Constraint 105 359 5.7491 7.1864 14.3728 0.3685 Constraint 33 388 5.4915 6.8644 13.7288 0.3682 Constraint 273 421 4.8981 6.1226 12.2453 0.3679 Constraint 320 399 6.0106 7.5133 15.0266 0.3679 Constraint 111 197 4.7112 5.8890 11.7780 0.3666 Constraint 124 471 4.7742 5.9678 11.9356 0.3655 Constraint 446 538 5.4203 6.7754 13.5508 0.3643 Constraint 249 388 5.8190 7.2737 14.5474 0.3640 Constraint 111 214 3.5449 4.4312 8.8623 0.3636 Constraint 33 320 5.4102 6.7628 13.5255 0.3626 Constraint 90 455 5.6182 7.0227 14.0454 0.3623 Constraint 61 408 5.3433 6.6791 13.3582 0.3612 Constraint 77 421 5.6738 7.0923 14.1845 0.3604 Constraint 214 328 5.3887 6.7359 13.4718 0.3591 Constraint 241 374 4.7107 5.8884 11.7767 0.3590 Constraint 69 388 5.9953 7.4942 14.9883 0.3580 Constraint 335 471 5.2040 6.5050 13.0100 0.3577 Constraint 77 528 5.0126 6.2657 12.5315 0.3565 Constraint 157 399 5.0398 6.2997 12.5994 0.3564 Constraint 284 388 4.8976 6.1220 12.2441 0.3564 Constraint 146 308 5.6793 7.0991 14.1982 0.3539 Constraint 214 359 5.7538 7.1923 14.3846 0.3538 Constraint 388 508 5.4579 6.8224 13.6448 0.3524 Constraint 222 498 4.5703 5.7129 11.4257 0.3507 Constraint 273 455 5.2310 6.5387 13.0775 0.3499 Constraint 249 335 5.8613 7.3266 14.6531 0.3490 Constraint 44 428 4.2551 5.3189 10.6378 0.3458 Constraint 33 189 4.8155 6.0194 12.0387 0.3457 Constraint 388 498 5.5912 6.9891 13.9781 0.3452 Constraint 33 335 3.6635 4.5794 9.1587 0.3433 Constraint 428 508 5.4043 6.7554 13.5107 0.3418 Constraint 19 320 5.5048 6.8810 13.7620 0.3416 Constraint 268 488 3.8160 4.7701 9.5401 0.3413 Constraint 24 320 5.0688 6.3359 12.6719 0.3406 Constraint 61 335 4.2315 5.2894 10.5788 0.3401 Constraint 249 479 5.0658 6.3323 12.6645 0.3399 Constraint 308 399 5.1030 6.3788 12.7575 0.3394 Constraint 291 428 5.1390 6.4237 12.8474 0.3389 Constraint 111 189 5.6563 7.0704 14.1408 0.3379 Constraint 273 538 5.2434 6.5543 13.1086 0.3374 Constraint 105 437 3.9363 4.9204 9.8408 0.3373 Constraint 90 374 5.9909 7.4886 14.9773 0.3361 Constraint 61 399 3.6488 4.5610 9.1219 0.3360 Constraint 52 399 6.1958 7.7448 15.4896 0.3360 Constraint 44 416 4.1058 5.1322 10.2644 0.3360 Constraint 222 421 5.1197 6.3997 12.7993 0.3359 Constraint 33 383 4.5269 5.6587 11.3173 0.3335 Constraint 105 249 4.6632 5.8290 11.6581 0.3328 Constraint 3 260 5.4213 6.7766 13.5533 0.3324 Constraint 84 408 4.3766 5.4707 10.9415 0.3314 Constraint 222 359 4.6383 5.7978 11.5957 0.3310 Constraint 416 528 4.1136 5.1420 10.2841 0.3301 Constraint 146 241 5.3573 6.6967 13.3933 0.3301 Constraint 388 518 5.3375 6.6718 13.3437 0.3293 Constraint 206 388 5.5259 6.9073 13.8147 0.3278 Constraint 52 124 5.4175 6.7718 13.5437 0.3270 Constraint 421 498 5.7144 7.1430 14.2859 0.3255 Constraint 61 308 5.3959 6.7449 13.4899 0.3252 Constraint 320 488 4.8368 6.0460 12.0920 0.3251 Constraint 222 471 5.6694 7.0867 14.1734 0.3243 Constraint 408 518 5.5435 6.9293 13.8587 0.3209 Constraint 90 214 5.6862 7.1078 14.2156 0.3197 Constraint 222 399 5.0115 6.2644 12.5287 0.3194 Constraint 24 189 5.3340 6.6675 13.3349 0.3182 Constraint 97 291 3.5764 4.4704 8.9409 0.3179 Constraint 105 291 5.0074 6.2592 12.5184 0.3176 Constraint 428 528 5.5213 6.9016 13.8031 0.3170 Constraint 351 471 5.2508 6.5635 13.1270 0.3148 Constraint 249 462 6.3566 7.9458 15.8916 0.3148 Constraint 180 388 4.7988 5.9985 11.9969 0.3142 Constraint 24 335 5.6144 7.0180 14.0359 0.3133 Constraint 291 479 5.7884 7.2356 14.4711 0.3131 Constraint 77 437 6.0914 7.6143 15.2286 0.3128 Constraint 273 437 4.8465 6.0581 12.1162 0.3127 Constraint 241 399 4.2674 5.3343 10.6686 0.3113 Constraint 77 328 5.0873 6.3592 12.7183 0.3107 Constraint 69 174 4.9530 6.1913 12.3825 0.3105 Constraint 214 471 5.5326 6.9157 13.8314 0.3104 Constraint 124 328 5.8465 7.3081 14.6161 0.3103 Constraint 84 214 5.2076 6.5095 13.0190 0.3096 Constraint 273 428 5.4426 6.8033 13.6066 0.3089 Constraint 180 421 5.0376 6.2971 12.5941 0.3085 Constraint 77 308 6.0138 7.5172 15.0345 0.3077 Constraint 421 528 5.4025 6.7532 13.5063 0.3077 Constraint 383 479 4.7790 5.9738 11.9475 0.3063 Constraint 222 488 4.9165 6.1456 12.2913 0.3058 Constraint 19 214 4.6040 5.7550 11.5100 0.3058 Constraint 328 471 5.9841 7.4801 14.9602 0.3051 Constraint 77 273 5.7060 7.1325 14.2650 0.3037 Constraint 241 528 5.1579 6.4473 12.8947 0.3033 Constraint 260 368 3.5630 4.4537 8.9074 0.3006 Constraint 368 437 5.5618 6.9522 13.9044 0.3004 Constraint 105 374 5.0065 6.2582 12.5163 0.3002 Constraint 69 508 4.9786 6.2233 12.4465 0.3002 Constraint 61 479 5.1156 6.3945 12.7891 0.2997 Constraint 105 368 4.8678 6.0847 12.1695 0.2997 Constraint 241 462 5.2833 6.6041 13.2083 0.2993 Constraint 214 335 5.4341 6.7926 13.5852 0.2963 Constraint 44 214 5.0789 6.3486 12.6973 0.2957 Constraint 77 498 5.0536 6.3170 12.6339 0.2953 Constraint 241 498 4.7701 5.9626 11.9253 0.2951 Constraint 351 498 4.4752 5.5940 11.1880 0.2935 Constraint 273 479 5.9200 7.4001 14.8001 0.2908 Constraint 11 222 4.6850 5.8563 11.7126 0.2905 Constraint 273 374 5.2139 6.5174 13.0348 0.2902 Constraint 77 408 5.4419 6.8024 13.6048 0.2894 Constraint 90 421 5.9897 7.4871 14.9742 0.2892 Constraint 408 498 5.2332 6.5415 13.0829 0.2875 Constraint 174 328 5.9737 7.4672 14.9343 0.2869 Constraint 90 416 5.0191 6.2739 12.5478 0.2866 Constraint 222 538 5.2037 6.5046 13.0092 0.2863 Constraint 374 498 4.8612 6.0765 12.1530 0.2862 Constraint 105 416 5.2509 6.5637 13.1273 0.2856 Constraint 77 299 5.0781 6.3477 12.6953 0.2843 Constraint 69 308 4.1890 5.2363 10.4726 0.2843 Constraint 388 471 5.0869 6.3586 12.7172 0.2838 Constraint 189 455 4.8440 6.0550 12.1100 0.2838 Constraint 61 471 4.1045 5.1306 10.2612 0.2825 Constraint 228 399 4.9786 6.2232 12.4464 0.2823 Constraint 273 416 5.1209 6.4012 12.8024 0.2820 Constraint 197 428 4.9882 6.2352 12.4704 0.2819 Constraint 61 268 5.1124 6.3905 12.7810 0.2814 Constraint 228 498 5.4749 6.8437 13.6873 0.2814 Constraint 105 455 5.5972 6.9965 13.9929 0.2814 Constraint 44 328 5.6025 7.0032 14.0064 0.2811 Constraint 214 388 4.5795 5.7244 11.4488 0.2809 Constraint 33 139 4.0146 5.0182 10.0365 0.2796 Constraint 11 498 6.1179 7.6474 15.2948 0.2794 Constraint 131 416 5.0492 6.3115 12.6231 0.2791 Constraint 131 421 5.0762 6.3453 12.6906 0.2790 Constraint 228 368 5.7268 7.1585 14.3171 0.2780 Constraint 174 291 5.1589 6.4487 12.8973 0.2779 Constraint 197 446 5.9906 7.4883 14.9766 0.2778 Constraint 11 228 3.8688 4.8360 9.6719 0.2774 Constraint 320 455 4.3758 5.4697 10.9395 0.2769 Constraint 222 462 3.9926 4.9908 9.9815 0.2755 Constraint 69 446 5.0697 6.3371 12.6742 0.2745 Constraint 33 299 4.1448 5.1811 10.3621 0.2729 Constraint 368 471 4.9535 6.1919 12.3838 0.2714 Constraint 24 299 4.7749 5.9686 11.9373 0.2704 Constraint 146 343 5.6927 7.1159 14.2318 0.2698 Constraint 90 508 4.9559 6.1948 12.3896 0.2695 Constraint 77 508 4.9443 6.1804 12.3607 0.2695 Constraint 165 299 5.7613 7.2016 14.4032 0.2694 Constraint 328 416 4.6953 5.8691 11.7381 0.2692 Constraint 3 222 4.0766 5.0958 10.1916 0.2688 Constraint 19 206 4.6406 5.8007 11.6015 0.2681 Constraint 90 437 5.6137 7.0171 14.0342 0.2677 Constraint 146 335 5.0536 6.3170 12.6341 0.2675 Constraint 44 437 4.3126 5.3907 10.7815 0.2675 Constraint 124 446 5.2735 6.5918 13.1837 0.2671 Constraint 77 343 5.5617 6.9521 13.9042 0.2654 Constraint 206 471 5.4062 6.7577 13.5155 0.2652 Constraint 180 455 5.1873 6.4841 12.9682 0.2649 Constraint 24 421 5.4713 6.8392 13.6783 0.2645 Constraint 11 291 5.2549 6.5686 13.1372 0.2642 Constraint 77 446 3.5119 4.3899 8.7799 0.2630 Constraint 44 368 6.2730 7.8413 15.6825 0.2628 Constraint 139 241 4.2877 5.3596 10.7192 0.2617 Constraint 19 105 4.9755 6.2194 12.4388 0.2606 Constraint 33 291 4.3822 5.4777 10.9554 0.2602 Constraint 61 273 5.6166 7.0207 14.0414 0.2597 Constraint 33 471 5.8006 7.2508 14.5016 0.2597 Constraint 19 328 4.4091 5.5114 11.0227 0.2591 Constraint 3 241 5.8921 7.3651 14.7302 0.2589 Constraint 3 124 5.3466 6.6832 13.3664 0.2587 Constraint 105 268 4.8485 6.0606 12.1212 0.2585 Constraint 52 174 4.8215 6.0269 12.0538 0.2573 Constraint 189 408 4.9823 6.2279 12.4558 0.2571 Constraint 320 446 5.8237 7.2796 14.5592 0.2559 Constraint 97 428 4.5090 5.6362 11.2724 0.2558 Constraint 320 437 5.0115 6.2644 12.5288 0.2558 Constraint 368 528 5.4693 6.8367 13.6733 0.2557 Constraint 222 388 5.4440 6.8051 13.6101 0.2552 Constraint 222 374 5.2717 6.5897 13.1793 0.2543 Constraint 206 437 3.4530 4.3163 8.6325 0.2543 Constraint 61 446 4.4935 5.6169 11.2337 0.2540 Constraint 260 408 5.4858 6.8572 13.7144 0.2539 Constraint 249 498 5.7315 7.1644 14.3287 0.2534 Constraint 84 498 4.8389 6.0487 12.0973 0.2534 Constraint 249 488 4.7907 5.9884 11.9769 0.2531 Constraint 97 498 5.0085 6.2606 12.5211 0.2524 Constraint 383 488 4.7167 5.8958 11.7917 0.2522 Constraint 291 455 5.2722 6.5902 13.1804 0.2520 Constraint 11 206 5.4363 6.7954 13.5908 0.2515 Constraint 174 241 5.1131 6.3913 12.7827 0.2508 Constraint 222 518 4.8228 6.0285 12.0571 0.2498 Constraint 421 508 5.0449 6.3061 12.6122 0.2497 Constraint 69 498 3.6893 4.6116 9.2232 0.2488 Constraint 206 479 4.9257 6.1572 12.3143 0.2483 Constraint 146 273 5.9020 7.3776 14.7551 0.2482 Constraint 3 351 5.6262 7.0328 14.0655 0.2478 Constraint 69 528 4.9465 6.1831 12.3663 0.2470 Constraint 77 428 4.6336 5.7920 11.5839 0.2466 Constraint 3 299 5.6543 7.0678 14.1357 0.2459 Constraint 299 399 5.2413 6.5517 13.1033 0.2458 Constraint 284 471 5.9223 7.4029 14.8058 0.2455 Constraint 328 421 5.4644 6.8305 13.6610 0.2453 Constraint 90 488 4.0516 5.0645 10.1289 0.2447 Constraint 368 518 5.4476 6.8095 13.6189 0.2441 Constraint 139 291 5.5317 6.9146 13.8293 0.2441 Constraint 97 308 5.0397 6.2997 12.5994 0.2427 Constraint 146 284 6.2071 7.7589 15.5178 0.2427 Constraint 69 408 4.1105 5.1382 10.2763 0.2426 Constraint 