# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/
# command:# reading dunbrack-2191.atoms
#
#computed average backbone with maximum peptide_sq_deviance = 0.002
# computed average trans backbone unit from 53157 examples
# computed average trans backbone unit before proline from 2010 examples
# computed average cis backbone unit from 97 examples
# trans (non-proline) backbone unit:
#	  CA= -2.2087 1.0126 -0.0030
#	   O= -0.1499 2.2440 0.0016
#	   C= -0.6889 1.1368 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4581 -0.0000 0.0000
# cis backbone unit:
#	  CA= -0.1436 2.4534 -0.0002
#	   O= -2.0284 0.9742 0.0015
#	   C= -0.8018 1.0771 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4668 0.0000 0.0000
# trans backbone unit before proline:
#	  CA= -2.2100 1.0631 -0.0014
#	   O= -0.1236 2.2458 0.0075
#	   C= -0.6872 1.1517 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4660 0.0000 0.0000


# After reading dunbrack-2191.atoms have 2191 chains in training database
#  Count of chains,residues,atoms: 2191,500310,3902258
#  493341 residues have no bad marker
#  3226 residues lack atoms needed to compute omega
#  1453 residues have cis peptide
#  number of each bad type:
#	NON_STANDARD_RESIDUE	4
#	HAS_OXT	1167
#	TOO_MANY_ATOMS	1
#	TOO_FEW_ATOMS	3052
#	HAS_UNKNOWN_ATOMS	9
#	HAS_DUPLICATE_ATOMS	0
#	CHAIN_BREAK_BEFORE	979
#	NON_PLANAR_PEPTIDE	888
#	BAD_PEPTIDE	2680
#  Note: may sum to more than number of residues, 
#    because one residue may have multiple problems
# command:# Reading rotamer library from dunbrack-2191.rot
# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/
# command:# ReadAtomType exp-pdb.types
Read AtomType exp-pdb with 49 types.
# command:# ReadClashTable exp-pdb-2191-2symm.clash
# Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2
# command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0367/
# command:# Making conformation for sequence T0367 numbered 1 through 125
Created new target T0367 from T0367.a2m
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0367/
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/constraints_v3/T0367/
# command:# reading script from file servers-clean.under
# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0367/decoys/
# ReadConformPDB reading from PDB file tr367.gromacs0.pdb.gz looking for model 1
# choosing archetypes in rotamer library
# Found a chain break before 72
# copying to AlignedFragments data structure
# ReadConformPDB reading from PDB file tr367.gromacs0.repack-nonPC.pdb.gz looking for model 1
# Found a chain break before 72
# copying to AlignedFragments data structure
# ReadConformPDB reading from PDB file tr367.pdb.gz looking for model 1
# Found a chain break before 58
# copying to AlignedFragments data structure
# ReadConformPDB reading from PDB file tr367.repack-nonPC.pdb.gz looking for model 1
# Found a chain break before 58
# copying to AlignedFragments data structure
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS2.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS3.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS4.pdb.gz looking for model 1
# Found a chain break before 115
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS5.pdb.gz looking for model 1
# Found a chain break before 53
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS2.pdb.gz looking for model 1
# Found a chain break before 113
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_RECOM_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS5
# ReadConformPDB reading from PDB file servers/3Dpro_TS1.pdb.gz looking for model 1
# Found a chain break before 59
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS1
# ReadConformPDB reading from PDB file servers/3Dpro_TS2.pdb.gz looking for model 1
# Found a chain break before 58
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS2
# ReadConformPDB reading from PDB file servers/3Dpro_TS3.pdb.gz looking for model 1
# Found a chain break before 85
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS3
# ReadConformPDB reading from PDB file servers/3Dpro_TS4.pdb.gz looking for model 1
# Found a chain break before 58
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS4
# ReadConformPDB reading from PDB file servers/3Dpro_TS5.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS5
# ReadConformPDB reading from PDB file servers/ABIpro_TS1.pdb.gz looking for model 1
# Found a chain break before 27
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS1
# ReadConformPDB reading from PDB file servers/ABIpro_TS2.pdb.gz looking for model 1
# Found a chain break before 99
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS2
# ReadConformPDB reading from PDB file servers/ABIpro_TS3.pdb.gz looking for model 1
# Found a chain break before 89
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS3
# ReadConformPDB reading from PDB file servers/ABIpro_TS4.pdb.gz looking for model 1
# Found a chain break before 102
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS4
# ReadConformPDB reading from PDB file servers/ABIpro_TS5.pdb.gz looking for model 1
# Found a chain break before 123
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS5
# ReadConformPDB reading from PDB file servers/BayesHH_TS1.pdb.gz looking for model 1
# Found a chain break before 83
# copying to AlignedFragments data structure
# naming current conformation BayesHH_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS1.pdb.gz looking for model 1
# naming current conformation Bilab-ENABLE_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS2.pdb.gz looking for model 1
# Found a chain break before 89
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS2
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS3.pdb.gz looking for model 1
# Found a chain break before 89
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS3
# ReadConformPDB reading from PDB file servers/CIRCLE_TS1.pdb.gz looking for model 1
# Found a chain break before 119
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS1
# ReadConformPDB reading from PDB file servers/CIRCLE_TS2.pdb.gz looking for model 1
# Found a chain break before 95
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS2
# ReadConformPDB reading from PDB file servers/CIRCLE_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS3
# ReadConformPDB reading from PDB file servers/CIRCLE_TS4.pdb.gz looking for model 1
# Found a chain break before 58
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS4
# ReadConformPDB reading from PDB file servers/CIRCLE_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS5
# ReadConformPDB reading from PDB file servers/CPHmodels_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation CPHmodels_TS1
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS1
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS2
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS3
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS4
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation CaspIta-FOX_TS5
# ReadConformPDB reading from PDB file servers/Distill_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Distill_TS1
# ReadConformPDB reading from PDB file servers/Distill_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Distill_TS2
# ReadConformPDB reading from PDB file servers/Distill_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Distill_TS3
# ReadConformPDB reading from PDB file servers/Distill_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Distill_TS4
# ReadConformPDB reading from PDB file servers/Distill_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Distill_TS5
# ReadConformPDB reading from PDB file servers/FAMSD_TS1.pdb.gz looking for model 1
# Found a chain break before 93
# copying to AlignedFragments data structure
# naming current conformation FAMSD_TS1
# ReadConformPDB reading from PDB file servers/FAMSD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS2
# ReadConformPDB reading from PDB file servers/FAMSD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS3
# ReadConformPDB reading from PDB file servers/FAMSD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS4
# ReadConformPDB reading from PDB file servers/FAMSD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS5
# ReadConformPDB reading from PDB file servers/FAMS_TS1.pdb.gz looking for model 1
# Found a chain break before 121
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS1
# ReadConformPDB reading from PDB file servers/FAMS_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FAMS_TS2
# ReadConformPDB reading from PDB file servers/FAMS_TS3.pdb.gz looking for model 1
# Found a chain break before 95
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS3
# ReadConformPDB reading from PDB file servers/FAMS_TS4.pdb.gz looking for model 1
# Found a chain break before 58
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS4
# ReadConformPDB reading from PDB file servers/FAMS_TS5.pdb.gz looking for model 1
# Found a chain break before 113
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS5
# ReadConformPDB reading from PDB file servers/FOLDpro_TS1.pdb.gz looking for model 1
# Found a chain break before 59
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS1
# ReadConformPDB reading from PDB file servers/FOLDpro_TS2.pdb.gz looking for model 1
# naming current conformation FOLDpro_TS2
# ReadConformPDB reading from PDB file servers/FOLDpro_TS3.pdb.gz looking for model 1
# naming current conformation FOLDpro_TS3
# ReadConformPDB reading from PDB file servers/FOLDpro_TS4.pdb.gz looking for model 1
# Found a chain break before 85
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS4
# ReadConformPDB reading from PDB file servers/FOLDpro_TS5.pdb.gz looking for model 1
# naming current conformation FOLDpro_TS5
# ReadConformPDB reading from PDB file servers/FORTE1_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL1
# ReadConformPDB reading from PDB file servers/FORTE1_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL2
# ReadConformPDB reading from PDB file servers/FORTE1_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL3
# ReadConformPDB reading from PDB file servers/FORTE1_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL4
# ReadConformPDB reading from PDB file servers/FORTE1_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL5
# ReadConformPDB reading from PDB file servers/FORTE2_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL1
# ReadConformPDB reading from PDB file servers/FORTE2_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL2
# ReadConformPDB reading from PDB file servers/FORTE2_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL3
# ReadConformPDB reading from PDB file servers/FORTE2_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL4
# ReadConformPDB reading from PDB file servers/FORTE2_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL5
# ReadConformPDB reading from PDB file servers/FUGMOD_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS1
# ReadConformPDB reading from PDB file servers/FUGMOD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FUGMOD_TS2
# ReadConformPDB reading from PDB file servers/FUGMOD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS3
# ReadConformPDB reading from PDB file servers/FUGMOD_TS4.pdb.gz looking for model 1
# Found a chain break before 16
# copying to AlignedFragments data structure
# naming current conformation FUGMOD_TS4
# ReadConformPDB reading from PDB file servers/FUGMOD_TS5.pdb.gz looking for model 1
# Found a chain break before 98
# copying to AlignedFragments data structure
# naming current conformation FUGMOD_TS5
# ReadConformPDB reading from PDB file servers/FUGUE_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL1
# ReadConformPDB reading from PDB file servers/FUGUE_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FUGUE_AL2
# ReadConformPDB reading from PDB file servers/FUGUE_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL3
# ReadConformPDB reading from PDB file servers/FUGUE_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FUGUE_AL4
# ReadConformPDB reading from PDB file servers/FUGUE_AL5.pdb.gz looking for model 1
Skipped atom 25, because occupancy 1 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 26, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 27, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 28, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 81, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 178, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 179, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 180, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 181, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 190, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 207, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 208, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 209, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 210, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 351, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 420, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 453, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL5
# ReadConformPDB reading from PDB file servers/FUNCTION_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FUNCTION_TS1
# ReadConformPDB reading from PDB file servers/FUNCTION_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FUNCTION_TS2
# ReadConformPDB reading from PDB file servers/FUNCTION_TS3.pdb.gz looking for model 1
# Found a chain break before 113
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS3
# ReadConformPDB reading from PDB file servers/FUNCTION_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation FUNCTION_TS4
# ReadConformPDB reading from PDB file servers/FUNCTION_TS5.pdb.gz looking for model 1
# Found a chain break before 119
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS5
# ReadConformPDB reading from PDB file servers/Frankenstein_TS1.pdb.gz looking for model 1
# Found a chain break before 57
# copying to AlignedFragments data structure
# naming current conformation Frankenstein_TS1
# ReadConformPDB reading from PDB file servers/Frankenstein_TS2.pdb.gz looking for model 1
# Found a chain break before 88
# copying to AlignedFragments data structure
# naming current conformation Frankenstein_TS2
# ReadConformPDB reading from PDB file servers/Frankenstein_TS3.pdb.gz looking for model 1
# naming current conformation Frankenstein_TS3
# ReadConformPDB reading from PDB file servers/Frankenstein_TS4.pdb.gz looking for model 1
# Found a chain break before 83
# copying to AlignedFragments data structure
# naming current conformation Frankenstein_TS4
# ReadConformPDB reading from PDB file servers/Frankenstein_TS5.pdb.gz looking for model 1
# Found a chain break before 92
# copying to AlignedFragments data structure
# naming current conformation Frankenstein_TS5
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS1.pdb.gz looking for model 1
# Found a chain break before 90
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS1
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation GeneSilicoMetaServer_TS2
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS3.pdb.gz looking for model 1
# naming current conformation GeneSilicoMetaServer_TS3
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation GeneSilicoMetaServer_TS4
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation GeneSilicoMetaServer_TS5
# ReadConformPDB reading from PDB file servers/HHpred1_TS1.pdb.gz looking for model 1
# Found a chain break before 74
# copying to AlignedFragments data structure
# naming current conformation HHpred1_TS1
# ReadConformPDB reading from PDB file servers/HHpred2_TS1.pdb.gz looking for model 1
# naming current conformation HHpred2_TS1
# ReadConformPDB reading from PDB file servers/HHpred3_TS1.pdb.gz looking for model 1
# naming current conformation HHpred3_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS2
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS3
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS4
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS5
# ReadConformPDB reading from PDB file servers/LOOPP_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS1
# ReadConformPDB reading from PDB file servers/LOOPP_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS2
# ReadConformPDB reading from PDB file servers/LOOPP_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS3
# ReadConformPDB reading from PDB file servers/LOOPP_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS4
# ReadConformPDB reading from PDB file servers/LOOPP_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS5
# ReadConformPDB reading from PDB file servers/MIG_FROST_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation MIG_FROST_AL1
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS1.pdb.gz looking for model 1
# Found a chain break before 88
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server2_TS1
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS2.pdb.gz looking for model 1
# Found a chain break before 87
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server2_TS2
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS3.pdb.gz looking for model 1
# Found a chain break before 88
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server2_TS3
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS4.pdb.gz looking for model 1
# Found a chain break before 69
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server2_TS4
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS5.pdb.gz looking for model 1
# naming current conformation Ma-OPUS-server2_TS5
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS1.pdb.gz looking for model 1
# Found a chain break before 88
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS1
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS2.pdb.gz looking for model 1
# naming current conformation Ma-OPUS-server_TS2
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS3.pdb.gz looking for model 1
# Found a chain break before 88
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS3
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS4.pdb.gz looking for model 1
# Found a chain break before 69
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS4
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS5.pdb.gz looking for model 1
# Found a chain break before 35
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS5
# ReadConformPDB reading from PDB file servers/MetaTasser_TS1.pdb.gz looking for model 1
# Found a chain break before 124
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS1
# ReadConformPDB reading from PDB file servers/MetaTasser_TS2.pdb.gz looking for model 1
# Found a chain break before 96
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS2
# ReadConformPDB reading from PDB file servers/MetaTasser_TS3.pdb.gz looking for model 1
# Found a chain break before 124
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS3
# ReadConformPDB reading from PDB file servers/NN_PUT_lab_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation NN_PUT_lab_TS1
# ReadConformPDB reading from PDB file servers/POMYSL_TS1.pdb.gz looking for model 1
# Found a chain break before 120
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS1
# ReadConformPDB reading from PDB file servers/POMYSL_TS2.pdb.gz looking for model 1
# Found a chain break before 113
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS2
# ReadConformPDB reading from PDB file servers/POMYSL_TS3.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS3
# ReadConformPDB reading from PDB file servers/POMYSL_TS4.pdb.gz looking for model 1
# Found a chain break before 96
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS4
# ReadConformPDB reading from PDB file servers/POMYSL_TS5.pdb.gz looking for model 1
# Found a chain break before 120
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS5
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS1.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS2.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS3.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS4.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS5.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS5
# ReadConformPDB reading from PDB file servers/PROTINFO_TS1.pdb.gz looking for model 1
# Found a chain break before 67
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO_TS2.pdb.gz looking for model 1
# Found a chain break before 88
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO_TS3.pdb.gz looking for model 1
# Found a chain break before 60
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO_TS4.pdb.gz looking for model 1
# Found a chain break before 30
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO_TS5.pdb.gz looking for model 1
# Found a chain break before 30
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS5
# ReadConformPDB reading from PDB file servers/Pcons6_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS1
# ReadConformPDB reading from PDB file servers/Pcons6_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS2
# ReadConformPDB reading from PDB file servers/Pcons6_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS3
# ReadConformPDB reading from PDB file servers/Pcons6_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS4
# ReadConformPDB reading from PDB file servers/Pcons6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS5
# ReadConformPDB reading from PDB file servers/Phyre-1_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Phyre-1_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS1.pdb.gz looking for model 1
# Found a chain break before 121
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS2.pdb.gz looking for model 1
# Found a chain break before 93
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS2
# ReadConformPDB reading from PDB file servers/Phyre-2_TS3.pdb.gz looking for model 1
# Found a chain break before 122
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS3
# ReadConformPDB reading from PDB file servers/Phyre-2_TS4.pdb.gz looking for model 1
# Found a chain break before 121
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS4
# ReadConformPDB reading from PDB file servers/Phyre-2_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS5
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS1.pdb.gz looking for model 1
# Found a chain break before 85
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS1
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS2.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS2
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS3.pdb.gz looking for model 1
# Found a chain break before 89
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS3
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS4.pdb.gz looking for model 1
# Found a chain break before 85
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS4
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS1.pdb.gz looking for model 1
# naming current conformation RAPTOR-ACE_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS2.pdb.gz looking for model 1
# Found a chain break before 92
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS3.pdb.gz looking for model 1
# Found a chain break before 58
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS4.pdb.gz looking for model 1
# naming current conformation RAPTOR-ACE_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS5.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS5
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS1.pdb.gz looking for model 1
# Found a chain break before 123
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS1
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS2.pdb.gz looking for model 1
# Found a chain break before 123
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS2
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS3.pdb.gz looking for model 1
# Found a chain break before 123
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS3
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS4.pdb.gz looking for model 1
# Found a chain break before 123
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS4
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS5.pdb.gz looking for model 1
# Found a chain break before 123
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR_TS1.pdb.gz looking for model 1
# Found a chain break before 96
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR_TS2.pdb.gz looking for model 1
# naming current conformation RAPTOR_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR_TS3.pdb.gz looking for model 1
# naming current conformation RAPTOR_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR_TS4.pdb.gz looking for model 1
# naming current conformation RAPTOR_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR_TS5.pdb.gz looking for model 1
# naming current conformation RAPTOR_TS5
# ReadConformPDB reading from PDB file servers/ROBETTA_TS1.pdb.gz looking for model 1
# Found a chain break before 85
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS1
# ReadConformPDB reading from PDB file servers/ROBETTA_TS2.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS2
# ReadConformPDB reading from PDB file servers/ROBETTA_TS3.pdb.gz looking for model 1
# Found a chain break before 89
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS3
# ReadConformPDB reading from PDB file servers/ROBETTA_TS4.pdb.gz looking for model 1
# Found a chain break before 89
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS4
# ReadConformPDB reading from PDB file servers/ROBETTA_TS5.pdb.gz looking for model 1
# Found a chain break before 85
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS5
# ReadConformPDB reading from PDB file servers/ROKKY_TS1.pdb.gz looking for model 1
# Found a chain break before 89
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS1
# ReadConformPDB reading from PDB file servers/ROKKY_TS2.pdb.gz looking for model 1
# naming current conformation ROKKY_TS2
# ReadConformPDB reading from PDB file servers/ROKKY_TS3.pdb.gz looking for model 1
# naming current conformation ROKKY_TS3
# ReadConformPDB reading from PDB file servers/SAM-T02_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL1
# ReadConformPDB reading from PDB file servers/SAM-T02_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL2
# ReadConformPDB reading from PDB file servers/SAM-T02_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL3
# ReadConformPDB reading from PDB file servers/SAM-T02_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL4
# ReadConformPDB reading from PDB file servers/SAM-T02_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL5
# ReadConformPDB reading from PDB file servers/SAM-T99_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL1
# ReadConformPDB reading from PDB file servers/SAM-T99_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL2
# ReadConformPDB reading from PDB file servers/SAM-T99_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL3
# ReadConformPDB reading from PDB file servers/SAM-T99_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL4
# ReadConformPDB reading from PDB file servers/SAM-T99_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL5
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS1.pdb.gz looking for model 1
# Found a chain break before 109
# copying to AlignedFragments data structure
# naming current conformation SAM_T06_server_TS1
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS2
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS3
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS4
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS5
# ReadConformPDB reading from PDB file servers/SP3_TS1.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation SP3_TS1
# ReadConformPDB reading from PDB file servers/SP3_TS2.pdb.gz looking for model 1
# Found a chain break before 58
# copying to AlignedFragments data structure
# naming current conformation SP3_TS2
# ReadConformPDB reading from PDB file servers/SP3_TS3.pdb.gz looking for model 1
# naming current conformation SP3_TS3
# ReadConformPDB reading from PDB file servers/SP3_TS4.pdb.gz looking for model 1
# Found a chain break before 81
# copying to AlignedFragments data structure
# naming current conformation SP3_TS4
# ReadConformPDB reading from PDB file servers/SP3_TS5.pdb.gz looking for model 1
# Found a chain break before 82
# copying to AlignedFragments data structure
# naming current conformation SP3_TS5
# ReadConformPDB reading from PDB file servers/SP4_TS1.pdb.gz looking for model 1
# Found a chain break before 91
# copying to AlignedFragments data structure
# naming current conformation SP4_TS1
# ReadConformPDB reading from PDB file servers/SP4_TS2.pdb.gz looking for model 1
# naming current conformation SP4_TS2
# ReadConformPDB reading from PDB file servers/SP4_TS3.pdb.gz looking for model 1
# naming current conformation SP4_TS3
# ReadConformPDB reading from PDB file servers/SP4_TS4.pdb.gz looking for model 1
# Found a chain break before 59
# copying to AlignedFragments data structure
# naming current conformation SP4_TS4
# ReadConformPDB reading from PDB file servers/SP4_TS5.pdb.gz looking for model 1
# naming current conformation SP4_TS5
# ReadConformPDB reading from PDB file servers/SPARKS2_TS1.pdb.gz looking for model 1
# naming current conformation SPARKS2_TS1
# ReadConformPDB reading from PDB file servers/SPARKS2_TS2.pdb.gz looking for model 1
# Found a chain break before 95
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS2
# ReadConformPDB reading from PDB file servers/SPARKS2_TS3.pdb.gz looking for model 1
# Found a chain break before 60
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS3
# ReadConformPDB reading from PDB file servers/SPARKS2_TS4.pdb.gz looking for model 1
# Found a chain break before 92
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS4
# ReadConformPDB reading from PDB file servers/SPARKS2_TS5.pdb.gz looking for model 1
# naming current conformation SPARKS2_TS5
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS2
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS3
# ReadConformPDB reading from PDB file servers/UNI-EID_expm_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation UNI-EID_expm_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL2
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL3
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS1.pdb.gz looking for model 1
# Found a chain break before 96
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS1
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS2.pdb.gz looking for model 1
# Found a chain break before 91
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS2
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS3.pdb.gz looking for model 1
# Found a chain break before 68
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS3
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS4.pdb.gz looking for model 1
# Found a chain break before 88
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS4
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS5.pdb.gz looking for model 1
# Found a chain break before 86
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS5
# ReadConformPDB reading from PDB file servers/beautshot_TS1.pdb.gz looking for model 1
# Found a chain break before 121
# copying to AlignedFragments data structure
# naming current conformation beautshot_TS1
# ReadConformPDB reading from PDB file servers/beautshotbase_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation beautshotbase_TS1
# ReadConformPDB reading from PDB file servers/forecast-s_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL1
# ReadConformPDB reading from PDB file servers/forecast-s_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL2
# ReadConformPDB reading from PDB file servers/forecast-s_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL3
# ReadConformPDB reading from PDB file servers/forecast-s_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL4
# ReadConformPDB reading from PDB file servers/forecast-s_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL5
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS1.pdb.gz looking for model 1
# Found a chain break before 42
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS2.pdb.gz looking for model 1
# Found a chain break before 79
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS3.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS4.pdb.gz looking for model 1
# Found a chain break before 59
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS5.pdb.gz looking for model 1
# Found a chain break before 35
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS5
# ReadConformPDB reading from PDB file servers/karypis.srv_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS5
# ReadConformPDB reading from PDB file servers/keasar-server_TS1.pdb.gz looking for model 1
# naming current conformation keasar-server_TS1
# ReadConformPDB reading from PDB file servers/keasar-server_TS2.pdb.gz looking for model 1
# naming current conformation keasar-server_TS2
# ReadConformPDB reading from PDB file servers/keasar-server_TS3.pdb.gz looking for model 1
# naming current conformation keasar-server_TS3
# ReadConformPDB reading from PDB file servers/keasar-server_TS4.pdb.gz looking for model 1
# naming current conformation keasar-server_TS4
# ReadConformPDB reading from PDB file servers/keasar-server_TS5.pdb.gz looking for model 1
# naming current conformation keasar-server_TS5
# ReadConformPDB reading from PDB file servers/mGen-3D_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation mGen-3D_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation nFOLD_TS2
# ReadConformPDB reading from PDB file servers/nFOLD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation nFOLD_TS3
# ReadConformPDB reading from PDB file servers/nFOLD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS4
# ReadConformPDB reading from PDB file servers/nFOLD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS5
# ReadConformPDB reading from PDB file servers/panther2_TS1.pdb.gz looking for model 1
WARNING: atoms too close: (T0367)M24.N and (T0367)G25.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)G25.CA only 0.000 apart, marking (T0367)G25.CA as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)G25.O only 0.000 apart, marking (T0367)G25.O as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)G25.C only 0.000 apart, marking (T0367)G25.C as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)L26.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)L26.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)L26.CA only 0.000 apart, marking (T0367)L26.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)L26.CA only 0.000 apart, marking (T0367)L26.CA as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)L26.CB only 0.000 apart, marking (T0367)L26.CB as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)L26.O only 0.000 apart, marking (T0367)L26.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)L26.O only 0.000 apart, marking (T0367)L26.O as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)L26.C only 0.000 apart, marking (T0367)L26.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)L26.C only 0.000 apart, marking (T0367)L26.C as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)Y27.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)Y27.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)Y27.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)Y27.CA only 0.000 apart, marking (T0367)Y27.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)Y27.CA only 0.000 apart, marking (T0367)Y27.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)Y27.CA only 0.000 apart, marking (T0367)Y27.CA as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)Y27.CB only 0.000 apart, marking (T0367)Y27.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)Y27.CB only 0.000 apart, marking (T0367)Y27.CB as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)Y27.O only 0.000 apart, marking (T0367)Y27.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)Y27.O only 0.000 apart, marking (T0367)Y27.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)Y27.O only 0.000 apart, marking (T0367)Y27.O as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)Y27.C only 0.000 apart, marking (T0367)Y27.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)Y27.C only 0.000 apart, marking (T0367)Y27.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)Y27.C only 0.000 apart, marking (T0367)Y27.C as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)E28.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)E28.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)E28.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)E28.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)E28.CA only 0.000 apart, marking (T0367)E28.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)E28.CA only 0.000 apart, marking (T0367)E28.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)E28.CA only 0.000 apart, marking (T0367)E28.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)E28.CA only 0.000 apart, marking (T0367)E28.CA as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)E28.CB only 0.000 apart, marking (T0367)E28.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)E28.CB only 0.000 apart, marking (T0367)E28.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)E28.CB only 0.000 apart, marking (T0367)E28.CB as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)E28.O only 0.000 apart, marking (T0367)E28.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)E28.O only 0.000 apart, marking (T0367)E28.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)E28.O only 0.000 apart, marking (T0367)E28.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)E28.O only 0.000 apart, marking (T0367)E28.O as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)E28.C only 0.000 apart, marking (T0367)E28.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)E28.C only 0.000 apart, marking (T0367)E28.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)E28.C only 0.000 apart, marking (T0367)E28.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)E28.C only 0.000 apart, marking (T0367)E28.C as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)R29.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)R29.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)R29.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)R29.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)R29.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)R29.CA only 0.000 apart, marking (T0367)R29.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)R29.CA only 0.000 apart, marking (T0367)R29.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)R29.CA only 0.000 apart, marking (T0367)R29.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)R29.CA only 0.000 apart, marking (T0367)R29.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)R29.CA only 0.000 apart, marking (T0367)R29.CA as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)R29.CB only 0.000 apart, marking (T0367)R29.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)R29.CB only 0.000 apart, marking (T0367)R29.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)R29.CB only 0.000 apart, marking (T0367)R29.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)R29.CB only 0.000 apart, marking (T0367)R29.CB as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)R29.O only 0.000 apart, marking (T0367)R29.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)R29.O only 0.000 apart, marking (T0367)R29.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)R29.O only 0.000 apart, marking (T0367)R29.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)R29.O only 0.000 apart, marking (T0367)R29.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)R29.O only 0.000 apart, marking (T0367)R29.O as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)R29.C only 0.000 apart, marking (T0367)R29.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)R29.C only 0.000 apart, marking (T0367)R29.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)R29.C only 0.000 apart, marking (T0367)R29.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)R29.C only 0.000 apart, marking (T0367)R29.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)R29.C only 0.000 apart, marking (T0367)R29.C as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)L72.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)L72.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)L72.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)L72.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)L72.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)L72.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)L72.CA only 0.000 apart, marking (T0367)L72.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)L72.CA only 0.000 apart, marking (T0367)L72.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)L72.CA only 0.000 apart, marking (T0367)L72.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)L72.CA only 0.000 apart, marking (T0367)L72.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)L72.CA only 0.000 apart, marking (T0367)L72.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)L72.CA only 0.000 apart, marking (T0367)L72.CA as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)L72.CB only 0.000 apart, marking (T0367)L72.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)L72.CB only 0.000 apart, marking (T0367)L72.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)L72.CB only 0.000 apart, marking (T0367)L72.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)L72.CB only 0.000 apart, marking (T0367)L72.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)L72.CB only 0.000 apart, marking (T0367)L72.CB as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)L72.O only 0.000 apart, marking (T0367)L72.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)L72.O only 0.000 apart, marking (T0367)L72.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)L72.O only 0.000 apart, marking (T0367)L72.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)L72.O only 0.000 apart, marking (T0367)L72.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)L72.O only 0.000 apart, marking (T0367)L72.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)L72.O only 0.000 apart, marking (T0367)L72.O as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)L72.C only 0.000 apart, marking (T0367)L72.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)L72.C only 0.000 apart, marking (T0367)L72.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)L72.C only 0.000 apart, marking (T0367)L72.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)L72.C only 0.000 apart, marking (T0367)L72.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)L72.C only 0.000 apart, marking (T0367)L72.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)L72.C only 0.000 apart, marking (T0367)L72.C as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)S73.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)S73.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)S73.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)S73.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)S73.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)S73.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)S73.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)S73.CA only 0.000 apart, marking (T0367)S73.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)S73.CA only 0.000 apart, marking (T0367)S73.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)S73.CA only 0.000 apart, marking (T0367)S73.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)S73.CA only 0.000 apart, marking (T0367)S73.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)S73.CA only 0.000 apart, marking (T0367)S73.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)S73.CA only 0.000 apart, marking (T0367)S73.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)S73.CA only 0.000 apart, marking (T0367)S73.CA as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)S73.CB only 0.000 apart, marking (T0367)S73.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)S73.CB only 0.000 apart, marking (T0367)S73.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)S73.CB only 0.000 apart, marking (T0367)S73.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)S73.CB only 0.000 apart, marking (T0367)S73.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)S73.CB only 0.000 apart, marking (T0367)S73.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)S73.CB only 0.000 apart, marking (T0367)S73.CB as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)S73.O only 0.000 apart, marking (T0367)S73.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)S73.O only 0.000 apart, marking (T0367)S73.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)S73.O only 0.000 apart, marking (T0367)S73.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)S73.O only 0.000 apart, marking (T0367)S73.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)S73.O only 0.000 apart, marking (T0367)S73.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)S73.O only 0.000 apart, marking (T0367)S73.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)S73.O only 0.000 apart, marking (T0367)S73.O as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)S73.C only 0.000 apart, marking (T0367)S73.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)S73.C only 0.000 apart, marking (T0367)S73.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)S73.C only 0.000 apart, marking (T0367)S73.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)S73.C only 0.000 apart, marking (T0367)S73.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)S73.C only 0.000 apart, marking (T0367)S73.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)S73.C only 0.000 apart, marking (T0367)S73.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)S73.C only 0.000 apart, marking (T0367)S73.C as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)D74.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)D74.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)D74.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)D74.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)D74.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)D74.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)D74.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)D74.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)D74.CA only 0.000 apart, marking (T0367)D74.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)D74.CA only 0.000 apart, marking (T0367)D74.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)D74.CA only 0.000 apart, marking (T0367)D74.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)D74.CA only 0.000 apart, marking (T0367)D74.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)D74.CA only 0.000 apart, marking (T0367)D74.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)D74.CA only 0.000 apart, marking (T0367)D74.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)D74.CA only 0.000 apart, marking (T0367)D74.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)D74.CA only 0.000 apart, marking (T0367)D74.CA as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)D74.CB only 0.000 apart, marking (T0367)D74.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)D74.CB only 0.000 apart, marking (T0367)D74.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)D74.CB only 0.000 apart, marking (T0367)D74.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)D74.CB only 0.000 apart, marking (T0367)D74.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)D74.CB only 0.000 apart, marking (T0367)D74.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)D74.CB only 0.000 apart, marking (T0367)D74.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)D74.CB only 0.000 apart, marking (T0367)D74.CB as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)D74.O only 0.000 apart, marking (T0367)D74.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)D74.O only 0.000 apart, marking (T0367)D74.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)D74.O only 0.000 apart, marking (T0367)D74.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)D74.O only 0.000 apart, marking (T0367)D74.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)D74.O only 0.000 apart, marking (T0367)D74.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)D74.O only 0.000 apart, marking (T0367)D74.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)D74.O only 0.000 apart, marking (T0367)D74.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)D74.O only 0.000 apart, marking (T0367)D74.O as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)D74.C only 0.000 apart, marking (T0367)D74.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)D74.C only 0.000 apart, marking (T0367)D74.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)D74.C only 0.000 apart, marking (T0367)D74.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)D74.C only 0.000 apart, marking (T0367)D74.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)D74.C only 0.000 apart, marking (T0367)D74.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)D74.C only 0.000 apart, marking (T0367)D74.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)D74.C only 0.000 apart, marking (T0367)D74.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)D74.C only 0.000 apart, marking (T0367)D74.C as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)D75.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)D75.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)D75.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)D75.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)D75.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)D75.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)D75.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)D75.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)D75.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)D75.CA only 0.000 apart, marking (T0367)D75.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)D75.CA only 0.000 apart, marking (T0367)D75.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)D75.CA only 0.000 apart, marking (T0367)D75.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)D75.CA only 0.000 apart, marking (T0367)D75.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)D75.CA only 0.000 apart, marking (T0367)D75.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)D75.CA only 0.000 apart, marking (T0367)D75.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)D75.CA only 0.000 apart, marking (T0367)D75.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)D75.CA only 0.000 apart, marking (T0367)D75.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)D75.CA only 0.000 apart, marking (T0367)D75.CA as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)D75.CB only 0.000 apart, marking (T0367)D75.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)D75.CB only 0.000 apart, marking (T0367)D75.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)D75.CB only 0.000 apart, marking (T0367)D75.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)D75.CB only 0.000 apart, marking (T0367)D75.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)D75.CB only 0.000 apart, marking (T0367)D75.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)D75.CB only 0.000 apart, marking (T0367)D75.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)D75.CB only 0.000 apart, marking (T0367)D75.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)D75.CB only 0.000 apart, marking (T0367)D75.CB as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)D75.O only 0.000 apart, marking (T0367)D75.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)D75.O only 0.000 apart, marking (T0367)D75.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)D75.O only 0.000 apart, marking (T0367)D75.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)D75.O only 0.000 apart, marking (T0367)D75.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)D75.O only 0.000 apart, marking (T0367)D75.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)D75.O only 0.000 apart, marking (T0367)D75.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)D75.O only 0.000 apart, marking (T0367)D75.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)D75.O only 0.000 apart, marking (T0367)D75.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)D75.O only 0.000 apart, marking (T0367)D75.O as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)D75.C only 0.000 apart, marking (T0367)D75.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)D75.C only 0.000 apart, marking (T0367)D75.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)D75.C only 0.000 apart, marking (T0367)D75.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)D75.C only 0.000 apart, marking (T0367)D75.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)D75.C only 0.000 apart, marking (T0367)D75.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)D75.C only 0.000 apart, marking (T0367)D75.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)D75.C only 0.000 apart, marking (T0367)D75.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)D75.C only 0.000 apart, marking (T0367)D75.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)D75.C only 0.000 apart, marking (T0367)D75.C as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)D76.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)D76.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)D76.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)D76.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)D76.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)D76.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)D76.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)D76.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)D76.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)D76.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)D76.CA only 0.000 apart, marking (T0367)D76.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)D76.CA only 0.000 apart, marking (T0367)D76.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)D76.CA only 0.000 apart, marking (T0367)D76.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)D76.CA only 0.000 apart, marking (T0367)D76.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)D76.CA only 0.000 apart, marking (T0367)D76.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)D76.CA only 0.000 apart, marking (T0367)D76.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)D76.CA only 0.000 apart, marking (T0367)D76.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)D76.CA only 0.000 apart, marking (T0367)D76.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)D76.CA only 0.000 apart, marking (T0367)D76.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)D76.CA only 0.000 apart, marking (T0367)D76.CA as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)D76.CB only 0.000 apart, marking (T0367)D76.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)D76.CB only 0.000 apart, marking (T0367)D76.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)D76.CB only 0.000 apart, marking (T0367)D76.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)D76.CB only 0.000 apart, marking (T0367)D76.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)D76.CB only 0.000 apart, marking (T0367)D76.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)D76.CB only 0.000 apart, marking (T0367)D76.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)D76.CB only 0.000 apart, marking (T0367)D76.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)D76.CB only 0.000 apart, marking (T0367)D76.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)D76.CB only 0.000 apart, marking (T0367)D76.CB as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)D76.O only 0.000 apart, marking (T0367)D76.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)D76.O only 0.000 apart, marking (T0367)D76.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)D76.O only 0.000 apart, marking (T0367)D76.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)D76.O only 0.000 apart, marking (T0367)D76.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)D76.O only 0.000 apart, marking (T0367)D76.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)D76.O only 0.000 apart, marking (T0367)D76.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)D76.O only 0.000 apart, marking (T0367)D76.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)D76.O only 0.000 apart, marking (T0367)D76.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)D76.O only 0.000 apart, marking (T0367)D76.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)D76.O only 0.000 apart, marking (T0367)D76.O as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)D76.C only 0.000 apart, marking (T0367)D76.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)D76.C only 0.000 apart, marking (T0367)D76.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)D76.C only 0.000 apart, marking (T0367)D76.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)D76.C only 0.000 apart, marking (T0367)D76.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)D76.C only 0.000 apart, marking (T0367)D76.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)D76.C only 0.000 apart, marking (T0367)D76.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)D76.C only 0.000 apart, marking (T0367)D76.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)D76.C only 0.000 apart, marking (T0367)D76.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)D76.C only 0.000 apart, marking (T0367)D76.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)D76.C only 0.000 apart, marking (T0367)D76.C as missing
WARNING: atoms too close: (T0367)D76.N and (T0367)C77.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)C77.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)C77.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)C77.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)C77.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)C77.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)C77.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)C77.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)C77.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)C77.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)C77.N only 0.000 apart, marking (T0367)C77.N as missing
WARNING: atoms too close: (T0367)D76.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)C77.CA only 0.000 apart, marking (T0367)C77.CA as missing
WARNING: atoms too close: (T0367)D76.CB and (T0367)C77.CB only 0.000 apart, marking (T0367)C77.CB as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)C77.CB only 0.000 apart, marking (T0367)C77.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)C77.CB only 0.000 apart, marking (T0367)C77.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)C77.CB only 0.000 apart, marking (T0367)C77.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)C77.CB only 0.000 apart, marking (T0367)C77.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)C77.CB only 0.000 apart, marking (T0367)C77.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)C77.CB only 0.000 apart, marking (T0367)C77.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)C77.CB only 0.000 apart, marking (T0367)C77.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)C77.CB only 0.000 apart, marking (T0367)C77.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)C77.CB only 0.000 apart, marking (T0367)C77.CB as missing
WARNING: atoms too close: (T0367)D76.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)C77.O only 0.000 apart, marking (T0367)C77.O as missing
WARNING: atoms too close: (T0367)D76.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)C77.C only 0.000 apart, marking (T0367)C77.C as missing
WARNING: atoms too close: (T0367)C77.N and (T0367)S78.N only 0.000 apart, marking (T0367)C77.N as missing
WARNING: atoms too close: (T0367)D76.N and (T0367)S78.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)S78.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)S78.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)S78.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)S78.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)S78.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)S78.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)S78.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)S78.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)S78.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)S78.N only 0.000 apart, marking (T0367)S78.N as missing
WARNING: atoms too close: (T0367)C77.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)D76.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)S78.CA only 0.000 apart, marking (T0367)S78.CA as missing
WARNING: atoms too close: (T0367)C77.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)D76.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)S78.CB only 0.000 apart, marking (T0367)S78.CB as missing
WARNING: atoms too close: (T0367)C77.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)D76.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)S78.O only 0.000 apart, marking (T0367)S78.O as missing
WARNING: atoms too close: (T0367)C77.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)D76.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)S78.C only 0.000 apart, marking (T0367)S78.C as missing
WARNING: atoms too close: (T0367)S78.N and (T0367)K79.N only 0.000 apart, marking (T0367)S78.N as missing
WARNING: atoms too close: (T0367)C77.N and (T0367)K79.N only 0.000 apart, marking (T0367)C77.N as missing
WARNING: atoms too close: (T0367)D76.N and (T0367)K79.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)K79.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)K79.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)K79.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)K79.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)K79.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)K79.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)K79.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)K79.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)K79.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)K79.N only 0.000 apart, marking (T0367)K79.N as missing
WARNING: atoms too close: (T0367)S78.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)C77.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)D76.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)K79.CA only 0.000 apart, marking (T0367)K79.CA as missing
WARNING: atoms too close: (T0367)S78.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)C77.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)D76.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)K79.CB only 0.000 apart, marking (T0367)K79.CB as missing
WARNING: atoms too close: (T0367)S78.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)C77.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)D76.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)K79.O only 0.000 apart, marking (T0367)K79.O as missing
WARNING: atoms too close: (T0367)S78.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)C77.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)D76.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)K79.C only 0.000 apart, marking (T0367)K79.C as missing
WARNING: atoms too close: (T0367)K79.N and (T0367)L80.N only 0.000 apart, marking (T0367)K79.N as missing
WARNING: atoms too close: (T0367)S78.N and (T0367)L80.N only 0.000 apart, marking (T0367)S78.N as missing
WARNING: atoms too close: (T0367)C77.N and (T0367)L80.N only 0.000 apart, marking (T0367)C77.N as missing
WARNING: atoms too close: (T0367)D76.N and (T0367)L80.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)L80.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)L80.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)L80.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)L80.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)L80.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)L80.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)L80.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)L80.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)L80.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)L80.N only 0.000 apart, marking (T0367)L80.N as missing
WARNING: atoms too close: (T0367)K79.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)S78.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)C77.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)D76.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)L80.CA only 0.000 apart, marking (T0367)L80.CA as missing
WARNING: atoms too close: (T0367)K79.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)S78.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)C77.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)D76.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)L80.CB only 0.000 apart, marking (T0367)L80.CB as missing
WARNING: atoms too close: (T0367)K79.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)S78.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)C77.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)D76.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)L80.O only 0.000 apart, marking (T0367)L80.O as missing
WARNING: atoms too close: (T0367)K79.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)S78.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)C77.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)D76.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)L80.C only 0.000 apart, marking (T0367)L80.C as missing
WARNING: atoms too close: (T0367)L80.N and (T0367)S81.N only 0.000 apart, marking (T0367)L80.N as missing
WARNING: atoms too close: (T0367)K79.N and (T0367)S81.N only 0.000 apart, marking (T0367)K79.N as missing
WARNING: atoms too close: (T0367)S78.N and (T0367)S81.N only 0.000 apart, marking (T0367)S78.N as missing
WARNING: atoms too close: (T0367)C77.N and (T0367)S81.N only 0.000 apart, marking (T0367)C77.N as missing
WARNING: atoms too close: (T0367)D76.N and (T0367)S81.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)S81.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)S81.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)S81.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)S81.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)S81.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)S81.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)S81.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)S81.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)S81.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)S81.N only 0.000 apart, marking (T0367)S81.N as missing
WARNING: atoms too close: (T0367)L80.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)K79.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)S78.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)C77.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)D76.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)S81.CA only 0.000 apart, marking (T0367)S81.CA as missing
WARNING: atoms too close: (T0367)L80.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)K79.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)S78.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)C77.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)D76.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)S81.CB only 0.000 apart, marking (T0367)S81.CB as missing
WARNING: atoms too close: (T0367)L80.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)K79.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)S78.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)C77.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)D76.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)S81.O only 0.000 apart, marking (T0367)S81.O as missing
WARNING: atoms too close: (T0367)L80.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)K79.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)S78.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)C77.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)D76.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)S81.C only 0.000 apart, marking (T0367)S81.C as missing
WARNING: atoms too close: (T0367)S81.N and (T0367)R82.N only 0.000 apart, marking (T0367)S81.N as missing
WARNING: atoms too close: (T0367)L80.N and (T0367)R82.N only 0.000 apart, marking (T0367)L80.N as missing
WARNING: atoms too close: (T0367)K79.N and (T0367)R82.N only 0.000 apart, marking (T0367)K79.N as missing
WARNING: atoms too close: (T0367)S78.N and (T0367)R82.N only 0.000 apart, marking (T0367)S78.N as missing
WARNING: atoms too close: (T0367)C77.N and (T0367)R82.N only 0.000 apart, marking (T0367)C77.N as missing
WARNING: atoms too close: (T0367)D76.N and (T0367)R82.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)R82.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)R82.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)R82.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)R82.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)R82.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)R82.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)R82.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)R82.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)R82.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)R82.N only 0.000 apart, marking (T0367)R82.N as missing
WARNING: atoms too close: (T0367)S81.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)L80.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)K79.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)S78.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)C77.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)D76.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)R82.CA only 0.000 apart, marking (T0367)R82.CA as missing
WARNING: atoms too close: (T0367)S81.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)L80.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)K79.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)S78.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)C77.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)D76.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)R82.CB only 0.000 apart, marking (T0367)R82.CB as missing
WARNING: atoms too close: (T0367)S81.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)L80.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)K79.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)S78.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)C77.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)D76.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)R82.O only 0.000 apart, marking (T0367)R82.O as missing
WARNING: atoms too close: (T0367)S81.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)L80.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)K79.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)S78.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)C77.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)D76.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)R82.C only 0.000 apart, marking (T0367)R82.C as missing
WARNING: atoms too close: (T0367)R82.N and (T0367)A83.N only 0.000 apart, marking (T0367)R82.N as missing
WARNING: atoms too close: (T0367)S81.N and (T0367)A83.N only 0.000 apart, marking (T0367)S81.N as missing
WARNING: atoms too close: (T0367)L80.N and (T0367)A83.N only 0.000 apart, marking (T0367)L80.N as missing
WARNING: atoms too close: (T0367)K79.N and (T0367)A83.N only 0.000 apart, marking (T0367)K79.N as missing
WARNING: atoms too close: (T0367)S78.N and (T0367)A83.N only 0.000 apart, marking (T0367)S78.N as missing
WARNING: atoms too close: (T0367)C77.N and (T0367)A83.N only 0.000 apart, marking (T0367)C77.N as missing
WARNING: atoms too close: (T0367)D76.N and (T0367)A83.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)A83.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)A83.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)A83.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)A83.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)A83.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)A83.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)A83.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)A83.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)A83.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)A83.N only 0.000 apart, marking (T0367)A83.N as missing
WARNING: atoms too close: (T0367)R82.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)S81.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)L80.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)K79.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)S78.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)C77.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)D76.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)A83.CA only 0.000 apart, marking (T0367)A83.CA as missing
WARNING: atoms too close: (T0367)R82.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)S81.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)L80.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)K79.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)S78.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)C77.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)D76.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)A83.CB only 0.000 apart, marking (T0367)A83.CB as missing
WARNING: atoms too close: (T0367)R82.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)S81.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)L80.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)K79.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)S78.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)C77.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)D76.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)A83.O only 0.000 apart, marking (T0367)A83.O as missing
WARNING: atoms too close: (T0367)R82.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)S81.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)L80.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)K79.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)S78.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)C77.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)D76.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)A83.C only 0.000 apart, marking (T0367)A83.C as missing
WARNING: atoms too close: (T0367)A83.N and (T0367)E97.N only 0.000 apart, marking (T0367)A83.N as missing
WARNING: atoms too close: (T0367)R82.N and (T0367)E97.N only 0.000 apart, marking (T0367)R82.N as missing
WARNING: atoms too close: (T0367)S81.N and (T0367)E97.N only 0.000 apart, marking (T0367)S81.N as missing
WARNING: atoms too close: (T0367)L80.N and (T0367)E97.N only 0.000 apart, marking (T0367)L80.N as missing
WARNING: atoms too close: (T0367)K79.N and (T0367)E97.N only 0.000 apart, marking (T0367)K79.N as missing
WARNING: atoms too close: (T0367)S78.N and (T0367)E97.N only 0.000 apart, marking (T0367)S78.N as missing
WARNING: atoms too close: (T0367)C77.N and (T0367)E97.N only 0.000 apart, marking (T0367)C77.N as missing
WARNING: atoms too close: (T0367)D76.N and (T0367)E97.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)E97.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)E97.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)E97.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)E97.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)E97.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)E97.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)E97.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)E97.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)E97.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)E97.N only 0.000 apart, marking (T0367)E97.N as missing
WARNING: atoms too close: (T0367)A83.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)R82.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)S81.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)L80.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)K79.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)S78.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)C77.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)D76.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)E97.CA only 0.000 apart, marking (T0367)E97.CA as missing
WARNING: atoms too close: (T0367)A83.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)R82.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)S81.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)L80.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)K79.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)S78.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)C77.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)D76.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)E97.CB only 0.000 apart, marking (T0367)E97.CB as missing
WARNING: atoms too close: (T0367)A83.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)R82.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)S81.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)L80.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)K79.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)S78.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)C77.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)D76.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)E97.O only 0.000 apart, marking (T0367)E97.O as missing
WARNING: atoms too close: (T0367)A83.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)R82.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)S81.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)L80.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)K79.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)S78.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)C77.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)D76.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)E97.C only 0.000 apart, marking (T0367)E97.C as missing
WARNING: atoms too close: (T0367)E97.N and (T0367)V98.N only 0.000 apart, marking (T0367)E97.N as missing
WARNING: atoms too close: (T0367)A83.N and (T0367)V98.N only 0.000 apart, marking (T0367)A83.N as missing
WARNING: atoms too close: (T0367)R82.N and (T0367)V98.N only 0.000 apart, marking (T0367)R82.N as missing
WARNING: atoms too close: (T0367)S81.N and (T0367)V98.N only 0.000 apart, marking (T0367)S81.N as missing
WARNING: atoms too close: (T0367)L80.N and (T0367)V98.N only 0.000 apart, marking (T0367)L80.N as missing
WARNING: atoms too close: (T0367)K79.N and (T0367)V98.N only 0.000 apart, marking (T0367)K79.N as missing
WARNING: atoms too close: (T0367)S78.N and (T0367)V98.N only 0.000 apart, marking (T0367)S78.N as missing
WARNING: atoms too close: (T0367)C77.N and (T0367)V98.N only 0.000 apart, marking (T0367)C77.N as missing
WARNING: atoms too close: (T0367)D76.N and (T0367)V98.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)V98.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)V98.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)V98.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)V98.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)V98.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)V98.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)V98.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)V98.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)V98.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)V98.N only 0.000 apart, marking (T0367)V98.N as missing
WARNING: atoms too close: (T0367)E97.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)A83.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)R82.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)S81.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)L80.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)K79.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)S78.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)C77.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)D76.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)V98.CA only 0.000 apart, marking (T0367)V98.CA as missing
WARNING: atoms too close: (T0367)E97.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)A83.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)R82.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)S81.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)L80.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)K79.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)S78.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)C77.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)D76.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)V98.CB only 0.000 apart, marking (T0367)V98.CB as missing
WARNING: atoms too close: (T0367)E97.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)A83.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)R82.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)S81.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)L80.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)K79.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)S78.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)C77.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)D76.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)V98.O only 0.000 apart, marking (T0367)V98.O as missing
WARNING: atoms too close: (T0367)E97.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)A83.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)R82.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)S81.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)L80.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)K79.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)S78.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)C77.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)D76.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)V98.C only 0.000 apart, marking (T0367)V98.C as missing
WARNING: atoms too close: (T0367)V98.N and (T0367)S99.N only 0.000 apart, marking (T0367)V98.N as missing
WARNING: atoms too close: (T0367)E97.N and (T0367)S99.N only 0.000 apart, marking (T0367)E97.N as missing
WARNING: atoms too close: (T0367)A83.N and (T0367)S99.N only 0.000 apart, marking (T0367)A83.N as missing
WARNING: atoms too close: (T0367)R82.N and (T0367)S99.N only 0.000 apart, marking (T0367)R82.N as missing
WARNING: atoms too close: (T0367)S81.N and (T0367)S99.N only 0.000 apart, marking (T0367)S81.N as missing
WARNING: atoms too close: (T0367)L80.N and (T0367)S99.N only 0.000 apart, marking (T0367)L80.N as missing
WARNING: atoms too close: (T0367)K79.N and (T0367)S99.N only 0.000 apart, marking (T0367)K79.N as missing
WARNING: atoms too close: (T0367)S78.N and (T0367)S99.N only 0.000 apart, marking (T0367)S78.N as missing
WARNING: atoms too close: (T0367)C77.N and (T0367)S99.N only 0.000 apart, marking (T0367)C77.N as missing
WARNING: atoms too close: (T0367)D76.N and (T0367)S99.N only 0.000 apart, marking (T0367)D76.N as missing
WARNING: atoms too close: (T0367)D75.N and (T0367)S99.N only 0.000 apart, marking (T0367)D75.N as missing
WARNING: atoms too close: (T0367)D74.N and (T0367)S99.N only 0.000 apart, marking (T0367)D74.N as missing
WARNING: atoms too close: (T0367)S73.N and (T0367)S99.N only 0.000 apart, marking (T0367)S73.N as missing
WARNING: atoms too close: (T0367)L72.N and (T0367)S99.N only 0.000 apart, marking (T0367)L72.N as missing
WARNING: atoms too close: (T0367)R29.N and (T0367)S99.N only 0.000 apart, marking (T0367)R29.N as missing
WARNING: atoms too close: (T0367)E28.N and (T0367)S99.N only 0.000 apart, marking (T0367)E28.N as missing
WARNING: atoms too close: (T0367)Y27.N and (T0367)S99.N only 0.000 apart, marking (T0367)Y27.N as missing
WARNING: atoms too close: (T0367)L26.N and (T0367)S99.N only 0.000 apart, marking (T0367)L26.N as missing
WARNING: atoms too close: (T0367)G25.N and (T0367)S99.N only 0.000 apart, marking (T0367)G25.N as missing
WARNING: atoms too close: (T0367)M24.N and (T0367)S99.N only 0.000 apart, marking (T0367)S99.N as missing
WARNING: atoms too close: (T0367)V98.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)E97.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)A83.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)R82.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)S81.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)L80.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)K79.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)S78.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)C77.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)D76.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)D75.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)D74.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)S73.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)L72.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)R29.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)E28.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)Y27.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)L26.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)G25.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)M24.CA and (T0367)S99.CA only 0.000 apart, marking (T0367)S99.CA as missing
WARNING: atoms too close: (T0367)V98.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)E97.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)A83.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)R82.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)S81.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)L80.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)K79.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)S78.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)C77.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)D76.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)D75.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)D74.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)S73.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)L72.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)R29.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)E28.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)Y27.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)L26.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)M24.CB and (T0367)S99.CB only 0.000 apart, marking (T0367)S99.CB as missing
WARNING: atoms too close: (T0367)V98.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)E97.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)A83.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)R82.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)S81.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)L80.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)K79.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)S78.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)C77.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)D76.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)D75.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)D74.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)S73.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)L72.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)R29.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)E28.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)Y27.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)L26.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)G25.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)M24.O and (T0367)S99.O only 0.000 apart, marking (T0367)S99.O as missing
WARNING: atoms too close: (T0367)V98.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)E97.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)A83.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)R82.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)S81.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)L80.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)K79.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)S78.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)C77.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)D76.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)D75.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)D74.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)S73.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)L72.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)R29.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)E28.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)Y27.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)L26.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)G25.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
WARNING: atoms too close: (T0367)M24.C and (T0367)S99.C only 0.000 apart, marking (T0367)S99.C as missing
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation panther2_TS1
# ReadConformPDB reading from PDB file servers/panther3_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0367 can't currently be optimized by undertaker
# naming current conformation panther3_TS1
# ReadConformPDB reading from PDB file servers/shub_TS1.pdb.gz looking for model 1
# Found a chain break before 122
# copying to AlignedFragments data structure
# naming current conformation shub_TS1
# command:Using radius: 8.0000
Metaserver mode
NUMB_ALIGNS: 254
Adding 3428 constraints to all.constraints
Done adding distance constraints
# command:Reading probabilities from probabilities.dat
Reading constraints from ConstraintSet all.constraints
maxweight: 167.0000
Optimizing...
 Probability sum: -186.4649, CN propb: -186.4649 weights: 0.5811 constraints: 183
# command:Found ConstraintSet
# PrintContacts align.constraints_meta01
Number of constraints in align.constraints 183
# command:Found ConstraintSet
# PrintContacts align_bonus.constraints_meta01
Number of constraints in align.constraints.bonus 183
# command:Found ConstraintSet
# PrintContacts rejected.constraints_meta01
Number of constraints in rejected.constraints 3245
# command:Found ConstraintSet
# PrintContacts rejected_bonus.constraints_meta01
Number of constraints in rejected.constraints.bonus 3245
# command:Found ConstraintSet
# PrintContacts non_contacts.constraints_meta01
Number of constraints in noncontact.constraints 0
# command:Found ConstraintSet
# PrintContacts non_contacts_bonus.constraints_meta01
Number of constraints in noncontact.constraints.bonus 0
# command:Found ConstraintSet
# PrintContacts all.constraints_meta01
Number of constraints in all.constraints 3428
# command: