# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/
# command:# reading dunbrack-2191.atoms
#
#computed average backbone with maximum peptide_sq_deviance = 0.002
# computed average trans backbone unit from 53157 examples
# computed average trans backbone unit before proline from 2010 examples
# computed average cis backbone unit from 97 examples
# trans (non-proline) backbone unit:
#	  CA= -2.2087 1.0126 -0.0030
#	   O= -0.1499 2.2440 0.0016
#	   C= -0.6889 1.1368 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4581 -0.0000 0.0000
# cis backbone unit:
#	  CA= -0.1436 2.4534 -0.0002
#	   O= -2.0284 0.9742 0.0015
#	   C= -0.8018 1.0771 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4668 0.0000 0.0000
# trans backbone unit before proline:
#	  CA= -2.2100 1.0631 -0.0014
#	   O= -0.1236 2.2458 0.0075
#	   C= -0.6872 1.1517 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4660 0.0000 0.0000


# After reading dunbrack-2191.atoms have 2191 chains in training database
#  Count of chains,residues,atoms: 2191,500310,3902258
#  493341 residues have no bad marker
#  3226 residues lack atoms needed to compute omega
#  1453 residues have cis peptide
#  number of each bad type:
#	NON_STANDARD_RESIDUE	4
#	HAS_OXT	1167
#	TOO_MANY_ATOMS	1
#	TOO_FEW_ATOMS	3052
#	HAS_UNKNOWN_ATOMS	9
#	HAS_DUPLICATE_ATOMS	0
#	CHAIN_BREAK_BEFORE	979
#	NON_PLANAR_PEPTIDE	888
#	BAD_PEPTIDE	2680
#  Note: may sum to more than number of residues, 
#    because one residue may have multiple problems
# command:# Reading rotamer library from dunbrack-2191.rot
# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/
# command:# ReadAtomType exp-pdb.types
Read AtomType exp-pdb with 49 types.
# command:# ReadClashTable exp-pdb-2191-2symm.clash
# Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2
# command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0331/
# command:# Making conformation for sequence T0331 numbered 1 through 149
Created new target T0331 from T0331.a2m
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0331/
# command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0331//projects/compbio/experiments/protein-predict/casp7/T0331/align.constraints_v3.costfcn or /projects/compbio/experiments/protein-predict/casp7/T0331//projects/compbio/experiments/protein-predict/casp7/T0331/align.constraints_v3.costfcn.gz for input
Trying /projects/compbio/experiments/protein-predict/casp7/T0331/align.constraints_v3.costfcn
# reading script from file /projects/compbio/experiments/protein-predict/casp7/T0331/align.constraints_v3.costfcn
# future Constraint commands -> align
# future HelixConstraint commands -> align
# future StrandConstraint commands -> align
# future SheetConstraint commands -> align
# future Hbond commands -> align
# future SSbond commands -> align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)V62.CB) [> 3.8756 = 6.4594 < 8.3972] w=1.0000 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)M64.CB) [> 3.2640 = 5.4399 < 7.0719] w=1.0000 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)A63.CB) [> 4.2904 = 7.1507 < 9.2958] w=1.0000 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)V62.CB) [> 3.6576 = 6.0959 < 7.9247] w=1.0000 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)M64.CB) [> 4.0734 = 6.7890 < 8.8257] w=1.0000 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)T65.CB) [> 3.7852 = 6.3087 < 8.2013] w=1.0000 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)M64.CB) [> 3.6744 = 6.1239 < 7.9611] w=1.0000 to align
# Constraint # added constraint: constraint((T0331)I42.CB, (T0331)M64.CB) [> 3.8321 = 6.3868 < 8.3028] w=0.9853 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)H28.CB) [> 3.9829 = 6.6382 < 8.6296] w=0.9853 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)A29.CB) [> 4.1294 = 6.8823 < 8.9470] w=0.9853 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)A29.CB) [> 3.3944 = 5.6574 < 7.3546] w=0.9853 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)A29.CB) [> 3.0872 = 5.1454 < 6.6890] w=0.9839 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)A66.CB) [> 3.2290 = 5.3816 < 6.9961] w=0.9839 to align
# Constraint # added constraint: constraint((T0331)A63.CB, (T0331)V79.CB) [> 4.1382 = 6.8970 < 8.9661] w=0.9726 to align
# Constraint # added constraint: constraint((T0331)A63.CB, (T0331)R78.CB) [> 3.8014 = 6.3357 < 8.2364] w=0.9726 to align
# Constraint # added constraint: constraint((T0331)I34.CB, (T0331)F44.CB) [> 3.4252 = 5.7087 < 7.4213] w=0.9726 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)H31.CB) [> 3.5703 = 5.9504 < 7.7355] w=0.9707 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)H31.CB) [> 3.5831 = 5.9717 < 7.7633] w=0.9696 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)A63.CB) [> 2.6772 = 4.4620 < 5.8005] w=0.9693 to align
# Constraint # added constraint: constraint((T0331)V62.CB, (T0331)G81.CA) [> 3.5176 = 5.8627 < 7.6215] w=0.9589 to align
# Constraint # added constraint: constraint((T0331)R61.CB, (T0331)G81.CA) [> 3.8357 = 6.3929 < 8.3108] w=0.9589 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)Q55.CB) [> 2.6722 = 4.4536 < 5.7897] w=0.9560 to align
# Constraint # added constraint: constraint((T0331)D22.CB, (T0331)Q55.CB) [> 3.3108 = 5.5179 < 7.1733] w=0.9560 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)R30.CB) [> 4.2067 = 7.0111 < 9.1145] w=0.9550 to align
# Constraint # added constraint: constraint((T0331)V15.CB, (T0331)H31.CB) [> 3.4663 = 5.7772 < 7.5103] w=0.9532 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)V62.CB) [> 3.3544 = 5.5908 < 7.2680] w=0.9518 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)T65.CB) [> 2.8731 = 4.7886 < 6.2251] w=0.9518 to align
# Constraint # added constraint: constraint((T0331)A66.CB, (T0331)V77.CB) [> 2.9717 = 4.9528 < 6.4386] w=0.9429 to align
# Constraint # added constraint: constraint((T0331)V62.CB, (T0331)E80.CB) [> 4.5373 = 7.5622 < 9.8308] w=0.9268 to align
# Constraint # added constraint: constraint((T0331)M64.CB, (T0331)V79.CB) [> 2.7439 = 4.5732 < 5.9451] w=0.9245 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)R30.CB) [> 3.4220 = 5.7033 < 7.4143] w=0.9215 to align
# Constraint # added constraint: constraint((T0331)Q60.CB, (T0331)T82.CB) [> 3.0668 = 5.1112 < 6.6446] w=0.9150 to align
# Constraint # added constraint: constraint((T0331)I42.CB, (T0331)V79.CB) [> 3.9188 = 6.5313 < 8.4907] w=0.9141 to align
# Constraint # added constraint: constraint((T0331)T65.CB, (T0331)V77.CB) [> 4.1744 = 6.9574 < 9.0446] w=0.9108 to align
# Constraint # added constraint: constraint((T0331)M64.CB, (T0331)R78.CB) [> 4.3701 = 7.2835 < 9.4686] w=0.9108 to align
# Constraint # added constraint: constraint((T0331)I34.CB, (T0331)F43.CB) [> 4.0318 = 6.7197 < 8.7356] w=0.9098 to align
# Constraint # added constraint: constraint((T0331)H28.CB, (T0331)F52.CB) [> 3.9639 = 6.6065 < 8.5884] w=0.9078 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)M64.CB) [> 4.4473 = 7.4122 < 9.6359] w=0.8961 to align
# Constraint # added constraint: constraint((T0331)T65.CB, (T0331)R78.CB) [> 3.0130 = 5.0217 < 6.5282] w=0.8947 to align
# Constraint # added constraint: constraint((T0331)A63.CB, (T0331)E80.CB) [> 3.1656 = 5.2761 < 6.8589] w=0.8947 to align
# Constraint # added constraint: constraint((T0331)L21.CB, (T0331)D59.CB) [> 3.1530 = 5.2551 < 6.8316] w=0.8904 to align
# Constraint # added constraint: constraint((T0331)L21.CB, (T0331)R61.CB) [> 4.0890 = 6.8150 < 8.8595] w=0.8890 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)F44.CB) [> 4.0962 = 6.8269 < 8.8750] w=0.8744 to align
# Constraint # added constraint: constraint((T0331)Q60.CB, (T0331)A83.CB) [> 3.2931 = 5.4886 < 7.1351] w=0.8507 to align
# Constraint # added constraint: constraint((T0331)L56.CB, (T0331)A83.CB) [> 3.1117 = 5.1861 < 6.7420] w=0.8507 to align
# Constraint # added constraint: constraint((T0331)A63.CB, (T0331)G81.CA) [> 4.4020 = 7.3367 < 9.5377] w=0.8465 to align
# Constraint # added constraint: constraint((T0331)V62.CB, (T0331)A83.CB) [> 2.8892 = 4.8153 < 6.2599] w=0.8465 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)L56.CB) [> 3.4001 = 5.6669 < 7.3669] w=0.8450 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)A32.CB) [> 3.5703 = 5.9506 < 7.7358] w=0.8449 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)H31.CB) [> 4.5241 = 7.5402 < 9.8023] w=0.8440 to align
# Constraint # added constraint: constraint((T0331)V62.CB, (T0331)T82.CB) [> 4.2773 = 7.1288 < 9.2675] w=0.8417 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)I34.CB) [> 3.7457 = 6.2428 < 8.1156] w=0.8334 to align
# Constraint # added constraint: constraint((T0331)A32.CB, (T0331)F44.CB) [> 2.9181 = 4.8635 < 6.3226] w=0.8303 to align
# Constraint # added constraint: constraint((T0331)R30.CB, (T0331)F52.CB) [> 3.5459 = 5.9099 < 7.6829] w=0.8293 to align
# Constraint # added constraint: constraint((T0331)A66.CB, (T0331)V76.CB) [> 3.9337 = 6.5561 < 8.5229] w=0.8118 to align
# Constraint # added constraint: constraint((T0331)T65.CB, (T0331)V76.CB) [> 3.6465 = 6.0775 < 7.9008] w=0.8118 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)A32.CB) [> 3.1402 = 5.2337 < 6.8038] w=0.8114 to align
# Constraint # added constraint: constraint((T0331)A32.CB, (T0331)T46.CB) [> 4.0541 = 6.7568 < 8.7838] w=0.7988 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)F52.CB) [> 3.1494 = 5.2490 < 6.8237] w=0.7969 to align
# Constraint # added constraint: constraint((T0331)T65.CB, (T0331)V79.CB) [> 4.4965 = 7.4941 < 9.7424] w=0.7935 to align
# Constraint # added constraint: constraint((T0331)V15.CB, (T0331)H33.CB) [> 3.6437 = 6.0729 < 7.8948] w=0.7840 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)D59.CB) [> 4.1927 = 6.9879 < 9.0842] w=0.7823 to align
# Constraint # added constraint: constraint((T0331)V15.CB, (T0331)A32.CB) [> 4.2293 = 7.0488 < 9.1634] w=0.7813 to align
# Constraint # added constraint: constraint((T0331)H33.CB, (T0331)M45.CB) [> 4.3681 = 7.2802 < 9.4643] w=0.7725 to align
# Constraint # added constraint: constraint((T0331)H33.CB, (T0331)F44.CB) [> 4.0233 = 6.7055 < 8.7171] w=0.7725 to align
# Constraint # added constraint: constraint((T0331)Q60.CB, (T0331)R84.CB) [> 4.1382 = 6.8969 < 8.9660] w=0.7690 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)T65.CB) [> 4.4120 = 7.3534 < 9.5594] w=0.7406 to align
# Constraint # added constraint: constraint((T0331)I67.CB, (T0331)V76.CB) [> 2.8541 = 4.7569 < 6.1840] w=0.7342 to align
# Constraint # added constraint: constraint((T0331)V15.CB, (T0331)I34.CB) [> 4.1994 = 6.9990 < 9.0986] w=0.7219 to align
# Constraint # added constraint: constraint((T0331)V15.CB, (T0331)A66.CB) [> 4.4742 = 7.4571 < 9.6942] w=0.7209 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)A66.CB) [> 4.6299 = 7.7165 < 10.0315] w=0.6826 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)V94.CB) [> 3.7940 = 6.3234 < 8.2205] w=0.6766 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)A66.CB) [> 3.7027 = 6.1712 < 8.0225] w=0.6361 to align
# Constraint # added constraint: constraint((T0331)I34.CB, (T0331)M64.CB) [> 4.3095 = 7.1825 < 9.3373] w=0.6260 to align
# Constraint # added constraint: constraint((T0331)G81.CA, (T0331)I118.CB) [> 3.3389 = 5.5648 < 7.2342] w=0.6072 to align
# Constraint # added constraint: constraint((T0331)K14.CB, (T0331)H33.CB) [> 3.7178 = 6.1964 < 8.0553] w=0.6072 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)A66.CB) [> 3.6699 = 6.1165 < 7.9514] w=0.6024 to align
# Constraint # added constraint: constraint((T0331)I6.CB, (T0331)V77.CB) [> 3.3229 = 5.5381 < 7.1996] w=0.6024 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)R61.CB) [> 4.4979 = 7.4965 < 9.7455] w=0.5936 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)H33.CB) [> 4.4785 = 7.4641 < 9.7033] w=0.5914 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)A32.CB) [> 4.4234 = 7.3724 < 9.5842] w=0.5823 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)V115.CB) [> 3.2834 = 5.4723 < 7.1140] w=0.5757 to align
# Constraint # added constraint: constraint((T0331)F43.CB, (T0331)Q117.CB) [> 3.2057 = 5.3429 < 6.9458] w=0.5757 to align
# Constraint # added constraint: constraint((T0331)E80.CB, (T0331)G121.CA) [> 3.6724 = 6.1207 < 7.9569] w=0.5754 to align
# Constraint # added constraint: constraint((T0331)V86.CB, (T0331)V115.CB) [> 2.5948 = 4.3247 < 5.6221] w=0.5751 to align
# Constraint # added constraint: constraint((T0331)F44.CB, (T0331)F116.CB) [> 3.1667 = 5.2779 < 6.8612] w=0.5751 to align
# Constraint # added constraint: constraint((T0331)I42.CB, (T0331)I118.CB) [> 2.9471 = 4.9118 < 6.3854] w=0.5751 to align
# Constraint # added constraint: constraint((T0331)V79.CB, (T0331)A120.CB) [> 3.2606 = 5.4344 < 7.0647] w=0.5751 to align
# Constraint # added constraint: constraint((T0331)G81.CA, (T0331)Y119.CB) [> 3.4638 = 5.7730 < 7.5049] w=0.5751 to align
# Constraint # added constraint: constraint((T0331)T82.CB, (T0331)Y119.CB) [> 3.3405 = 5.5675 < 7.2377] w=0.5751 to align
# Constraint # added constraint: constraint((T0331)A83.CB, (T0331)F116.CB) [> 2.9883 = 4.9805 < 6.4746] w=0.5751 to align
# Constraint # added constraint: constraint((T0331)A66.CB, (T0331)V79.CB) [> 4.5551 = 7.5919 < 9.8694] w=0.5687 to align
# Constraint # added constraint: constraint((T0331)F43.CB, (T0331)F116.CB) [> 4.1452 = 6.9086 < 8.9812] w=0.5604 to align
# Constraint # added constraint: constraint((T0331)F43.CB, (T0331)V115.CB) [> 3.5413 = 5.9022 < 7.6729] w=0.5604 to align
# Constraint # added constraint: constraint((T0331)V62.CB, (T0331)I118.CB) [> 3.4303 = 5.7172 < 7.4324] w=0.5596 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)A66.CB) [> 3.0160 = 5.0266 < 6.5346] w=0.5595 to align
# Constraint # added constraint: constraint((T0331)L91.CB, (T0331)V115.CB) [> 3.1517 = 5.2528 < 6.8287] w=0.5593 to align
# Constraint # added constraint: constraint((T0331)R84.CB, (T0331)Q117.CB) [> 3.3033 = 5.5055 < 7.1572] w=0.5590 to align
# Constraint # added constraint: constraint((T0331)A83.CB, (T0331)Q117.CB) [> 4.2372 = 7.0620 < 9.1806] w=0.5590 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)V77.CB) [> 3.7327 = 6.2213 < 8.0876] w=0.5579 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)V77.CB) [> 3.4037 = 5.6729 < 7.3748] w=0.5542 to align
# Constraint # added constraint: constraint((T0331)V79.CB, (T0331)I118.CB) [> 3.8954 = 6.4923 < 8.4400] w=0.5458 to align
# Constraint # added constraint: constraint((T0331)P85.CB, (T0331)F116.CB) [> 3.5650 = 5.9416 < 7.7241] w=0.5436 to align
# Constraint # added constraint: constraint((T0331)T46.CB, (T0331)F116.CB) [> 3.8219 = 6.3699 < 8.2809] w=0.5436 to align
# Constraint # added constraint: constraint((T0331)F44.CB, (T0331)V115.CB) [> 4.3360 = 7.2267 < 9.3947] w=0.5436 to align
# Constraint # added constraint: constraint((T0331)I42.CB, (T0331)Q117.CB) [> 4.2373 = 7.0622 < 9.1808] w=0.5436 to align
# Constraint # added constraint: constraint((T0331)R84.CB, (T0331)F116.CB) [> 4.0515 = 6.7525 < 8.7782] w=0.5436 to align
# Constraint # added constraint: constraint((T0331)P85.CB, (T0331)V115.CB) [> 4.2900 = 7.1500 < 9.2950] w=0.5429 to align
# Constraint # added constraint: constraint((T0331)G81.CA, (T0331)A120.CB) [> 3.5277 = 5.8795 < 7.6433] w=0.5429 to align
# Constraint # added constraint: constraint((T0331)R78.CB, (T0331)G123.CA) [> 3.6010 = 6.0016 < 7.8021] w=0.5304 to align
# Constraint # added constraint: constraint((T0331)V77.CB, (T0331)G123.CA) [> 4.1711 = 6.9518 < 9.0373] w=0.5304 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)Q114.CB) [> 4.2058 = 7.0097 < 9.1125] w=0.5283 to align
# Constraint # added constraint: constraint((T0331)V86.CB, (T0331)F116.CB) [> 4.0923 = 6.8205 < 8.8667] w=0.5275 to align
# Constraint # added constraint: constraint((T0331)P85.CB, (T0331)Q114.CB) [> 3.4560 = 5.7601 < 7.4881] w=0.5269 to align
# Constraint # added constraint: constraint((T0331)T46.CB, (T0331)Q114.CB) [> 3.5979 = 5.9964 < 7.7953] w=0.5269 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)S68.CB) [> 3.7534 = 6.2557 < 8.1324] w=0.5238 to align
# Constraint # added constraint: constraint((T0331)R78.CB, (T0331)F124.CB) [> 2.7837 = 4.6394 < 6.0313] w=0.5143 to align
# Constraint # added constraint: constraint((T0331)K14.CB, (T0331)I34.CB) [> 3.6432 = 6.0720 < 7.8936] w=0.5119 to align
# Constraint # added constraint: constraint((T0331)G81.CA, (T0331)G121.CA) [> 3.0409 = 5.0682 < 6.5886] w=0.5114 to align
# Constraint # added constraint: constraint((T0331)T82.CB, (T0331)I118.CB) [> 4.2129 = 7.0215 < 9.1279] w=0.5114 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)Q75.CB) [> 3.6943 = 6.1572 < 8.0044] w=0.5075 to align
# Constraint # added constraint: constraint((T0331)V79.CB, (T0331)H122.CB) [> 4.3960 = 7.3266 < 9.5246] w=0.4979 to align
# Constraint # added constraint: constraint((T0331)V79.CB, (T0331)G123.CA) [> 3.1956 = 5.3260 < 6.9238] w=0.4959 to align
# Constraint # added constraint: constraint((T0331)V86.CB, (T0331)Q117.CB) [> 3.4906 = 5.8177 < 7.5630] w=0.4954 to align
# Constraint # added constraint: constraint((T0331)A83.CB, (T0331)I118.CB) [> 2.9358 = 4.8930 < 6.3609] w=0.4954 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)S68.CB) [> 4.1020 = 6.8367 < 8.8877] w=0.4950 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)I67.CB) [> 4.2183 = 7.0305 < 9.1397] w=0.4927 to align
# Constraint # added constraint: constraint((T0331)V94.CB, (T0331)V115.CB) [> 3.4128 = 5.6880 < 7.3943] w=0.4822 to align
# Constraint # added constraint: constraint((T0331)G41.CA, (T0331)Q117.CB) [> 3.7323 = 6.2205 < 8.0866] w=0.4801 to align
# Constraint # added constraint: constraint((T0331)V77.CB, (T0331)Y125.CB) [> 3.1525 = 5.2542 < 6.8304] w=0.4798 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)F116.CB) [> 4.3885 = 7.3142 < 9.5085] w=0.4761 to align
# Constraint # added constraint: constraint((T0331)E80.CB, (T0331)A120.CB) [> 4.1384 = 6.8973 < 8.9665] w=0.4755 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)A36.CB) [> 3.4274 = 5.7124 < 7.4261] w=0.4737 to align
# Constraint # added constraint: constraint((T0331)E23.CB, (T0331)D59.CB) [> 4.2496 = 7.0827 < 9.2074] w=0.4718 to align
# Constraint # added constraint: constraint((T0331)S47.CB, (T0331)M113.CB) [> 3.8165 = 6.3609 < 8.2691] w=0.4675 to align
# Constraint # added constraint: constraint((T0331)Y90.CB, (T0331)V115.CB) [> 3.9257 = 6.5429 < 8.5057] w=0.4662 to align
# Constraint # added constraint: constraint((T0331)E80.CB, (T0331)G123.CA) [> 3.7681 = 6.2802 < 8.1643] w=0.4638 to align
# Constraint # added constraint: constraint((T0331)I67.CB, (T0331)V77.CB) [> 4.5397 = 7.5662 < 9.8360] w=0.4580 to align
# Constraint # added constraint: constraint((T0331)E80.CB, (T0331)H122.CB) [> 2.5589 = 4.2648 < 5.5442] w=0.4501 to align
# Constraint # added constraint: constraint((T0331)P48.CB, (T0331)M113.CB) [> 4.1848 = 6.9746 < 9.0670] w=0.4501 to align
# Constraint # added constraint: constraint((T0331)G41.CA, (T0331)I118.CB) [> 3.7383 = 6.2305 < 8.0996] w=0.4480 to align
# Constraint # added constraint: constraint((T0331)S47.CB, (T0331)Q114.CB) [> 4.2700 = 7.1167 < 9.2517] w=0.4469 to align
# Constraint # added constraint: constraint((T0331)G81.CA, (T0331)H122.CB) [> 4.1818 = 6.9696 < 9.0605] w=0.4340 to align
# Constraint # added constraint: constraint((T0331)I6.CB, (T0331)Y125.CB) [> 3.6809 = 6.1347 < 7.9752] w=0.4324 to align
# Constraint # added constraint: constraint((T0331)I42.CB, (T0331)A120.CB) [> 4.0302 = 6.7171 < 8.7322] w=0.4312 to align
# Constraint # added constraint: constraint((T0331)A32.CB, (T0331)M45.CB) [> 4.4991 = 7.4984 < 9.7480] w=0.4303 to align
# Constraint # added constraint: constraint((T0331)M64.CB, (T0331)E80.CB) [> 4.6259 = 7.7098 < 10.0228] w=0.4289 to align
# Constraint # added constraint: constraint((T0331)F43.CB, (T0331)V94.CB) [> 3.2780 = 5.4634 < 7.1024] w=0.4259 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)A83.CB) [> 4.5324 = 7.5541 < 9.8203] w=0.4256 to align
# Constraint # added constraint: constraint((T0331)L56.CB, (T0331)F116.CB) [> 3.8124 = 6.3539 < 8.2601] w=0.4179 to align
# Constraint # added constraint: constraint((T0331)V86.CB, (T0331)Q114.CB) [> 3.9253 = 6.5422 < 8.5049] w=0.4179 to align
# Constraint # added constraint: constraint((T0331)V79.CB, (T0331)G121.CA) [> 4.2562 = 7.0936 < 9.2217] w=0.4148 to align
# Constraint # added constraint: constraint((T0331)M57.CB, (T0331)P85.CB) [> 4.0514 = 6.7524 < 8.7781] w=0.4133 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)H51.CB) [> 4.6090 = 7.6817 < 9.9862] w=0.4076 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)I67.CB) [> 4.2204 = 7.0340 < 9.1442] w=0.3992 to align
# Constraint # added constraint: constraint((T0331)G41.CA, (T0331)Y119.CB) [> 3.5028 = 5.8380 < 7.5894] w=0.3990 to align
# Constraint # added constraint: constraint((T0331)T46.CB, (T0331)M113.CB) [> 4.1354 = 6.8923 < 8.9600] w=0.3988 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)L91.CB) [> 4.4318 = 7.3863 < 9.6022] w=0.3903 to align
# Constraint # added constraint: constraint((T0331)S47.CB, (T0331)T112.CB) [> 3.6218 = 6.0364 < 7.8473] w=0.3886 to align
# Constraint # added constraint: constraint((T0331)L91.CB, (T0331)M113.CB) [> 3.9763 = 6.6271 < 8.6152] w=0.3709 to align
# Constraint # added constraint: constraint((T0331)I34.CB, (T0331)A66.CB) [> 4.6521 = 7.7534 < 10.0795] w=0.3705 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)I42.CB) [> 4.3320 = 7.2200 < 9.3860] w=0.3666 to align
# Constraint # added constraint: constraint((T0331)V76.CB, (T0331)H126.CB) [> 2.9858 = 4.9764 < 6.4693] w=0.3521 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)I34.CB) [> 4.2690 = 7.1151 < 9.2496] w=0.3481 to align
# Constraint # added constraint: constraint((T0331)A32.CB, (T0331)M64.CB) [> 4.5494 = 7.5824 < 9.8571] w=0.3421 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)A29.CB) [> 4.5870 = 7.6450 < 9.9385] w=0.3419 to align
# Constraint # added constraint: constraint((T0331)P48.CB, (T0331)T112.CB) [> 2.8829 = 4.8049 < 6.2463] w=0.3405 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)Y101.CB) [> 3.6304 = 6.0507 < 7.8659] w=0.3326 to align
# Constraint # added constraint: constraint((T0331)D12.CB, (T0331)S68.CB) [> 3.7226 = 6.2043 < 8.0657] w=0.3323 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)R30.CB) [> 4.3548 = 7.2580 < 9.4354] w=0.3323 to align
# Constraint # added constraint: constraint((T0331)Q75.CB, (T0331)H126.CB) [> 4.0269 = 6.7115 < 8.7249] w=0.3214 to align
# Constraint # added constraint: constraint((T0331)M64.CB, (T0331)V77.CB) [> 4.2215 = 7.0358 < 9.1466] w=0.3179 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)I67.CB) [> 4.2790 = 7.1316 < 9.2711] w=0.3159 to align
# Constraint # added constraint: constraint((T0331)E49.CB, (T0331)T112.CB) [> 3.6906 = 6.1511 < 7.9964] w=0.3094 to align
# Constraint # added constraint: constraint((T0331)R78.CB, (T0331)H122.CB) [> 4.1687 = 6.9479 < 9.0322] w=0.3081 to align
# Constraint # added constraint: constraint((T0331)A66.CB, (T0331)Q75.CB) [> 4.1593 = 6.9321 < 9.0118] w=0.3060 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)T65.CB) [> 4.6265 = 7.7108 < 10.0240] w=0.3055 to align
# Constraint # added constraint: constraint((T0331)V76.CB, (T0331)Y125.CB) [> 4.1722 = 6.9536 < 9.0397] w=0.2893 to align
# Constraint # added constraint: constraint((T0331)Q75.CB, (T0331)Y125.CB) [> 4.1481 = 6.9135 < 8.9876] w=0.2893 to align
# Constraint # added constraint: constraint((T0331)E11.CB, (T0331)A36.CB) [> 3.4705 = 5.7842 < 7.5195] w=0.2863 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)V76.CB) [> 4.1947 = 6.9911 < 9.0885] w=0.2838 to align
# Constraint # added constraint: constraint((T0331)F95.CB, (T0331)M113.CB) [> 3.8758 = 6.4597 < 8.3976] w=0.2745 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)I67.CB) [> 4.1391 = 6.8985 < 8.9680] w=0.2730 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)Y125.CB) [> 4.1225 = 6.8708 < 8.9321] w=0.2558 to align
# Constraint # added constraint: constraint((T0331)S47.CB, (T0331)D111.CB) [> 3.1667 = 5.2778 < 6.8612] w=0.2555 to align
# Constraint # added constraint: constraint((T0331)M7.CB, (T0331)N38.CB) [> 4.0524 = 6.7540 < 8.7802] w=0.2542 to align
# Constraint # added constraint: constraint((T0331)F95.CB, (T0331)V115.CB) [> 3.7091 = 6.1818 < 8.0364] w=0.2498 to align
# Constraint # added constraint: constraint((T0331)A37.CB, (T0331)V94.CB) [> 3.9967 = 6.6611 < 8.6594] w=0.2492 to align
# Constraint # added constraint: constraint((T0331)I6.CB, (T0331)Q75.CB) [> 3.8398 = 6.3996 < 8.3195] w=0.2441 to align
# Constraint # added constraint: constraint((T0331)F44.CB, (T0331)M64.CB) [> 4.4565 = 7.4275 < 9.6557] w=0.2338 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)N98.CB) [> 3.7534 = 6.2557 < 8.1324] w=0.2331 to align
# Constraint # added constraint: constraint((T0331)V15.CB, (T0331)I67.CB) [> 4.2105 = 7.0175 < 9.1228] w=0.2295 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)A63.CB) [> 4.6859 = 7.8098 < 10.1528] w=0.2281 to align
# Constraint # added constraint: constraint((T0331)H122.CB, (T0331)I138.CB) [> 3.8944 = 6.4906 < 8.4378] w=0.2281 to align
# Constraint # added constraint: constraint((T0331)P85.CB, (T0331)Q117.CB) [> 4.6045 = 7.6742 < 9.9765] w=0.2252 to align
# Constraint # added constraint: constraint((T0331)V62.CB, (T0331)F116.CB) [> 4.3969 = 7.3282 < 9.5267] w=0.2246 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)V79.CB) [> 4.1821 = 6.9702 < 9.0613] w=0.2206 to align
# Constraint # added constraint: constraint((T0331)D22.CB, (T0331)D54.CB) [> 4.2820 = 7.1366 < 9.2776] w=0.2148 to align
# Constraint # added constraint: constraint((T0331)H122.CB, (T0331)S137.CB) [> 3.7608 = 6.2680 < 8.1484] w=0.2120 to align
# Constraint # added constraint: constraint((T0331)F124.CB, (T0331)F136.CB) [> 4.1676 = 6.9461 < 9.0299] w=0.2120 to align
# Constraint # added constraint: constraint((T0331)F124.CB, (T0331)I135.CB) [> 3.5834 = 5.9724 < 7.7641] w=0.2120 to align
# Constraint # added constraint: constraint((T0331)S47.CB, (T0331)S110.CB) [> 3.9944 = 6.6573 < 8.6545] w=0.2058 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)R30.CB) [> 4.5163 = 7.5271 < 9.7853] w=0.2017 to align
# Constraint # added constraint: constraint((T0331)M7.CB, (T0331)A36.CB) [> 4.4951 = 7.4918 < 9.7393] w=0.2007 to align
# Constraint # added constraint: constraint((T0331)R30.CB, (T0331)T50.CB) [> 4.3116 = 7.1860 < 9.3418] w=0.2002 to align
# Constraint # added constraint: constraint((T0331)Y125.CB, (T0331)F136.CB) [> 3.2756 = 5.4593 < 7.0971] w=0.1960 to align
# Constraint # added constraint: constraint((T0331)Y125.CB, (T0331)I135.CB) [> 4.3044 = 7.1740 < 9.3261] w=0.1959 to align
# Constraint # added constraint: constraint((T0331)I74.CB, (T0331)H126.CB) [> 3.3963 = 5.6604 < 7.3585] w=0.1929 to align
# Constraint # added constraint: constraint((T0331)I42.CB, (T0331)Y119.CB) [> 4.5817 = 7.6362 < 9.9271] w=0.1913 to align
# Constraint # added constraint: constraint((T0331)T35.CB, (T0331)I104.CB) [> 2.9689 = 4.9481 < 6.4325] w=0.1896 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)I34.CB) [> 4.0651 = 6.7752 < 8.8078] w=0.1891 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)A37.CB) [> 3.5313 = 5.8856 < 7.6512] w=0.1783 to align
# Constraint # added constraint: constraint((T0331)I74.CB, (T0331)L128.CB) [> 3.2196 = 5.3660 < 6.9758] w=0.1783 to align
# Constraint # added constraint: constraint((T0331)M7.CB, (T0331)E39.CB) [> 3.2759 = 5.4599 < 7.0979] w=0.1767 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)I104.CB) [> 4.1906 = 6.9844 < 9.0798] w=0.1763 to align
# Constraint # added constraint: constraint((T0331)T46.CB, (T0331)V115.CB) [> 4.2633 = 7.1054 < 9.2371] w=0.1756 to align
# Constraint # added constraint: constraint((T0331)A37.CB, (T0331)D97.CB) [> 4.1095 = 6.8492 < 8.9039] w=0.1752 to align
# Constraint # added constraint: constraint((T0331)P27.CB, (T0331)A63.CB) [> 4.5054 = 7.5091 < 9.7618] w=0.1695 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)T46.CB) [> 4.6514 = 7.7523 < 10.0780] w=0.1667 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)L73.CB) [> 3.9971 = 6.6618 < 8.6603] w=0.1654 to align
# Constraint # added constraint: constraint((T0331)H126.CB, (T0331)I135.CB) [> 3.2220 = 5.3700 < 6.9810] w=0.1638 to align
# Constraint # added constraint: constraint((T0331)G123.CA, (T0331)I138.CB) [> 3.0415 = 5.0692 < 6.5900] w=0.1638 to align
# Constraint # added constraint: constraint((T0331)G41.CA, (T0331)V79.CB) [> 4.5102 = 7.5170 < 9.7722] w=0.1630 to align
# Constraint # added constraint: constraint((T0331)V76.CB, (T0331)F124.CB) [> 4.2473 = 7.0788 < 9.2024] w=0.1622 to align
# Constraint # added constraint: constraint((T0331)Y72.CB, (T0331)S127.CB) [> 3.1865 = 5.3109 < 6.9042] w=0.1622 to align
# Constraint # added constraint: constraint((T0331)D5.CB, (T0331)Q75.CB) [> 4.2449 = 7.0749 < 9.1973] w=0.1613 to align
# Constraint # added constraint: constraint((T0331)Q75.CB, (T0331)L128.CB) [> 4.1459 = 6.9099 < 8.9829] w=0.1582 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)A63.CB) [> 4.6348 = 7.7247 < 10.0422] w=0.1582 to align
# Constraint # added constraint: constraint((T0331)T35.CB, (T0331)N98.CB) [> 3.4218 = 5.7029 < 7.4138] w=0.1578 to align
# Constraint # added constraint: constraint((T0331)F124.CB, (T0331)S137.CB) [> 2.6782 = 4.4636 < 5.8027] w=0.1478 to align
# Constraint # added constraint: constraint((T0331)F124.CB, (T0331)I138.CB) [> 4.4088 = 7.3479 < 9.5523] w=0.1478 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)L73.CB) [> 3.9437 = 6.5728 < 8.5447] w=0.1478 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)L73.CB) [> 4.0630 = 6.7716 < 8.8031] w=0.1462 to align
# Constraint # added constraint: constraint((T0331)F44.CB, (T0331)V146.CB) [> 3.4230 = 5.7050 < 7.4165] w=0.1462 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)E145.CB) [> 3.1889 = 5.3148 < 6.9092] w=0.1462 to align
# Constraint # added constraint: constraint((T0331)P85.CB, (T0331)E145.CB) [> 4.2134 = 7.0224 < 9.1291] w=0.1462 to align
# Constraint # added constraint: constraint((T0331)P85.CB, (T0331)V146.CB) [> 3.6789 = 6.1315 < 7.9710] w=0.1462 to align
# Constraint # added constraint: constraint((T0331)L91.CB, (T0331)E145.CB) [> 3.2604 = 5.4341 < 7.0643] w=0.1462 to align
# Constraint # added constraint: constraint((T0331)T65.CB, (T0331)I74.CB) [> 3.5863 = 5.9772 < 7.7704] w=0.1462 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)Q75.CB) [> 3.9980 = 6.6633 < 8.6623] w=0.1461 to align
# Constraint # added constraint: constraint((T0331)Y53.CB, (T0331)T112.CB) [> 4.6501 = 7.7502 < 10.0753] w=0.1439 to align
# Constraint # added constraint: constraint((T0331)L73.CB, (T0331)Y125.CB) [> 4.3623 = 7.2705 < 9.4517] w=0.1438 to align
# Constraint # added constraint: constraint((T0331)F43.CB, (T0331)Y101.CB) [> 3.5157 = 5.8595 < 7.6173] w=0.1431 to align
# Constraint # added constraint: constraint((T0331)H33.CB, (T0331)Y101.CB) [> 3.9703 = 6.6172 < 8.6023] w=0.1431 to align
# Constraint # added constraint: constraint((T0331)T35.CB, (T0331)H103.CB) [> 3.7003 = 6.1672 < 8.0174] w=0.1428 to align
# Constraint # added constraint: constraint((T0331)G121.CA, (T0331)G139.CA) [> 3.5224 = 5.8707 < 7.6319] w=0.1317 to align
# Constraint # added constraint: constraint((T0331)H122.CB, (T0331)G139.CA) [> 2.8691 = 4.7819 < 6.2165] w=0.1317 to align
# Constraint # added constraint: constraint((T0331)G123.CA, (T0331)G139.CA) [> 4.0577 = 6.7628 < 8.7916] w=0.1317 to align
# Constraint # added constraint: constraint((T0331)I74.CB, (T0331)S127.CB) [> 3.8953 = 6.4922 < 8.4399] w=0.1317 to align
# Constraint # added constraint: constraint((T0331)F43.CB, (T0331)A148.CB) [> 4.4034 = 7.3391 < 9.5408] w=0.1301 to align
# Constraint # added constraint: constraint((T0331)I42.CB, (T0331)R147.CB) [> 4.2219 = 7.0365 < 9.1474] w=0.1301 to align
# Constraint # added constraint: constraint((T0331)I42.CB, (T0331)A148.CB) [> 2.7780 = 4.6301 < 6.0191] w=0.1301 to align
# Constraint # added constraint: constraint((T0331)F43.CB, (T0331)E145.CB) [> 3.4662 = 5.7769 < 7.5100] w=0.1301 to align
# Constraint # added constraint: constraint((T0331)T46.CB, (T0331)V146.CB) [> 4.0757 = 6.7929 < 8.8308] w=0.1301 to align
# Constraint # added constraint: constraint((T0331)Y90.CB, (T0331)E145.CB) [> 3.6889 = 6.1482 < 7.9926] w=0.1301 to align
# Constraint # added constraint: constraint((T0331)L73.CB, (T0331)H126.CB) [> 3.6416 = 6.0692 < 7.8900] w=0.1301 to align
# Constraint # added constraint: constraint((T0331)S47.CB, (T0331)E142.CB) [> 3.3417 = 5.5694 < 7.2403] w=0.1301 to align
# Constraint # added constraint: constraint((T0331)G121.CA, (T0331)I138.CB) [> 3.9560 = 6.5932 < 8.5712] w=0.1285 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)E70.CB) [> 3.6782 = 6.1304 < 7.9695] w=0.1272 to align
# Constraint # added constraint: constraint((T0331)T35.CB, (T0331)Y100.CB) [> 2.7556 = 4.5927 < 5.9705] w=0.1271 to align
# Constraint # added constraint: constraint((T0331)H33.CB, (T0331)Y105.CB) [> 3.6848 = 6.1414 < 7.9838] w=0.1271 to align
# Constraint # added constraint: constraint((T0331)K14.CB, (T0331)Y105.CB) [> 3.8998 = 6.4997 < 8.4497] w=0.1271 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)F44.CB) [> 4.6045 = 7.6743 < 9.9765] w=0.1257 to align
# Constraint # added constraint: constraint((T0331)K92.CB, (T0331)V115.CB) [> 3.4490 = 5.7484 < 7.4729] w=0.1242 to align
# Constraint # added constraint: constraint((T0331)E80.CB, (T0331)I118.CB) [> 4.3323 = 7.2205 < 9.3867] w=0.1150 to align
# Constraint # added constraint: constraint((T0331)F95.CB, (T0331)G139.CA) [> 3.2807 = 5.4679 < 7.1082] w=0.1140 to align
# Constraint # added constraint: constraint((T0331)T82.CB, (T0331)A148.CB) [> 4.3499 = 7.2499 < 9.4248] w=0.1140 to align
# Constraint # added constraint: constraint((T0331)Y72.CB, (T0331)L128.CB) [> 3.1945 = 5.3242 < 6.9214] w=0.1140 to align
# Constraint # added constraint: constraint((T0331)Y125.CB, (T0331)S137.CB) [> 4.6636 = 7.7726 < 10.1044] w=0.1124 to align
# Constraint # added constraint: constraint((T0331)H126.CB, (T0331)F136.CB) [> 4.5269 = 7.5448 < 9.8083] w=0.1124 to align
# Constraint # added constraint: constraint((T0331)Y53.CB, (T0331)F116.CB) [> 4.1422 = 6.9037 < 8.9748] w=0.1124 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)E69.CB) [> 4.5307 = 7.5511 < 9.8164] w=0.1124 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)Y53.CB) [> 4.0812 = 6.8020 < 8.8427] w=0.1110 to align
# Constraint # added constraint: constraint((T0331)L21.CB, (T0331)L56.CB) [> 4.3000 = 7.1666 < 9.3166] w=0.1110 to align
# Constraint # added constraint: constraint((T0331)H33.CB, (T0331)I104.CB) [> 4.3330 = 7.2217 < 9.3883] w=0.1107 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)F116.CB) [> 4.6184 = 7.6973 < 10.0065] w=0.1104 to align
# Constraint # added constraint: constraint((T0331)I104.CB, (T0331)M113.CB) [> 3.7899 = 6.3164 < 8.2114] w=0.1097 to align
# Constraint # added constraint: constraint((T0331)A29.CB, (T0331)A63.CB) [> 4.5505 = 7.5841 < 9.8594] w=0.1067 to align
# Constraint # added constraint: constraint((T0331)I104.CB, (T0331)Y125.CB) [> 3.6199 = 6.0332 < 7.8432] w=0.0980 to align
# Constraint # added constraint: constraint((T0331)Y105.CB, (T0331)Y125.CB) [> 3.7409 = 6.2348 < 8.1053] w=0.0980 to align
# Constraint # added constraint: constraint((T0331)I74.CB, (T0331)Y125.CB) [> 4.3237 = 7.2062 < 9.3680] w=0.0980 to align
# Constraint # added constraint: constraint((T0331)T46.CB, (T0331)H143.CB) [> 4.4525 = 7.4208 < 9.6471] w=0.0980 to align
# Constraint # added constraint: constraint((T0331)A120.CB, (T0331)I138.CB) [> 4.3145 = 7.1909 < 9.3482] w=0.0964 to align
# Constraint # added constraint: constraint((T0331)A96.CB, (T0331)F136.CB) [> 3.9552 = 6.5920 < 8.5696] w=0.0964 to align
# Constraint # added constraint: constraint((T0331)I42.CB, (T0331)G81.CA) [> 4.7256 = 7.8759 < 10.2387] w=0.0964 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)Y125.CB) [> 4.4530 = 7.4216 < 9.6481] w=0.0964 to align
# Constraint # added constraint: constraint((T0331)H28.CB, (T0331)Y53.CB) [> 3.2858 = 5.4763 < 7.1192] w=0.0964 to align
# Constraint # added constraint: constraint((T0331)Y24.CB, (T0331)F52.CB) [> 4.1203 = 6.8672 < 8.9274] w=0.0964 to align
# Constraint # added constraint: constraint((T0331)Y72.CB, (T0331)T129.CB) [> 3.9685 = 6.6142 < 8.5985] w=0.0963 to align
# Constraint # added constraint: constraint((T0331)V77.CB, (T0331)H122.CB) [> 3.7842 = 6.3071 < 8.1992] w=0.0961 to align
# Constraint # added constraint: constraint((T0331)Y90.CB, (T0331)Q117.CB) [> 4.3582 = 7.2636 < 9.4426] w=0.0935 to align
# Constraint # added constraint: constraint((T0331)L3.CB, (T0331)Y125.CB) [> 4.1083 = 6.8471 < 8.9013] w=0.0935 to align
# Constraint # added constraint: constraint((T0331)E87.CB, (T0331)Q114.CB) [> 3.3655 = 5.6091 < 7.2918] w=0.0935 to align
# Constraint # added constraint: constraint((T0331)Y101.CB, (T0331)M113.CB) [> 3.9786 = 6.6310 < 8.6203] w=0.0922 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)H28.CB) [> 4.2975 = 7.1624 < 9.3112] w=0.0921 to align
# Constraint # added constraint: constraint((T0331)Q75.CB, (T0331)T129.CB) [> 3.9547 = 6.5912 < 8.5685] w=0.0912 to align
# Constraint # added constraint: constraint((T0331)A29.CB, (T0331)T65.CB) [> 4.7338 = 7.8896 < 10.2565] w=0.0849 to align
# Constraint # added constraint: constraint((T0331)I74.CB, (T0331)F124.CB) [> 4.6262 = 7.7104 < 10.0235] w=0.0819 to align
# Constraint # added constraint: constraint((T0331)V62.CB, (T0331)V146.CB) [> 4.7364 = 7.8939 < 10.2621] w=0.0819 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)Y125.CB) [> 4.2338 = 7.0563 < 9.1732] w=0.0803 to align
# Constraint # added constraint: constraint((T0331)I6.CB, (T0331)I138.CB) [> 2.4037 = 4.0062 < 5.2080] w=0.0803 to align
# Constraint # added constraint: constraint((T0331)D107.CB, (T0331)I138.CB) [> 4.6001 = 7.6668 < 9.9668] w=0.0803 to align
# Constraint # added constraint: constraint((T0331)H33.CB, (T0331)Y100.CB) [> 4.5352 = 7.5586 < 9.8262] w=0.0803 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)S127.CB) [> 4.1530 = 6.9216 < 8.9981] w=0.0803 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)Y125.CB) [> 3.6228 = 6.0380 < 7.8494] w=0.0803 to align
# Constraint # added constraint: constraint((T0331)Y72.CB, (T0331)H126.CB) [> 3.2829 = 5.4716 < 7.1130] w=0.0803 to align
# Constraint # added constraint: constraint((T0331)A63.CB, (T0331)V76.CB) [> 3.4515 = 5.7524 < 7.4782] w=0.0779 to align
# Constraint # added constraint: constraint((T0331)A63.CB, (T0331)V77.CB) [> 4.0017 = 6.6695 < 8.6704] w=0.0779 to align
# Constraint # added constraint: constraint((T0331)T65.CB, (T0331)Q75.CB) [> 4.4188 = 7.3647 < 9.5741] w=0.0779 to align
# Constraint # added constraint: constraint((T0331)L21.CB, (T0331)G58.CA) [> 3.9057 = 6.5095 < 8.4624] w=0.0775 to align
# Constraint # added constraint: constraint((T0331)L21.CB, (T0331)Q60.CB) [> 4.2845 = 7.1409 < 9.2832] w=0.0774 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)H33.CB) [> 4.1176 = 6.8627 < 8.9215] w=0.0768 to align
# Constraint # added constraint: constraint((T0331)K14.CB, (T0331)I67.CB) [> 2.9874 = 4.9791 < 6.4728] w=0.0753 to align
# Constraint # added constraint: constraint((T0331)F43.CB, (T0331)Y90.CB) [> 4.7549 = 7.9249 < 10.3023] w=0.0690 to align
# Constraint # added constraint: constraint((T0331)L3.CB, (T0331)M13.CB) [> 3.8711 = 6.4519 < 8.3875] w=0.0659 to align
# Constraint # added constraint: constraint((T0331)H122.CB, (T0331)Q140.CB) [> 4.2525 = 7.0874 < 9.2137] w=0.0642 to align
# Constraint # added constraint: constraint((T0331)H122.CB, (T0331)I135.CB) [> 3.7125 = 6.1875 < 8.0438] w=0.0642 to align
# Constraint # added constraint: constraint((T0331)H122.CB, (T0331)F136.CB) [> 4.0764 = 6.7940 < 8.8323] w=0.0642 to align
# Constraint # added constraint: constraint((T0331)G123.CA, (T0331)F136.CB) [> 2.9025 = 4.8375 < 6.2887] w=0.0642 to align
# Constraint # added constraint: constraint((T0331)H122.CB, (T0331)Y134.CB) [> 4.4836 = 7.4727 < 9.7146] w=0.0642 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)R30.CB) [> 4.0456 = 6.7427 < 8.7655] w=0.0639 to align
# Constraint # added constraint: constraint((T0331)F44.CB, (T0331)V94.CB) [> 4.1376 = 6.8960 < 8.9648] w=0.0628 to align
# Constraint # added constraint: constraint((T0331)L73.CB, (T0331)G131.CA) [> 3.9314 = 6.5523 < 8.5180] w=0.0628 to align
# Constraint # added constraint: constraint((T0331)T20.CB, (T0331)Q60.CB) [> 4.3985 = 7.3309 < 9.5301] w=0.0628 to align
# Constraint # added constraint: constraint((T0331)V15.CB, (T0331)T65.CB) [> 3.8347 = 6.3911 < 8.3084] w=0.0628 to align
# Constraint # added constraint: constraint((T0331)G16.CA, (T0331)A29.CB) [> 3.6019 = 6.0031 < 7.8041] w=0.0628 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)F44.CB) [> 4.1305 = 6.8842 < 8.9495] w=0.0628 to align
# Constraint # added constraint: constraint((T0331)V17.CB, (T0331)V62.CB) [> 3.5742 = 5.9570 < 7.7441] w=0.0628 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)P27.CB) [> 3.3961 = 5.6602 < 7.3583] w=0.0628 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)L56.CB) [> 3.5741 = 5.9568 < 7.7439] w=0.0628 to align
# Constraint # added constraint: constraint((T0331)V76.CB, (T0331)L128.CB) [> 4.2611 = 7.1019 < 9.2324] w=0.0619 to align
# Constraint # added constraint: constraint((T0331)E2.CB, (T0331)Y125.CB) [> 4.6159 = 7.6932 < 10.0012] w=0.0614 to align
# Constraint # added constraint: constraint((T0331)Y125.CB, (T0331)I138.CB) [> 4.2903 = 7.1505 < 9.2957] w=0.0514 to align
# Constraint # added constraint: constraint((T0331)L3.CB, (T0331)K14.CB) [> 4.4859 = 7.4766 < 9.7196] w=0.0498 to align
# Constraint # added constraint: constraint((T0331)L3.CB, (T0331)A66.CB) [> 4.6979 = 7.8298 < 10.1788] w=0.0498 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)I74.CB) [> 4.0928 = 6.8213 < 8.8677] w=0.0482 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)Q102.CB) [> 4.7669 = 7.9448 < 10.3282] w=0.0482 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)H132.CB) [> 3.9944 = 6.6574 < 8.6546] w=0.0482 to align
# Constraint # added constraint: constraint((T0331)S47.CB, (T0331)G141.CA) [> 4.0063 = 6.6772 < 8.6804] w=0.0482 to align
# Constraint # added constraint: constraint((T0331)F44.CB, (T0331)Q114.CB) [> 3.4291 = 5.7152 < 7.4298] w=0.0476 to align
# Constraint # added constraint: constraint((T0331)F44.CB, (T0331)Y101.CB) [> 4.2168 = 7.0280 < 9.1364] w=0.0468 to align
# Constraint # added constraint: constraint((T0331)F43.CB, (T0331)Q114.CB) [> 3.8841 = 6.4735 < 8.4155] w=0.0452 to align
# Constraint # added constraint: constraint((T0331)P27.CB, (T0331)R61.CB) [> 4.7516 = 7.9194 < 10.2952] w=0.0439 to align
# Constraint # added constraint: constraint((T0331)A63.CB, (T0331)I118.CB) [> 4.7502 = 7.9170 < 10.2921] w=0.0353 to align
# Constraint # added constraint: constraint((T0331)Y100.CB, (T0331)F136.CB) [> 3.1369 = 5.2282 < 6.7967] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)H103.CB, (T0331)F136.CB) [> 3.7076 = 6.1793 < 8.0331] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)L128.CB, (T0331)S137.CB) [> 3.8008 = 6.3346 < 8.2350] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)Y100.CB, (T0331)Y134.CB) [> 3.6201 = 6.0336 < 7.8436] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)R78.CB, (T0331)S137.CB) [> 4.4362 = 7.3937 < 9.6118] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)F95.CB, (T0331)F136.CB) [> 4.5950 = 7.6583 < 9.9557] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)F136.CB) [> 4.5720 = 7.6200 < 9.9060] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)A148.CB) [> 4.7684 = 7.9472 < 10.3314] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)H122.CB) [> 4.0336 = 6.7227 < 8.7395] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)L91.CB, (T0331)V146.CB) [> 3.5968 = 5.9947 < 7.7931] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)H126.CB, (T0331)S137.CB) [> 3.3612 = 5.6020 < 7.2826] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)F43.CB, (T0331)Y119.CB) [> 3.2215 = 5.3692 < 6.9800] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)F44.CB, (T0331)A120.CB) [> 4.4321 = 7.3868 < 9.6028] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)T46.CB, (T0331)I118.CB) [> 3.3965 = 5.6608 < 7.3591] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)T65.CB, (T0331)S127.CB) [> 4.5625 = 7.6042 < 9.8854] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)T93.CB, (T0331)Q117.CB) [> 2.8900 = 4.8166 < 6.2616] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)Y134.CB, (T0331)V146.CB) [> 4.3480 = 7.2467 < 9.4207] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)Y134.CB, (T0331)E145.CB) [> 4.2286 = 7.0476 < 9.1619] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)I6.CB, (T0331)F136.CB) [> 4.3211 = 7.2018 < 9.3624] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)I138.CB) [> 3.9379 = 6.5631 < 8.5321] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)H132.CB, (T0331)H143.CB) [> 3.5786 = 5.9643 < 7.7536] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)H33.CB, (T0331)Y125.CB) [> 4.1638 = 6.9397 < 9.0216] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)H33.CB, (T0331)H132.CB) [> 4.3572 = 7.2620 < 9.4406] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)M45.CB, (T0331)S137.CB) [> 4.3210 = 7.2016 < 9.3621] w=0.0321 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)Q114.CB) [> 4.6865 = 7.8108 < 10.1540] w=0.0315 to align
# Constraint # added constraint: constraint((T0331)L73.CB, (T0331)H132.CB) [> 3.9529 = 6.5881 < 8.5645] w=0.0307 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)R61.CB) [> 4.6674 = 7.7791 < 10.1128] w=0.0307 to align
# Constraint # added constraint: constraint((T0331)I9.CB, (T0331)H31.CB) [> 4.3568 = 7.2614 < 9.4398] w=0.0304 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)H31.CB) [> 3.3490 = 5.5817 < 7.2562] w=0.0304 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)H31.CB) [> 3.5054 = 5.8424 < 7.5951] w=0.0304 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)A32.CB) [> 3.6892 = 6.1487 < 7.9933] w=0.0304 to align
# Constraint # added constraint: constraint((T0331)H31.CB, (T0331)A66.CB) [> 3.8375 = 6.3959 < 8.3147] w=0.0304 to align
# Constraint # added constraint: constraint((T0331)Y101.CB, (T0331)Q114.CB) [> 3.9911 = 6.6518 < 8.6473] w=0.0292 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)G71.CA) [> 3.8955 = 6.4926 < 8.4403] w=0.0177 to align
# Constraint # added constraint: constraint((T0331)I135.CB, (T0331)E145.CB) [> 2.9878 = 4.9797 < 6.4737] w=0.0176 to align
# Constraint # added constraint: constraint((T0331)I135.CB, (T0331)V146.CB) [> 3.2568 = 5.4279 < 7.0563] w=0.0176 to align
# Constraint # added constraint: constraint((T0331)H122.CB, (T0331)K133.CB) [> 4.4317 = 7.3861 < 9.6020] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)G123.CA, (T0331)K133.CB) [> 3.7855 = 6.3092 < 8.2019] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)K133.CB, (T0331)H143.CB) [> 4.0085 = 6.6809 < 8.6851] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)Y134.CB, (T0331)H143.CB) [> 1.6748 = 2.7913 < 3.6287] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)E40.CB, (T0331)L149.CB) [> 3.1237 = 5.2061 < 6.7679] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)T82.CB, (T0331)L149.CB) [> 3.1769 = 5.2948 < 6.8832] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)A83.CB, (T0331)L149.CB) [> 4.5906 = 7.6510 < 9.9462] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)L3.CB, (T0331)V77.CB) [> 3.6994 = 6.1656 < 8.0153] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)Y101.CB, (T0331)Y134.CB) [> 4.7596 = 7.9326 < 10.3124] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)H126.CB, (T0331)G141.CA) [> 4.0348 = 6.7247 < 8.7421] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)F95.CB, (T0331)S137.CB) [> 4.2138 = 7.0230 < 9.1299] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)H122.CB) [> 4.6851 = 7.8086 < 10.1511] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)I135.CB) [> 3.2693 = 5.4489 < 7.0836] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)H126.CB, (T0331)I138.CB) [> 3.9019 = 6.5031 < 8.4541] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)K14.CB, (T0331)A32.CB) [> 4.0925 = 6.8208 < 8.8671] w=0.0161 to align
# Constraint # added constraint: constraint((T0331)M13.CB, (T0331)Q75.CB) [> 3.4657 = 5.7761 < 7.5090] w=0.0160 to align
# Constraint # added constraint: constraint((T0331)F44.CB, (T0331)Y125.CB) [> 4.5614 = 7.6023 < 9.8830] w=0.0160 to align
# Constraint # added constraint: constraint((T0331)L10.CB, (T0331)A32.CB) [> 4.6736 = 7.7893 < 10.1261] w=0.0157 to align
# Constraint # added constraint: constraint((T0331)P27.CB, (T0331)G58.CA) [> 3.0602 = 5.1003 < 6.6303] w=0.0147 to align
# Constraint # added constraint: constraint((T0331)R30.CB, (T0331)S47.CB) [> 3.4944 = 5.8240 < 7.5712] w=0.0147 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)A32.CB) [> 4.7530 = 7.9216 < 10.2981] w=0.0147 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)H31.CB) [> 3.0798 = 5.1330 < 6.6729] w=0.0147 to align
# Constraint # added constraint: constraint((T0331)F18.CB, (T0331)M45.CB) [> 4.0204 = 6.7007 < 8.7109] w=0.0147 to align
# Constraint # added constraint: constraint((T0331)H33.CB, (T0331)T46.CB) [> 4.7428 = 7.9047 < 10.2761] w=0.0147 to align
# Constraint # added constraint: constraint((T0331)A19.CB, (T0331)A83.CB) [> 4.0267 = 6.7112 < 8.7246] w=0.0146 to align
# Constraint # added constraint: constraint((T0331)L21.CB, (T0331)M57.CB) [> 4.4322 = 7.3869 < 9.6030] w=0.0146 to align
# Constraint # added constraint: constraint((T0331)N26.CB, (T0331)Y134.CB) [> 4.6812 = 7.8021 < 10.1427] w=0.0137 to align
# Constraint # added constraint: constraint((T0331)N26.CB, (T0331)I135.CB) [> 2.8268 = 4.7113 < 6.1248] w=0.0137 to align
# Constraint # added constraint: constraint((T0331)A29.CB, (T0331)L128.CB) [> 2.9637 = 4.9395 < 6.4213] w=0.0137 to align
# Constraint # added constraint: constraint((T0331)H31.CB, (T0331)M45.CB) [> 4.3204 = 7.2006 < 9.3608] w=0.0137 to align
# Constraint # added constraint: constraint((T0331)H31.CB, (T0331)Y125.CB) [> 3.1447 = 5.2412 < 6.8136] w=0.0137 to align
# Constraint # added constraint: constraint((T0331)I135.CB, (T0331)R147.CB) [> 4.6656 = 7.7760 < 10.1088] w=0.0016 to align
# SetCost created cost = 
#	( 1.0000 * align )
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/constraints_v3/T0331/
# command:# reading script from file servers-clean.under
# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0331/decoys/
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS1.pdb.gz looking for model 1
# choosing archetypes in rotamer library
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS5.pdb.gz looking for model 1
# Found a chain break before 144
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_POPULUS_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS2.pdb.gz looking for model 1
# Found a chain break before 144
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS3.pdb.gz looking for model 1
# Found a chain break before 144
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS4.pdb.gz looking for model 1
# Found a chain break before 144
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS5.pdb.gz looking for model 1
# Found a chain break before 144
# copying to AlignedFragments data structure
# naming current conformation 3D-JIGSAW_TS5
# ReadConformPDB reading from PDB file servers/3Dpro_TS1.pdb.gz looking for model 1
# Found a chain break before 4
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS1
# ReadConformPDB reading from PDB file servers/3Dpro_TS2.pdb.gz looking for model 1
# Found a chain break before 129
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS2
# ReadConformPDB reading from PDB file servers/3Dpro_TS3.pdb.gz looking for model 1
# Found a chain break before 72
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS3
# ReadConformPDB reading from PDB file servers/3Dpro_TS4.pdb.gz looking for model 1
# Found a chain break before 80
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS4
# ReadConformPDB reading from PDB file servers/3Dpro_TS5.pdb.gz looking for model 1
# Found a chain break before 70
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS5
# ReadConformPDB reading from PDB file servers/ABIpro_TS1.pdb.gz looking for model 1
# Found a chain break before 125
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS1
# ReadConformPDB reading from PDB file servers/ABIpro_TS2.pdb.gz looking for model 1
# Found a chain break before 139
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS2
# ReadConformPDB reading from PDB file servers/ABIpro_TS3.pdb.gz looking for model 1
# Found a chain break before 148
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS3
# ReadConformPDB reading from PDB file servers/ABIpro_TS4.pdb.gz looking for model 1
# Found a chain break before 135
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS4
# ReadConformPDB reading from PDB file servers/ABIpro_TS5.pdb.gz looking for model 1
# Found a chain break before 127
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS5
# ReadConformPDB reading from PDB file servers/BayesHH_TS1.pdb.gz looking for model 1
# naming current conformation BayesHH_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS1.pdb.gz looking for model 1
# Found a chain break before 135
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS2.pdb.gz looking for model 1
# Found a chain break before 103
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS2
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS3.pdb.gz looking for model 1
# Found a chain break before 134
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS3
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS4.pdb.gz looking for model 1
# Found a chain break before 140
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS4
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS5.pdb.gz looking for model 1
# Found a chain break before 137
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS5
# ReadConformPDB reading from PDB file servers/CIRCLE_TS1.pdb.gz looking for model 1
# Found a chain break before 120
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS1
# ReadConformPDB reading from PDB file servers/CIRCLE_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS2
# ReadConformPDB reading from PDB file servers/CIRCLE_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS3
# ReadConformPDB reading from PDB file servers/CIRCLE_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS4
# ReadConformPDB reading from PDB file servers/CIRCLE_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS5
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation CaspIta-FOX_TS1
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS2.pdb.gz looking for model 1
# Found a chain break before 140
# copying to AlignedFragments data structure
# naming current conformation CaspIta-FOX_TS2
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS3.pdb.gz looking for model 1