268 437 4.9785 6.2232 12.4464 0.2424 Constraint 69 335 4.7539 5.9424 11.8848 0.2419 Constraint 437 518 5.2785 6.5981 13.1961 0.2413 Constraint 105 408 4.9441 6.1802 12.3603 0.2407 Constraint 228 508 4.8878 6.1098 12.2195 0.2401 Constraint 241 508 4.1809 5.2261 10.4521 0.2398 Constraint 214 479 5.5923 6.9904 13.9809 0.2395 Constraint 189 260 5.5237 6.9047 13.8093 0.2388 Constraint 111 320 5.3544 6.6930 13.3859 0.2387 Constraint 3 291 4.5386 5.6733 11.3466 0.2383 Constraint 146 351 4.4935 5.6169 11.2338 0.2374 Constraint 139 368 4.7620 5.9524 11.9049 0.2374 Constraint 84 455 4.3869 5.4837 10.9673 0.2373 Constraint 61 538 4.9554 6.1943 12.3885 0.2372 Constraint 180 446 5.1590 6.4488 12.8975 0.2371 Constraint 222 383 4.3736 5.4670 10.9339 0.2371 Constraint 206 455 4.7216 5.9020 11.8039 0.2369 Constraint 268 479 5.6220 7.0274 14.0549 0.2364 Constraint 24 260 3.8688 4.8360 9.6720 0.2357 Constraint 174 368 5.6051 7.0063 14.0127 0.2347 Constraint 165 368 5.4646 6.8308 13.6616 0.2345 Constraint 61 157 4.3800 5.4750 10.9500 0.2340 Constraint 189 416 4.4005 5.5006 11.0011 0.2332 Constraint 268 462 5.2648 6.5810 13.1620 0.2328 Constraint 214 455 5.1192 6.3989 12.7979 0.2326 Constraint 214 383 5.4417 6.8022 13.6044 0.2318 Constraint 69 428 5.0605 6.3256 12.6512 0.2306 Constraint 268 498 5.6386 7.0483 14.0966 0.2301 Constraint 383 518 5.9840 7.4800 14.9599 0.2294 Constraint 359 462 5.1558 6.4448 12.8896 0.2293 Constraint 19 197 5.4031 6.7539 13.5078 0.2293 Constraint 24 273 4.9798 6.2248 12.4496 0.2288 Constraint 77 351 4.9912 6.2389 12.4779 0.2285 Constraint 61 421 4.5654 5.7067 11.4134 0.2283 Constraint 124 299 5.4263 6.7829 13.5657 0.2273 Constraint 180 320 5.4582 6.8227 13.6455 0.2251 Constraint 33 241 5.1417 6.4271 12.8542 0.2243 Constraint 24 105 4.6083 5.7603 11.5207 0.2242 Constraint 105 335 5.2493 6.5616 13.1233 0.2233 Constraint 61 428 5.2513 6.5641 13.1283 0.2232 Constraint 69 518 4.4363 5.5454 11.0907 0.2231 Constraint 77 284 5.2460 6.5575 13.1151 0.2219 Constraint 84 488 5.2192 6.5240 13.0480 0.2213 Constraint 24 206 5.3967 6.7459 13.4918 0.2212 Constraint 335 408 4.7959 5.9949 11.9899 0.2210 Constraint 11 479 5.2306 6.5383 13.0766 0.2195 Constraint 77 518 5.2945 6.6181 13.2363 0.2194 Constraint 214 498 5.3681 6.7101 13.4202 0.2194 Constraint 84 374 4.3563 5.4453 10.8907 0.2189 Constraint 44 174 5.7099 7.1373 14.2746 0.2185 Constraint 174 284 4.4641 5.5801 11.1602 0.2174 Constraint 97 399 5.3817 6.7272 13.4544 0.2158 Constraint 124 351 5.6420 7.0525 14.1050 0.2158 Constraint 3 273 4.1133 5.1416 10.2833 0.2146 Constraint 3 383 4.7273 5.9092 11.8183 0.2125 Constraint 44 284 5.8443 7.3054 14.6108 0.2125 Constraint 228 383 5.2847 6.6059 13.2118 0.2115 Constraint 214 446 5.2035 6.5043 13.0087 0.2114 Constraint 228 374 4.3980 5.4975 10.9949 0.2107 Constraint 214 374 5.4648 6.8310 13.6619 0.2107 Constraint 33 498 5.8811 7.3514 14.7029 0.2106 Constraint 139 299 5.0264 6.2830 12.5660 0.2106 Constraint 165 308 5.6239 7.0299 14.0598 0.2105 Constraint 52 416 5.1237 6.4047 12.8094 0.2102 Constraint 180 462 5.1991 6.4988 12.9976 0.2098 Constraint 11 273 4.7328 5.9160 11.8320 0.2085 Constraint 157 359 4.2054 5.2567 10.5135 0.2079 Constraint 214 528 4.0002 5.0003 10.0006 0.2077 Constraint 24 241 4.5906 5.7382 11.4765 0.2069 Constraint 44 399 5.5163 6.8953 13.7906 0.2068 Constraint 180 260 6.0379 7.5474 15.0948 0.2060 Constraint 124 249 5.2490 6.5613 13.1226 0.2060 Constraint 69 268 4.3038 5.3798 10.7595 0.2055 Constraint 408 528 5.5542 6.9428 13.8856 0.2053 Constraint 84 249 5.6396 7.0494 14.0989 0.2043 Constraint 165 351 4.4092 5.5115 11.0229 0.2042 Constraint 291 488 5.6486 7.0607 14.1215 0.2039 Constraint 97 388 4.4709 5.5887 11.1773 0.2039 Constraint 33 508 5.0916 6.3645 12.7289 0.2035 Constraint 111 328 5.9286 7.4107 14.8215 0.2034 Constraint 165 320 5.2818 6.6023 13.2046 0.2031 Constraint 77 471 4.7482 5.9353 11.8705 0.2031 Constraint 69 421 3.6874 4.6092 9.2185 0.2031 Constraint 61 343 5.0309 6.2886 12.5773 0.2031 Constraint 33 308 5.6244 7.0305 14.0609 0.2027 Constraint 165 335 4.9549 6.1937 12.3874 0.2027 Constraint 206 498 4.8065 6.0081 12.0161 0.2016 Constraint 388 462 5.2107 6.5134 13.0269 0.2002 Constraint 24 408 4.6479 5.8099 11.6197 0.2002 Constraint 19 260 4.9154 6.1443 12.2885 0.1998 Constraint 228 359 4.6312 5.7890 11.5781 0.1998 Constraint 97 421 4.9380 6.1724 12.3449 0.1997 Constraint 52 437 5.5495 6.9369 13.8738 0.1993 Constraint 131 249 4.5999 5.7499 11.4997 0.1991 Constraint 61 528 4.6765 5.8457 11.6914 0.1989 Constraint 343 437 5.6621 7.0777 14.1553 0.1986 Constraint 241 488 4.2882 5.3603 10.7205 0.1985 Constraint 124 343 5.2867 6.6084 13.2168 0.1975 Constraint 69 416 4.3097 5.3872 10.7744 0.1971 Constraint 77 359 5.5519 6.9398 13.8797 0.1970 Constraint 197 408 4.7686 5.9608 11.9216 0.1965 Constraint 228 528 5.4016 6.7520 13.5040 0.1964 Constraint 111 284 5.4426 6.8032 13.6065 0.1964 Constraint 260 508 5.5779 6.9724 13.9448 0.1951 Constraint 11 383 5.3234 6.6543 13.3085 0.1950 Constraint 131 320 5.5080 6.8850 13.7700 0.1945 Constraint 157 299 6.2523 7.8154 15.6307 0.1943 Constraint 44 197 5.3191 6.6489 13.2978 0.1942 Constraint 131 308 3.8782 4.8478 9.6955 0.1936 Constraint 11 124 4.9834 6.2293 12.4586 0.1934 Constraint 52 214 4.3645 5.4556 10.9112 0.1928 Constraint 241 518 6.0421 7.5526 15.1053 0.1919 Constraint 33 455 5.0575 6.3219 12.6438 0.1908 Constraint 84 421 4.1455 5.1819 10.3638 0.1900 Constraint 273 498 5.2201 6.5251 13.0502 0.1900 Constraint 124 273 5.3209 6.6511 13.3021 0.1893 Constraint 291 498 4.9194 6.1492 12.2985 0.1892 Constraint 69 455 4.4227 5.5284 11.0568 0.1884 Constraint 61 455 4.7355 5.9194 11.8388 0.1884 Constraint 268 408 5.4122 6.7653 13.5306 0.1873 Constraint 61 518 5.7644 7.2055 14.4109 0.1871 Constraint 388 528 5.8785 7.3481 14.6962 0.1870 Constraint 69 383 5.1303 6.4129 12.8259 0.1858 Constraint 273 446 5.3383 6.6728 13.3457 0.1850 Constraint 19 124 4.5938 5.7423 11.4846 0.1844 Constraint 61 359 5.4764 6.8455 13.6910 0.1843 Constraint 44 131 5.4746 6.8432 13.6864 0.1834 Constraint 320 479 5.2771 6.5964 13.1927 0.1832 Constraint 291 518 5.6108 7.0134 14.0269 0.1830 Constraint 399 528 5.5259 6.9073 13.8147 0.1829 Constraint 11 197 5.5100 6.8875 13.7751 0.1826 Constraint 165 374 6.0012 7.5015 15.0031 0.1824 Constraint 105 351 4.5552 5.6940 11.3880 0.1824 Constraint 351 488 5.3530 6.6912 13.3824 0.1822 Constraint 174 446 5.4763 6.8454 13.6909 0.1820 Constraint 69 359 4.1024 5.1280 10.2561 0.1819 Constraint 197 416 4.6858 5.8572 11.7145 0.1817 Constraint 351 508 6.2239 7.7798 15.5596 0.1812 Constraint 260 374 5.1340 6.4175 12.8349 0.1808 Constraint 157 374 4.9343 6.1678 12.3357 0.1798 Constraint 437 538 5.2119 6.5148 13.0297 0.1794 Constraint 61 165 5.2253 6.5317 13.0633 0.1780 Constraint 33 268 5.8769 7.3462 14.6924 0.1774 Constraint 260 428 4.9222 6.1528 12.3055 0.1759 Constraint 197 455 5.6973 7.1216 14.2431 0.1758 Constraint 131 538 6.3027 7.8784 15.7567 0.1758 Constraint 52 131 5.2117 6.5146 13.0292 0.1757 Constraint 335 437 4.7437 5.9296 11.8593 0.1753 Constraint 90 388 4.8342 6.0428 12.0855 0.1752 Constraint 268 399 5.1980 6.4975 12.9950 0.1751 Constraint 52 383 5.0016 6.2520 12.5040 0.1750 Constraint 291 421 5.6444 7.0555 14.1110 0.1746 Constraint 61 383 4.1235 5.1543 10.3087 0.1738 Constraint 308 416 4.9486 6.1857 12.3715 0.1733 Constraint 19 189 5.8552 7.3190 14.6379 0.1733 Constraint 146 320 5.0878 6.3597 12.7194 0.1731 Constraint 308 479 5.5916 6.9895 13.9791 0.1716 Constraint 437 528 4.6625 5.8281 11.6562 0.1716 Constraint 408 508 5.3925 6.7406 13.4813 0.1710 Constraint 146 359 5.8390 7.2988 14.5975 0.1707 Constraint 284 446 4.8960 6.1200 12.2399 0.1703 Constraint 368 462 5.4511 6.8139 13.6279 0.1700 Constraint 343 498 5.3814 6.7267 13.4534 0.1694 Constraint 416 538 5.6995 7.1244 14.2489 0.1693 Constraint 11 343 5.4127 6.7658 13.5317 0.1690 Constraint 124 260 4.4614 5.5767 11.1535 0.1689 Constraint 180 383 5.9532 7.4415 14.8830 0.1687 Constraint 19 291 5.6009 7.0012 14.0023 0.1685 Constraint 299 479 5.0947 6.3684 12.7367 0.1682 Constraint 174 399 4.9191 6.1489 12.2977 0.1680 Constraint 44 228 5.9573 7.4466 14.8933 0.1679 Constraint 206 428 5.2943 6.6179 13.2358 0.1673 Constraint 52 308 5.3841 6.7302 13.4603 0.1667 Constraint 284 359 4.9942 6.2428 12.4856 0.1666 Constraint 139 408 5.8552 7.3190 14.6380 0.1660 Constraint 222 528 4.1588 5.1985 10.3971 0.1659 Constraint 139 437 4.9346 6.1683 12.3366 0.1657 Constraint 197 528 4.5566 5.6958 11.3916 0.1653 Constraint 11 538 5.9173 7.3966 14.7932 0.1653 Constraint 44 260 5.3500 6.6875 13.3750 0.1653 Constraint 383 508 5.4216 6.7770 13.5540 0.1650 Constraint 33 146 5.3042 6.6302 13.2604 0.1648 Constraint 3 518 4.4827 5.6033 11.2066 0.1642 Constraint 291 538 5.7184 7.1480 14.2961 0.1642 Constraint 111 368 5.8433 7.3041 14.6082 0.1637 Constraint 273 471 4.6640 5.8301 11.6601 0.1633 Constraint 19 479 4.1409 5.1761 10.3523 0.1625 Constraint 19 343 4.1414 5.1768 10.3535 0.1625 Constraint 383 498 4.5218 5.6523 11.3046 0.1616 Constraint 24 351 5.0660 6.3325 12.6650 0.1614 Constraint 273 462 4.7591 5.9489 11.8978 0.1607 Constraint 241 428 6.3296 7.9120 15.8240 0.1604 Constraint 44 343 5.7408 7.1760 14.3520 0.1603 Constraint 174 374 5.1302 6.4127 12.8255 0.1601 Constraint 157 455 3.8829 4.8536 9.7072 0.1600 Constraint 374 518 4.2187 5.2734 10.5468 0.1600 Constraint 399 508 5.1844 6.4805 12.9610 0.1599 Constraint 44 508 5.6535 7.0669 14.1337 0.1587 Constraint 455 538 4.7526 5.9407 11.8814 0.1585 Constraint 3 249 5.2236 6.5295 13.0590 0.1584 Constraint 157 260 5.5396 6.9246 13.8491 0.1583 Constraint 197 471 4.3284 5.4105 10.8209 0.1580 Constraint 189 462 4.0778 5.0972 10.1944 0.1580 Constraint 214 488 4.2950 5.3687 10.7374 0.1576 Constraint 69 320 5.4112 6.7640 13.5280 0.1574 Constraint 359 508 5.9238 7.4047 14.8094 0.1573 Constraint 222 455 3.7452 4.6815 9.3630 0.1572 Constraint 268 421 5.7591 7.1989 14.3977 0.1567 Constraint 165 359 5.3876 6.7344 13.4689 0.1566 Constraint 24 222 6.1288 7.6610 15.3220 0.1565 Constraint 197 388 5.4614 6.8268 13.6536 0.1560 Constraint 33 222 4.7812 5.9765 11.9530 0.1557 Constraint 421 518 5.1673 6.4591 12.9181 0.1548 Constraint 228 488 4.8337 6.0421 12.0842 0.1547 Constraint 52 368 3.8366 4.7957 9.5914 0.1545 Constraint 260 446 4.9837 6.2296 12.4592 0.1538 Constraint 90 197 4.3475 5.4343 10.8687 0.1537 Constraint 69 273 4.6596 5.8245 11.6489 0.1530 Constraint 131 359 4.7046 5.8808 11.7615 0.1529 Constraint 11 408 5.3045 6.6306 13.2611 0.1525 Constraint 368 446 5.6947 7.1184 14.2368 0.1521 Constraint 228 518 5.7524 7.1906 14.3811 0.1515 Constraint 3 471 5.7699 7.2124 14.4248 0.1510 Constraint 3 498 5.1537 6.4421 12.8842 0.1509 Constraint 24 308 4.4111 5.5139 11.0279 0.1502 Constraint 33 105 3.3043 4.1303 8.2607 0.1502 Constraint 77 206 4.5979 5.7474 11.4947 0.1501 Constraint 374 462 3.9586 4.9482 9.8965 0.1497 Constraint 139 335 5.3944 6.7430 13.4859 0.1494 Constraint 343 455 5.0116 6.2645 12.5290 0.1492 Constraint 61 320 4.7103 5.8878 11.7757 0.1489 Constraint 19 268 5.4151 6.7688 13.5376 0.1483 Constraint 165 260 4.7160 5.8951 11.7901 0.1482 Constraint 52 284 6.0190 7.5237 15.0474 0.1477 Constraint 44 273 5.4696 6.8370 13.6741 0.1477 Constraint 359 528 5.4539 6.8174 13.6348 0.1476 Constraint 268 446 5.4066 6.7583 13.5165 0.1464 Constraint 3 320 5.1441 6.4301 12.8602 0.1462 Constraint 11 105 5.2413 6.5517 13.1033 0.1457 Constraint 11 249 5.8021 7.2526 14.5051 0.1456 Constraint 124 383 5.1275 6.4094 12.8188 0.1455 Constraint 131 374 4.5873 5.7341 11.4682 0.1451 Constraint 69 284 5.7823 7.2279 14.4558 0.1450 Constraint 19 299 4.6401 5.8001 11.6002 0.1448 Constraint 146 368 6.1879 7.7349 15.4698 0.1447 Constraint 328 428 4.5064 5.6330 11.2660 0.1442 Constraint 139 383 3.9939 4.9923 9.9847 0.1439 Constraint 197 479 5.2318 6.5398 13.0795 0.1435 Constraint 3 268 5.8636 7.3295 14.6590 0.1432 Constraint 52 273 5.4602 6.8253 13.6506 0.1430 Constraint 165 437 5.2883 6.6104 13.2209 0.1429 Constraint 24 328 6.0456 7.5570 15.1140 0.1429 Constraint 241 538 4.4763 5.5953 11.1907 0.1427 Constraint 343 488 4.5878 5.7348 11.4696 0.1427 Constraint 214 508 4.6653 5.8316 11.6633 0.1426 Constraint 24 180 4.8222 6.0278 12.0555 0.1423 Constraint 260 388 4.7928 5.9910 11.9821 0.1410 Constraint 174 249 5.0834 6.3543 12.7085 0.1407 Constraint 343 528 5.5248 6.9060 13.8120 0.1405 Constraint 52 228 3.7988 4.7485 9.4970 0.1404 Constraint 343 446 4.7861 5.9827 11.9653 0.1403 Constraint 180 368 4.5496 5.6870 11.3740 0.1402 Constraint 157 273 5.9494 7.4368 14.8736 0.1394 Constraint 3 84 5.6781 7.0976 14.1953 0.1388 Constraint 131 437 5.2978 6.6223 13.2445 0.1386 Constraint 44 180 6.1676 7.7095 15.4190 0.1382 Constraint 335 498 5.4440 6.8050 13.6101 0.1375 Constraint 157 241 5.1442 6.4302 12.8605 0.1368 Constraint 335 446 5.8443 7.3053 14.6107 0.1362 Constraint 284 437 4.6384 5.7981 11.5961 0.1361 Constraint 189 471 5.1687 6.4609 12.9218 0.1356 Constraint 97 462 4.4671 5.5839 11.1677 0.1353 Constraint 44 299 5.7798 7.2247 14.4495 0.1352 Constraint 299 388 5.6977 7.1221 14.2442 0.1352 Constraint 97 180 5.4884 6.8605 13.7211 0.1343 Constraint 174 428 5.2720 6.5900 13.1800 0.1340 Constraint 61 374 3.5307 4.4134 8.8268 0.1340 Constraint 61 368 4.0760 5.0950 10.1899 0.1340 Constraint 52 374 5.4169 6.7711 13.5422 0.1340 Constraint 299 446 4.7348 5.9185 11.8369 0.1336 Constraint 111 428 5.9413 7.4267 14.8534 0.1330 Constraint 124 291 5.8632 7.3290 14.6580 0.1325 Constraint 24 214 4.8120 6.0150 12.0300 0.1325 Constraint 165 241 5.7659 7.2074 14.4148 0.1325 Constraint 124 374 5.4943 6.8679 13.7358 0.1325 Constraint 111 388 5.6941 7.1177 14.2353 0.1325 Constraint 97 189 5.0858 6.3572 12.7145 0.1325 Constraint 69 222 5.0578 6.3223 12.6446 0.1325 Constraint 24 291 4.3474 5.4343 10.8686 0.1325 Constraint 19 241 4.7188 5.8985 11.7970 0.1325 Constraint 11 260 3.3436 4.1795 8.3590 0.1325 Constraint 131 335 5.7207 7.1508 14.3017 0.1322 Constraint 105 328 5.8810 7.3512 14.7024 0.1319 Constraint 19 180 5.9902 7.4877 14.9755 0.1312 Constraint 399 498 4.2049 5.2561 10.5123 0.1310 Constraint 105 299 6.2370 7.7962 15.5924 0.1307 Constraint 268 455 5.1733 6.4666 12.9332 0.1307 Constraint 165 399 6.1841 7.7301 15.4601 0.1298 Constraint 24 359 5.5484 6.9355 13.8711 0.1298 Constraint 328 508 5.7544 7.1930 14.3860 0.1297 Constraint 3 189 5.6543 7.0679 14.1358 0.1289 Constraint 368 455 4.4811 5.6014 11.2027 0.1287 Constraint 52 291 5.1050 6.3813 12.7625 0.1281 Constraint 359 471 5.5778 6.9722 13.9444 0.1275 Constraint 180 437 5.7752 7.2190 14.4380 0.1269 Constraint 174 343 6.0832 7.6040 15.2080 0.1269 Constraint 52 320 5.8053 7.2566 14.5132 0.1269 Constraint 139 249 5.6744 7.0930 14.1860 0.1267 Constraint 408 538 6.0749 7.5936 15.1871 0.1262 Constraint 197 437 5.3132 6.6415 13.2829 0.1258 Constraint 11 111 5.6663 7.0828 14.1657 0.1257 Constraint 90 228 5.4544 6.8179 13.6359 0.1254 Constraint 139 374 5.9021 7.3776 14.7552 0.1254 Constraint 131 383 6.0271 7.5339 15.0678 0.1254 Constraint 3 131 3.9070 4.8838 9.7676 0.1249 Constraint 24 268 5.8248 7.2810 14.5620 0.1248 Constraint 291 462 4.5691 5.7114 11.4229 0.1247 Constraint 157 351 4.6808 5.8510 11.7019 0.1247 Constraint 105 388 4.4974 5.6217 11.2434 0.1237 Constraint 3 421 4.1077 5.1346 10.2692 0.1235 Constraint 97 197 5.9936 7.4920 14.9840 0.1234 Constraint 268 416 5.3115 6.6394 13.2788 0.1230 Constraint 105 308 4.7316 5.9145 11.8290 0.1229 Constraint 368 479 5.8791 7.3489 14.6978 0.1228 Constraint 124 320 4.7428 5.9286 11.8571 0.1227 Constraint 90 528 4.1608 5.2010 10.4019 0.1227 Constraint 69 228 4.6396 5.7995 11.5989 0.1227 Constraint 320 508 5.5993 6.9991 13.9982 0.1224 Constraint 24 228 4.5770 5.7212 11.4424 0.1224 Constraint 19 228 5.8678 7.3347 14.6694 0.1224 Constraint 33 214 5.1446 6.4307 12.8614 0.1223 Constraint 77 538 4.0925 5.1156 10.2312 0.1222 Constraint 206 508 4.6775 5.8468 11.6936 0.1219 Constraint 24 428 5.0733 6.3417 12.6834 0.1217 Constraint 11 421 6.1173 7.6467 15.2933 0.1217 Constraint 368 498 4.2740 5.3425 10.6851 0.1210 Constraint 189 421 5.3971 6.7464 13.4929 0.1210 Constraint 11 268 3.7495 4.6868 9.3737 0.1210 Constraint 268 471 5.9021 7.3776 14.7552 0.1208 Constraint 3 206 5.1121 6.3902 12.7803 0.1205 Constraint 260 437 5.2984 6.6230 13.2460 0.1205 Constraint 260 399 4.3172 5.3965 10.7930 0.1204 Constraint 374 488 4.6506 5.8132 11.6264 0.1202 Constraint 416 508 5.8009 7.2511 14.5022 0.1201 Constraint 105 383 4.7596 5.9495 11.8991 0.1198 Constraint 284 416 4.9363 6.1704 12.3409 0.1197 Constraint 124 359 5.4537 6.8171 13.6342 0.1188 Constraint 260 528 6.2686 7.8357 15.6714 0.1182 Constraint 249 518 3.9718 4.9648 9.9296 0.1170 Constraint 335 455 5.2376 6.5471 13.0941 0.1170 Constraint 77 189 5.8288 7.2860 14.5720 0.1170 Constraint 131 428 3.8341 4.7926 9.5853 0.1165 Constraint 3 538 3.8750 4.8437 9.6875 0.1154 Constraint 206 462 5.9193 7.3991 14.7983 0.1151 Constraint 97 174 5.9780 7.4725 14.9449 0.1148 Constraint 33 111 5.2544 6.5680 13.1359 0.1147 Constraint 174 273 6.0744 7.5930 15.1859 0.1141 Constraint 241 455 5.2500 6.5625 13.1250 0.1140 Constraint 328 437 6.0459 7.5574 15.1149 0.1138 Constraint 174 408 5.4687 6.8359 13.6718 0.1134 Constraint 189 479 3.9836 4.9795 9.9590 0.1129 Constraint 19 273 4.8146 6.0182 12.0364 0.1124 Constraint 328 488 5.1530 6.4413 12.8826 0.1122 Constraint 157 416 4.6953 5.8691 11.7382 0.1120 Constraint 146 428 4.5285 5.6607 11.3213 0.1120 Constraint 44 488 4.8288 6.0360 12.0720 0.1120 Constraint 197 462 5.4647 6.8309 13.6617 0.1115 Constraint 174 479 6.1512 7.6890 15.3780 0.1115 Constraint 165 455 5.0901 6.3626 12.7251 0.1115 Constraint 131 471 6.0244 7.5305 15.0610 0.1115 Constraint 3 284 6.1821 7.7277 15.4553 0.1115 Constraint 351 437 5.4855 6.8568 13.7137 0.1112 Constraint 11 90 5.5346 6.9183 13.8365 0.1110 Constraint 24 174 3.6650 4.5813 9.1625 0.1107 Constraint 3 105 5.9487 7.4358 14.8717 0.1103 Constraint 249 399 5.6912 7.1139 14.2279 0.1096 Constraint 90 308 5.3633 6.7042 13.4083 0.1093 Constraint 157 284 5.0284 6.2855 12.5709 0.1083 Constraint 33 359 5.9321 7.4152 14.8304 0.1077 Constraint 24 383 5.2758 6.5948 13.1896 0.1076 Constraint 3 146 5.0581 6.3226 12.6452 0.1075 Constraint 146 498 5.2912 6.6140 13.2279 0.1070 Constraint 61 249 5.4496 6.8120 13.6241 0.1068 Constraint 180 273 5.0152 6.2689 12.5379 0.1068 Constraint 214 320 5.1872 6.4839 12.9679 0.1068 Constraint 105 174 5.6960 7.1200 14.2401 0.1068 Constraint 90 189 6.1923 7.7404 15.4808 0.1068 Constraint 52 299 3.7156 4.6445 9.2891 0.1068 Constraint 335 488 5.4123 6.7653 13.5307 0.1066 Constraint 368 488 3.3912 4.2390 8.4780 0.1059 Constraint 320 498 5.0236 6.2795 12.5590 0.1055 Constraint 131 498 5.2178 6.5222 13.0444 0.1052 Constraint 299 528 5.9194 7.3993 14.7986 0.1049 Constraint 222 428 4.4241 5.5301 11.0602 0.1049 Constraint 189 437 6.3360 7.9200 15.8400 0.1049 Constraint 174 462 5.8100 7.2625 14.5250 0.1049 Constraint 174 455 4.2779 5.3474 10.6948 0.1049 Constraint 174 421 5.5953 6.9941 13.9882 0.1049 Constraint 174 351 5.2008 6.5010 13.0019 0.1049 Constraint 165 462 3.9388 4.9235 9.8470 0.1049 Constraint 157 421 5.7832 7.2290 14.4581 0.1049 Constraint 157 388 5.1954 6.4942 12.9884 0.1049 Constraint 139 498 6.1463 7.6828 15.3657 0.1049 Constraint 139 479 5.9335 7.4169 14.8338 0.1049 Constraint 124 388 6.3439 7.9299 15.8598 0.1049 Constraint 105 180 3.6148 4.5186 9.0371 0.1049 Constraint 84 189 4.8986 6.1233 12.2465 0.1049 Constraint 61 328 6.3086 7.8857 15.7714 0.1049 Constraint 24 249 6.1672 7.7090 15.4179 0.1049 Constraint 19 249 5.1961 6.4952 12.9903 0.1049 Constraint 44 124 4.7632 5.9540 11.9079 0.1049 Constraint 97 446 5.3785 6.7232 13.4463 0.1044 Constraint 335 508 4.5705 5.7131 11.4261 0.1041 Constraint 291 508 4.8744 6.0930 12.1860 0.1040 Constraint 24 139 5.7631 7.2039 14.4078 0.1039 Constraint 111 268 5.1049 6.3811 12.7622 0.1034 Constraint 260 538 5.7331 7.1664 14.3328 0.1029 Constraint 33 437 5.7937 7.2422 14.4844 0.1028 Constraint 131 399 4.9361 6.1701 12.3402 0.1024 Constraint 33 260 5.2951 6.6189 13.2378 0.1016 Constraint 44 498 5.7535 7.1918 14.3836 0.1014 Constraint 249 368 4.3108 5.3885 10.7769 0.1011 Constraint 33 399 5.0125 6.2656 12.5312 0.1008 Constraint 11 146 5.3648 6.7060 13.4119 0.1003 Constraint 180 479 4.3961 5.4952 10.9903 0.1001 Constraint 97 268 4.6808 5.8510 11.7019 0.0998 Constraint 249 528 4.8738 6.0923 12.1845 0.0988 Constraint 11 399 5.5078 6.8847 13.7694 0.0982 Constraint 241 335 4.9750 6.2188 12.4375 0.0977 Constraint 249 538 4.9276 6.1595 12.3190 0.0977 Constraint 189 273 4.8192 6.0240 12.0481 0.0971 Constraint 241 421 4.8300 6.0375 12.0749 0.0969 Constraint 61 291 5.6503 7.0629 14.1258 0.0967 Constraint 11 299 5.1858 6.4822 12.9644 0.0962 Constraint 228 351 5.3417 6.6772 13.3544 0.0960 Constraint 11 131 5.4932 6.8664 13.7329 0.0958 Constraint 33 479 5.5004 6.8756 13.7511 0.0954 Constraint 61 189 3.7979 4.7474 9.4948 0.0949 Constraint 52 189 5.7148 7.1434 14.2869 0.0949 Constraint 52 180 5.0414 6.3017 12.6035 0.0949 Constraint 44 189 5.8265 7.2832 14.5664 0.0949 Constraint 33 180 4.6052 5.7565 11.5131 0.0949 Constraint 24 165 5.4378 6.7972 13.5944 0.0949 Constraint 19 222 4.2506 5.3132 10.6265 0.0949 Constraint 3 214 5.0816 6.3520 12.7040 0.0929 Constraint 249 446 4.9782 6.2228 12.4455 0.0925 Constraint 174 320 6.2278 7.7847 15.5695 0.0922 Constraint 383 462 5.4213 6.7766 13.5532 0.0917 Constraint 105 462 4.6074 5.7593 11.5185 0.0915 Constraint 189 359 4.9629 6.2036 12.4072 0.0914 Constraint 214 518 5.7051 7.1313 14.2627 0.0902 Constraint 228 479 5.1588 6.4485 12.8970 0.0901 Constraint 428 518 5.9782 7.4727 14.9455 0.0894 Constraint 157 408 6.3307 7.9134 15.8268 0.0887 Constraint 343 508 5.7261 7.1576 14.3152 0.0880 Constraint 84 308 4.4894 5.6118 11.2235 0.0874 Constraint 189 446 5.2960 6.6199 13.2399 0.0873 Constraint 24 462 4.3891 5.4864 10.9729 0.0867 Constraint 228 538 4.4438 5.5547 11.1094 0.0865 Constraint 299 471 4.5627 5.7034 11.4068 0.0863 Constraint 97 479 5.0313 6.2891 12.5781 0.0861 Constraint 90 479 6.0543 7.5679 15.1358 0.0861 Constraint 3 90 5.5860 6.9825 13.9651 0.0855 Constraint 146 383 6.2293 7.7866 15.5733 0.0847 Constraint 77 416 5.4857 6.8571 13.7141 0.0842 Constraint 320 421 5.3652 6.7065 13.4130 0.0835 Constraint 11 528 4.8501 6.0626 12.1253 0.0832 Constraint 33 328 5.2843 6.6053 13.2106 0.0829 Constraint 11 508 5.3949 6.7436 13.4872 0.0828 Constraint 214 399 4.9489 6.1861 12.3722 0.0826 Constraint 124 416 5.2289 6.5362 13.0723 0.0825 Constraint 284 488 5.8551 7.3189 14.6378 0.0825 Constraint 180 249 5.9705 7.4631 14.9262 0.0819 Constraint 19 408 5.0724 6.3405 12.6811 0.0817 Constraint 24 518 4.9613 6.2016 12.4032 0.0812 Constraint 97 249 4.9757 6.2196 12.4392 0.0811 Constraint 165 416 4.9859 6.2324 12.4649 0.0794 Constraint 77 157 4.8589 6.0737 12.1473 0.0794 Constraint 146 299 5.4725 6.8407 13.6813 0.0794 Constraint 11 308 4.8863 6.1079 12.2158 0.0783 Constraint 428 538 5.4812 6.8516 13.7031 0.0780 Constraint 335 428 3.5272 4.4090 8.8180 0.0780 Constraint 44 479 3.9341 4.9176 9.8352 0.0780 Constraint 3 399 5.0803 6.3504 12.7009 0.0780 Constraint 268 508 5.0910 6.3638 12.7275 0.0778 Constraint 24 111 5.1869 6.4836 12.9671 0.0777 Constraint 52 165 5.7895 7.2368 14.4737 0.0776 Constraint 165 446 3.7973 4.7466 9.4933 0.0771 Constraint 157 446 3.9498 4.9372 9.8744 0.0771 Constraint 52 518 4.9697 6.2121 12.4242 0.0760 Constraint 284 479 5.6727 7.0909 14.1817 0.0759 Constraint 197 518 5.2096 6.5120 13.0239 0.0756 Constraint 52 455 4.6714 5.8392 11.6784 0.0751 Constraint 206 518 4.7177 5.8971 11.7942 0.0743 Constraint 69 249 5.1439 6.4298 12.8597 0.0742 Constraint 61 260 5.2904 6.6130 13.2260 0.0741 Constraint 84 518 5.4750 6.8437 13.6874 0.0740 Constraint 111 273 5.5021 6.8776 13.7553 0.0739 Constraint 11 84 4.7841 5.9801 11.9603 0.0737 Constraint 3 408 4.8675 6.0844 12.1687 0.0736 Constraint 139 528 5.4564 6.8205 13.6410 0.0730 Constraint 124 528 5.6597 7.0746 14.1491 0.0730 Constraint 335 416 6.1884 7.7355 15.4710 0.0726 Constraint 3 228 4.3943 5.4929 10.9858 0.0725 Constraint 214 437 6.2931 7.8663 15.7327 0.0715 Constraint 111 335 4.7979 5.9974 11.9949 0.0709 Constraint 228 455 5.0928 6.3660 12.7319 0.0709 Constraint 52 197 4.8923 6.1154 12.2308 0.0708 Constraint 19 146 5.6685 7.0856 14.1713 0.0705 Constraint 241 446 3.7231 4.6539 9.3079 0.0696 Constraint 3 174 5.1773 6.4717 12.9433 0.0696 Constraint 77 368 5.6961 7.1201 14.2403 0.0695 Constraint 343 479 5.8145 7.2681 14.5362 0.0694 Constraint 222 446 4.6235 5.7794 11.5587 0.0693 Constraint 335 518 5.6061 7.0076 14.0152 0.0690 Constraint 180 498 4.7506 5.9382 11.8764 0.0690 Constraint 174 299 4.4152 5.5190 11.0379 0.0689 Constraint 320 518 5.8582 7.3228 14.6456 0.0689 Constraint 19 538 3.2697 4.0871 8.1741 0.0687 Constraint 222 437 5.2009 6.5012 13.0023 0.0686 Constraint 273 508 5.3041 6.6302 13.2604 0.0684 Constraint 69 189 5.5828 6.9785 13.9569 0.0682 Constraint 52 249 4.5048 5.6310 11.2619 0.0676 Constraint 105 446 4.2984 5.3731 10.7461 0.0674 Constraint 284 538 3.7376 4.6720 9.3439 0.0672 Constraint 260 421 6.0492 7.5615 15.1230 0.0672 Constraint 124 437 4.7405 5.9256 11.8512 0.0667 Constraint 3 343 5.8266 7.2832 14.5665 0.0666 Constraint 268 528 5.6758 7.0947 14.1895 0.0665 Constraint 3 197 6.0645 7.5807 15.1613 0.0661 Constraint 11 388 3.2769 4.0962 8.1923 0.0660 Constraint 228 388 5.1954 6.4942 12.9884 0.0659 Constraint 174 260 5.0779 6.3474 12.6948 0.0656 Constraint 19 284 3.5029 4.3786 8.7572 0.0652 Constraint 284 428 4.8243 6.0304 12.0609 0.0650 Constraint 69 343 6.1692 7.7115 15.4231 0.0647 Constraint 111 260 5.1704 6.4629 12.9259 0.0644 Constraint 124 538 4.6426 5.8033 11.6066 0.0643 Constraint 90 518 4.5493 5.6866 11.3732 0.0643 Constraint 69 538 4.1739 5.2174 10.4348 0.0643 Constraint 90 249 5.5928 6.9911 13.9821 0.0640 Constraint 383 528 5.5704 6.9630 13.9259 0.0633 Constraint 11 180 4.6581 5.8226 11.6452 0.0633 Constraint 351 446 6.0290 7.5363 15.0725 0.0625 Constraint 249 437 4.1601 5.2001 10.4002 0.0621 Constraint 3 479 5.4674 6.8342 13.6684 0.0614 Constraint 24 388 5.0725 6.3406 12.6813 0.0608 Constraint 228 320 5.0309 6.2886 12.5772 0.0605 Constraint 399 518 4.8041 6.0051 12.0102 0.0604 Constraint 206 528 5.0167 6.2709 12.5418 0.0604 Constraint 197 538 5.0623 6.3279 12.6559 0.0604 Constraint 146 408 5.4131 6.7663 13.5327 0.0597 Constraint 249 508 4.8678 6.0847 12.1695 0.0593 Constraint 19 383 5.5244 6.9055 13.8110 0.0590 Constraint 33 249 5.3931 6.7413 13.4827 0.0589 Constraint 97 471 5.2138 6.5173 13.0345 0.0588 Constraint 77 374 5.1392 6.4240 12.8480 0.0585 Constraint 180 351 5.5995 6.9994 13.9987 0.0578 Constraint 131 408 5.2243 6.5304 13.0608 0.0575 Constraint 84 508 4.7066 5.8833 11.7666 0.0562 Constraint 19 157 5.2910 6.6137 13.2274 0.0561 Constraint 24 131 3.5583 4.4479 8.8958 0.0561 Constraint 44 165 4.6734 5.8418 11.6836 0.0560 Constraint 165 408 6.1764 7.7205 15.4410 0.0559 Constraint 249 428 5.6763 7.0954 14.1908 0.0555 Constraint 11 437 5.3886 6.7358 13.4716 0.0554 Constraint 3 437 6.0461 7.5576 15.1153 0.0554 Constraint 180 359 3.7446 4.6807 9.3615 0.0551 Constraint 157 462 4.7726 5.9658 11.9315 0.0551 Constraint 139 308 4.5996 5.7495 11.4991 0.0549 Constraint 52 446 5.3480 6.6850 13.3701 0.0546 Constraint 3 139 6.3025 7.8782 15.7563 0.0543 Constraint 3 359 5.6417 7.0521 14.1043 0.0542 Constraint 24 471 4.7133 5.8916 11.7833 0.0541 Constraint 189 498 5.8461 7.3077 14.6153 0.0533 Constraint 52 335 5.2732 6.5916 13.1831 0.0526 Constraint 3 446 5.4846 6.8558 13.7116 0.0526 Constraint 399 538 5.1308 6.4135 12.8269 0.0524 Constraint 284 528 3.3796 4.2245 8.4490 0.0517 Constraint 284 518 5.9706 7.4632 14.9264 0.0517 Constraint 284 508 3.6203 4.5254 9.0508 0.0517 Constraint 44 249 5.4307 6.7883 13.5767 0.0513 Constraint 335 479 5.3951 6.7439 13.4879 0.0510 Constraint 124 368 4.2041 5.2552 10.5103 0.0509 Constraint 52 471 5.0539 6.3174 12.6347 0.0509 Constraint 52 462 6.0831 7.6039 15.2079 0.0509 Constraint 24 124 4.7749 5.9686 11.9372 0.0507 Constraint 24 498 4.1140 5.1425 10.2850 0.0505 Constraint 19 139 4.1656 5.2070 10.4140 0.0501 Constraint 11 488 5.2008 6.5010 13.0020 0.0497 Constraint 124 284 5.7768 7.2211 14.4421 0.0494 Constraint 351 528 5.2846 6.6058 13.2115 0.0490 Constraint 111 249 3.8148 4.7686 9.5371 0.0486 Constraint 52 538 5.6553 7.0691 14.1382 0.0482 Constraint 52 528 4.7082 5.8853 11.7705 0.0482 Constraint 19 528 6.0918 7.6148 15.2296 0.0482 Constraint 249 416 4.6851 5.8564 11.7129 0.0480 Constraint 19 428 5.6126 7.0157 14.0314 0.0480 Constraint 24 146 6.2221 7.7776 15.5552 0.0479 Constraint 284 462 3.4703 4.3379 8.6757 0.0474 Constraint 111 291 4.2473 5.3091 10.6181 0.0474 Constraint 84 462 4.6506 5.8133 11.6266 0.0474 Constraint 273 488 5.0803 6.3504 12.7007 0.0474 Constraint 111 374 5.0865 6.3581 12.7162 0.0472 Constraint 368 508 5.7336 7.1670 14.3341 0.0471 Constraint 124 308 4.5194 5.6492 11.2984 0.0468 Constraint 69 462 4.6043 5.7554 11.5108 0.0468 Constraint 61 498 5.0377 6.2971 12.5943 0.0468 Constraint 61 462 4.1071 5.1339 10.2677 0.0468 Constraint 33 462 5.5933 6.9916 13.9833 0.0468 Constraint 33 368 4.7598 5.9497 11.8994 0.0468 Constraint 24 437 4.4368 5.5460 11.0920 0.0468 Constraint 3 328 5.9302 7.4127 14.8254 0.0466 Constraint 11 328 6.0804 7.6005 15.2011 0.0466 Constraint 44 291 4.4500 5.5625 11.1250 0.0464 Constraint 11 139 4.2706 5.3382 10.6764 0.0461 Constraint 383 538 4.4261 5.5326 11.0653 0.0461 Constraint 157 437 5.0693 6.3367 12.6733 0.0454 Constraint 33 528 5.8640 7.3300 14.6599 0.0453 Constraint 52 268 5.3679 6.7099 13.4199 0.0453 Constraint 52 260 5.0746 6.3432 12.6865 0.0453 Constraint 320 538 5.4091 6.7614 13.5228 0.0446 Constraint 308 538 4.0583 5.0729 10.1457 0.0440 Constraint 139 462 4.6476 5.8095 11.6189 0.0440 Constraint 139 455 5.3266 6.6582 13.3164 0.0440 Constraint 139 446 3.3740 4.2175 8.4350 0.0440 Constraint 3 388 5.5644 6.9556 13.9111 0.0440 Constraint 19 498 5.5388 6.9235 13.8470 0.0439 Constraint 19 455 4.0781 5.0976 10.1952 0.0439 Constraint 335 528 5.6649 7.0811 14.1622 0.0433 Constraint 249 455 5.1140 6.3926 12.7851 0.0433 Constraint 228 328 4.8111 6.0139 12.0278 0.0433 Constraint 180 343 5.6488 7.0610 14.1219 0.0433 Constraint 33 284 3.8158 4.7697 9.5394 0.0433 Constraint 77 320 6.1736 7.7170 15.4339 0.0425 Constraint 44 335 4.9583 6.1978 12.3957 0.0425 Constraint 328 528 5.3734 6.7167 13.4335 0.0424 Constraint 308 518 5.2791 6.5989 13.1979 0.0420 Constraint 299 518 6.3131 7.8913 15.7827 0.0420 Constraint 206 374 3.1426 3.9283 7.8566 0.0420 Constraint 52 508 5.1892 6.4865 12.9730 0.0411 Constraint 19 508 5.2320 6.5400 13.0800 0.0408 Constraint 124 428 5.1788 6.4735 12.9470 0.0406 Constraint 343 518 5.8256 7.2820 14.5639 0.0401 Constraint 351 462 4.4342 5.5427 11.0854 0.0401 Constraint 3 165 4.2394 5.2992 10.5984 0.0401 Constraint 189 428 5.1896 6.4869 12.9739 0.0399 Constraint 90 446 4.9293 6.1616 12.3233 0.0395 Constraint 249 421 6.0816 7.6020 15.2040 0.0390 Constraint 146 538 6.1192 7.6490 15.2981 0.0387 Constraint 139 538 4.1690 5.2113 10.4226 0.0387 Constraint 3 157 5.6598 7.0748 14.1495 0.0382 Constraint 374 538 4.9644 6.2055 12.4111 0.0381 Constraint 359 498 5.1272 6.4090 12.8180 0.0381 Constraint 131 446 5.4850 6.8562 13.7124 0.0381 Constraint 180 518 5.0273 6.2841 12.5683 0.0370 Constraint 157 518 4.5071 5.6339 11.2677 0.0370 Constraint 44 351 4.7710 5.9638 11.9275 0.0370 Constraint 69 260 5.8067 7.2583 14.5166 0.0355 Constraint 11 214 6.0050 7.5062 15.0125 0.0355 Constraint 146 416 6.2427 7.8034 15.6068 0.0355 Constraint 61 228 5.1795 6.4743 12.9487 0.0355 Constraint 11 518 5.3535 6.6918 13.3837 0.0350 Constraint 241 437 5.8029 7.2537 14.5073 0.0344 Constraint 222 308 5.0096 6.2620 12.5240 0.0344 Constraint 228 446 5.8008 7.2511 14.5021 0.0341 Constraint 228 437 4.4230 5.5287 11.0574 0.0341 Constraint 165 518 5.8408 7.3010 14.6021 0.0341 Constraint 146 518 5.2508 6.5635 13.1270 0.0341 Constraint 139 518 4.9642 6.2052 12.4104 0.0341 Constraint 131 508 5.4941 6.8676 13.7352 0.0322 Constraint 52 328 5.9074 7.3843 14.7686 0.0322 Constraint 52 241 5.6947 7.1184 14.2369 0.0322 Constraint 24 538 4.1808 5.2260 10.4519 0.0322 Constraint 24 528 4.7146 5.8932 11.7865 0.0322 Constraint 19 131 5.1079 6.3849 12.7699 0.0322 Constraint 11 455 5.2269 6.5336 13.0672 0.0322 Constraint 11 446 5.8043 7.2553 14.5107 0.0322 Constraint 3 416 5.9106 7.3882 14.7764 0.0320 Constraint 24 455 4.3885 5.4857 10.9713 0.0307 Constraint 228 428 5.9803 7.4753 14.9507 0.0305 Constraint 180 508 5.6346 7.0433 14.0866 0.0305 Constraint 180 488 5.6346 7.0433 14.0866 0.0305 Constraint 157 498 4.1899 5.2373 10.4747 0.0305 Constraint 139 416 5.7993 7.2491 14.4983 0.0304 Constraint 416 518 5.4353 6.7942 13.5883 0.0300 Constraint 84 157 3.8094 4.7617 9.5234 0.0300 Constraint 19 518 3.9566 4.9458 9.8916 0.0289 Constraint 374 528 4.8851 6.1064 12.2128 0.0289 Constraint 359 518 4.0867 5.1084 10.2169 0.0286 Constraint 228 299 5.8658 7.3322 14.6645 0.0275 Constraint 139 508 4.8895 6.1119 12.2238 0.0275 Constraint 111 416 6.1759 7.7198 15.4397 0.0275 Constraint 111 408 5.5062 6.8827 13.7654 0.0275 Constraint 111 383 3.4301 4.2876 8.5753 0.0275 Constraint 111 359 4.4561 5.5701 11.1402 0.0275 Constraint 111 351 6.1038 7.6297 15.2594 0.0275 Constraint 84 528 6.2631 7.8288 15.6576 0.0275 Constraint 61 174 5.5366 6.9208 13.8416 0.0275 Constraint 52 479 6.2078 7.7598 15.5195 0.0275 Constraint 33 228 4.7142 5.8927 11.7854 0.0275 Constraint 11 284 6.0484 7.5605 15.1211 0.0275 Constraint 11 241 4.6321 5.7901 11.5803 0.0275 Constraint 111 446 5.6440 7.0550 14.1101 0.0271 Constraint 3 97 4.3483 5.4353 10.8707 0.0261 Constraint 44 446 5.9109 7.3886 14.7772 0.0260 Constraint 388 538 4.6906 5.8633 11.7266 0.0254 Constraint 3 528 5.7908 7.2385 14.4771 0.0250 Constraint 3 508 3.2479 4.0598 8.1197 0.0250 Constraint 19 308 5.4284 6.7855 13.5711 0.0240 Constraint 11 157 5.1262 6.4077 12.8154 0.0239 Constraint 111 421 5.9950 7.4937 14.9874 0.0234 Constraint 105 421 6.3230 7.9037 15.8074 0.0234 Constraint 90 462 4.0708 5.0884 10.1769 0.0234 Constraint 90 157 5.8768 7.3460 14.6920 0.0234 Constraint 69 479 5.9389 7.4237 14.8473 0.0234 Constraint 69 471 5.9154 7.3943 14.7885 0.0234 Constraint 61 488 4.3711 5.4639 10.9278 0.0234 Constraint 52 498 1.8788 2.3485 4.6971 0.0234 Constraint 52 488 5.4696 6.8370 13.6740 0.0234 Constraint 52 428 5.4785 6.8482 13.6963 0.0234 Constraint 24 416 4.1107 5.1384 10.2768 0.0234 Constraint 19 437 5.0328 6.2910 12.5820 0.0234 Constraint 24 446 3.4740 4.3425 8.6851 0.0234 Constraint 146 508 5.4429 6.8036 13.6072 0.0226 Constraint 77 260 5.9747 7.4684 14.9369 0.0222 Constraint 61 284 3.8177 4.7721 9.5442 0.0222 Constraint 421 538 5.5111 6.8888 13.7776 0.0220 Constraint 343 538 6.1933 7.7416 15.4832 0.0220 Constraint 180 428 4.9684 6.2105 12.4210 0.0220 Constraint 180 408 3.8882 4.8602 9.7205 0.0220 Constraint 180 335 3.4296 4.2870 8.5741 0.0220 Constraint 174 508 6.3295 7.9119 15.8238 0.0220 Constraint 174 437 4.2946 5.3683 10.7365 0.0220 Constraint 174 335 5.4704 6.8380 13.6759 0.0220 Constraint 146 388 5.6249 7.0311 14.0623 0.0220 Constraint 139 388 6.3800 7.9750 15.9500 0.0220 Constraint 131 455 4.2406 5.3007 10.6015 0.0220 Constraint 97 165 6.0457 7.5571 15.1143 0.0220 Constraint 69 368 5.6538 7.0672 14.1344 0.0220 Constraint 61 388 5.0970 6.3712 12.7424 0.0220 Constraint 19 399 5.3001 6.6251 13.2502 0.0220 Constraint 19 388 3.4129 4.2661 8.5323 0.0220 Constraint 44 111 4.1767 5.2209 10.4418 0.0216 Constraint 19 111 5.1830 6.4788 12.9575 0.0216 Constraint 351 538 5.8943 7.3679 14.7358 0.0205 Constraint 291 528 6.2482 7.8102 15.6205 0.0205 Constraint 146 374 6.0549 7.5687 15.1373 0.0205 Constraint 139 320 5.0097 6.2621 12.5242 0.0205 Constraint 52 343 3.7578 4.6972 9.3944 0.0205 Constraint 44 455 6.3703 7.9629 15.9259 0.0205 Constraint 19 446 4.1405 5.1756 10.3512 0.0205 Constraint 19 421 6.0953 7.6192 15.2384 0.0205 Constraint 3 488 4.8421 6.0526 12.1052 0.0205 Constraint 3 455 4.1288 5.1610 10.3219 0.0205 Constraint 3 308 4.3119 5.3899 10.7799 0.0205 Constraint 3 180 4.2375 5.2969 10.5938 0.0205 Constraint 90 180 5.9678 7.4597 14.9195 0.0203 Constraint 24 508 3.6884 4.6105 9.2210 0.0197 Constraint 111 343 5.3818 6.7273 13.4546 0.0197 Constraint 11 359 5.2659 6.5823 13.1647 0.0197 Constraint 77 228 6.0453 7.5566 15.1131 0.0196 Constraint 228 421 5.7910 7.2388 14.4775 0.0185 Constraint 105 518 5.4750 6.8437 13.6874 0.0185 Constraint 97 518 4.5048 5.6310 11.2620 0.0185 Constraint 97 508 6.3712 7.9640 15.9279 0.0185 Constraint 228 462 5.8708 7.3384 14.6769 0.0179 Constraint 19 165 5.7374 7.1718 14.3436 0.0179 Constraint 11 165 5.6626 7.0783 14.1565 0.0179 Constraint 351 479 5.7104 7.1380 14.2760 0.0177 Constraint 157 249 4.7138 5.8922 11.7844 0.0177 Constraint 146 446 3.9784 4.9730 9.9460 0.0177 Constraint 111 471 3.6325 4.5406 9.0812 0.0177 Constraint 111 462 6.0355 7.5443 15.0887 0.0177 Constraint 90 538 3.2888 4.1110 8.2219 0.0177 Constraint 84 538 6.3866 7.9832 15.9664 0.0177 Constraint 61 508 4.6780 5.8475 11.6950 0.0177 Constraint 165 343 3.9363 4.9203 9.8406 0.0172 Constraint 299 508 5.6103 7.0128 14.0256 0.0161 Constraint 268 538 4.6426 5.8033 11.6066 0.0161 Constraint 214 538 3.5805 4.4756 8.9512 0.0161 Constraint 206 538 4.1739 5.2174 10.4348 0.0161 Constraint 189 538 5.6224 7.0279 14.0559 0.0161 Constraint 189 528 4.8905 6.1131 12.2263 0.0161 Constraint 84 446 4.2607 5.3259 10.6518 0.0161 Constraint 189 488 6.2627 7.8284 15.6568 0.0160 Constraint 44 518 5.9962 7.4952 14.9904 0.0160 Constraint 197 508 6.0904 7.6130 15.2259 0.0153 Constraint 197 498 4.7383 5.9229 11.8458 0.0146 Constraint 197 488 5.8262 7.2828 14.5655 0.0146 Constraint 189 518 5.9268 7.4085 14.8171 0.0146 Constraint 157 479 5.3446 6.6807 13.3614 0.0146 Constraint 44 359 5.2149 6.5187 13.0374 0.0146 Constraint 351 518 4.2756 5.3445 10.6891 0.0131 Constraint 157 528 5.1420 6.4274 12.8549 0.0131 Constraint 24 284 4.3644 5.4556 10.9111 0.0131 Constraint 11 189 6.3029 7.8786 15.7573 0.0125 Constraint 206 488 4.3939 5.4924 10.9848 0.0117 Constraint 11 351 5.0485 6.3106 12.6213 0.0107 Constraint 111 180 6.2516 7.8145 15.6291 0.0098 Constraint 90 174 3.9832 4.9790 9.9579 0.0098 Constraint 268 518 5.6943 7.1179 14.2358 0.0091 Constraint 3 368 5.3966 6.7457 13.4914 0.0083 Constraint 328 518 5.8447 7.3059 14.6118 0.0080 Constraint 320 528 5.4233 6.7792 13.5584 0.0080 Constraint 308 508 4.2159 5.2698 10.5397 0.0080 Constraint 268 428 5.1594 6.4493 12.8985 0.0080 Constraint 260 518 5.5692 6.9615 13.9230 0.0080 Constraint 189 508 2.6000 3.2500 6.5001 0.0080 Constraint 165 498 5.8785 7.3482 14.6964 0.0080 Constraint 111 518 6.0063 7.5079 15.0158 0.0080 Constraint 84 479 4.9502 6.1877 12.3754 0.0080 Constraint 84 471 4.2695 5.3369 10.6738 0.0080 Constraint 33 374 5.8566 7.3208 14.6416 0.0080 Constraint 19 471 3.4007 4.2508 8.5016 0.0073 Constraint 19 462 6.3094 7.8867 15.7734 0.0073 Constraint 11 471 4.8717 6.0896 12.1793 0.0073 Constraint 11 462 4.3117 5.3897 10.7794 0.0073 Constraint 284 498 6.0855 7.6069 15.2137 0.0066 Constraint 174 538 5.5100 6.8876 13.7751 0.0066 Constraint 174 528 5.6880 7.1100 14.2201 0.0066 Constraint 174 518 3.0453 3.8066 7.6131 0.0066 Constraint 165 538 5.7418 7.1772 14.3544 0.0066 Constraint 165 528 4.6738 5.8422 11.6844 0.0066 Constraint 157 508 5.8490 7.3113 14.6225 0.0066 Constraint 157 488 6.1454 7.6817 15.3635 0.0066 Constraint 146 528 5.2427 6.5534 13.1069 0.0066 Constraint 131 518 6.3114 7.8892 15.7785 0.0066 Constraint 33 446 4.6604 5.8255 11.6509 0.0055 Constraint 157 320 6.3154 7.8943 15.7885 0.0037 Constraint 105 471 5.7546 7.1933 14.3866 0.0037 Constraint 24 488 3.6020 4.5025 9.0050 0.0037 Constraint 111 299 4.9238 6.1548 12.3095 0.0018 Constraint 77 488 5.5553 6.9442 13.8883 0.0018 Constraint 19 90 5.5912 6.9890 13.9779 0.0018 Constraint 11 428 5.6397 7.0496 14.0992 0.0018 Constraint 11 374 6.3458 7.9323 15.8646 0.0018 Constraint 3 428 6.3283 7.9104 15.8209 0.0018 Constraint 3 374 3.9105 4.8881 9.7762 0.0018 Constraint 528 538 0.8000 1.0000 2.0000 0.0000 Constraint 518 538 0.8000 1.0000 2.0000 0.0000 Constraint 518 528 0.8000 1.0000 2.0000 0.0000 Constraint 508 538 0.8000 1.0000 2.0000 0.0000 Constraint 508 528 0.8000 1.0000 2.0000 0.0000 Constraint 508 518 0.8000 1.0000 2.0000 0.0000 Constraint 498 538 0.8000 1.0000 2.0000 0.0000 Constraint 498 528 0.8000 1.0000 2.0000 0.0000 Constraint 498 518 0.8000 1.0000 2.0000 0.0000 Constraint 498 508 0.8000 1.0000 2.0000 0.0000 Constraint 488 538 0.8000 1.0000 2.0000 0.0000 Constraint 488 528 0.8000 1.0000 2.0000 0.0000 Constraint 488 518 0.8000 1.0000 2.0000 0.0000 Constraint 488 508 0.8000 1.0000 2.0000 0.0000 Constraint 488 498 0.8000 1.0000 2.0000 0.0000 Constraint 479 538 0.8000 1.0000 2.0000 0.0000 Constraint 479 528 0.8000 1.0000 2.0000 0.0000 Constraint 479 518 0.8000 1.0000 2.0000 0.0000 Constraint 479 508 0.8000 1.0000 2.0000 0.0000 Constraint 479 498 0.8000 1.0000 2.0000 0.0000 Constraint 479 488 0.8000 1.0000 2.0000 0.0000 Constraint 471 538 0.8000 1.0000 2.0000 0.0000 Constraint 471 528 0.8000 1.0000 2.0000 0.0000 Constraint 471 518 0.8000 1.0000 2.0000 0.0000 Constraint 471 508 0.8000 1.0000 2.0000 0.0000 Constraint 471 498 0.8000 1.0000 2.0000 0.0000 Constraint 471 488 0.8000 1.0000 2.0000 0.0000 Constraint 471 479 0.8000 1.0000 2.0000 0.0000 Constraint 462 538 0.8000 1.0000 2.0000 0.0000 Constraint 462 528 0.8000 1.0000 2.0000 0.0000 Constraint 462 518 0.8000 1.0000 2.0000 0.0000 Constraint 462 508 0.8000 1.0000 2.0000 0.0000 Constraint 462 498 0.8000 1.0000 2.0000 0.0000 Constraint 462 488 0.8000 1.0000 2.0000 0.0000 Constraint 462 479 0.8000 1.0000 2.0000 0.0000 Constraint 462 471 0.8000 1.0000 2.0000 0.0000 Constraint 455 528 0.8000 1.0000 2.0000 0.0000 Constraint 455 518 0.8000 1.0000 2.0000 0.0000 Constraint 455 508 0.8000 1.0000 2.0000 0.0000 Constraint 455 498 0.8000 1.0000 2.0000 0.0000 Constraint 455 488 0.8000 1.0000 2.0000 0.0000 Constraint 455 479 0.8000 1.0000 2.0000 0.0000 Constraint 455 471 0.8000 1.0000 2.0000 0.0000 Constraint 455 462 0.8000 1.0000 2.0000 0.0000 Constraint 446 518 0.8000 1.0000 2.0000 0.0000 Constraint 446 508 0.8000 1.0000 2.0000 0.0000 Constraint 446 498 0.8000 1.0000 2.0000 0.0000 Constraint 446 488 0.8000 1.0000 2.0000 0.0000 Constraint 446 479 0.8000 1.0000 2.0000 0.0000 Constraint 446 471 0.8000 1.0000 2.0000 0.0000 Constraint 446 462 0.8000 1.0000 2.0000 0.0000 Constraint 446 455 0.8000 1.0000 2.0000 0.0000 Constraint 437 508 0.8000 1.0000 2.0000 0.0000 Constraint 437 498 0.8000 1.0000 2.0000 0.0000 Constraint 437 488 0.8000 1.0000 2.0000 0.0000 Constraint 437 479 0.8000 1.0000 2.0000 0.0000 Constraint 437 471 0.8000 1.0000 2.0000 0.0000 Constraint 437 462 0.8000 1.0000 2.0000 0.0000 Constraint 437 455 0.8000 1.0000 2.0000 0.0000 Constraint 437 446 0.8000 1.0000 2.0000 0.0000 Constraint 428 498 0.8000 1.0000 2.0000 0.0000 Constraint 428 488 0.8000 1.0000 2.0000 0.0000 Constraint 428 479 0.8000 1.0000 2.0000 0.0000 Constraint 428 471 0.8000 1.0000 2.0000 0.0000 Constraint 428 462 0.8000 1.0000 2.0000 0.0000 Constraint 428 455 0.8000 1.0000 2.0000 0.0000 Constraint 428 446 0.8000 1.0000 2.0000 0.0000 Constraint 428 437 0.8000 1.0000 2.0000 0.0000 Constraint 421 488 0.8000 1.0000 2.0000 0.0000 Constraint 421 479 0.8000 1.0000 2.0000 0.0000 Constraint 421 471 0.8000 1.0000 2.0000 0.0000 Constraint 421 462 0.8000 1.0000 2.0000 0.0000 Constraint 421 455 0.8000 1.0000 2.0000 0.0000 Constraint 421 446 0.8000 1.0000 2.0000 0.0000 Constraint 421 437 0.8000 1.0000 2.0000 0.0000 Constraint 421 428 0.8000 1.0000 2.0000 0.0000 Constraint 416 479 0.8000 1.0000 2.0000 0.0000 Constraint 416 471 0.8000 1.0000 2.0000 0.0000 Constraint 416 462 0.8000 1.0000 2.0000 0.0000 Constraint 416 455 0.8000 1.0000 2.0000 0.0000 Constraint 416 446 0.8000 1.0000 2.0000 0.0000 Constraint 416 437 0.8000 1.0000 2.0000 0.0000 Constraint 416 428 0.8000 1.0000 2.0000 0.0000 Constraint 416 421 0.8000 1.0000 2.0000 0.0000 Constraint 408 471 0.8000 1.0000 2.0000 0.0000 Constraint 408 462 0.8000 1.0000 2.0000 0.0000 Constraint 408 455 0.8000 1.0000 2.0000 0.0000 Constraint 408 446 0.8000 1.0000 2.0000 0.0000 Constraint 408 437 0.8000 1.0000 2.0000 0.0000 Constraint 408 428 0.8000 1.0000 2.0000 0.0000 Constraint 408 421 0.8000 1.0000 2.0000 0.0000 Constraint 408 416 0.8000 1.0000 2.0000 0.0000 Constraint 399 462 0.8000 1.0000 2.0000 0.0000 Constraint 399 455 0.8000 1.0000 2.0000 0.0000 Constraint 399 446 0.8000 1.0000 2.0000 0.0000 Constraint 399 437 0.8000 1.0000 2.0000 0.0000 Constraint 399 428 0.8000 1.0000 2.0000 0.0000 Constraint 399 421 0.8000 1.0000 2.0000 0.0000 Constraint 399 416 0.8000 1.0000 2.0000 0.0000 Constraint 399 408 0.8000 1.0000 2.0000 0.0000 Constraint 388 455 0.8000 1.0000 2.0000 0.0000 Constraint 388 446 0.8000 1.0000 2.0000 0.0000 Constraint 388 437 0.8000 1.0000 2.0000 0.0000 Constraint 388 428 0.8000 1.0000 2.0000 0.0000 Constraint 388 421 0.8000 1.0000 2.0000 0.0000 Constraint 388 416 0.8000 1.0000 2.0000 0.0000 Constraint 388 408 0.8000 1.0000 2.0000 0.0000 Constraint 388 399 0.8000 1.0000 2.0000 0.0000 Constraint 383 446 0.8000 1.0000 2.0000 0.0000 Constraint 383 437 0.8000 1.0000 2.0000 0.0000 Constraint 383 428 0.8000 1.0000 2.0000 0.0000 Constraint 383 421 0.8000 1.0000 2.0000 0.0000 Constraint 383 416 0.8000 1.0000 2.0000 0.0000 Constraint 383 408 0.8000 1.0000 2.0000 0.0000 Constraint 383 399 0.8000 1.0000 2.0000 0.0000 Constraint 383 388 0.8000 1.0000 2.0000 0.0000 Constraint 374 437 0.8000 1.0000 2.0000 0.0000 Constraint 374 428 0.8000 1.0000 2.0000 0.0000 Constraint 374 421 0.8000 1.0000 2.0000 0.0000 Constraint 374 416 0.8000 1.0000 2.0000 0.0000 Constraint 374 408 0.8000 1.0000 2.0000 0.0000 Constraint 374 399 0.8000 1.0000 2.0000 0.0000 Constraint 374 388 0.8000 1.0000 2.0000 0.0000 Constraint 374 383 0.8000 1.0000 2.0000 0.0000 Constraint 368 538 0.8000 1.0000 2.0000 0.0000 Constraint 368 428 0.8000 1.0000 2.0000 0.0000 Constraint 368 421 0.8000 1.0000 2.0000 0.0000 Constraint 368 416 0.8000 1.0000 2.0000 0.0000 Constraint 368 408 0.8000 1.0000 2.0000 0.0000 Constraint 368 399 0.8000 1.0000 2.0000 0.0000 Constraint 368 388 0.8000 1.0000 2.0000 0.0000 Constraint 368 383 0.8000 1.0000 2.0000 0.0000 Constraint 368 374 0.8000 1.0000 2.0000 0.0000 Constraint 359 538 0.8000 1.0000 2.0000 0.0000 Constraint 359 421 0.8000 1.0000 2.0000 0.0000 Constraint 359 416 0.8000 1.0000 2.0000 0.0000 Constraint 359 408 0.8000 1.0000 2.0000 0.0000 Constraint 359 399 0.8000 1.0000 2.0000 0.0000 Constraint 359 388 0.8000 1.0000 2.0000 0.0000 Constraint 359 383 0.8000 1.0000 2.0000 0.0000 Constraint 359 374 0.8000 1.0000 2.0000 0.0000 Constraint 359 368 0.8000 1.0000 2.0000 0.0000 Constraint 351 455 0.8000 1.0000 2.0000 0.0000 Constraint 351 416 0.8000 1.0000 2.0000 0.0000 Constraint 351 408 0.8000 1.0000 2.0000 0.0000 Constraint 351 399 0.8000 1.0000 2.0000 0.0000 Constraint 351 388 0.8000 1.0000 2.0000 0.0000 Constraint 351 383 0.8000 1.0000 2.0000 0.0000 Constraint 351 374 0.8000 1.0000 2.0000 0.0000 Constraint 351 368 0.8000 1.0000 2.0000 0.0000 Constraint 351 359 0.8000 1.0000 2.0000 0.0000 Constraint 343 408 0.8000 1.0000 2.0000 0.0000 Constraint 343 399 0.8000 1.0000 2.0000 0.0000 Constraint 343 388 0.8000 1.0000 2.0000 0.0000 Constraint 343 383 0.8000 1.0000 2.0000 0.0000 Constraint 343 374 0.8000 1.0000 2.0000 0.0000 Constraint 343 368 0.8000 1.0000 2.0000 0.0000 Constraint 343 359 0.8000 1.0000 2.0000 0.0000 Constraint 343 351 0.8000 1.0000 2.0000 0.0000 Constraint 335 538 0.8000 1.0000 2.0000 0.0000 Constraint 335 399 0.8000 1.0000 2.0000 0.0000 Constraint 335 388 0.8000 1.0000 2.0000 0.0000 Constraint 335 383 0.8000 1.0000 2.0000 0.0000 Constraint 335 374 0.8000 1.0000 2.0000 0.0000 Constraint 335 368 0.8000 1.0000 2.0000 0.0000 Constraint 335 359 0.8000 1.0000 2.0000 0.0000 Constraint 335 351 0.8000 1.0000 2.0000 0.0000 Constraint 335 343 0.8000 1.0000 2.0000 0.0000 Constraint 328 538 0.8000 1.0000 2.0000 0.0000 Constraint 328 498 0.8000 1.0000 2.0000 0.0000 Constraint 328 479 0.8000 1.0000 2.0000 0.0000 Constraint 328 388 0.8000 1.0000 2.0000 0.0000 Constraint 328 383 0.8000 1.0000 2.0000 0.0000 Constraint 328 374 0.8000 1.0000 2.0000 0.0000 Constraint 328 368 0.8000 1.0000 2.0000 0.0000 Constraint 328 359 0.8000 1.0000 2.0000 0.0000 Constraint 328 351 0.8000 1.0000 2.0000 0.0000 Constraint 328 343 0.8000 1.0000 2.0000 0.0000 Constraint 328 335 0.8000 1.0000 2.0000 0.0000 Constraint 320 383 0.8000 1.0000 2.0000 0.0000 Constraint 320 374 0.8000 1.0000 2.0000 0.0000 Constraint 320 368 0.8000 1.0000 2.0000 0.0000 Constraint 320 359 0.8000 1.0000 2.0000 0.0000 Constraint 320 351 0.8000 1.0000 2.0000 0.0000 Constraint 320 343 0.8000 1.0000 2.0000 0.0000 Constraint 320 335 0.8000 1.0000 2.0000 0.0000 Constraint 320 328 0.8000 1.0000 2.0000 0.0000 Constraint 308 528 0.8000 1.0000 2.0000 0.0000 Constraint 308 368 0.8000 1.0000 2.0000 0.0000 Constraint 308 359 0.8000 1.0000 2.0000 0.0000 Constraint 308 351 0.8000 1.0000 2.0000 0.0000 Constraint 308 343 0.8000 1.0000 2.0000 0.0000 Constraint 308 335 0.8000 1.0000 2.0000 0.0000 Constraint 308 328 0.8000 1.0000 2.0000 0.0000 Constraint 308 320 0.8000 1.0000 2.0000 0.0000 Constraint 299 538 0.8000 1.0000 2.0000 0.0000 Constraint 299 359 0.8000 1.0000 2.0000 0.0000 Constraint 299 351 0.8000 1.0000 2.0000 0.0000 Constraint 299 343 0.8000 1.0000 2.0000 0.0000 Constraint 299 335 0.8000 1.0000 2.0000 0.0000 Constraint 299 328 0.8000 1.0000 2.0000 0.0000 Constraint 299 320 0.8000 1.0000 2.0000 0.0000 Constraint 299 308 0.8000 1.0000 2.0000 0.0000 Constraint 291 351 0.8000 1.0000 2.0000 0.0000 Constraint 291 343 0.8000 1.0000 2.0000 0.0000 Constraint 291 335 0.8000 1.0000 2.0000 0.0000 Constraint 291 328 0.8000 1.0000 2.0000 0.0000 Constraint 291 320 0.8000 1.0000 2.0000 0.0000 Constraint 291 308 0.8000 1.0000 2.0000 0.0000 Constraint 291 299 0.8000 1.0000 2.0000 0.0000 Constraint 284 343 0.8000 1.0000 2.0000 0.0000 Constraint 284 335 0.8000 1.0000 2.0000 0.0000 Constraint 284 328 0.8000 1.0000 2.0000 0.0000 Constraint 284 320 0.8000 1.0000 2.0000 0.0000 Constraint 284 308 0.8000 1.0000 2.0000 0.0000 Constraint 284 299 0.8000 1.0000 2.0000 0.0000 Constraint 284 291 0.8000 1.0000 2.0000 0.0000 Constraint 273 528 0.8000 1.0000 2.0000 0.0000 Constraint 273 518 0.8000 1.0000 2.0000 0.0000 Constraint 273 335 0.8000 1.0000 2.0000 0.0000 Constraint 273 328 0.8000 1.0000 2.0000 0.0000 Constraint 273 320 0.8000 1.0000 2.0000 0.0000 Constraint 273 308 0.8000 1.0000 2.0000 0.0000 Constraint 273 299 0.8000 1.0000 2.0000 0.0000 Constraint 273 291 0.8000 1.0000 2.0000 0.0000 Constraint 273 284 0.8000 1.0000 2.0000 0.0000 Constraint 268 328 0.8000 1.0000 2.0000 0.0000 Constraint 268 320 0.8000 1.0000 2.0000 0.0000 Constraint 268 308 0.8000 1.0000 2.0000 0.0000 Constraint 268 299 0.8000 1.0000 2.0000 0.0000 Constraint 268 291 0.8000 1.0000 2.0000 0.0000 Constraint 268 284 0.8000 1.0000 2.0000 0.0000 Constraint 268 273 0.8000 1.0000 2.0000 0.0000 Constraint 260 320 0.8000 1.0000 2.0000 0.0000 Constraint 260 308 0.8000 1.0000 2.0000 0.0000 Constraint 260 299 0.8000 1.0000 2.0000 0.0000 Constraint 260 291 0.8000 1.0000 2.0000 0.0000 Constraint 260 284 0.8000 1.0000 2.0000 0.0000 Constraint 260 273 0.8000 1.0000 2.0000 0.0000 Constraint 260 268 0.8000 1.0000 2.0000 0.0000 Constraint 249 308 0.8000 1.0000 2.0000 0.0000 Constraint 249 299 0.8000 1.0000 2.0000 0.0000 Constraint 249 291 0.8000 1.0000 2.0000 0.0000 Constraint 249 284 0.8000 1.0000 2.0000 0.0000 Constraint 249 273 0.8000 1.0000 2.0000 0.0000 Constraint 249 268 0.8000 1.0000 2.0000 0.0000 Constraint 249 260 0.8000 1.0000 2.0000 0.0000 Constraint 241 308 0.8000 1.0000 2.0000 0.0000 Constraint 241 299 0.8000 1.0000 2.0000 0.0000 Constraint 241 291 0.8000 1.0000 2.0000 0.0000 Constraint 241 284 0.8000 1.0000 2.0000 0.0000 Constraint 241 273 0.8000 1.0000 2.0000 0.0000 Constraint 241 268 0.8000 1.0000 2.0000 0.0000 Constraint 241 260 0.8000 1.0000 2.0000 0.0000 Constraint 241 249 0.8000 1.0000 2.0000 0.0000 Constraint 228 471 0.8000 1.0000 2.0000 0.0000 Constraint 228 343 0.8000 1.0000 2.0000 0.0000 Constraint 228 335 0.8000 1.0000 2.0000 0.0000 Constraint 228 308 0.8000 1.0000 2.0000 0.0000 Constraint 228 291 0.8000 1.0000 2.0000 0.0000 Constraint 228 284 0.8000 1.0000 2.0000 0.0000 Constraint 228 273 0.8000 1.0000 2.0000 0.0000 Constraint 228 268 0.8000 1.0000 2.0000 0.0000 Constraint 228 260 0.8000 1.0000 2.0000 0.0000 Constraint 228 249 0.8000 1.0000 2.0000 0.0000 Constraint 228 241 0.8000 1.0000 2.0000 0.0000 Constraint 222 284 0.8000 1.0000 2.0000 0.0000 Constraint 222 273 0.8000 1.0000 2.0000 0.0000 Constraint 222 268 0.8000 1.0000 2.0000 0.0000 Constraint 222 260 0.8000 1.0000 2.0000 0.0000 Constraint 222 249 0.8000 1.0000 2.0000 0.0000 Constraint 222 241 0.8000 1.0000 2.0000 0.0000 Constraint 222 228 0.8000 1.0000 2.0000 0.0000 Constraint 214 462 0.8000 1.0000 2.0000 0.0000 Constraint 214 428 0.8000 1.0000 2.0000 0.0000 Constraint 214 368 0.8000 1.0000 2.0000 0.0000 Constraint 214 308 0.8000 1.0000 2.0000 0.0000 Constraint 214 273 0.8000 1.0000 2.0000 0.0000 Constraint 214 268 0.8000 1.0000 2.0000 0.0000 Constraint 214 260 0.8000 1.0000 2.0000 0.0000 Constraint 214 249 0.8000 1.0000 2.0000 0.0000 Constraint 214 241 0.8000 1.0000 2.0000 0.0000 Constraint 214 228 0.8000 1.0000 2.0000 0.0000 Constraint 214 222 0.8000 1.0000 2.0000 0.0000 Constraint 206 268 0.8000 1.0000 2.0000 0.0000 Constraint 206 260 0.8000 1.0000 2.0000 0.0000 Constraint 206 249 0.8000 1.0000 2.0000 0.0000 Constraint 206 241 0.8000 1.0000 2.0000 0.0000 Constraint 206 228 0.8000 1.0000 2.0000 0.0000 Constraint 206 222 0.8000 1.0000 2.0000 0.0000 Constraint 206 214 0.8000 1.0000 2.0000 0.0000 Constraint 197 260 0.8000 1.0000 2.0000 0.0000 Constraint 197 249 0.8000 1.0000 2.0000 0.0000 Constraint 197 241 0.8000 1.0000 2.0000 0.0000 Constraint 197 228 0.8000 1.0000 2.0000 0.0000 Constraint 197 222 0.8000 1.0000 2.0000 0.0000 Constraint 197 214 0.8000 1.0000 2.0000 0.0000 Constraint 197 206 0.8000 1.0000 2.0000 0.0000 Constraint 189 343 0.8000 1.0000 2.0000 0.0000 Constraint 189 249 0.8000 1.0000 2.0000 0.0000 Constraint 189 241 0.8000 1.0000 2.0000 0.0000 Constraint 189 228 0.8000 1.0000 2.0000 0.0000 Constraint 189 222 0.8000 1.0000 2.0000 0.0000 Constraint 189 214 0.8000 1.0000 2.0000 0.0000 Constraint 189 206 0.8000 1.0000 2.0000 0.0000 Constraint 189 197 0.8000 1.0000 2.0000 0.0000 Constraint 180 538 0.8000 1.0000 2.0000 0.0000 Constraint 180 528 0.8000 1.0000 2.0000 0.0000 Constraint 180 471 0.8000 1.0000 2.0000 0.0000 Constraint 180 299 0.8000 1.0000 2.0000 0.0000 Constraint 180 241 0.8000 1.0000 2.0000 0.0000 Constraint 180 228 0.8000 1.0000 2.0000 0.0000 Constraint 180 222 0.8000 1.0000 2.0000 0.0000 Constraint 180 214 0.8000 1.0000 2.0000 0.0000 Constraint 180 206 0.8000 1.0000 2.0000 0.0000 Constraint 180 197 0.8000 1.0000 2.0000 0.0000 Constraint 180 189 0.8000 1.0000 2.0000 0.0000 Constraint 174 498 0.8000 1.0000 2.0000 0.0000 Constraint 174 488 0.8000 1.0000 2.0000 0.0000 Constraint 174 471 0.8000 1.0000 2.0000 0.0000 Constraint 174 416 0.8000 1.0000 2.0000 0.0000 Constraint 174 359 0.8000 1.0000 2.0000 0.0000 Constraint 174 228 0.8000 1.0000 2.0000 0.0000 Constraint 174 222 0.8000 1.0000 2.0000 0.0000 Constraint 174 214 0.8000 1.0000 2.0000 0.0000 Constraint 174 206 0.8000 1.0000 2.0000 0.0000 Constraint 174 197 0.8000 1.0000 2.0000 0.0000 Constraint 174 189 0.8000 1.0000 2.0000 0.0000 Constraint 174 180 0.8000 1.0000 2.0000 0.0000 Constraint 165 508 0.8000 1.0000 2.0000 0.0000 Constraint 165 488 0.8000 1.0000 2.0000 0.0000 Constraint 165 479 0.8000 1.0000 2.0000 0.0000 Constraint 165 471 0.8000 1.0000 2.0000 0.0000 Constraint 165 428 0.8000 1.0000 2.0000 0.0000 Constraint 165 421 0.8000 1.0000 2.0000 0.0000 Constraint 165 388 0.8000 1.0000 2.0000 0.0000 Constraint 165 383 0.8000 1.0000 2.0000 0.0000 Constraint 165 228 0.8000 1.0000 2.0000 0.0000 Constraint 165 222 0.8000 1.0000 2.0000 0.0000 Constraint 165 214 0.8000 1.0000 2.0000 0.0000 Constraint 165 206 0.8000 1.0000 2.0000 0.0000 Constraint 165 197 0.8000 1.0000 2.0000 0.0000 Constraint 165 189 0.8000 1.0000 2.0000 0.0000 Constraint 165 180 0.8000 1.0000 2.0000 0.0000 Constraint 165 174 0.8000 1.0000 2.0000 0.0000 Constraint 157 538 0.8000 1.0000 2.0000 0.0000 Constraint 157 471 0.8000 1.0000 2.0000 0.0000 Constraint 157 428 0.8000 1.0000 2.0000 0.0000 Constraint 157 343 0.8000 1.0000 2.0000 0.0000 Constraint 157 328 0.8000 1.0000 2.0000 0.0000 Constraint 157 291 0.8000 1.0000 2.0000 0.0000 Constraint 157 222 0.8000 1.0000 2.0000 0.0000 Constraint 157 214 0.8000 1.0000 2.0000 0.0000 Constraint 157 206 0.8000 1.0000 2.0000 0.0000 Constraint 157 197 0.8000 1.0000 2.0000 0.0000 Constraint 157 189 0.8000 1.0000 2.0000 0.0000 Constraint 157 180 0.8000 1.0000 2.0000 0.0000 Constraint 157 174 0.8000 1.0000 2.0000 0.0000 Constraint 157 165 0.8000 1.0000 2.0000 0.0000 Constraint 146 488 0.8000 1.0000 2.0000 0.0000 Constraint 146 479 0.8000 1.0000 2.0000 0.0000 Constraint 146 471 0.8000 1.0000 2.0000 0.0000 Constraint 146 462 0.8000 1.0000 2.0000 0.0000 Constraint 146 455 0.8000 1.0000 2.0000 0.0000 Constraint 146 437 0.8000 1.0000 2.0000 0.0000 Constraint 146 421 0.8000 1.0000 2.0000 0.0000 Constraint 146 399 0.8000 1.0000 2.0000 0.0000 Constraint 146 214 0.8000 1.0000 2.0000 0.0000 Constraint 146 206 0.8000 1.0000 2.0000 0.0000 Constraint 146 197 0.8000 1.0000 2.0000 0.0000 Constraint 146 189 0.8000 1.0000 2.0000 0.0000 Constraint 146 180 0.8000 1.0000 2.0000 0.0000 Constraint 146 174 0.8000 1.0000 2.0000 0.0000 Constraint 146 165 0.8000 1.0000 2.0000 0.0000 Constraint 146 157 0.8000 1.0000 2.0000 0.0000 Constraint 139 488 0.8000 1.0000 2.0000 0.0000 Constraint 139 471 0.8000 1.0000 2.0000 0.0000 Constraint 139 428 0.8000 1.0000 2.0000 0.0000 Constraint 139 421 0.8000 1.0000 2.0000 0.0000 Constraint 139 206 0.8000 1.0000 2.0000 0.0000 Constraint 139 197 0.8000 1.0000 2.0000 0.0000 Constraint 139 189 0.8000 1.0000 2.0000 0.0000 Constraint 139 180 0.8000 1.0000 2.0000 0.0000 Constraint 139 174 0.8000 1.0000 2.0000 0.0000 Constraint 139 165 0.8000 1.0000 2.0000 0.0000 Constraint 139 157 0.8000 1.0000 2.0000 0.0000 Constraint 139 146 0.8000 1.0000 2.0000 0.0000 Constraint 131 528 0.8000 1.0000 2.0000 0.0000 Constraint 131 488 0.8000 1.0000 2.0000 0.0000 Constraint 131 479 0.8000 1.0000 2.0000 0.0000 Constraint 131 462 0.8000 1.0000 2.0000 0.0000 Constraint 131 388 0.8000 1.0000 2.0000 0.0000 Constraint 131 197 0.8000 1.0000 2.0000 0.0000 Constraint 131 189 0.8000 1.0000 2.0000 0.0000 Constraint 131 180 0.8000 1.0000 2.0000 0.0000 Constraint 131 174 0.8000 1.0000 2.0000 0.0000 Constraint 131 165 0.8000 1.0000 2.0000 0.0000 Constraint 131 157 0.8000 1.0000 2.0000 0.0000 Constraint 131 146 0.8000 1.0000 2.0000 0.0000 Constraint 131 139 0.8000 1.0000 2.0000 0.0000 Constraint 124 518 0.8000 1.0000 2.0000 0.0000 Constraint 124 508 0.8000 1.0000 2.0000 0.0000 Constraint 124 498 0.8000 1.0000 2.0000 0.0000 Constraint 124 488 0.8000 1.0000 2.0000 0.0000 Constraint 124 479 0.8000 1.0000 2.0000 0.0000 Constraint 124 462 0.8000 1.0000 2.0000 0.0000 Constraint 124 455 0.8000 1.0000 2.0000 0.0000 Constraint 124 421 0.8000 1.0000 2.0000 0.0000 Constraint 124 408 0.8000 1.0000 2.0000 0.0000 Constraint 124 399 0.8000 1.0000 2.0000 0.0000 Constraint 124 189 0.8000 1.0000 2.0000 0.0000 Constraint 124 180 0.8000 1.0000 2.0000 0.0000 Constraint 124 174 0.8000 1.0000 2.0000 0.0000 Constraint 124 165 0.8000 1.0000 2.0000 0.0000 Constraint 124 157 0.8000 1.0000 2.0000 0.0000 Constraint 124 146 0.8000 1.0000 2.0000 0.0000 Constraint 124 139 0.8000 1.0000 2.0000 0.0000 Constraint 124 131 0.8000 1.0000 2.0000 0.0000 Constraint 111 538 0.8000 1.0000 2.0000 0.0000 Constraint 111 528 0.8000 1.0000 2.0000 0.0000 Constraint 111 508 0.8000 1.0000 2.0000 0.0000 Constraint 111 498 0.8000 1.0000 2.0000 0.0000 Constraint 111 488 0.8000 1.0000 2.0000 0.0000 Constraint 111 479 0.8000 1.0000 2.0000 0.0000 Constraint 111 455 0.8000 1.0000 2.0000 0.0000 Constraint 111 437 0.8000 1.0000 2.0000 0.0000 Constraint 111 399 0.8000 1.0000 2.0000 0.0000 Constraint 111 308 0.8000 1.0000 2.0000 0.0000 Constraint 111 174 0.8000 1.0000 2.0000 0.0000 Constraint 111 165 0.8000 1.0000 2.0000 0.0000 Constraint 111 157 0.8000 1.0000 2.0000 0.0000 Constraint 111 146 0.8000 1.0000 2.0000 0.0000 Constraint 111 139 0.8000 1.0000 2.0000 0.0000 Constraint 111 131 0.8000 1.0000 2.0000 0.0000 Constraint 111 124 0.8000 1.0000 2.0000 0.0000 Constraint 105 538 0.8000 1.0000 2.0000 0.0000 Constraint 105 528 0.8000 1.0000 2.0000 0.0000 Constraint 105 508 0.8000 1.0000 2.0000 0.0000 Constraint 105 498 0.8000 1.0000 2.0000 0.0000 Constraint 105 488 0.8000 1.0000 2.0000 0.0000 Constraint 105 479 0.8000 1.0000 2.0000 0.0000 Constraint 105 165 0.8000 1.0000 2.0000 0.0000 Constraint 105 157 0.8000 1.0000 2.0000 0.0000 Constraint 105 146 0.8000 1.0000 2.0000 0.0000 Constraint 105 139 0.8000 1.0000 2.0000 0.0000 Constraint 105 131 0.8000 1.0000 2.0000 0.0000 Constraint 105 124 0.8000 1.0000 2.0000 0.0000 Constraint 105 111 0.8000 1.0000 2.0000 0.0000 Constraint 97 538 0.8000 1.0000 2.0000 0.0000 Constraint 97 528 0.8000 1.0000 2.0000 0.0000 Constraint 97 157 0.8000 1.0000 2.0000 0.0000 Constraint 97 146 0.8000 1.0000 2.0000 0.0000 Constraint 97 139 0.8000 1.0000 2.0000 0.0000 Constraint 97 131 0.8000 1.0000 2.0000 0.0000 Constraint 97 124 0.8000 1.0000 2.0000 0.0000 Constraint 97 111 0.8000 1.0000 2.0000 0.0000 Constraint 97 105 0.8000 1.0000 2.0000 0.0000 Constraint 90 471 0.8000 1.0000 2.0000 0.0000 Constraint 90 165 0.8000 1.0000 2.0000 0.0000 Constraint 90 146 0.8000 1.0000 2.0000 0.0000 Constraint 90 139 0.8000 1.0000 2.0000 0.0000 Constraint 90 131 0.8000 1.0000 2.0000 0.0000 Constraint 90 124 0.8000 1.0000 2.0000 0.0000 Constraint 90 111 0.8000 1.0000 2.0000 0.0000 Constraint 90 105 0.8000 1.0000 2.0000 0.0000 Constraint 90 97 0.8000 1.0000 2.0000 0.0000 Constraint 84 180 0.8000 1.0000 2.0000 0.0000 Constraint 84 174 0.8000 1.0000 2.0000 0.0000 Constraint 84 165 0.8000 1.0000 2.0000 0.0000 Constraint 84 139 0.8000 1.0000 2.0000 0.0000 Constraint 84 131 0.8000 1.0000 2.0000 0.0000 Constraint 84 124 0.8000 1.0000 2.0000 0.0000 Constraint 84 111 0.8000 1.0000 2.0000 0.0000 Constraint 84 105 0.8000 1.0000 2.0000 0.0000 Constraint 84 97 0.8000 1.0000 2.0000 0.0000 Constraint 84 90 0.8000 1.0000 2.0000 0.0000 Constraint 77 479 0.8000 1.0000 2.0000 0.0000 Constraint 77 462 0.8000 1.0000 2.0000 0.0000 Constraint 77 455 0.8000 1.0000 2.0000 0.0000 Constraint 77 180 0.8000 1.0000 2.0000 0.0000 Constraint 77 174 0.8000 1.0000 2.0000 0.0000 Constraint 77 165 0.8000 1.0000 2.0000 0.0000 Constraint 77 131 0.8000 1.0000 2.0000 0.0000 Constraint 77 124 0.8000 1.0000 2.0000 0.0000 Constraint 77 111 0.8000 1.0000 2.0000 0.0000 Constraint 77 105 0.8000 1.0000 2.0000 0.0000 Constraint 77 97 0.8000 1.0000 2.0000 0.0000 Constraint 77 90 0.8000 1.0000 2.0000 0.0000 Constraint 77 84 0.8000 1.0000 2.0000 0.0000 Constraint 69 488 0.8000 1.0000 2.0000 0.0000 Constraint 69 374 0.8000 1.0000 2.0000 0.0000 Constraint 69 124 0.8000 1.0000 2.0000 0.0000 Constraint 69 111 0.8000 1.0000 2.0000 0.0000 Constraint 69 105 0.8000 1.0000 2.0000 0.0000 Constraint 69 97 0.8000 1.0000 2.0000 0.0000 Constraint 69 90 0.8000 1.0000 2.0000 0.0000 Constraint 69 84 0.8000 1.0000 2.0000 0.0000 Constraint 69 77 0.8000 1.0000 2.0000 0.0000 Constraint 61 351 0.8000 1.0000 2.0000 0.0000 Constraint 61 180 0.8000 1.0000 2.0000 0.0000 Constraint 61 111 0.8000 1.0000 2.0000 0.0000 Constraint 61 105 0.8000 1.0000 2.0000 0.0000 Constraint 61 97 0.8000 1.0000 2.0000 0.0000 Constraint 61 90 0.8000 1.0000 2.0000 0.0000 Constraint 61 84 0.8000 1.0000 2.0000 0.0000 Constraint 61 77 0.8000 1.0000 2.0000 0.0000 Constraint 61 69 0.8000 1.0000 2.0000 0.0000 Constraint 52 421 0.8000 1.0000 2.0000 0.0000 Constraint 52 359 0.8000 1.0000 2.0000 0.0000 Constraint 52 351 0.8000 1.0000 2.0000 0.0000 Constraint 52 111 0.8000 1.0000 2.0000 0.0000 Constraint 52 105 0.8000 1.0000 2.0000 0.0000 Constraint 52 97 0.8000 1.0000 2.0000 0.0000 Constraint 52 90 0.8000 1.0000 2.0000 0.0000 Constraint 52 84 0.8000 1.0000 2.0000 0.0000 Constraint 52 77 0.8000 1.0000 2.0000 0.0000 Constraint 52 69 0.8000 1.0000 2.0000 0.0000 Constraint 52 61 0.8000 1.0000 2.0000 0.0000 Constraint 44 538 0.8000 1.0000 2.0000 0.0000 Constraint 44 528 0.8000 1.0000 2.0000 0.0000 Constraint 44 471 0.8000 1.0000 2.0000 0.0000 Constraint 44 462 0.8000 1.0000 2.0000 0.0000 Constraint 44 374 0.8000 1.0000 2.0000 0.0000 Constraint 44 268 0.8000 1.0000 2.0000 0.0000 Constraint 44 241 0.8000 1.0000 2.0000 0.0000 Constraint 44 105 0.8000 1.0000 2.0000 0.0000 Constraint 44 97 0.8000 1.0000 2.0000 0.0000 Constraint 44 90 0.8000 1.0000 2.0000 0.0000 Constraint 44 84 0.8000 1.0000 2.0000 0.0000 Constraint 44 77 0.8000 1.0000 2.0000 0.0000 Constraint 44 69 0.8000 1.0000 2.0000 0.0000 Constraint 44 61 0.8000 1.0000 2.0000 0.0000 Constraint 44 52 0.8000 1.0000 2.0000 0.0000 Constraint 33 538 0.8000 1.0000 2.0000 0.0000 Constraint 33 518 0.8000 1.0000 2.0000 0.0000 Constraint 33 488 0.8000 1.0000 2.0000 0.0000 Constraint 33 273 0.8000 1.0000 2.0000 0.0000 Constraint 33 174 0.8000 1.0000 2.0000 0.0000 Constraint 33 165 0.8000 1.0000 2.0000 0.0000 Constraint 33 124 0.8000 1.0000 2.0000 0.0000 Constraint 33 97 0.8000 1.0000 2.0000 0.0000 Constraint 33 90 0.8000 1.0000 2.0000 0.0000 Constraint 33 84 0.8000 1.0000 2.0000 0.0000 Constraint 33 77 0.8000 1.0000 2.0000 0.0000 Constraint 33 69 0.8000 1.0000 2.0000 0.0000 Constraint 33 61 0.8000 1.0000 2.0000 0.0000 Constraint 33 52 0.8000 1.0000 2.0000 0.0000 Constraint 33 44 0.8000 1.0000 2.0000 0.0000 Constraint 24 479 0.8000 1.0000 2.0000 0.0000 Constraint 24 399 0.8000 1.0000 2.0000 0.0000 Constraint 24 374 0.8000 1.0000 2.0000 0.0000 Constraint 24 368 0.8000 1.0000 2.0000 0.0000 Constraint 24 197 0.8000 1.0000 2.0000 0.0000 Constraint 24 157 0.8000 1.0000 2.0000 0.0000 Constraint 24 97 0.8000 1.0000 2.0000 0.0000 Constraint 24 90 0.8000 1.0000 2.0000 0.0000 Constraint 24 84 0.8000 1.0000 2.0000 0.0000 Constraint 24 77 0.8000 1.0000 2.0000 0.0000 Constraint 24 69 0.8000 1.0000 2.0000 0.0000 Constraint 24 61 0.8000 1.0000 2.0000 0.0000 Constraint 24 52 0.8000 1.0000 2.0000 0.0000 Constraint 24 44 0.8000 1.0000 2.0000 0.0000 Constraint 24 33 0.8000 1.0000 2.0000 0.0000 Constraint 19 488 0.8000 1.0000 2.0000 0.0000 Constraint 19 416 0.8000 1.0000 2.0000 0.0000 Constraint 19 374 0.8000 1.0000 2.0000 0.0000 Constraint 19 368 0.8000 1.0000 2.0000 0.0000 Constraint 19 359 0.8000 1.0000 2.0000 0.0000 Constraint 19 351 0.8000 1.0000 2.0000 0.0000 Constraint 19 174 0.8000 1.0000 2.0000 0.0000 Constraint 19 97 0.8000 1.0000 2.0000 0.0000 Constraint 19 84 0.8000 1.0000 2.0000 0.0000 Constraint 19 77 0.8000 1.0000 2.0000 0.0000 Constraint 19 69 0.8000 1.0000 2.0000 0.0000 Constraint 19 61 0.8000 1.0000 2.0000 0.0000 Constraint 19 52 0.8000 1.0000 2.0000 0.0000 Constraint 19 44 0.8000 1.0000 2.0000 0.0000 Constraint 19 33 0.8000 1.0000 2.0000 0.0000 Constraint 19 24 0.8000 1.0000 2.0000 0.0000 Constraint 11 416 0.8000 1.0000 2.0000 0.0000 Constraint 11 368 0.8000 1.0000 2.0000 0.0000 Constraint 11 320 0.8000 1.0000 2.0000 0.0000 Constraint 11 174 0.8000 1.0000 2.0000 0.0000 Constraint 11 97 0.8000 1.0000 2.0000 0.0000 Constraint 11 77 0.8000 1.0000 2.0000 0.0000 Constraint 11 69 0.8000 1.0000 2.0000 0.0000 Constraint 11 61 0.8000 1.0000 2.0000 0.0000 Constraint 11 52 0.8000 1.0000 2.0000 0.0000 Constraint 11 44 0.8000 1.0000 2.0000 0.0000 Constraint 11 33 0.8000 1.0000 2.0000 0.0000 Constraint 11 24 0.8000 1.0000 2.0000 0.0000 Constraint 11 19 0.8000 1.0000 2.0000 0.0000 Constraint 3 462 0.8000 1.0000 2.0000 0.0000 Constraint 3 111 0.8000 1.0000 2.0000 0.0000 Constraint 3 69 0.8000 1.0000 2.0000 0.0000 Constraint 3 61 0.8000 1.0000 2.0000 0.0000 Constraint 3 52 0.8000 1.0000 2.0000 0.0000 Constraint 3 44 0.8000 1.0000 2.0000 0.0000 Constraint 3 33 0.8000 1.0000 2.0000 0.0000 Constraint 3 24 0.8000 1.0000 2.0000 0.0000 Constraint 3 19 0.8000 1.0000 2.0000 0.0000 Constraint 3 11 0.8000 1.0000 2.0000 0.0000 Done printing distance constraints # command: