InFilePrefix /projects/compbio/experiments/undertaker/atoms-inputs/ ReadTrainingAtoms dunbrack-2191.atoms ReadRotamerLibrary dunbrack-2191.rot InFilePrefix /projects/compbio/experiments/undertaker/spots/ ReadAtomType exp-pdb.types ReadClashTable exp-pdb-2191-2symm.clash SetClashDefinition exp-pdb-2191-2symm InFilePrefix /projects/compbio/experiments/protein-predict/casp7/T0346/ ReadTargetSeq T0346.a2m 1 InFilePrefix /projects/compbio/experiments/protein-predict/casp7/T0346/ Include T0346.t04.undertaker-align.under Include T0346.t06.undertaker-align.under Include T0346.t2k.undertaker-align.under Include T0346.undertaker-align.under Include /projects/compbio/experiments/protein-predict/casp7/constraints/T0346/manyalignments.under PrintAlignmentsContacts quit