WARNING: atoms too close: (T0331)G121.C and (T0331)H122.N only 0 apart, marking (T0331)H122.N as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H122.CA only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H122.CA only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H122.CB only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H122.CB only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H122.CB only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H122.CG only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H122.CG only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H122.CG only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H122.CG only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H122.CD2 only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H122.CD2 only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H122.CD2 only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H122.CD2 only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H122.CD2 only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H122.ND1 only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H122.ND1 only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H122.ND1 only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H122.ND1 only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H122.ND1 only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H122.ND1 only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H122.CE1 only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H122.CE1 only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H122.CE1 only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H122.CE1 only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H122.CE1 only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H122.CE1 only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H122.CE1 only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H122.NE2 only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H122.NE2 only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H122.NE2 only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H122.NE2 only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H122.NE2 only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H122.NE2 only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H122.NE2 only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H122.NE2 only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H122.O only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H122.O only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H122.O only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H122.O only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H122.O only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H122.O only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H122.O only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H122.O only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H122.O only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H122.C only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H122.C only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H122.C only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H122.C only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H122.C only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H122.C only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H122.C only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H122.C only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H122.C only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H122.C only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)G123.N only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)G123.N only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)G123.N only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)G123.N only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)G123.N only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)G123.N only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)G123.N only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)G123.N only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)G123.N only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)G123.N only 0 apart, marking (T0331)H122.N as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)G123.N only 0 apart, marking (T0331)G123.N as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)G123.CA only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)G123.O only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)G123.C only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.N only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.N only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.N only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.N only 0 apart, marking (T0331)G123.N as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.N only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.N only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.N only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.N only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.N only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.N only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.N only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.N only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.N only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.N only 0 apart, marking (T0331)H122.N as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.N only 0 apart, marking (T0331)F124.N as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.CA only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.CB only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.CG only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.CD1 only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.CD2 only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.CE1 only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.CE2 only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.CZ only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.O only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)F124.C only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.N only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.N only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.N only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.N only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.N only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.N only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.N only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.N only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.N only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.N only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.N only 0 apart, marking (T0331)F124.N as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.N only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.N only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.N only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.N only 0 apart, marking (T0331)G123.N as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.N only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.N only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.N only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.N only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.N only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.N only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.N only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.N only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.N only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.N only 0 apart, marking (T0331)H122.N as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.N only 0 apart, marking (T0331)Y125.N as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.CA only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.CB only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.CG only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.CD1 only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.CD2 only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.CE1 only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.CE2 only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.CZ only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.OH only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.O only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Y125.C only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)H126.N only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)H126.N only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)H126.N only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)H126.N only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)H126.N only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)H126.N only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)H126.N only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)H126.N only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)H126.N only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)H126.N only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)H126.N only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)H126.N only 0 apart, marking (T0331)Y125.N as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)H126.N only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)H126.N only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)H126.N only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)H126.N only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)H126.N only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)H126.N only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)H126.N only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)H126.N only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)H126.N only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)H126.N only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)H126.N only 0 apart, marking (T0331)F124.N as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)H126.N only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)H126.N only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)H126.N only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)H126.N only 0 apart, marking (T0331)G123.N as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)H126.N only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H126.N only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H126.N only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H126.N only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H126.N only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H126.N only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H126.N only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H126.N only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H126.N only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H126.N only 0 apart, marking (T0331)H122.N as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H126.N only 0 apart, marking (T0331)H126.N as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H126.CA only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H126.CB only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H126.CG only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H126.CD2 only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H126.ND1 only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H126.CE1 only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H126.NE2 only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H126.O only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)H126.C only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)S127.N only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)S127.N only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)S127.N only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)S127.N only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)S127.N only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)S127.N only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)S127.N only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)S127.N only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)S127.N only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)S127.N only 0 apart, marking (T0331)H126.N as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)S127.N only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)S127.N only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)S127.N only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)S127.N only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)S127.N only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)S127.N only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)S127.N only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)S127.N only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)S127.N only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)S127.N only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)S127.N only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)S127.N only 0 apart, marking (T0331)Y125.N as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)S127.N only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)S127.N only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)S127.N only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)S127.N only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)S127.N only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)S127.N only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)S127.N only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)S127.N only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)S127.N only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)S127.N only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)S127.N only 0 apart, marking (T0331)F124.N as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)S127.N only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)S127.N only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)S127.N only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)S127.N only 0 apart, marking (T0331)G123.N as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)S127.N only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)S127.N only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)S127.N only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)S127.N only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)S127.N only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)S127.N only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)S127.N only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)S127.N only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)S127.N only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)S127.N only 0 apart, marking (T0331)H122.N as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)S127.N only 0 apart, marking (T0331)S127.N as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)S127.CA only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)S127.CB only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)S127.OG only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)S127.O only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)S127.C only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)L128.N only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)L128.N only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)L128.N only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)L128.N only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)L128.N only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)L128.N only 0 apart, marking (T0331)S127.N as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)L128.N only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)L128.N only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)L128.N only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)L128.N only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)L128.N only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)L128.N only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)L128.N only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)L128.N only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)L128.N only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)L128.N only 0 apart, marking (T0331)H126.N as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)L128.N only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)L128.N only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)L128.N only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)L128.N only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)L128.N only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)L128.N only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)L128.N only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)L128.N only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)L128.N only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)L128.N only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)L128.N only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)L128.N only 0 apart, marking (T0331)Y125.N as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)L128.N only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)L128.N only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)L128.N only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)L128.N only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)L128.N only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)L128.N only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)L128.N only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)L128.N only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)L128.N only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)L128.N only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)L128.N only 0 apart, marking (T0331)F124.N as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)L128.N only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)L128.N only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)L128.N only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)L128.N only 0 apart, marking (T0331)G123.N as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)L128.N only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)L128.N only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)L128.N only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)L128.N only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)L128.N only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)L128.N only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)L128.N only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)L128.N only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)L128.N only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)L128.N only 0 apart, marking (T0331)H122.N as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)L128.N only 0 apart, marking (T0331)L128.N as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)L128.CA only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)L128.CB only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)L128.CG only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)L128.CD1 only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)L128.CD2 only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)L128.O only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)L128.C only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)T129.N only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)T129.N only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)T129.N only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)T129.N only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)T129.N only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)T129.N only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)T129.N only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)T129.N only 0 apart, marking (T0331)L128.N as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)T129.N only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)T129.N only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)T129.N only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)T129.N only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)T129.N only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)T129.N only 0 apart, marking (T0331)S127.N as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)T129.N only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)T129.N only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)T129.N only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)T129.N only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)T129.N only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)T129.N only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)T129.N only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)T129.N only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)T129.N only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)T129.N only 0 apart, marking (T0331)H126.N as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)T129.N only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)T129.N only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)T129.N only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)T129.N only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)T129.N only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)T129.N only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)T129.N only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)T129.N only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)T129.N only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)T129.N only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)T129.N only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)T129.N only 0 apart, marking (T0331)Y125.N as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)T129.N only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)T129.N only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)T129.N only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)T129.N only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)T129.N only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)T129.N only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)T129.N only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)T129.N only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)T129.N only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)T129.N only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)T129.N only 0 apart, marking (T0331)F124.N as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)T129.N only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)T129.N only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)T129.N only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)T129.N only 0 apart, marking (T0331)G123.N as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)T129.N only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)T129.N only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)T129.N only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)T129.N only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)T129.N only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)T129.N only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)T129.N only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)T129.N only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)T129.N only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)T129.N only 0 apart, marking (T0331)H122.N as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)T129.N only 0 apart, marking (T0331)T129.N as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)T129.CA only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)T129.CB only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)T129.CG2 only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)T129.OG1 only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)T129.O only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)T129.C only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)Q130.N only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)Q130.N only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)Q130.N only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)Q130.N only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)Q130.N only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)Q130.N only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)Q130.N only 0 apart, marking (T0331)T129.N as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)Q130.N only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)Q130.N only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)Q130.N only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)Q130.N only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)Q130.N only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)Q130.N only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)Q130.N only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)Q130.N only 0 apart, marking (T0331)L128.N as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)Q130.N only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)Q130.N only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)Q130.N only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)Q130.N only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)Q130.N only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)Q130.N only 0 apart, marking (T0331)S127.N as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)Q130.N only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)Q130.N only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)Q130.N only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)Q130.N only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)Q130.N only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)Q130.N only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)Q130.N only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)Q130.N only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)Q130.N only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)Q130.N only 0 apart, marking (T0331)H126.N as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)Q130.N only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)Q130.N only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Q130.N only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Q130.N only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Q130.N only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Q130.N only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Q130.N only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Q130.N only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Q130.N only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Q130.N only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Q130.N only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Q130.N only 0 apart, marking (T0331)Y125.N as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Q130.N only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Q130.N only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Q130.N only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Q130.N only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Q130.N only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Q130.N only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Q130.N only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Q130.N only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Q130.N only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Q130.N only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Q130.N only 0 apart, marking (T0331)F124.N as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Q130.N only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Q130.N only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Q130.N only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Q130.N only 0 apart, marking (T0331)G123.N as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Q130.N only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Q130.N only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Q130.N only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Q130.N only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Q130.N only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Q130.N only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Q130.N only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Q130.N only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Q130.N only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Q130.N only 0 apart, marking (T0331)H122.N as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Q130.N only 0 apart, marking (T0331)Q130.N as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Q130.CA only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Q130.CB only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Q130.CB and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Q130.CG only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Q130.CG and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Q130.CB and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Q130.CD only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Q130.CD and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Q130.CG and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Q130.CB and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Q130.OE1 only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Q130.OE1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Q130.CD and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Q130.CG and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Q130.CB and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Q130.NE2 only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Q130.NE2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Q130.OE1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Q130.CD and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Q130.CG and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Q130.CB and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Q130.O only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Q130.O and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Q130.NE2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Q130.OE1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Q130.CD and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Q130.CG and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Q130.CB and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)Q130.C only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Q130.C and (T0331)G131.N only 0 apart, marking (T0331)Q130.C as missing
WARNING: atoms too close: (T0331)Q130.O and (T0331)G131.N only 0 apart, marking (T0331)Q130.O as missing
WARNING: atoms too close: (T0331)Q130.NE2 and (T0331)G131.N only 0 apart, marking (T0331)Q130.NE2 as missing
WARNING: atoms too close: (T0331)Q130.OE1 and (T0331)G131.N only 0 apart, marking (T0331)Q130.OE1 as missing
WARNING: atoms too close: (T0331)Q130.CD and (T0331)G131.N only 0 apart, marking (T0331)Q130.CD as missing
WARNING: atoms too close: (T0331)Q130.CG and (T0331)G131.N only 0 apart, marking (T0331)Q130.CG as missing
WARNING: atoms too close: (T0331)Q130.CB and (T0331)G131.N only 0 apart, marking (T0331)Q130.CB as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)G131.N only 0 apart, marking (T0331)Q130.CA as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)G131.N only 0 apart, marking (T0331)Q130.N as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)G131.N only 0 apart, marking (T0331)T129.C as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)G131.N only 0 apart, marking (T0331)T129.O as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)G131.N only 0 apart, marking (T0331)T129.OG1 as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)G131.N only 0 apart, marking (T0331)T129.CG2 as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)G131.N only 0 apart, marking (T0331)T129.CB as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)G131.N only 0 apart, marking (T0331)T129.CA as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)G131.N only 0 apart, marking (T0331)T129.N as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)G131.N only 0 apart, marking (T0331)L128.C as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)G131.N only 0 apart, marking (T0331)L128.O as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)G131.N only 0 apart, marking (T0331)L128.CD2 as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)G131.N only 0 apart, marking (T0331)L128.CD1 as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)G131.N only 0 apart, marking (T0331)L128.CG as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)G131.N only 0 apart, marking (T0331)L128.CB as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)G131.N only 0 apart, marking (T0331)L128.CA as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)G131.N only 0 apart, marking (T0331)L128.N as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)G131.N only 0 apart, marking (T0331)S127.C as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)G131.N only 0 apart, marking (T0331)S127.O as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)G131.N only 0 apart, marking (T0331)S127.OG as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)G131.N only 0 apart, marking (T0331)S127.CB as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)G131.N only 0 apart, marking (T0331)S127.CA as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)G131.N only 0 apart, marking (T0331)S127.N as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)G131.N only 0 apart, marking (T0331)H126.C as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)G131.N only 0 apart, marking (T0331)H126.O as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)G131.N only 0 apart, marking (T0331)H126.NE2 as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)G131.N only 0 apart, marking (T0331)H126.CE1 as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)G131.N only 0 apart, marking (T0331)H126.ND1 as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)G131.N only 0 apart, marking (T0331)H126.CD2 as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)G131.N only 0 apart, marking (T0331)H126.CG as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)G131.N only 0 apart, marking (T0331)H126.CB as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)G131.N only 0 apart, marking (T0331)H126.CA as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)G131.N only 0 apart, marking (T0331)H126.N as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)G131.N only 0 apart, marking (T0331)Y125.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)G131.N only 0 apart, marking (T0331)Y125.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)G131.N only 0 apart, marking (T0331)Y125.OH as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)G131.N only 0 apart, marking (T0331)Y125.CZ as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)G131.N only 0 apart, marking (T0331)Y125.CE2 as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)G131.N only 0 apart, marking (T0331)Y125.CE1 as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)G131.N only 0 apart, marking (T0331)Y125.CD2 as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)G131.N only 0 apart, marking (T0331)Y125.CD1 as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)G131.N only 0 apart, marking (T0331)Y125.CG as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)G131.N only 0 apart, marking (T0331)Y125.CB as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)G131.N only 0 apart, marking (T0331)Y125.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)G131.N only 0 apart, marking (T0331)Y125.N as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)G131.N only 0 apart, marking (T0331)F124.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)G131.N only 0 apart, marking (T0331)F124.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)G131.N only 0 apart, marking (T0331)F124.CZ as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)G131.N only 0 apart, marking (T0331)F124.CE2 as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)G131.N only 0 apart, marking (T0331)F124.CE1 as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)G131.N only 0 apart, marking (T0331)F124.CD2 as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)G131.N only 0 apart, marking (T0331)F124.CD1 as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)G131.N only 0 apart, marking (T0331)F124.CG as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)G131.N only 0 apart, marking (T0331)F124.CB as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)G131.N only 0 apart, marking (T0331)F124.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)G131.N only 0 apart, marking (T0331)F124.N as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)G131.N only 0 apart, marking (T0331)G123.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)G131.N only 0 apart, marking (T0331)G123.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)G131.N only 0 apart, marking (T0331)G123.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)G131.N only 0 apart, marking (T0331)G123.N as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)G131.N only 0 apart, marking (T0331)H122.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)G131.N only 0 apart, marking (T0331)H122.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)G131.N only 0 apart, marking (T0331)H122.NE2 as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)G131.N only 0 apart, marking (T0331)H122.CE1 as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)G131.N only 0 apart, marking (T0331)H122.ND1 as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)G131.N only 0 apart, marking (T0331)H122.CD2 as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)G131.N only 0 apart, marking (T0331)H122.CG as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)G131.N only 0 apart, marking (T0331)H122.CB as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)G131.N only 0 apart, marking (T0331)H122.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)G131.N only 0 apart, marking (T0331)H122.N as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)G131.N only 0 apart, marking (T0331)G131.N as missing
WARNING: atoms too close: (T0331)G131.N and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Q130.C and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Q130.O and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Q130.NE2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Q130.OE1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Q130.CD and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Q130.CG and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Q130.CB and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)G131.CA only 0 apart, marking (T0331)G131.CA as missing
WARNING: atoms too close: (T0331)G131.CA and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)G131.N and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Q130.C and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Q130.O and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Q130.NE2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Q130.OE1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Q130.CD and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Q130.CG and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Q130.CB and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)G131.O only 0 apart, marking (T0331)G131.O as missing
WARNING: atoms too close: (T0331)G131.O and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)G131.CA and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)G131.N and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Q130.C and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Q130.O and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Q130.NE2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Q130.OE1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Q130.CD and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Q130.CG and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Q130.CB and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Q130.CA and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Q130.N and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)T129.C and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)T129.O and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)T129.OG1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)T129.CG2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)T129.CB and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)T129.CA and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)T129.N and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)L128.C and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)L128.O and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)L128.CD2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)L128.CD1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)L128.CG and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)L128.CB and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)L128.CA and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)L128.N and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)S127.C and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)S127.O and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)S127.OG and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)S127.CB and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)S127.CA and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)S127.N and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H126.C and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H126.O and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H126.NE2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H126.CE1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H126.ND1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H126.CD2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H126.CG and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H126.CB and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H126.CA and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H126.N and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.C and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.O and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.OH and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.CZ and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.CE2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.CE1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.CD2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.CD1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.CG and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.CB and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.CA and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)Y125.N and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.C and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.O and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.CZ and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.CE2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.CE1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.CD2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.CD1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.CG and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.CB and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.CA and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)F124.N and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)G123.C and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)G123.O and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)G123.CA and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)G123.N and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H122.C and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H122.O and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H122.NE2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H122.CE1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H122.ND1 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H122.CD2 and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H122.CG and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H122.CB and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H122.CA and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)H122.N and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
WARNING: atoms too close: (T0331)G121.C and (T0331)G131.C only 0 apart, marking (T0331)G131.C as missing
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS3
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS4
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS5.pdb.gz looking for model 1
# Found a chain break before 144
# copying to AlignedFragments data structure
# naming current conformation CaspIta-FOX_TS5
# ReadConformPDB reading from PDB file servers/Distill_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Distill_TS1
# ReadConformPDB reading from PDB file servers/Distill_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Distill_TS2
# ReadConformPDB reading from PDB file servers/Distill_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Distill_TS3
# ReadConformPDB reading from PDB file servers/Distill_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Distill_TS4
# ReadConformPDB reading from PDB file servers/Distill_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Distill_TS5
# ReadConformPDB reading from PDB file servers/FAMSD_TS1.pdb.gz looking for model 1
# Found a chain break before 147
# copying to AlignedFragments data structure
# naming current conformation FAMSD_TS1
# ReadConformPDB reading from PDB file servers/FAMSD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS2
# ReadConformPDB reading from PDB file servers/FAMSD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS3
# ReadConformPDB reading from PDB file servers/FAMSD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS4
# ReadConformPDB reading from PDB file servers/FAMSD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS5
# ReadConformPDB reading from PDB file servers/FAMS_TS1.pdb.gz looking for model 1
# Found a chain break before 134
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS1
# ReadConformPDB reading from PDB file servers/FAMS_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FAMS_TS2
# ReadConformPDB reading from PDB file servers/FAMS_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FAMS_TS3
# ReadConformPDB reading from PDB file servers/FAMS_TS4.pdb.gz looking for model 1
# Found a chain break before 120
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS4
# ReadConformPDB reading from PDB file servers/FAMS_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FAMS_TS5
# ReadConformPDB reading from PDB file servers/FOLDpro_TS1.pdb.gz looking for model 1
# Found a chain break before 4
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS1
# ReadConformPDB reading from PDB file servers/FOLDpro_TS2.pdb.gz looking for model 1
# Found a chain break before 135
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS2
# ReadConformPDB reading from PDB file servers/FOLDpro_TS3.pdb.gz looking for model 1
# Found a chain break before 72
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS3
# ReadConformPDB reading from PDB file servers/FOLDpro_TS4.pdb.gz looking for model 1
# Found a chain break before 75
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS4
# ReadConformPDB reading from PDB file servers/FOLDpro_TS5.pdb.gz looking for model 1
# Found a chain break before 80
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS5
# ReadConformPDB reading from PDB file servers/FORTE1_AL1.pdb.gz looking for model 1
Skipped atom 54, because occupancy 1 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 56, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 58, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 60, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 306, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 308, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 310, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 312, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 362, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 364, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 366, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 368, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 478, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 480, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 482, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
Skipped atom 484, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL1.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL1
# ReadConformPDB reading from PDB file servers/FORTE1_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FORTE1_AL2
# ReadConformPDB reading from PDB file servers/FORTE1_AL3.pdb.gz looking for model 1
Skipped atom 110, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL3.pdb.gz
Skipped atom 112, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL3.pdb.gz
Skipped atom 114, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL3.pdb.gz
Skipped atom 116, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL3.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL3
# ReadConformPDB reading from PDB file servers/FORTE1_AL4.pdb.gz looking for model 1
Skipped atom 142, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz
Skipped atom 144, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz
Skipped atom 146, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz
Skipped atom 148, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz
Skipped atom 295, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz
Skipped atom 312, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz
Skipped atom 321, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL4
# ReadConformPDB reading from PDB file servers/FORTE1_AL5.pdb.gz looking for model 1
Skipped atom 173, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz
Skipped atom 510, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL5.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL5
# ReadConformPDB reading from PDB file servers/FORTE2_AL1.pdb.gz looking for model 1
Skipped atom 54, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 56, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 58, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 60, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 306, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 308, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 310, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 312, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 362, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 364, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 366, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 368, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 478, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 480, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 482, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
Skipped atom 484, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL1.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL1
# ReadConformPDB reading from PDB file servers/FORTE2_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FORTE2_AL2
# ReadConformPDB reading from PDB file servers/FORTE2_AL3.pdb.gz looking for model 1
Skipped atom 110, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL3.pdb.gz
Skipped atom 112, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL3.pdb.gz
Skipped atom 114, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL3.pdb.gz
Skipped atom 116, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL3.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL3
# ReadConformPDB reading from PDB file servers/FORTE2_AL4.pdb.gz looking for model 1
Skipped atom 142, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz
Skipped atom 144, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz
Skipped atom 146, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz
Skipped atom 148, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz
Skipped atom 295, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz
Skipped atom 312, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz
Skipped atom 321, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL4
# ReadConformPDB reading from PDB file servers/FORTE2_AL5.pdb.gz looking for model 1
Skipped atom 173, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL5.pdb.gz
Skipped atom 510, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL5.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL5
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS1.pdb.gz looking for model 1
# Found a chain break before 144
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS1
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS2.pdb.gz looking for model 1
# Found a chain break before 120
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS2
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS3.pdb.gz looking for model 1
# Found a chain break before 148
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS3
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS4.pdb.gz looking for model 1
# Found a chain break before 103
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS4
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS5.pdb.gz looking for model 1
# Found a chain break before 146
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS5
# ReadConformPDB reading from PDB file servers/FUGMOD_TS1.pdb.gz looking for model 1
# naming current conformation FUGMOD_TS1
# ReadConformPDB reading from PDB file servers/FUGMOD_TS2.pdb.gz looking for model 1
# Found a chain break before 129
# copying to AlignedFragments data structure
# naming current conformation FUGMOD_TS2
# ReadConformPDB reading from PDB file servers/FUGMOD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS3
# ReadConformPDB reading from PDB file servers/FUGMOD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS4
# ReadConformPDB reading from PDB file servers/FUGMOD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS5
# ReadConformPDB reading from PDB file servers/FUGUE_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FUGUE_AL1
# ReadConformPDB reading from PDB file servers/FUGUE_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FUGUE_AL2
# ReadConformPDB reading from PDB file servers/FUGUE_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL3
# ReadConformPDB reading from PDB file servers/FUGUE_AL4.pdb.gz looking for model 1
Skipped atom 142, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL4.pdb.gz
Skipped atom 144, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL4.pdb.gz
Skipped atom 146, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL4.pdb.gz
Skipped atom 148, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL4.pdb.gz
Skipped atom 295, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL4.pdb.gz
Skipped atom 312, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL4.pdb.gz
Skipped atom 321, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL4.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL4
# ReadConformPDB reading from PDB file servers/FUGUE_AL5.pdb.gz looking for model 1
Skipped atom 110, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 112, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 114, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
Skipped atom 116, because occupancy 1.000 <= existing 1.000 in servers/FUGUE_AL5.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL5
# ReadConformPDB reading from PDB file servers/FUNCTION_TS1.pdb.gz looking for model 1
# Found a chain break before 139
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS1
# ReadConformPDB reading from PDB file servers/FUNCTION_TS2.pdb.gz looking for model 1
# Found a chain break before 142
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS2
# ReadConformPDB reading from PDB file servers/FUNCTION_TS3.pdb.gz looking for model 1
# Found a chain break before 139
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS3
# ReadConformPDB reading from PDB file servers/FUNCTION_TS4.pdb.gz looking for model 1
# Found a chain break before 143
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS4
# ReadConformPDB reading from PDB file servers/FUNCTION_TS5.pdb.gz looking for model 1
# Found a chain break before 148
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS5
# ReadConformPDB reading from PDB file servers/Frankenstein_TS1.pdb.gz looking for model 1
# naming current conformation Frankenstein_TS1
# ReadConformPDB reading from PDB file servers/Frankenstein_TS2.pdb.gz looking for model 1
# Found a chain break before 121
# copying to AlignedFragments data structure
# naming current conformation Frankenstein_TS2
# ReadConformPDB reading from PDB file servers/Frankenstein_TS3.pdb.gz looking for model 1
# Found a chain break before 137
# copying to AlignedFragments data structure
# naming current conformation Frankenstein_TS3
# ReadConformPDB reading from PDB file servers/Frankenstein_TS4.pdb.gz looking for model 1
# Found a chain break before 95
# copying to AlignedFragments data structure
# naming current conformation Frankenstein_TS4
# ReadConformPDB reading from PDB file servers/Frankenstein_TS5.pdb.gz looking for model 1
# Found a chain break before 95
# copying to AlignedFragments data structure
# naming current conformation Frankenstein_TS5
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS1.pdb.gz looking for model 1
# Found a chain break before 8
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS1
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS2.pdb.gz looking for model 1
# Found a chain break before 118
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS2
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS4.pdb.gz looking for model 1
# Found a chain break before 147
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS4
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation GeneSilicoMetaServer_TS5
# ReadConformPDB reading from PDB file servers/HHpred1_TS1.pdb.gz looking for model 1
# naming current conformation HHpred1_TS1
# ReadConformPDB reading from PDB file servers/HHpred2_TS1.pdb.gz looking for model 1
# naming current conformation HHpred2_TS1
# ReadConformPDB reading from PDB file servers/HHpred3_TS1.pdb.gz looking for model 1
# naming current conformation HHpred3_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS2
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS3
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Huber-Torda-Server_TS4
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Huber-Torda-Server_TS5
# ReadConformPDB reading from PDB file servers/LOOPP_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS1
# ReadConformPDB reading from PDB file servers/LOOPP_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS2
# ReadConformPDB reading from PDB file servers/LOOPP_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS3
# ReadConformPDB reading from PDB file servers/LOOPP_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS4
# ReadConformPDB reading from PDB file servers/LOOPP_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS5
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS1.pdb.gz looking for model 1
# Found a chain break before 94
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server2_TS1
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS2.pdb.gz looking for model 1
# Found a chain break before 116
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server2_TS2
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS3.pdb.gz looking for model 1
# Found a chain break before 40
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server2_TS3
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS4.pdb.gz looking for model 1
# Found a chain break before 63
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server2_TS4
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server2_TS5.pdb.gz looking for model 1
# naming current conformation Ma-OPUS-server2_TS5
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS1.pdb.gz looking for model 1
# naming current conformation Ma-OPUS-server_TS1
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS2.pdb.gz looking for model 1
# naming current conformation Ma-OPUS-server_TS2
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS3.pdb.gz looking for model 1
# Found a chain break before 34
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS3
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS4.pdb.gz looking for model 1
# Found a chain break before 89
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS4
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS5.pdb.gz looking for model 1
# naming current conformation Ma-OPUS-server_TS5
# ReadConformPDB reading from PDB file servers/MetaTasser_TS1.pdb.gz looking for model 1
# Found a chain break before 146
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS1
# ReadConformPDB reading from PDB file servers/MetaTasser_TS2.pdb.gz looking for model 1
# Found a chain break before 148
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS2
# ReadConformPDB reading from PDB file servers/MetaTasser_TS3.pdb.gz looking for model 1
# Found a chain break before 146
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS3
# ReadConformPDB reading from PDB file servers/MetaTasser_TS4.pdb.gz looking for model 1
# Found a chain break before 148
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS4
# ReadConformPDB reading from PDB file servers/MetaTasser_TS5.pdb.gz looking for model 1
# Found a chain break before 142
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS5
# ReadConformPDB reading from PDB file servers/NN_PUT_lab_TS1.pdb.gz looking for model 1
# naming current conformation NN_PUT_lab_TS1
# ReadConformPDB reading from PDB file servers/POMYSL_TS1.pdb.gz looking for model 1
# Found a chain break before 143
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS1
# ReadConformPDB reading from PDB file servers/POMYSL_TS2.pdb.gz looking for model 1
# Found a chain break before 137
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS2
# ReadConformPDB reading from PDB file servers/POMYSL_TS3.pdb.gz looking for model 1
# Found a chain break before 135
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS3
# ReadConformPDB reading from PDB file servers/POMYSL_TS4.pdb.gz looking for model 1
WARNING: atom 1 has residue number 82  < previous residue 149  in servers/POMYSL_TS4.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation POMYSL_TS4
# ReadConformPDB reading from PDB file servers/POMYSL_TS5.pdb.gz looking for model 1
# Found a chain break before 135
# copying to AlignedFragments data structure
# naming current conformation POMYSL_TS5
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS1.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS2.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS3.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS4.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS5.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS5
# ReadConformPDB reading from PDB file servers/PROTINFO_TS1.pdb.gz looking for model 1
# Found a chain break before 71
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO_TS2.pdb.gz looking for model 1
# Found a chain break before 139
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO_TS3.pdb.gz looking for model 1
# naming current conformation PROTINFO_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO_TS4.pdb.gz looking for model 1
# Found a chain break before 124
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO_TS5.pdb.gz looking for model 1
# Found a chain break before 142
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS5
# ReadConformPDB reading from PDB file servers/Pcons6_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS1
# ReadConformPDB reading from PDB file servers/Pcons6_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS2
# ReadConformPDB reading from PDB file servers/Pcons6_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS3
# ReadConformPDB reading from PDB file servers/Pcons6_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS4
# ReadConformPDB reading from PDB file servers/Pcons6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS5
# ReadConformPDB reading from PDB file servers/Phyre-1_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Phyre-1_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS1.pdb.gz looking for model 1
# Found a chain break before 141
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS2
# ReadConformPDB reading from PDB file servers/Phyre-2_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS3
# ReadConformPDB reading from PDB file servers/Phyre-2_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS4
# ReadConformPDB reading from PDB file servers/Phyre-2_TS5.pdb.gz looking for model 1
# Found a chain break before 126
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS5
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS1.pdb.gz looking for model 1
# Found a chain break before 140
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS1
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS2.pdb.gz looking for model 1
# Found a chain break before 138
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS2
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS3.pdb.gz looking for model 1
# Found a chain break before 137
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS3
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS4.pdb.gz looking for model 1
# naming current conformation Pmodeller6_TS4
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS1.pdb.gz looking for model 1
# naming current conformation RAPTOR-ACE_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS2.pdb.gz looking for model 1
# naming current conformation RAPTOR-ACE_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS3.pdb.gz looking for model 1
# naming current conformation RAPTOR-ACE_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS4.pdb.gz looking for model 1
# naming current conformation RAPTOR-ACE_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS5.pdb.gz looking for model 1
# naming current conformation RAPTOR-ACE_TS5
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS1.pdb.gz looking for model 1
# naming current conformation RAPTORESS_TS1
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS2.pdb.gz looking for model 1
# Found a chain break before 148
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS2
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS3.pdb.gz looking for model 1
# Found a chain break before 72
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS3
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS4.pdb.gz looking for model 1
# Found a chain break before 145
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS4
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS5.pdb.gz looking for model 1
# naming current conformation RAPTORESS_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR_TS1.pdb.gz looking for model 1
# naming current conformation RAPTOR_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR_TS2.pdb.gz looking for model 1
# naming current conformation RAPTOR_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR_TS3.pdb.gz looking for model 1
# Found a chain break before 119
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR_TS4.pdb.gz looking for model 1
# Found a chain break before 97
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR_TS5.pdb.gz looking for model 1
# naming current conformation RAPTOR_TS5
# ReadConformPDB reading from PDB file servers/ROBETTA_TS1.pdb.gz looking for model 1
# Found a chain break before 140
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS1
# ReadConformPDB reading from PDB file servers/ROBETTA_TS2.pdb.gz looking for model 1
# Found a chain break before 139
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS2
# ReadConformPDB reading from PDB file servers/ROBETTA_TS3.pdb.gz looking for model 1
# Found a chain break before 137
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS3
# ReadConformPDB reading from PDB file servers/ROBETTA_TS4.pdb.gz looking for model 1
# Found a chain break before 138
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS4
# ReadConformPDB reading from PDB file servers/ROBETTA_TS5.pdb.gz looking for model 1
# naming current conformation ROBETTA_TS5
# ReadConformPDB reading from PDB file servers/ROKKY_TS1.pdb.gz looking for model 1
# Found a chain break before 64
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS1
# ReadConformPDB reading from PDB file servers/ROKKY_TS2.pdb.gz looking for model 1
# Found a chain break before 133
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS2
# ReadConformPDB reading from PDB file servers/ROKKY_TS3.pdb.gz looking for model 1
# Found a chain break before 122
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS3
# ReadConformPDB reading from PDB file servers/ROKKY_TS4.pdb.gz looking for model 1
# naming current conformation ROKKY_TS4
# ReadConformPDB reading from PDB file servers/ROKKY_TS5.pdb.gz looking for model 1
# naming current conformation ROKKY_TS5
# ReadConformPDB reading from PDB file servers/SAM-T02_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM-T02_AL1
# ReadConformPDB reading from PDB file servers/SAM-T02_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM-T02_AL2
# ReadConformPDB reading from PDB file servers/SAM-T02_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM-T02_AL3
# ReadConformPDB reading from PDB file servers/SAM-T02_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM-T02_AL4
# ReadConformPDB reading from PDB file servers/SAM-T02_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation SAM-T02_AL5
# ReadConformPDB reading from PDB file servers/SAM-T99_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL1
# ReadConformPDB reading from PDB file servers/SAM-T99_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL2
# ReadConformPDB reading from PDB file servers/SAM-T99_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL3
# ReadConformPDB reading from PDB file servers/SAM-T99_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL4
# ReadConformPDB reading from PDB file servers/SAM-T99_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL5
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS1.pdb.gz looking for model 1
# Found a chain break before 140
# copying to AlignedFragments data structure
# naming current conformation SAM_T06_server_TS1
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS2
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS3
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS4
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS5
# ReadConformPDB reading from PDB file servers/SP3_TS1.pdb.gz looking for model 1
# naming current conformation SP3_TS1
# ReadConformPDB reading from PDB file servers/SP3_TS2.pdb.gz looking for model 1
# naming current conformation SP3_TS2
# ReadConformPDB reading from PDB file servers/SP3_TS3.pdb.gz looking for model 1
# Found a chain break before 132
# copying to AlignedFragments data structure
# naming current conformation SP3_TS3
# ReadConformPDB reading from PDB file servers/SP3_TS4.pdb.gz looking for model 1
# Found a chain break before 145
# copying to AlignedFragments data structure
# naming current conformation SP3_TS4
# ReadConformPDB reading from PDB file servers/SP3_TS5.pdb.gz looking for model 1
# Found a chain break before 110
# copying to AlignedFragments data structure
# naming current conformation SP3_TS5
# ReadConformPDB reading from PDB file servers/SP4_TS1.pdb.gz looking for model 1
# naming current conformation SP4_TS1
# ReadConformPDB reading from PDB file servers/SP4_TS2.pdb.gz looking for model 1
# Found a chain break before 2
# copying to AlignedFragments data structure
# naming current conformation SP4_TS2
# ReadConformPDB reading from PDB file servers/SP4_TS3.pdb.gz looking for model 1
# Found a chain break before 128
# copying to AlignedFragments data structure
# naming current conformation SP4_TS3
# ReadConformPDB reading from PDB file servers/SP4_TS4.pdb.gz looking for model 1
# Found a chain break before 32
# copying to AlignedFragments data structure
# naming current conformation SP4_TS4
# ReadConformPDB reading from PDB file servers/SP4_TS5.pdb.gz looking for model 1
# Found a chain break before 78
# copying to AlignedFragments data structure
# naming current conformation SP4_TS5
# ReadConformPDB reading from PDB file servers/SPARKS2_TS1.pdb.gz looking for model 1
# Found a chain break before 133
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS1
# ReadConformPDB reading from PDB file servers/SPARKS2_TS2.pdb.gz looking for model 1
# naming current conformation SPARKS2_TS2
# ReadConformPDB reading from PDB file servers/SPARKS2_TS3.pdb.gz looking for model 1
# Found a chain break before 99
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS3
# ReadConformPDB reading from PDB file servers/SPARKS2_TS4.pdb.gz looking for model 1
# Found a chain break before 82
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS4
# ReadConformPDB reading from PDB file servers/SPARKS2_TS5.pdb.gz looking for model 1
# Found a chain break before 32
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS5
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS2
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS3
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS4
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS5
# ReadConformPDB reading from PDB file servers/UNI-EID_expm_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_expm_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL2
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL3
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL4
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL5
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS1.pdb.gz looking for model 1
# Found a chain break before 131
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS1
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS2.pdb.gz looking for model 1
# Found a chain break before 135
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS2
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS3.pdb.gz looking for model 1
# Found a chain break before 145
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS3
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS4.pdb.gz looking for model 1
# Found a chain break before 134
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS4
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS5.pdb.gz looking for model 1
# Found a chain break before 73
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS5
# ReadConformPDB reading from PDB file servers/beautshot_TS1.pdb.gz looking for model 1
# Found a chain break before 148
# copying to AlignedFragments data structure
# naming current conformation beautshot_TS1
# ReadConformPDB reading from PDB file servers/beautshotbase_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation beautshotbase_TS1
# ReadConformPDB reading from PDB file servers/forecast-s_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation forecast-s_AL1
# ReadConformPDB reading from PDB file servers/forecast-s_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL2
# ReadConformPDB reading from PDB file servers/forecast-s_AL3.pdb.gz looking for model 1
Skipped atom 121, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 122, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 123, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 124, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 505, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 506, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 507, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 508, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 513, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 514, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 515, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 516, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 521, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 522, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 523, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 524, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 529, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 530, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 531, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 532, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 537, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 538, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 539, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 540, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 545, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 546, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 547, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 548, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 553, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 554, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 555, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 556, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 561, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 562, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 563, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 564, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 569, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 570, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 571, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 572, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 577, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 578, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 579, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 580, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 585, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 586, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 587, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 588, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 593, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 594, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 595, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 596, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 601, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 602, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 603, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
Skipped atom 604, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation forecast-s_AL3
# ReadConformPDB reading from PDB file servers/forecast-s_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL4
# ReadConformPDB reading from PDB file servers/forecast-s_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL5
# ReadConformPDB reading from PDB file servers/gtg_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation gtg_AL1
# ReadConformPDB reading from PDB file servers/gtg_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation gtg_AL2
# ReadConformPDB reading from PDB file servers/gtg_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation gtg_AL3
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS1.pdb.gz looking for model 1
# Found a chain break before 114
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS2.pdb.gz looking for model 1
# Found a chain break before 114
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS3.pdb.gz looking for model 1
# Found a chain break before 14
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS4.pdb.gz looking for model 1
# Found a chain break before 141
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS5.pdb.gz looking for model 1
# Found a chain break before 111
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS5
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS1.pdb.gz looking for model 1
WARNING: atoms too close: (T0331)T46.O and (T0331)S47.N only 0.000 apart, marking (T0331)S47.N as missing
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS2.pdb.gz looking for model 1
# Found a chain break before 146
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS3.pdb.gz looking for model 1
WARNING: atoms too close: (T0331)T46.O and (T0331)S47.N only 0.000 apart, marking (T0331)S47.N as missing
WARNING: atoms too close: (T0331)Y100.O and (T0331)Y101.N only 0.000 apart, marking (T0331)Y101.N as missing
WARNING: atoms too close: (T0331)Y101.O and (T0331)Q102.N only 0.000 apart, marking (T0331)Y101.O as missing
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS4.pdb.gz looking for model 1
WARNING: atoms too close: (T0331)I9.O and (T0331)L10.N only 0.000 apart, marking (T0331)L10.N as missing
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS5.pdb.gz looking for model 1
# Found a chain break before 146
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS5
# ReadConformPDB reading from PDB file servers/karypis.srv_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv_TS5
# ReadConformPDB reading from PDB file servers/keasar-server_TS1.pdb.gz looking for model 1
# Found a chain break before 136
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS1
# ReadConformPDB reading from PDB file servers/keasar-server_TS2.pdb.gz looking for model 1
# Found a chain break before 84
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS2
# ReadConformPDB reading from PDB file servers/keasar-server_TS3.pdb.gz looking for model 1
# Found a chain break before 136
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS3
# ReadConformPDB reading from PDB file servers/keasar-server_TS4.pdb.gz looking for model 1
# Found a chain break before 126
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS4
# ReadConformPDB reading from PDB file servers/keasar-server_TS5.pdb.gz looking for model 1
# Found a chain break before 126
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS5
# ReadConformPDB reading from PDB file servers/mGen-3D_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation mGen-3D_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS2
# ReadConformPDB reading from PDB file servers/nFOLD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation nFOLD_TS3
# ReadConformPDB reading from PDB file servers/nFOLD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS4
# ReadConformPDB reading from PDB file servers/nFOLD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation nFOLD_TS5
# ReadConformPDB reading from PDB file servers/panther2_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0331 can't currently be optimized by undertaker
# naming current conformation panther2_TS1
# ReadConformPDB reading from PDB file servers/shub_TS1.pdb.gz looking for model 1
# Found a chain break before 145
# copying to AlignedFragments data structure
# naming current conformation shub_TS1
# command:Using radius: 8.0000
Metaserver mode
NUMB_ALIGNS: 269
model score 0.5114
model score 0.6339
model score 0.5892
model score 0.6525
model score 0.5846
model score 0.0926
model score 0.0845
model score 0.0708
model score 0.1152
model score 0.1210
model score 0.1784
model score 0.5982
model score 0.5671
model score 0.6347
model score 0.5871
model score 0.0780
model score -0.2193
model score -0.2312
model score -0.0251
model score 0.0574
model score 1.0105
model score 1.1847
model score 1.5427
model score 1.3345
model score 1.3782
model score -0.4951
model score 0.6263
model score -0.5240
model score 0.3492
model score 1.0849
model score 0.4892
model score -0.4738
model score -0.4547
model score -0.4171
model score -0.3197
model score -0.4509
model score 0.4099
model score -0.1835
model score -0.0198
model score -0.4178
model score 0.3873
model score 1.2799
model score 1.2790
model score 1.2800
model score 1.2812
model score 1.2780
model score -0.3408
model score -0.3460
model score 0.0334
model score -0.4506
model score -0.3896
model score -0.2922
model score -0.4171
model score -0.4509
model score -0.4738
model score -0.3460
model score 0.0780
model score -0.2205
model score -0.2312
model score 0.4603
model score -0.0251
model score 1.2692
model score 1.2871
model score 1.2722
model score 1.2710
model score 1.2691
model score 1.2692
model score 1.2871
model score 1.2722
model score 1.2710
model score 1.2691
model score 1.6210
model score 1.8752
model score 2.0584
model score 2.2794
model score 2.1556
model score 0.5067
model score 0.4825
model score 0.4716
model score 0.3669
model score 0.3266
model score 1.2856
model score 1.2876
model score 1.2861
model score 1.2858
model score 1.2820
model score 0.5798
model score 0.5959
model score 0.5853
model score 0.5368
model score 0.5472
model score -0.2126
model score 0.4303
model score 0.3891
model score 0.7801
model score 0.7801
model score 0.5180
model score 0.5195
model score -0.2564
model score 0.3493
model score -0.3867
model score -0.4951
model score -0.4951
model score -0.2012
model score 0.2446
model score 0.2377
model score -0.3071
model score 0.5825
model score -0.3346
model score -0.1531
model score -0.4048
model score -0.3394
model score -0.3325
model score -0.3992
model score 0.4865
model score -0.4596
model score -0.4685
model score -0.3793
model score -0.3964
model score 0.4380
model score -0.3651
model score -0.5244
model score -0.4222
model score -0.5061
model score -0.4451
model score -0.4453
model score -0.3816
model score -0.3464
model score -0.3890
model score 2.0535
model score 1.7125
model score 1.7531
model score 1.5522
model score 1.8726
model score 0.4930
model score 0.4909
model score 0.4910
model score 0.4872
model score 0.4867
model score 0.5136
model score 0.5217
model score 0.5085
model score 0.4543
model score 0.5123
model score -0.3911
model score -0.4015
model score -0.3932
model score -0.3916
model score -0.3696
model score -0.3901
model score -0.3803
model score -0.3781
model score -0.3511
model score -0.4134
model score -0.3802
model score -0.3930
model score -0.4890
model score -0.4752
model score -0.4908
model score -0.5109
model score -0.3890
model score -0.4186
model score -0.3835
model score -0.4230
model score -0.3979
model score -0.3866
model score -0.2365
model score -0.3615
model score -0.4280
model score -0.3304
model score -0.4441
model score -0.3655
model score -0.3962
model score -0.4621
model score -0.3863
model score -0.3930
model score -0.4174
model score -0.4752
model score -0.4890
model score -0.4908
model score 0.9396
model score 0.5868
model score 0.6041
model score 0.6416
model score 0.6066
model score 1.2856
model score 1.2857
model score 1.2860
model score 1.2856
model score 1.2857
model score 1.2863
model score 1.2863
model score 1.2863
model score 1.2863
model score 1.2771
model score 0.3844
model score 0.4829
model score 0.5772
model score 0.6470
model score 0.4852
model score -0.3890
model score -0.4186
model score 0.6382
model score 0.6358
model score -0.3279
model score -0.3844
model score -0.4557
model score -0.4033
model score -0.3297
model score -0.3967
model score 0.6106
model score -0.3965
model score -0.3933
model score 0.6956
model score -0.2799
model score 1.2688
model score 1.2692
model score 1.2694
model score 1.2692
model score 1.2690
model score -0.3724
model score 1.2771
model score 1.2771
model score 1.2771
model score 1.2771
model score 1.2771
model score -0.3947
model score -0.3837
model score -0.4335
model score -0.4665
model score -0.4258
model score -0.4096
model score -0.2189
model score 1.2656
model score 1.2688
model score 1.2853
model score 1.2754
model score 1.2860
model score 1.2792
model score 1.2810
model score 1.2771
model score -0.3617
model score -0.3037
model score -0.3355
model score -0.2914
model score 1.3098
model score 1.8937
model score 2.0663
model score 2.2758
model score 2.0269
model score 2.2864
model score -0.3733
model score -0.3810
model score -0.4423
model score -0.3499
model score 1.4514
model score -0.2716
model score -0.2380
model score -0.2716
model score -0.2859
model score -0.2643
model score -0.4340
model score -0.3209
model score -0.3154
model score 0.5363
model score -0.4121
model score 0.6462
model score 0.1859
model score -0.4875
weight: 0.6684 eval: 0.5114 min: -0.5244 max: 2.2864
weight: 0.6291 eval: 0.6339 min: -0.5244 max: 2.2864
weight: 0.6434 eval: 0.5892 min: -0.5244 max: 2.2864
weight: 0.6232 eval: 0.6525 min: -0.5244 max: 2.2864
weight: 0.6449 eval: 0.5846 min: -0.5244 max: 2.2864
weight: 0.8024 eval: 0.0926 min: -0.5244 max: 2.2864
weight: 0.8050 eval: 0.0845 min: -0.5244 max: 2.2864
weight: 0.8094 eval: 0.0708 min: -0.5244 max: 2.2864
weight: 0.7952 eval: 0.1152 min: -0.5244 max: 2.2864
weight: 0.7933 eval: 0.1210 min: -0.5244 max: 2.2864
weight: 0.7750 eval: 0.1784 min: -0.5244 max: 2.2864
weight: 0.6406 eval: 0.5982 min: -0.5244 max: 2.2864
weight: 0.6505 eval: 0.5671 min: -0.5244 max: 2.2864
weight: 0.6289 eval: 0.6347 min: -0.5244 max: 2.2864
weight: 0.6441 eval: 0.5871 min: -0.5244 max: 2.2864
weight: 0.8071 eval: 0.0780 min: -0.5244 max: 2.2864
weight: 0.9023 eval: -0.2193 min: -0.5244 max: 2.2864
weight: 0.9061 eval: -0.2312 min: -0.5244 max: 2.2864
weight: 0.8401 eval: -0.0251 min: -0.5244 max: 2.2864
weight: 0.8137 eval: 0.0574 min: -0.5244 max: 2.2864
weight: 0.5085 eval: 1.0105 min: -0.5244 max: 2.2864
weight: 0.4528 eval: 1.1847 min: -0.5244 max: 2.2864
weight: 0.3381 eval: 1.5427 min: -0.5244 max: 2.2864
weight: 0.4048 eval: 1.3345 min: -0.5244 max: 2.2864
weight: 0.3908 eval: 1.3782 min: -0.5244 max: 2.2864
weight: 0.9906 eval: -0.4951 min: -0.5244 max: 2.2864
weight: 0.6316 eval: 0.6263 min: -0.5244 max: 2.2864
weight: 0.9999 eval: -0.5240 min: -0.5244 max: 2.2864
weight: 0.7203 eval: 0.3492 min: -0.5244 max: 2.2864
weight: 0.4847 eval: 1.0849 min: -0.5244 max: 2.2864
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Adding 5462 constraints to all2.constraints
Done adding distance constraints
# command:Reading probabilities from probabilities.dat
Reading constraints from ConstraintSet all2.constraints
maxweight: 1.0000
Optimizing...
 Probability sum: -263.0555, CN propb: -263.0555 weights: 0.3347 constraints: 471
# command:Found ConstraintSet
# PrintContacts align.constraints_meta02
Number of constraints in align2.constraints 471
# command:Found ConstraintSet
# PrintContacts align_bonus.constraints_meta02
Number of constraints in align2.constraints.bonus 471
# command:Found ConstraintSet
# PrintContacts rejected.constraints_meta02
Number of constraints in rejected2.constraints 4991
# command:Found ConstraintSet
# PrintContacts rejected_bonus.constraints_meta02
Number of constraints in rejected2.constraints.bonus 4991
# command:Found ConstraintSet
# PrintContacts non_contacts.constraints_meta02
Number of constraints in noncontact2.constraints 0
# command:Found ConstraintSet
# PrintContacts non_contacts_bonus.constraints_meta02
Number of constraints in noncontact2.constraints.bonus 0
# command:Found ConstraintSet
# PrintContacts all.constraints_meta02
Number of constraints in all2.constraints 5462
# command: