# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/
# command:# reading dunbrack-2191.atoms
#
#computed average backbone with maximum peptide_sq_deviance = 0.002
# computed average trans backbone unit from 53157 examples
# computed average trans backbone unit before proline from 2010 examples
# computed average cis backbone unit from 97 examples
# trans (non-proline) backbone unit:
#	  CA= -2.2087 1.0126 -0.0030
#	   O= -0.1499 2.2440 0.0016
#	   C= -0.6889 1.1368 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4581 -0.0000 0.0000
# cis backbone unit:
#	  CA= -0.1436 2.4534 -0.0002
#	   O= -2.0284 0.9742 0.0015
#	   C= -0.8018 1.0771 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4668 0.0000 0.0000
# trans backbone unit before proline:
#	  CA= -2.2100 1.0631 -0.0014
#	   O= -0.1236 2.2458 0.0075
#	   C= -0.6872 1.1517 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4660 0.0000 0.0000


# After reading dunbrack-2191.atoms have 2191 chains in training database
#  Count of chains,residues,atoms: 2191,500310,3902258
#  493341 residues have no bad marker
#  3226 residues lack atoms needed to compute omega
#  1453 residues have cis peptide
#  number of each bad type:
#	NON_STANDARD_RESIDUE	4
#	HAS_OXT	1167
#	TOO_MANY_ATOMS	1
#	TOO_FEW_ATOMS	3052
#	HAS_UNKNOWN_ATOMS	9
#	HAS_DUPLICATE_ATOMS	0
#	CHAIN_BREAK_BEFORE	979
#	NON_PLANAR_PEPTIDE	888
#	BAD_PEPTIDE	2680
#  Note: may sum to more than number of residues, 
#    because one residue may have multiple problems
# command:# Reading rotamer library from dunbrack-2191.rot
# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/
# command:# ReadAtomType exp-pdb.types
Read AtomType exp-pdb with 49 types.
# command:# ReadClashTable exp-pdb-2191-2symm.clash
# Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2
# command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0318/
# command:# Making conformation for sequence T0318 numbered 1 through 491
Created new target T0318 from T0318.a2m
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0318/
# command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0318//projects/compbio/experiments/protein-predict/casp7/T0318/align.constraints_v3.costfcn or /projects/compbio/experiments/protein-predict/casp7/T0318//projects/compbio/experiments/protein-predict/casp7/T0318/align.constraints_v3.costfcn.gz for input
Trying /projects/compbio/experiments/protein-predict/casp7/T0318/align.constraints_v3.costfcn
# reading script from file /projects/compbio/experiments/protein-predict/casp7/T0318/align.constraints_v3.costfcn
# future Constraint commands -> align
# future HelixConstraint commands -> align
# future StrandConstraint commands -> align
# future SheetConstraint commands -> align
# future Hbond commands -> align
# future SSbond commands -> align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)C301.CB) [> 3.7984 = 6.3307 < 8.2299] w=1.0000 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)H299.CB) [> 3.5899 = 5.9832 < 7.7781] w=1.0000 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)H299.CB) [> 3.7856 = 6.3093 < 8.2021] w=1.0000 to align
# Constraint # added constraint: constraint((T0318)V194.CB, (T0318)I204.CB) [> 2.9771 = 4.9619 < 6.4505] w=0.9871 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)C301.CB) [> 3.9115 = 6.5191 < 8.4749] w=0.9819 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)F358.CB) [> 3.7793 = 6.2988 < 8.1884] w=0.9615 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)A354.CB) [> 3.4048 = 5.6747 < 7.3771] w=0.9615 to align
# Constraint # added constraint: constraint((T0318)H246.CB, (T0318)T355.CB) [> 3.4740 = 5.7900 < 7.5270] w=0.9615 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)L302.CB) [> 3.5719 = 5.9532 < 7.7392] w=0.9593 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)M282.CB) [> 3.7316 = 6.2193 < 8.0850] w=0.9495 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)A279.CB) [> 3.3125 = 5.5209 < 7.1771] w=0.9495 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)M282.CB) [> 3.1078 = 5.1797 < 6.7336] w=0.9299 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)L298.CB) [> 3.7790 = 6.2983 < 8.1877] w=0.9284 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)L298.CB) [> 3.7679 = 6.2798 < 8.1638] w=0.9232 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)C301.CB) [> 3.3470 = 5.5784 < 7.2519] w=0.9230 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)H299.CB) [> 3.5068 = 5.8447 < 7.5981] w=0.9230 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)T356.CB) [> 3.7211 = 6.2018 < 8.0623] w=0.9224 to align
# Constraint # added constraint: constraint((T0318)H246.CB, (T0318)T297.CB) [> 3.3880 = 5.6466 < 7.3406] w=0.9148 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)G278.CA) [> 4.0673 = 6.7788 < 8.8125] w=0.9104 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)L302.CB) [> 3.4863 = 5.8106 < 7.5537] w=0.9014 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)G278.CA) [> 2.7861 = 4.6435 < 6.0365] w=0.8908 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)C303.CB) [> 3.0658 = 5.1097 < 6.6426] w=0.8791 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)T297.CB) [> 3.4493 = 5.7488 < 7.4734] w=0.8741 to align
# Constraint # added constraint: constraint((T0318)S202.CB, (T0318)H238.CB) [> 3.3375 = 5.5625 < 7.2312] w=0.8724 to align
# Constraint # added constraint: constraint((T0318)I204.CB, (T0318)L236.CB) [> 2.9374 = 4.8956 < 6.3643] w=0.8724 to align
# Constraint # added constraint: constraint((T0318)T205.CB, (T0318)L236.CB) [> 4.6701 = 7.7836 < 10.1186] w=0.8724 to align
# Constraint # added constraint: constraint((T0318)V206.CB, (T0318)V234.CB) [> 3.5128 = 5.8546 < 7.6110] w=0.8724 to align
# Constraint # added constraint: constraint((T0318)I207.CB, (T0318)V235.CB) [> 3.7018 = 6.1697 < 8.0207] w=0.8724 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)F358.CB) [> 3.4026 = 5.6709 < 7.3722] w=0.8713 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)I357.CB) [> 4.2617 = 7.1027 < 9.2336] w=0.8713 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)A300.CB) [> 3.4501 = 5.7501 < 7.4751] w=0.8658 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)L302.CB) [> 3.9919 = 6.6532 < 8.6492] w=0.8580 to align
# Constraint # added constraint: constraint((T0318)A193.CB, (T0318)L283.CB) [> 3.6857 = 6.1428 < 7.9856] w=0.8575 to align
# Constraint # added constraint: constraint((T0318)S202.CB, (T0318)L236.CB) [> 3.4402 = 5.7337 < 7.4538] w=0.8510 to align
# Constraint # added constraint: constraint((T0318)K203.CB, (T0318)L236.CB) [> 4.3792 = 7.2987 < 9.4883] w=0.8510 to align
# Constraint # added constraint: constraint((T0318)K203.CB, (T0318)S237.CB) [> 3.0074 = 5.0123 < 6.5160] w=0.8510 to align
# Constraint # added constraint: constraint((T0318)I204.CB, (T0318)V234.CB) [> 4.0435 = 6.7392 < 8.7610] w=0.8510 to align
# Constraint # added constraint: constraint((T0318)I204.CB, (T0318)V235.CB) [> 4.2264 = 7.0440 < 9.1572] w=0.8510 to align
# Constraint # added constraint: constraint((T0318)Y286.CB, (T0318)A300.CB) [> 3.1128 = 5.1880 < 6.7443] w=0.8463 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)I304.CB) [> 3.6608 = 6.1013 < 7.9317] w=0.8369 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)L302.CB) [> 4.1748 = 6.9580 < 9.0454] w=0.8336 to align
# Constraint # added constraint: constraint((T0318)R208.CB, (T0318)A232.CB) [> 3.8067 = 6.3446 < 8.2479] w=0.8252 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)A300.CB) [> 3.6723 = 6.1205 < 7.9567] w=0.8249 to align
# Constraint # added constraint: constraint((T0318)A193.CB, (T0318)V234.CB) [> 3.5242 = 5.8737 < 7.6358] w=0.8203 to align
# Constraint # added constraint: constraint((T0318)T200.CB, (T0318)V290.CB) [> 2.6496 = 4.4159 < 5.7407] w=0.8196 to align
# Constraint # added constraint: constraint((T0318)T244.CB, (T0318)T297.CB) [> 3.1083 = 5.1804 < 6.7346] w=0.8155 to align
# Constraint # added constraint: constraint((T0318)I204.CB, (T0318)S237.CB) [> 4.5132 = 7.5219 < 9.7785] w=0.8107 to align
# Constraint # added constraint: constraint((T0318)V206.CB, (T0318)V235.CB) [> 4.6078 = 7.6796 < 9.9835] w=0.8073 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)M360.CB) [> 3.5332 = 5.8886 < 7.6552] w=0.8064 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)M360.CB) [> 3.8501 = 6.4169 < 8.3419] w=0.8064 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)M360.CB) [> 2.4316 = 4.0527 < 5.2685] w=0.8064 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)M360.CB) [> 4.4897 = 7.4828 < 9.7276] w=0.8064 to align
# Constraint # added constraint: constraint((T0318)G197.CA, (T0318)L236.CB) [> 3.9955 = 6.6592 < 8.6570] w=0.7999 to align
# Constraint # added constraint: constraint((T0318)S202.CB, (T0318)S237.CB) [> 3.8834 = 6.4723 < 8.4140] w=0.7999 to align
# Constraint # added constraint: constraint((T0318)T205.CB, (T0318)V235.CB) [> 2.7489 = 4.5815 < 5.9560] w=0.7999 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)M360.CB) [> 4.2786 = 7.1311 < 9.2704] w=0.7999 to align
# Constraint # added constraint: constraint((T0318)S202.CB, (T0318)V290.CB) [> 4.1392 = 6.8986 < 8.9682] w=0.7989 to align
# Constraint # added constraint: constraint((T0318)A279.CB, (T0318)L302.CB) [> 3.2572 = 5.4287 < 7.0573] w=0.7974 to align
# Constraint # added constraint: constraint((T0318)G197.CA, (T0318)Y286.CB) [> 4.1838 = 6.9730 < 9.0649] w=0.7925 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)Y286.CB) [> 3.6802 = 6.1336 < 7.9737] w=0.7924 to align
# Constraint # added constraint: constraint((T0318)V190.CB, (T0318)V206.CB) [> 3.5487 = 5.9146 < 7.6890] w=0.7912 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)C303.CB) [> 4.1836 = 6.9727 < 9.0645] w=0.7902 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)C303.CB) [> 4.1818 = 6.9698 < 9.0607] w=0.7902 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)F358.CB) [> 4.4475 = 7.4125 < 9.6362] w=0.7881 to align
# Constraint # added constraint: constraint((T0318)V190.CB, (T0318)A232.CB) [> 3.5553 = 5.9256 < 7.7032] w=0.7862 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)A279.CB) [> 3.2603 = 5.4338 < 7.0640] w=0.7783 to align
# Constraint # added constraint: constraint((T0318)V206.CB, (T0318)A232.CB) [> 2.9543 = 4.9238 < 6.4010] w=0.7731 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)I357.CB) [> 3.0923 = 5.1539 < 6.7000] w=0.7663 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)Q296.CB) [> 3.9309 = 6.5515 < 8.5170] w=0.7637 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)C301.CB) [> 3.3508 = 5.5846 < 7.2600] w=0.7617 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)M360.CB) [> 3.4565 = 5.7609 < 7.4891] w=0.7608 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)D359.CB) [> 3.7304 = 6.2174 < 8.0826] w=0.7608 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)A300.CB) [> 3.8036 = 6.3393 < 8.2411] w=0.7595 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)G278.CA) [> 4.1336 = 6.8894 < 8.9562] w=0.7588 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)A354.CB) [> 3.5629 = 5.9381 < 7.7196] w=0.7551 to align
# Constraint # added constraint: constraint((T0318)Y286.CB, (T0318)L298.CB) [> 3.8656 = 6.4426 < 8.3754] w=0.7548 to align
# Constraint # added constraint: constraint((T0318)I207.CB, (T0318)V234.CB) [> 4.4956 = 7.4927 < 9.7406] w=0.7487 to align
# Constraint # added constraint: constraint((T0318)T356.CB, (T0318)L385.CB) [> 3.5069 = 5.8448 < 7.5982] w=0.7478 to align
# Constraint # added constraint: constraint((T0318)V190.CB, (T0318)V234.CB) [> 2.9946 = 4.9910 < 6.4883] w=0.7423 to align
# Constraint # added constraint: constraint((T0318)T205.CB, (T0318)S237.CB) [> 4.4591 = 7.4318 < 9.6614] w=0.7423 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)M360.CB) [> 3.3407 = 5.5678 < 7.2382] w=0.7413 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)D359.CB) [> 4.4541 = 7.4235 < 9.6505] w=0.7413 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)G277.CA) [> 4.3799 = 7.2998 < 9.4898] w=0.7413 to align
# Constraint # added constraint: constraint((T0318)S237.CB, (T0318)H299.CB) [> 3.3591 = 5.5984 < 7.2779] w=0.7413 to align
# Constraint # added constraint: constraint((T0318)T205.CB, (T0318)V234.CB) [> 4.5120 = 7.5200 < 9.7760] w=0.7413 to align
# Constraint # added constraint: constraint((T0318)L189.CB, (T0318)A279.CB) [> 4.2328 = 7.0546 < 9.1710] w=0.7413 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)T362.CB) [> 3.9987 = 6.6645 < 8.6638] w=0.7379 to align
# Constraint # added constraint: constraint((T0318)I207.CB, (T0318)A232.CB) [> 3.8163 = 6.3606 < 8.2688] w=0.7351 to align
# Constraint # added constraint: constraint((T0318)T186.CB, (T0318)P231.CB) [> 3.8744 = 6.4573 < 8.3944] w=0.7311 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)A300.CB) [> 3.9777 = 6.6295 < 8.6184] w=0.7259 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)A361.CB) [> 3.7130 = 6.1884 < 8.0449] w=0.7259 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)A300.CB) [> 4.3876 = 7.3126 < 9.5064] w=0.7254 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)L298.CB) [> 4.2860 = 7.1434 < 9.2864] w=0.7201 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)C301.CB) [> 4.1059 = 6.8431 < 8.8961] w=0.7073 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)L302.CB) [> 2.5762 = 4.2937 < 5.5818] w=0.7051 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)A300.CB) [> 2.5779 = 4.2965 < 5.5855] w=0.7051 to align
# Constraint # added constraint: constraint((T0318)S237.CB, (T0318)T297.CB) [> 4.3326 = 7.2210 < 9.3873] w=0.7051 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)T297.CB) [> 4.1307 = 6.8845 < 8.9499] w=0.7051 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)T362.CB) [> 3.8801 = 6.4668 < 8.4068] w=0.7023 to align
# Constraint # added constraint: constraint((T0318)L289.CB, (T0318)L298.CB) [> 3.6038 = 6.0064 < 7.8083] w=0.6989 to align
# Constraint # added constraint: constraint((T0318)H246.CB, (T0318)Q296.CB) [> 3.2672 = 5.4453 < 7.0789] w=0.6986 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)H299.CB) [> 4.0078 = 6.6797 < 8.6837] w=0.6934 to align
# Constraint # added constraint: constraint((T0318)V194.CB, (T0318)V206.CB) [> 4.0800 = 6.8000 < 8.8401] w=0.6909 to align
# Constraint # added constraint: constraint((T0318)V196.CB, (T0318)S287.CB) [> 3.4404 = 5.7340 < 7.4541] w=0.6902 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)H299.CB) [> 4.1972 = 6.9954 < 9.0941] w=0.6869 to align
# Constraint # added constraint: constraint((T0318)S237.CB, (T0318)L298.CB) [> 4.4662 = 7.4437 < 9.6768] w=0.6869 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)L298.CB) [> 2.7443 = 4.5739 < 5.9461] w=0.6869 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)C301.CB) [> 4.4321 = 7.3868 < 9.6028] w=0.6865 to align
# Constraint # added constraint: constraint((T0318)L385.CB, (T0318)R452.CB) [> 3.2053 = 5.3422 < 6.9449] w=0.6861 to align
# Constraint # added constraint: constraint((T0318)Q384.CB, (T0318)R452.CB) [> 4.3328 = 7.2213 < 9.3877] w=0.6861 to align
# Constraint # added constraint: constraint((T0318)I357.CB, (T0318)R452.CB) [> 4.3043 = 7.1739 < 9.3261] w=0.6861 to align
# Constraint # added constraint: constraint((T0318)T356.CB, (T0318)R452.CB) [> 3.0144 = 5.0240 < 6.5312] w=0.6861 to align
# Constraint # added constraint: constraint((T0318)G197.CA, (T0318)V290.CB) [> 3.9899 = 6.6499 < 8.6449] w=0.6837 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)C303.CB) [> 3.3203 = 5.5339 < 7.1940] w=0.6765 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)G344.CA) [> 4.1504 = 6.9173 < 8.9925] w=0.6700 to align
# Constraint # added constraint: constraint((T0318)V206.CB, (T0318)F233.CB) [> 4.4132 = 7.3554 < 9.5620] w=0.6700 to align
# Constraint # added constraint: constraint((T0318)V196.CB, (T0318)L283.CB) [> 3.9343 = 6.5571 < 8.5243] w=0.6624 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)W453.CB) [> 4.5308 = 7.5513 < 9.8167] w=0.6580 to align
# Constraint # added constraint: constraint((T0318)I357.CB, (T0318)W453.CB) [> 3.0525 = 5.0876 < 6.6138] w=0.6580 to align
# Constraint # added constraint: constraint((T0318)T356.CB, (T0318)W453.CB) [> 4.4847 = 7.4745 < 9.7169] w=0.6580 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)M282.CB) [> 3.3845 = 5.6408 < 7.3330] w=0.6502 to align
# Constraint # added constraint: constraint((T0318)T355.CB, (T0318)R452.CB) [> 4.3109 = 7.1848 < 9.3402] w=0.6450 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)V305.CB) [> 2.7624 = 4.6040 < 5.9851] w=0.6434 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)C301.CB) [> 4.0657 = 6.7762 < 8.8090] w=0.6424 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)L302.CB) [> 4.1606 = 6.9344 < 9.0147] w=0.6402 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)I304.CB) [> 3.0966 = 5.1611 < 6.7094] w=0.6253 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)A361.CB) [> 3.0449 = 5.0748 < 6.5972] w=0.6251 to align
# Constraint # added constraint: constraint((T0318)T186.CB, (T0318)I304.CB) [> 3.2874 = 5.4790 < 7.1227] w=0.6244 to align
# Constraint # added constraint: constraint((T0318)T200.CB, (T0318)S287.CB) [> 3.2264 = 5.3773 < 6.9904] w=0.6224 to align
# Constraint # added constraint: constraint((T0318)T186.CB, (T0318)A232.CB) [> 3.1800 = 5.3001 < 6.8901] w=0.6188 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)I304.CB) [> 3.5687 = 5.9479 < 7.7323] w=0.6148 to align
# Constraint # added constraint: constraint((T0318)V240.CB, (T0318)T297.CB) [> 3.3897 = 5.6496 < 7.3444] w=0.6137 to align
# Constraint # added constraint: constraint((T0318)I389.CB, (T0318)L454.CB) [> 3.6742 = 6.1237 < 7.9608] w=0.6009 to align
# Constraint # added constraint: constraint((T0318)E386.CB, (T0318)L454.CB) [> 3.6446 = 6.0743 < 7.8965] w=0.6009 to align
# Constraint # added constraint: constraint((T0318)L385.CB, (T0318)L454.CB) [> 2.7244 = 4.5407 < 5.9029] w=0.6009 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)L454.CB) [> 3.8187 = 6.3646 < 8.2739] w=0.6009 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)L454.CB) [> 4.1998 = 6.9997 < 9.0996] w=0.6009 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)L454.CB) [> 2.9501 = 4.9168 < 6.3918] w=0.6009 to align
# Constraint # added constraint: constraint((T0318)T356.CB, (T0318)L454.CB) [> 4.3381 = 7.2301 < 9.3992] w=0.6009 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)W453.CB) [> 4.1762 = 6.9603 < 9.0484] w=0.5930 to align
# Constraint # added constraint: constraint((T0318)I357.CB, (T0318)L454.CB) [> 4.5607 = 7.6012 < 9.8815] w=0.5802 to align
# Constraint # added constraint: constraint((T0318)E239.CB, (T0318)T297.CB) [> 3.5605 = 5.9342 < 7.7145] w=0.5774 to align
# Constraint # added constraint: constraint((T0318)E245.CB, (T0318)K353.CB) [> 3.3956 = 5.6594 < 7.3572] w=0.5745 to align
# Constraint # added constraint: constraint((T0318)H246.CB, (T0318)K353.CB) [> 4.0084 = 6.6807 < 8.6849] w=0.5744 to align
# Constraint # added constraint: constraint((T0318)D382.CB, (T0318)R452.CB) [> 2.4207 = 4.0345 < 5.2449] w=0.5718 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)A300.CB) [> 4.5288 = 7.5481 < 9.8125] w=0.5679 to align
# Constraint # added constraint: constraint((T0318)E245.CB, (T0318)T297.CB) [> 4.3030 = 7.1716 < 9.3231] w=0.5622 to align
# Constraint # added constraint: constraint((T0318)A232.CB, (T0318)I304.CB) [> 3.0371 = 5.0619 < 6.5805] w=0.5604 to align
# Constraint # added constraint: constraint((T0318)V345.CB, (T0318)I357.CB) [> 4.4052 = 7.3419 < 9.5445] w=0.5602 to align
# Constraint # added constraint: constraint((T0318)I389.CB, (T0318)V400.CB) [> 3.8473 = 6.4123 < 8.3359] w=0.5591 to align
# Constraint # added constraint: constraint((T0318)I390.CB, (T0318)V400.CB) [> 3.3920 = 5.6534 < 7.3494] w=0.5580 to align
# Constraint # added constraint: constraint((T0318)L283.CB, (T0318)A300.CB) [> 4.0079 = 6.6798 < 8.6837] w=0.5526 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)G344.CA) [> 3.4095 = 5.6826 < 7.3873] w=0.5498 to align
# Constraint # added constraint: constraint((T0318)L176.CB, (T0318)A280.CB) [> 3.3275 = 5.5459 < 7.2096] w=0.5464 to align
# Constraint # added constraint: constraint((T0318)L176.CB, (T0318)A279.CB) [> 4.1649 = 6.9414 < 9.0239] w=0.5464 to align
# Constraint # added constraint: constraint((T0318)T173.CB, (T0318)A280.CB) [> 2.6784 = 4.4640 < 5.8032] w=0.5464 to align
# Constraint # added constraint: constraint((T0318)E172.CB, (T0318)A280.CB) [> 3.4834 = 5.8057 < 7.5474] w=0.5464 to align
# Constraint # added constraint: constraint((T0318)N381.CB, (T0318)W453.CB) [> 3.1276 = 5.2127 < 6.7766] w=0.5459 to align
# Constraint # added constraint: constraint((T0318)D382.CB, (T0318)W453.CB) [> 3.7501 = 6.2502 < 8.1253] w=0.5459 to align
# Constraint # added constraint: constraint((T0318)A193.CB, (T0318)L302.CB) [> 3.8498 = 6.4164 < 8.3413] w=0.5441 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)E306.CB) [> 3.3155 = 5.5258 < 7.1836] w=0.5403 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)A354.CB) [> 3.6647 = 6.1078 < 7.9401] w=0.5400 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)E284.CB) [> 2.8681 = 4.7801 < 6.2142] w=0.5399 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)Q296.CB) [> 3.1918 = 5.3197 < 6.9156] w=0.5397 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)I357.CB) [> 3.3255 = 5.5425 < 7.2052] w=0.5347 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)A280.CB) [> 3.5714 = 5.9524 < 7.7381] w=0.5330 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)T356.CB) [> 4.0596 = 6.7661 < 8.7959] w=0.5322 to align
# Constraint # added constraint: constraint((T0318)M360.CB, (T0318)L456.CB) [> 3.2829 = 5.4716 < 7.1130] w=0.5290 to align
# Constraint # added constraint: constraint((T0318)D187.CB, (T0318)A232.CB) [> 3.9033 = 6.5054 < 8.4571] w=0.5278 to align
# Constraint # added constraint: constraint((T0318)A193.CB, (T0318)I204.CB) [> 3.7249 = 6.2082 < 8.0706] w=0.5248 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)A401.CB) [> 3.5146 = 5.8576 < 7.6149] w=0.5200 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)A401.CB) [> 3.7771 = 6.2953 < 8.1838] w=0.5200 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)V400.CB) [> 3.3895 = 5.6492 < 7.3439] w=0.5200 to align
# Constraint # added constraint: constraint((T0318)A226.CB, (T0318)N308.CB) [> 3.1284 = 5.2140 < 6.7783] w=0.5135 to align
# Constraint # added constraint: constraint((T0318)G227.CA, (T0318)N308.CB) [> 3.4547 = 5.7578 < 7.4851] w=0.5135 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)Y286.CB) [> 3.9405 = 6.5675 < 8.5377] w=0.5135 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)V290.CB) [> 3.7494 = 6.2490 < 8.1237] w=0.5135 to align
# Constraint # added constraint: constraint((T0318)L283.CB, (T0318)L302.CB) [> 4.1935 = 6.9891 < 9.0858] w=0.5135 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)A348.CB) [> 3.8939 = 6.4899 < 8.4369] w=0.5135 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)I389.CB) [> 3.2300 = 5.3834 < 6.9984] w=0.5135 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)V400.CB) [> 2.9950 = 4.9916 < 6.4891] w=0.5135 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)A401.CB) [> 4.2805 = 7.1341 < 9.2744] w=0.5135 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)H455.CB) [> 4.2768 = 7.1280 < 9.2664] w=0.5100 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)H455.CB) [> 2.6291 = 4.3819 < 5.6964] w=0.5100 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)L456.CB) [> 3.9859 = 6.6432 < 8.6362] w=0.5100 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)L456.CB) [> 3.6090 = 6.0150 < 7.8195] w=0.5100 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)H455.CB) [> 2.8962 = 4.8270 < 6.2751] w=0.5035 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)H299.CB) [> 4.5160 = 7.5267 < 9.7847] w=0.5035 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)T297.CB) [> 4.2965 = 7.1608 < 9.3091] w=0.5035 to align
# Constraint # added constraint: constraint((T0318)P241.CB, (T0318)S295.CB) [> 3.4663 = 5.7772 < 7.5104] w=0.5031 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)H299.CB) [> 4.3976 = 7.3294 < 9.5282] w=0.5029 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)A285.CB) [> 4.0700 = 6.7833 < 8.8182] w=0.5006 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)G281.CA) [> 4.4835 = 7.4725 < 9.7142] w=0.5006 to align
# Constraint # added constraint: constraint((T0318)G197.CA, (T0318)S287.CB) [> 3.7166 = 6.1944 < 8.0527] w=0.4996 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)I304.CB) [> 3.7348 = 6.2247 < 8.0921] w=0.4992 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)C301.CB) [> 3.9701 = 6.6168 < 8.6019] w=0.4965 to align
# Constraint # added constraint: constraint((T0318)H246.CB, (T0318)L298.CB) [> 3.7318 = 6.2196 < 8.0855] w=0.4965 to align
# Constraint # added constraint: constraint((T0318)A226.CB, (T0318)D343.CB) [> 3.1933 = 5.3222 < 6.9189] w=0.4965 to align
# Constraint # added constraint: constraint((T0318)T173.CB, (T0318)G277.CA) [> 3.7544 = 6.2573 < 8.1344] w=0.4953 to align
# Constraint # added constraint: constraint((T0318)L176.CB, (T0318)M276.CB) [> 3.3786 = 5.6310 < 7.3203] w=0.4953 to align
# Constraint # added constraint: constraint((T0318)L176.CB, (T0318)G277.CA) [> 4.4871 = 7.4785 < 9.7221] w=0.4953 to align
# Constraint # added constraint: constraint((T0318)I177.CB, (T0318)M276.CB) [> 3.8596 = 6.4327 < 8.3626] w=0.4953 to align
# Constraint # added constraint: constraint((T0318)A285.CB, (T0318)A300.CB) [> 4.4908 = 7.4847 < 9.7301] w=0.4918 to align
# Constraint # added constraint: constraint((T0318)I357.CB, (T0318)L451.CB) [> 3.3648 = 5.6080 < 7.2904] w=0.4910 to align
# Constraint # added constraint: constraint((T0318)T356.CB, (T0318)L451.CB) [> 4.3619 = 7.2698 < 9.4508] w=0.4910 to align
# Constraint # added constraint: constraint((T0318)V240.CB, (T0318)Q296.CB) [> 2.8811 = 4.8019 < 6.2424] w=0.4880 to align
# Constraint # added constraint: constraint((T0318)Q296.CB, (T0318)T355.CB) [> 3.7748 = 6.2914 < 8.1788] w=0.4858 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)L298.CB) [> 4.5451 = 7.5751 < 9.8476] w=0.4853 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)D359.CB) [> 3.2730 = 5.4550 < 7.0915] w=0.4816 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)F358.CB) [> 4.0746 = 6.7910 < 8.8283] w=0.4811 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)I357.CB) [> 4.5424 = 7.5707 < 9.8420] w=0.4811 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)I304.CB) [> 4.2549 = 7.0916 < 9.2190] w=0.4765 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)H455.CB) [> 4.2982 = 7.1637 < 9.3128] w=0.4713 to align
# Constraint # added constraint: constraint((T0318)E245.CB, (T0318)T355.CB) [> 2.7811 = 4.6351 < 6.0257] w=0.4704 to align
# Constraint # added constraint: constraint((T0318)V240.CB, (T0318)L298.CB) [> 4.2379 = 7.0631 < 9.1820] w=0.4699 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)A300.CB) [> 4.3229 = 7.2048 < 9.3662] w=0.4657 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)V305.CB) [> 3.9291 = 6.5485 < 8.5131] w=0.4612 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)E306.CB) [> 4.3820 = 7.3033 < 9.4942] w=0.4599 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)M403.CB) [> 3.0909 = 5.1515 < 6.6969] w=0.4565 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)M403.CB) [> 3.8956 = 6.4927 < 8.4405] w=0.4565 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)M403.CB) [> 2.6680 = 4.4467 < 5.7807] w=0.4565 to align
# Constraint # added constraint: constraint((T0318)V190.CB, (T0318)I204.CB) [> 3.9112 = 6.5187 < 8.4743] w=0.4533 to align
# Constraint # added constraint: constraint((T0318)T380.CB, (T0318)P402.CB) [> 3.6995 = 6.1658 < 8.0155] w=0.4522 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)P402.CB) [> 3.6770 = 6.1284 < 7.9669] w=0.4522 to align
# Constraint # added constraint: constraint((T0318)A193.CB, (T0318)L236.CB) [> 3.5293 = 5.8822 < 7.6469] w=0.4507 to align
# Constraint # added constraint: constraint((T0318)A354.CB, (T0318)L451.CB) [> 2.7433 = 4.5721 < 5.9438] w=0.4498 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)L302.CB) [> 4.2056 = 7.0094 < 9.1122] w=0.4496 to align
# Constraint # added constraint: constraint((T0318)T200.CB, (T0318)K291.CB) [> 3.7825 = 6.3041 < 8.1953] w=0.4485 to align
# Constraint # added constraint: constraint((T0318)V190.CB, (T0318)L302.CB) [> 4.3837 = 7.3061 < 9.4980] w=0.4485 to align
# Constraint # added constraint: constraint((T0318)H246.CB, (T0318)H299.CB) [> 3.1590 = 5.2650 < 6.8444] w=0.4476 to align
# Constraint # added constraint: constraint((T0318)L176.CB, (T0318)A188.CB) [> 3.7237 = 6.2061 < 8.0680] w=0.4443 to align
# Constraint # added constraint: constraint((T0318)A348.CB, (T0318)I357.CB) [> 3.4545 = 5.7575 < 7.4847] w=0.4429 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)E306.CB) [> 3.0134 = 5.0223 < 6.5290] w=0.4414 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)M282.CB) [> 2.8189 = 4.6982 < 6.1076] w=0.4391 to align
# Constraint # added constraint: constraint((T0318)A285.CB, (T0318)L480.CB) [> 3.4829 = 5.8049 < 7.5463] w=0.4372 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)L456.CB) [> 4.1872 = 6.9787 < 9.0723] w=0.4350 to align
# Constraint # added constraint: constraint((T0318)L176.CB, (T0318)E192.CB) [> 4.2679 = 7.1132 < 9.2472] w=0.4341 to align
# Constraint # added constraint: constraint((T0318)V345.CB, (T0318)H444.CB) [> 3.3547 = 5.5912 < 7.2685] w=0.4334 to align
# Constraint # added constraint: constraint((T0318)L189.CB, (T0318)V234.CB) [> 3.7367 = 6.2278 < 8.0961] w=0.4303 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)L454.CB) [> 3.8665 = 6.4442 < 8.3775] w=0.4303 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)T356.CB) [> 3.2006 = 5.3343 < 6.9346] w=0.4293 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)F358.CB) [> 4.4123 = 7.3538 < 9.5600] w=0.4293 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)A279.CB) [> 3.3337 = 5.5562 < 7.2231] w=0.4293 to align
# Constraint # added constraint: constraint((T0318)A193.CB, (T0318)A279.CB) [> 4.0888 = 6.8146 < 8.8590] w=0.4272 to align
# Constraint # added constraint: constraint((T0318)A279.CB, (T0318)I304.CB) [> 3.9256 = 6.5427 < 8.5055] w=0.4264 to align
# Constraint # added constraint: constraint((T0318)E172.CB, (T0318)E192.CB) [> 4.1737 = 6.9561 < 9.0430] w=0.4232 to align
# Constraint # added constraint: constraint((T0318)S237.CB, (T0318)A300.CB) [> 4.5738 = 7.6230 < 9.9099] w=0.4229 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)A285.CB) [> 3.7072 = 6.1786 < 8.0322] w=0.4196 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)Y286.CB) [> 3.8769 = 6.4616 < 8.4000] w=0.4196 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)N307.CB) [> 3.2741 = 5.4569 < 7.0940] w=0.4167 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)H455.CB) [> 4.2594 = 7.0991 < 9.2288] w=0.4160 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)L456.CB) [> 4.0240 = 6.7066 < 8.7186] w=0.4160 to align
# Constraint # added constraint: constraint((T0318)K203.CB, (T0318)E239.CB) [> 4.2845 = 7.1409 < 9.2831] w=0.4075 to align
# Constraint # added constraint: constraint((T0318)K349.CB, (T0318)E449.CB) [> 3.1129 = 5.1882 < 6.7446] w=0.3978 to align
# Constraint # added constraint: constraint((T0318)T356.CB, (T0318)D382.CB) [> 4.2222 = 7.0370 < 9.1482] w=0.3974 to align
# Constraint # added constraint: constraint((T0318)V345.CB, (T0318)G442.CA) [> 4.5688 = 7.6146 < 9.8990] w=0.3968 to align
# Constraint # added constraint: constraint((T0318)H299.CB, (T0318)L352.CB) [> 3.3959 = 5.6598 < 7.3577] w=0.3967 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)P402.CB) [> 4.4122 = 7.3536 < 9.5597] w=0.3936 to align
# Constraint # added constraint: constraint((T0318)H375.CB, (T0318)A401.CB) [> 3.0624 = 5.1039 < 6.6351] w=0.3929 to align
# Constraint # added constraint: constraint((T0318)T185.CB, (T0318)T229.CB) [> 3.2871 = 5.4785 < 7.1221] w=0.3914 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)A348.CB) [> 3.2489 = 5.4148 < 7.0392] w=0.3902 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)V400.CB) [> 4.3286 = 7.2144 < 9.3787] w=0.3899 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)L399.CB) [> 4.4031 = 7.3384 < 9.5400] w=0.3871 to align
# Constraint # added constraint: constraint((T0318)T186.CB, (T0318)V255.CB) [> 3.4060 = 5.6767 < 7.3797] w=0.3867 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)V255.CB) [> 3.2180 = 5.3633 < 6.9722] w=0.3867 to align
# Constraint # added constraint: constraint((T0318)P180.CB, (T0318)K273.CB) [> 3.6303 = 6.0504 < 7.8656] w=0.3848 to align
# Constraint # added constraint: constraint((T0318)A226.CB, (T0318)V305.CB) [> 3.3712 = 5.6188 < 7.3044] w=0.3832 to align
# Constraint # added constraint: constraint((T0318)N182.CB, (T0318)P231.CB) [> 4.1154 = 6.8590 < 8.9166] w=0.3822 to align
# Constraint # added constraint: constraint((T0318)I389.CB, (T0318)L456.CB) [> 4.1496 = 6.9160 < 8.9908] w=0.3799 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)L456.CB) [> 4.2124 = 7.0207 < 9.1270] w=0.3797 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)I389.CB) [> 4.2229 = 7.0383 < 9.1497] w=0.3783 to align
# Constraint # added constraint: constraint((T0318)S202.CB, (T0318)Y286.CB) [> 3.9928 = 6.6547 < 8.6511] w=0.3760 to align
# Constraint # added constraint: constraint((T0318)T258.CB, (T0318)M269.CB) [> 4.1106 = 6.8510 < 8.9064] w=0.3758 to align
# Constraint # added constraint: constraint((T0318)T258.CB, (T0318)N307.CB) [> 3.0982 = 5.1637 < 6.7128] w=0.3758 to align
# Constraint # added constraint: constraint((T0318)G260.CA, (T0318)N307.CB) [> 3.6164 = 6.0273 < 7.8355] w=0.3758 to align
# Constraint # added constraint: constraint((T0318)T380.CB, (T0318)W453.CB) [> 3.8816 = 6.4694 < 8.4102] w=0.3758 to align
# Constraint # added constraint: constraint((T0318)I319.CB, (T0318)V328.CB) [> 3.9254 = 6.5423 < 8.5050] w=0.3724 to align
# Constraint # added constraint: constraint((T0318)T380.CB, (T0318)L454.CB) [> 3.1426 = 5.2376 < 6.8089] w=0.3724 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)D457.CB) [> 4.2409 = 7.0682 < 9.1886] w=0.3722 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)D457.CB) [> 3.0009 = 5.0016 < 6.5020] w=0.3722 to align
# Constraint # added constraint: constraint((T0318)A392.CB, (T0318)L479.CB) [> 3.2634 = 5.4390 < 7.0707] w=0.3721 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)F476.CB) [> 3.9912 = 6.6520 < 8.6476] w=0.3721 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)P473.CB) [> 3.3647 = 5.6078 < 7.2901] w=0.3721 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)G344.CA) [> 3.6678 = 6.1130 < 7.9469] w=0.3706 to align
# Constraint # added constraint: constraint((T0318)T186.CB, (T0318)P230.CB) [> 3.5645 = 5.9409 < 7.7232] w=0.3699 to align
# Constraint # added constraint: constraint((T0318)V194.CB, (T0318)V234.CB) [> 3.3231 = 5.5384 < 7.2000] w=0.3696 to align
# Constraint # added constraint: constraint((T0318)G442.CA, (T0318)W453.CB) [> 4.3306 = 7.2177 < 9.3830] w=0.3654 to align
# Constraint # added constraint: constraint((T0318)T173.CB, (T0318)P473.CB) [> 3.6582 = 6.0970 < 7.9261] w=0.3651 to align
# Constraint # added constraint: constraint((T0318)E172.CB, (T0318)V196.CB) [> 4.0784 = 6.7974 < 8.8366] w=0.3625 to align
# Constraint # added constraint: constraint((T0318)T362.CB, (T0318)I458.CB) [> 3.3125 = 5.5208 < 7.1771] w=0.3604 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)D457.CB) [> 4.0887 = 6.8145 < 8.8588] w=0.3571 to align
# Constraint # added constraint: constraint((T0318)T380.CB, (T0318)H455.CB) [> 3.7858 = 6.3096 < 8.2025] w=0.3543 to align
# Constraint # added constraint: constraint((T0318)I389.CB, (T0318)L479.CB) [> 3.7439 = 6.2398 < 8.1117] w=0.3504 to align
# Constraint # added constraint: constraint((T0318)M360.CB, (T0318)F476.CB) [> 4.0663 = 6.7772 < 8.8104] w=0.3504 to align
# Constraint # added constraint: constraint((T0318)A285.CB, (T0318)S477.CB) [> 3.3598 = 5.5996 < 7.2795] w=0.3504 to align
# Constraint # added constraint: constraint((T0318)L189.CB, (T0318)V255.CB) [> 4.1825 = 6.9708 < 9.0620] w=0.3458 to align
# Constraint # added constraint: constraint((T0318)P180.CB, (T0318)N271.CB) [> 4.0195 = 6.6991 < 8.7089] w=0.3450 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)G281.CA) [> 3.7644 = 6.2739 < 8.1561] w=0.3447 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)S477.CB) [> 3.4224 = 5.7041 < 7.4153] w=0.3434 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)G470.CA) [> 3.4588 = 5.7648 < 7.4942] w=0.3434 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)A361.CB) [> 4.0395 = 6.7326 < 8.7523] w=0.3433 to align
# Constraint # added constraint: constraint((T0318)T362.CB, (T0318)D457.CB) [> 4.3453 = 7.2421 < 9.4148] w=0.3414 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)D457.CB) [> 3.9897 = 6.6495 < 8.6444] w=0.3414 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)L363.CB) [> 4.0733 = 6.7889 < 8.8256] w=0.3391 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)L363.CB) [> 2.9816 = 4.9693 < 6.4601] w=0.3391 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)K273.CB) [> 2.7421 = 4.5702 < 5.9412] w=0.3337 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)L302.CB) [> 2.4443 = 4.0739 < 5.2961] w=0.3334 to align
# Constraint # added constraint: constraint((T0318)T362.CB, (T0318)A459.CB) [> 3.1836 = 5.3060 < 6.8978] w=0.3307 to align
# Constraint # added constraint: constraint((T0318)K273.CB, (T0318)T362.CB) [> 3.0290 = 5.0483 < 6.5628] w=0.3292 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)L456.CB) [> 4.1730 = 6.9550 < 9.0415] w=0.3273 to align
# Constraint # added constraint: constraint((T0318)V190.CB, (T0318)I304.CB) [> 4.0331 = 6.7217 < 8.7383] w=0.3251 to align
# Constraint # added constraint: constraint((T0318)T229.CB, (T0318)V305.CB) [> 4.1158 = 6.8597 < 8.9175] w=0.3250 to align
# Constraint # added constraint: constraint((T0318)T173.CB, (T0318)G470.CA) [> 3.2013 = 5.3355 < 6.9361] w=0.3245 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)C303.CB) [> 3.8321 = 6.3868 < 8.3028] w=0.3225 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)C301.CB) [> 4.5159 = 7.5264 < 9.7844] w=0.3216 to align
# Constraint # added constraint: constraint((T0318)I319.CB, (T0318)I330.CB) [> 4.1195 = 6.8658 < 8.9255] w=0.3213 to align
# Constraint # added constraint: constraint((T0318)D317.CB, (T0318)N331.CB) [> 4.1553 = 6.9254 < 9.0030] w=0.3213 to align
# Constraint # added constraint: constraint((T0318)P316.CB, (T0318)T333.CB) [> 3.6041 = 6.0069 < 7.8090] w=0.3213 to align
# Constraint # added constraint: constraint((T0318)P316.CB, (T0318)N331.CB) [> 3.5894 = 5.9823 < 7.7770] w=0.3213 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)I458.CB) [> 3.7770 = 6.2950 < 8.1835] w=0.3209 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)L341.CB) [> 4.2282 = 7.0470 < 9.1611] w=0.3190 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)I340.CB) [> 2.9030 = 4.8383 < 6.2897] w=0.3190 to align
# Constraint # added constraint: constraint((T0318)I220.CB, (T0318)P231.CB) [> 4.2913 = 7.1522 < 9.2978] w=0.3189 to align
# Constraint # added constraint: constraint((T0318)A279.CB, (T0318)M360.CB) [> 4.6228 = 7.7047 < 10.0161] w=0.3188 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)M360.CB) [> 4.2001 = 7.0002 < 9.1003] w=0.3188 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)A288.CB) [> 3.8503 = 6.4172 < 8.3424] w=0.3188 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)S434.CB) [> 2.7187 = 4.5312 < 5.8906] w=0.3187 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)I390.CB) [> 3.6013 = 6.0021 < 7.8027] w=0.3184 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)G344.CA) [> 3.8141 = 6.3568 < 8.2639] w=0.3172 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)A361.CB) [> 3.8077 = 6.3462 < 8.2500] w=0.3154 to align
# Constraint # added constraint: constraint((T0318)Q367.CB, (T0318)A377.CB) [> 2.9872 = 4.9786 < 6.4722] w=0.3148 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)V305.CB) [> 3.9597 = 6.5995 < 8.5794] w=0.3146 to align
# Constraint # added constraint: constraint((T0318)T229.CB, (T0318)E306.CB) [> 3.0729 = 5.1215 < 6.6579] w=0.3146 to align
# Constraint # added constraint: constraint((T0318)L363.CB, (T0318)I458.CB) [> 4.1393 = 6.8988 < 8.9685] w=0.3137 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)A348.CB) [> 4.5463 = 7.5772 < 9.8504] w=0.3119 to align
# Constraint # added constraint: constraint((T0318)T173.CB, (T0318)G281.CA) [> 2.8955 = 4.8259 < 6.2736] w=0.3113 to align
# Constraint # added constraint: constraint((T0318)I177.CB, (T0318)K273.CB) [> 4.4784 = 7.4641 < 9.7033] w=0.3113 to align
# Constraint # added constraint: constraint((T0318)T179.CB, (T0318)K273.CB) [> 4.3876 = 7.3127 < 9.5065] w=0.3113 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)D334.CB) [> 4.3858 = 7.3097 < 9.5026] w=0.3113 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)E336.CB) [> 3.8286 = 6.3810 < 8.2953] w=0.3113 to align
# Constraint # added constraint: constraint((T0318)G259.CA, (T0318)D334.CB) [> 2.5729 = 4.2881 < 5.5746] w=0.3113 to align
# Constraint # added constraint: constraint((T0318)G259.CA, (T0318)E336.CB) [> 4.1460 = 6.9100 < 8.9830] w=0.3113 to align
# Constraint # added constraint: constraint((T0318)E306.CB, (T0318)A361.CB) [> 4.5813 = 7.6356 < 9.9263] w=0.3105 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)N307.CB) [> 3.4583 = 5.7639 < 7.4931] w=0.3091 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)V254.CB) [> 4.0645 = 6.7741 < 8.8063] w=0.3078 to align
# Constraint # added constraint: constraint((T0318)T185.CB, (T0318)P230.CB) [> 4.3615 = 7.2692 < 9.4499] w=0.3059 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)Y347.CB) [> 3.8581 = 6.4301 < 8.3592] w=0.3056 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)Y347.CB) [> 4.5934 = 7.6556 < 9.9523] w=0.3044 to align
# Constraint # added constraint: constraint((T0318)I441.CB, (T0318)H455.CB) [> 3.3618 = 5.6031 < 7.2840] w=0.3023 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)I441.CB) [> 4.6615 = 7.7691 < 10.0998] w=0.3023 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)I441.CB) [> 3.9700 = 6.6167 < 8.6017] w=0.3023 to align
# Constraint # added constraint: constraint((T0318)V345.CB, (T0318)I441.CB) [> 4.0061 = 6.6769 < 8.6800] w=0.3023 to align
# Constraint # added constraint: constraint((T0318)Y256.CB, (T0318)N307.CB) [> 4.1495 = 6.9158 < 8.9906] w=0.3011 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)Y256.CB) [> 2.3567 = 3.9279 < 5.1062] w=0.3011 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)L363.CB) [> 3.1594 = 5.2656 < 6.8453] w=0.3011 to align
# Constraint # added constraint: constraint((T0318)H222.CB, (T0318)I330.CB) [> 4.3032 = 7.1720 < 9.3236] w=0.3004 to align
# Constraint # added constraint: constraint((T0318)A226.CB, (T0318)I304.CB) [> 4.2522 = 7.0870 < 9.2131] w=0.3003 to align
# Constraint # added constraint: constraint((T0318)L184.CB, (T0318)V255.CB) [> 3.6209 = 6.0349 < 7.8454] w=0.2998 to align
# Constraint # added constraint: constraint((T0318)M403.CB, (T0318)S434.CB) [> 3.7702 = 6.2837 < 8.1688] w=0.2993 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)E336.CB) [> 3.9338 = 6.5563 < 8.5232] w=0.2993 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)D359.CB) [> 4.2803 = 7.1338 < 9.2739] w=0.2993 to align
# Constraint # added constraint: constraint((T0318)L189.CB, (T0318)G253.CA) [> 4.4687 = 7.4478 < 9.6821] w=0.2993 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)D275.CB) [> 4.2959 = 7.1599 < 9.3079] w=0.2982 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)M276.CB) [> 3.1328 = 5.2214 < 6.7878] w=0.2982 to align
# Constraint # added constraint: constraint((T0318)I183.CB, (T0318)P231.CB) [> 4.5480 = 7.5799 < 9.8539] w=0.2977 to align
# Constraint # added constraint: constraint((T0318)V120.CB, (T0318)L163.CB) [> 4.0744 = 6.7906 < 8.8278] w=0.2976 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)L480.CB) [> 3.6114 = 6.0191 < 7.8248] w=0.2972 to align
# Constraint # added constraint: constraint((T0318)A335.CB, (T0318)A437.CB) [> 4.3164 = 7.1940 < 9.3523] w=0.2968 to align
# Constraint # added constraint: constraint((T0318)T258.CB, (T0318)N308.CB) [> 3.3154 = 5.5256 < 7.1833] w=0.2968 to align
# Constraint # added constraint: constraint((T0318)A226.CB, (T0318)I312.CB) [> 3.6442 = 6.0737 < 7.8958] w=0.2966 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)I304.CB) [> 3.5122 = 5.8537 < 7.6098] w=0.2965 to align
# Constraint # added constraint: constraint((T0318)I263.CB, (T0318)V309.CB) [> 3.5067 = 5.8444 < 7.5978] w=0.2965 to align
# Constraint # added constraint: constraint((T0318)Q367.CB, (T0318)G376.CA) [> 4.3880 = 7.3134 < 9.5074] w=0.2958 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)C301.CB) [> 4.3559 = 7.2598 < 9.4378] w=0.2943 to align
# Constraint # added constraint: constraint((T0318)E168.CB, (T0318)S287.CB) [> 4.0024 = 6.6706 < 8.6718] w=0.2936 to align
# Constraint # added constraint: constraint((T0318)S202.CB, (T0318)E239.CB) [> 4.4875 = 7.4791 < 9.7228] w=0.2934 to align
# Constraint # added constraint: constraint((T0318)A280.CB, (T0318)S477.CB) [> 4.5539 = 7.5899 < 9.8668] w=0.2928 to align
# Constraint # added constraint: constraint((T0318)G201.CA, (T0318)E239.CB) [> 3.3529 = 5.5881 < 7.2646] w=0.2921 to align
# Constraint # added constraint: constraint((T0318)G372.CA, (T0318)A460.CB) [> 3.1066 = 5.1777 < 6.7311] w=0.2892 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)P473.CB) [> 3.2453 = 5.4089 < 7.0315] w=0.2892 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)P473.CB) [> 3.2622 = 5.4370 < 7.0681] w=0.2892 to align
# Constraint # added constraint: constraint((T0318)A160.CB, (T0318)E284.CB) [> 3.1580 = 5.2633 < 6.8423] w=0.2874 to align
# Constraint # added constraint: constraint((T0318)L289.CB, (T0318)G481.CA) [> 4.4663 = 7.4439 < 9.6771] w=0.2863 to align
# Constraint # added constraint: constraint((T0318)E386.CB, (T0318)P402.CB) [> 3.4601 = 5.7668 < 7.4968] w=0.2863 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)L456.CB) [> 4.3007 = 7.1679 < 9.3182] w=0.2857 to align
# Constraint # added constraint: constraint((T0318)A280.CB, (T0318)P473.CB) [> 4.2866 = 7.1443 < 9.2876] w=0.2854 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)A279.CB) [> 3.2640 = 5.4400 < 7.0721] w=0.2845 to align
# Constraint # added constraint: constraint((T0318)L189.CB, (T0318)V254.CB) [> 3.4428 = 5.7379 < 7.4593] w=0.2845 to align
# Constraint # added constraint: constraint((T0318)T186.CB, (T0318)V254.CB) [> 3.9354 = 6.5591 < 8.5268] w=0.2845 to align
# Constraint # added constraint: constraint((T0318)Y256.CB, (T0318)M272.CB) [> 3.4397 = 5.7328 < 7.4526] w=0.2836 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)G472.CA) [> 4.4587 = 7.4313 < 9.6606] w=0.2820 to align
# Constraint # added constraint: constraint((T0318)L121.CB, (T0318)D159.CB) [> 3.8707 = 6.4511 < 8.3865] w=0.2798 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)G281.CA) [> 4.5582 = 7.5970 < 9.8760] w=0.2798 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)V345.CB) [> 3.7573 = 6.2621 < 8.1407] w=0.2798 to align
# Constraint # added constraint: constraint((T0318)L121.CB, (T0318)A160.CB) [> 3.4225 = 5.7042 < 7.4154] w=0.2792 to align
# Constraint # added constraint: constraint((T0318)L121.CB, (T0318)L163.CB) [> 2.0533 = 3.4222 < 4.4489] w=0.2792 to align
# Constraint # added constraint: constraint((T0318)A125.CB, (T0318)S167.CB) [> 2.4566 = 4.0943 < 5.3226] w=0.2792 to align
# Constraint # added constraint: constraint((T0318)Y256.CB, (T0318)K273.CB) [> 3.5124 = 5.8541 < 7.6103] w=0.2792 to align
# Constraint # added constraint: constraint((T0318)Y256.CB, (T0318)D275.CB) [> 4.0796 = 6.7993 < 8.8391] w=0.2792 to align
# Constraint # added constraint: constraint((T0318)N307.CB, (T0318)D334.CB) [> 4.5408 = 7.5680 < 9.8384] w=0.2792 to align
# Constraint # added constraint: constraint((T0318)L189.CB, (T0318)I304.CB) [> 3.3036 = 5.5059 < 7.1577] w=0.2783 to align
# Constraint # added constraint: constraint((T0318)T186.CB, (T0318)E306.CB) [> 4.2765 = 7.1276 < 9.2659] w=0.2783 to align
# Constraint # added constraint: constraint((T0318)T186.CB, (T0318)V305.CB) [> 3.6661 = 6.1102 < 7.9433] w=0.2783 to align
# Constraint # added constraint: constraint((T0318)L121.CB, (T0318)L166.CB) [> 4.4131 = 7.3551 < 9.5617] w=0.2740 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)L189.CB) [> 3.6515 = 6.0858 < 7.9115] w=0.2716 to align
# Constraint # added constraint: constraint((T0318)I177.CB, (T0318)G470.CA) [> 3.7062 = 6.1771 < 8.0302] w=0.2711 to align
# Constraint # added constraint: constraint((T0318)A174.CB, (T0318)G470.CA) [> 3.3584 = 5.5974 < 7.2766] w=0.2711 to align
# Constraint # added constraint: constraint((T0318)R373.CB, (T0318)A460.CB) [> 3.0611 = 5.1019 < 6.6324] w=0.2709 to align
# Constraint # added constraint: constraint((T0318)D159.CB, (T0318)E284.CB) [> 3.1477 = 5.2462 < 6.8200] w=0.2704 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)C303.CB) [> 4.3778 = 7.2964 < 9.4853] w=0.2699 to align
# Constraint # added constraint: constraint((T0318)S424.CB, (T0318)V436.CB) [> 4.3642 = 7.2736 < 9.4557] w=0.2680 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)A348.CB) [> 4.2503 = 7.0839 < 9.2091] w=0.2668 to align
# Constraint # added constraint: constraint((T0318)I177.CB, (T0318)G277.CA) [> 3.1113 = 5.1855 < 6.7412] w=0.2667 to align
# Constraint # added constraint: constraint((T0318)F217.CB, (T0318)G344.CA) [> 4.3036 = 7.1726 < 9.3244] w=0.2667 to align
# Constraint # added constraint: constraint((T0318)F217.CB, (T0318)Y347.CB) [> 4.3740 = 7.2901 < 9.4771] w=0.2667 to align
# Constraint # added constraint: constraint((T0318)V345.CB, (T0318)D359.CB) [> 3.9622 = 6.6037 < 8.5849] w=0.2667 to align
# Constraint # added constraint: constraint((T0318)H375.CB, (T0318)V400.CB) [> 3.4504 = 5.7507 < 7.4759] w=0.2667 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)P402.CB) [> 4.4694 = 7.4491 < 9.6838] w=0.2667 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)D457.CB) [> 4.0552 = 6.7586 < 8.7862] w=0.2657 to align
# Constraint # added constraint: constraint((T0318)L363.CB, (T0318)D457.CB) [> 3.1851 = 5.3085 < 6.9011] w=0.2657 to align
# Constraint # added constraint: constraint((T0318)F346.CB, (T0318)H444.CB) [> 3.3903 = 5.6504 < 7.3456] w=0.2646 to align
# Constraint # added constraint: constraint((T0318)I357.CB, (T0318)I445.CB) [> 3.9895 = 6.6491 < 8.6439] w=0.2646 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)L404.CB) [> 4.5725 = 7.6208 < 9.9070] w=0.2646 to align
# Constraint # added constraint: constraint((T0318)N381.CB, (T0318)F405.CB) [> 3.9396 = 6.5659 < 8.5357] w=0.2646 to align
# Constraint # added constraint: constraint((T0318)T265.CB, (T0318)M276.CB) [> 4.4299 = 7.3831 < 9.5980] w=0.2635 to align
# Constraint # added constraint: constraint((T0318)L184.CB, (T0318)P230.CB) [> 4.1508 = 6.9180 < 8.9935] w=0.2614 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)T265.CB) [> 3.9201 = 6.5336 < 8.4936] w=0.2606 to align
# Constraint # added constraint: constraint((T0318)A226.CB, (T0318)S310.CB) [> 2.8895 = 4.8159 < 6.2607] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G227.CA, (T0318)E306.CB) [> 3.3065 = 5.5109 < 7.1641] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G227.CA, (T0318)S310.CB) [> 3.5494 = 5.9156 < 7.6903] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G227.CA, (T0318)I312.CB) [> 4.4414 = 7.4023 < 9.6230] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)A279.CB) [> 4.4379 = 7.3965 < 9.6155] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)L283.CB) [> 4.1639 = 6.9398 < 9.0217] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V240.CB, (T0318)F294.CB) [> 3.1877 = 5.3128 < 6.9067] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)L341.CB) [> 3.9543 = 6.5906 < 8.5677] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)A348.CB) [> 3.5455 = 5.9091 < 7.6818] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)G277.CA) [> 4.6757 = 7.7929 < 10.1307] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A226.CB, (T0318)L261.CB) [> 4.6909 = 7.8181 < 10.1636] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A226.CB, (T0318)G260.CA) [> 3.6553 = 6.0921 < 7.9197] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K225.CB, (T0318)N314.CB) [> 4.2152 = 7.0253 < 9.1329] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K225.CB, (T0318)A313.CB) [> 4.0704 = 6.7840 < 8.8192] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K225.CB, (T0318)I312.CB) [> 3.3762 = 5.6270 < 7.3151] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G224.CA, (T0318)N307.CB) [> 4.1428 = 6.9046 < 8.9760] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G224.CA, (T0318)E306.CB) [> 3.9038 = 6.5064 < 8.4583] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G224.CA, (T0318)V305.CB) [> 2.6769 = 4.4614 < 5.7998] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)I340.CB) [> 3.2843 = 5.4738 < 7.1159] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)L339.CB) [> 3.1921 = 5.3202 < 6.9163] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)G337.CA) [> 4.3143 = 7.1905 < 9.3477] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)E336.CB) [> 2.6626 = 4.4377 < 5.7690] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)N314.CB) [> 3.9404 = 6.5674 < 8.5376] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)N307.CB) [> 3.3959 = 5.6598 < 7.3578] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)V305.CB) [> 3.3283 = 5.5472 < 7.2114] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G260.CA, (T0318)D334.CB) [> 3.9406 = 6.5676 < 8.5379] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G260.CA, (T0318)T333.CB) [> 2.8030 = 4.6717 < 6.0732] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G260.CA, (T0318)A313.CB) [> 3.4056 = 5.6761 < 7.3789] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G260.CA, (T0318)V309.CB) [> 2.7411 = 4.5684 < 5.9390] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G259.CA, (T0318)T333.CB) [> 3.5552 = 5.9254 < 7.7030] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G259.CA, (T0318)V309.CB) [> 4.5637 = 7.6062 < 9.8880] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G259.CA, (T0318)N307.CB) [> 3.2034 = 5.3390 < 6.9408] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)T258.CB, (T0318)V309.CB) [> 3.6800 = 6.1334 < 7.9734] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)T258.CB, (T0318)M272.CB) [> 4.2268 = 7.0446 < 9.1580] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)D275.CB) [> 2.4378 = 4.0629 < 5.2818] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)M272.CB) [> 2.5057 = 4.1761 < 5.4289] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)Y256.CB, (T0318)N308.CB) [> 4.5194 = 7.5324 < 9.7921] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)Y256.CB, (T0318)E306.CB) [> 3.0098 = 5.0163 < 6.5211] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)K273.CB) [> 4.3585 = 7.2641 < 9.4434] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)I340.CB) [> 4.2073 = 7.0122 < 9.1159] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)V305.CB) [> 3.5920 = 5.9867 < 7.7828] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)M276.CB) [> 3.3726 = 5.6209 < 7.3072] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)D275.CB) [> 2.4134 = 4.0223 < 5.2290] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)M272.CB) [> 4.6136 = 7.6893 < 9.9961] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)I340.CB) [> 4.3320 = 7.2200 < 9.3860] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)G277.CA) [> 4.1163 = 6.8604 < 8.9185] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)M276.CB) [> 2.2333 = 3.7222 < 4.8389] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)D275.CB) [> 4.1929 = 6.9882 < 9.0847] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)L341.CB) [> 3.5561 = 5.9268 < 7.7048] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)I340.CB) [> 3.8015 = 6.3359 < 8.2367] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)G337.CA) [> 3.0938 = 5.1564 < 6.7033] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)M276.CB) [> 4.1647 = 6.9412 < 9.0236] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)D275.CB) [> 4.2920 = 7.1534 < 9.2994] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)L341.CB) [> 4.4073 = 7.3455 < 9.5492] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L212.CB, (T0318)P231.CB) [> 3.9393 = 6.5655 < 8.5351] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L212.CB, (T0318)Y221.CB) [> 3.5221 = 5.8701 < 7.6311] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G209.CA, (T0318)A232.CB) [> 4.5161 = 7.5269 < 9.7849] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)T185.CB, (T0318)V255.CB) [> 3.3249 = 5.5414 < 7.2039] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L184.CB, (T0318)M276.CB) [> 4.4924 = 7.4872 < 9.7334] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L184.CB, (T0318)K273.CB) [> 4.5827 = 7.6379 < 9.9292] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)E306.CB) [> 4.3155 = 7.1926 < 9.3503] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I177.CB, (T0318)A462.CB) [> 4.4081 = 7.3468 < 9.5508] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I177.CB, (T0318)A280.CB) [> 2.9919 = 4.9865 < 6.4824] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)T173.CB, (T0318)E284.CB) [> 2.3832 = 3.9720 < 5.1636] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)T173.CB, (T0318)L283.CB) [> 4.4406 = 7.4011 < 9.6214] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)E284.CB) [> 3.9990 = 6.6649 < 8.6644] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)A288.CB) [> 2.0989 = 3.4982 < 4.5476] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)A285.CB) [> 3.7260 = 6.2101 < 8.0731] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)S396.CB) [> 4.6446 = 7.7411 < 10.0634] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)D165.CB, (T0318)A288.CB) [> 3.4100 = 5.6834 < 7.3884] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A125.CB, (T0318)L163.CB) [> 3.8005 = 6.3341 < 8.2344] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)S122.CB, (T0318)L163.CB) [> 3.1950 = 5.3250 < 6.9225] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)V254.CB) [> 4.6515 = 7.7525 < 10.0783] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)H222.CB, (T0318)L339.CB) [> 3.9704 = 6.6174 < 8.6026] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)H222.CB, (T0318)I320.CB) [> 2.8722 = 4.7870 < 6.2231] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)H222.CB, (T0318)D318.CB) [> 4.1579 = 6.9299 < 9.0089] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)H222.CB, (T0318)N314.CB) [> 3.0477 = 5.0795 < 6.6033] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)Y221.CB, (T0318)P231.CB) [> 4.2261 = 7.0436 < 9.1566] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I220.CB, (T0318)G344.CA) [> 4.2085 = 7.0141 < 9.1184] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I220.CB, (T0318)D343.CB) [> 2.5942 = 4.3237 < 5.6208] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I220.CB, (T0318)I340.CB) [> 2.8333 = 4.7221 < 6.1387] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I220.CB, (T0318)L339.CB) [> 4.0233 = 6.7056 < 8.7173] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I220.CB, (T0318)V305.CB) [> 4.2487 = 7.0811 < 9.2054] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I220.CB, (T0318)C303.CB) [> 3.3207 = 5.5346 < 7.1949] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I220.CB, (T0318)F233.CB) [> 4.5617 = 7.6029 < 9.8837] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G219.CA, (T0318)D343.CB) [> 3.3266 = 5.5443 < 7.2076] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G219.CA, (T0318)A342.CB) [> 3.8858 = 6.4764 < 8.4193] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G219.CA, (T0318)I340.CB) [> 4.3387 = 7.2312 < 9.4005] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L212.CB, (T0318)F233.CB) [> 3.4321 = 5.7202 < 7.4363] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A215.CB, (T0318)L323.CB) [> 3.8997 = 6.4995 < 8.4494] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)F217.CB, (T0318)L323.CB) [> 3.1541 = 5.2568 < 6.8339] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)F217.CB, (T0318)D343.CB) [> 2.4484 = 4.0807 < 5.3049] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G218.CA, (T0318)I320.CB) [> 3.4945 = 5.8242 < 7.5715] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G218.CA, (T0318)K321.CB) [> 3.6472 = 6.0787 < 7.9023] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G218.CA, (T0318)M322.CB) [> 4.0629 = 6.7715 < 8.8029] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G218.CA, (T0318)L323.CB) [> 4.2190 = 7.0317 < 9.1411] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G218.CA, (T0318)D343.CB) [> 3.8893 = 6.4821 < 8.4267] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G219.CA, (T0318)I320.CB) [> 2.6102 = 4.3503 < 5.6554] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G219.CA, (T0318)K321.CB) [> 4.3722 = 7.2870 < 9.4732] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G219.CA, (T0318)M322.CB) [> 3.4373 = 5.7289 < 7.4476] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G219.CA, (T0318)V328.CB) [> 4.0070 = 6.6784 < 8.6819] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G219.CA, (T0318)L339.CB) [> 2.9612 = 4.9353 < 6.4160] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A366.CB, (T0318)A437.CB) [> 4.4873 = 7.4788 < 9.7225] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A366.CB, (T0318)S434.CB) [> 2.5880 = 4.3134 < 5.6074] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A366.CB, (T0318)G431.CA) [> 3.7717 = 6.2861 < 8.1720] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G365.CA, (T0318)A460.CB) [> 4.4615 = 7.4359 < 9.6666] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G365.CA, (T0318)A459.CB) [> 3.0320 = 5.0533 < 6.5693] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G365.CA, (T0318)S434.CB) [> 4.5866 = 7.6444 < 9.9377] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)A459.CB) [> 4.6298 = 7.7164 < 10.0313] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V345.CB, (T0318)I445.CB) [> 3.3213 = 5.5355 < 7.1961] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A342.CB, (T0318)H444.CB) [> 2.7836 = 4.6394 < 6.0312] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A342.CB, (T0318)A443.CB) [> 4.6240 = 7.7067 < 10.0187] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A342.CB, (T0318)L440.CB) [> 4.5754 = 7.6257 < 9.9134] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L341.CB, (T0318)H444.CB) [> 4.5557 = 7.5928 < 9.8706] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L341.CB, (T0318)I441.CB) [> 3.5416 = 5.9027 < 7.6735] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L341.CB, (T0318)A361.CB) [> 3.7991 = 6.3319 < 8.2314] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L341.CB, (T0318)D359.CB) [> 3.6181 = 6.0301 < 7.8391] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L339.CB, (T0318)N423.CB) [> 3.6947 = 6.1578 < 8.0051] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)R338.CB, (T0318)I441.CB) [> 3.8242 = 6.3737 < 8.2858] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)R338.CB, (T0318)L440.CB) [> 3.0661 = 5.1101 < 6.6431] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)R338.CB, (T0318)A437.CB) [> 3.5049 = 5.8415 < 7.5940] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)R338.CB, (T0318)N423.CB) [> 3.4438 = 5.7397 < 7.4616] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G337.CA, (T0318)A361.CB) [> 3.7916 = 6.3193 < 8.2151] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A335.CB, (T0318)S424.CB) [> 2.9358 = 4.8930 < 6.3608] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A335.CB, (T0318)N423.CB) [> 2.8661 = 4.7768 < 6.2098] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)N332.CB, (T0318)S424.CB) [> 2.8940 = 4.8233 < 6.2702] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)N332.CB, (T0318)N423.CB) [> 3.9556 = 6.5927 < 8.5705] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)N331.CB, (T0318)S424.CB) [> 3.0060 = 5.0100 < 6.5130] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)N331.CB, (T0318)N423.CB) [> 3.4516 = 5.7526 < 7.4784] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)N331.CB, (T0318)K422.CB) [> 3.3155 = 5.5259 < 7.1837] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I330.CB, (T0318)N423.CB) [> 2.7935 = 4.6559 < 6.0526] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I330.CB, (T0318)L339.CB) [> 3.9374 = 6.5623 < 8.5310] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)E329.CB, (T0318)N423.CB) [> 3.9579 = 6.5965 < 8.5755] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G442.CA, (T0318)H455.CB) [> 4.6672 = 7.7786 < 10.1122] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G438.CA, (T0318)H455.CB) [> 3.3274 = 5.5457 < 7.2094] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)N423.CB, (T0318)L440.CB) [> 4.0162 = 6.6936 < 8.7017] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M421.CB, (T0318)A443.CB) [> 3.4016 = 5.6693 < 7.3701] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M421.CB, (T0318)L440.CB) [> 3.8557 = 6.4261 < 8.3540] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G412.CA, (T0318)L439.CB) [> 4.5444 = 7.5741 < 9.8463] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A406.CB, (T0318)L439.CB) [> 4.6449 = 7.7415 < 10.0640] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A406.CB, (T0318)A435.CB) [> 4.3957 = 7.3261 < 9.5239] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)F405.CB, (T0318)L439.CB) [> 3.8737 = 6.4561 < 8.3930] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)F405.CB, (T0318)A435.CB) [> 4.4095 = 7.3491 < 9.5538] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L404.CB, (T0318)A435.CB) [> 3.6777 = 6.1294 < 7.9683] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M403.CB, (T0318)A435.CB) [> 3.7204 = 6.2006 < 8.0608] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V400.CB, (T0318)L456.CB) [> 4.4530 = 7.4217 < 9.6482] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)Q367.CB, (T0318)S434.CB) [> 2.5687 = 4.2812 < 5.5655] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)Q367.CB, (T0318)A459.CB) [> 2.7588 = 4.5980 < 5.9774] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)Q367.CB, (T0318)A460.CB) [> 2.9411 = 4.9019 < 6.3725] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A368.CB, (T0318)A460.CB) [> 2.3921 = 3.9868 < 5.1829] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L370.CB, (T0318)M403.CB) [> 4.4644 = 7.4407 < 9.6729] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L370.CB, (T0318)S434.CB) [> 3.5251 = 5.8752 < 7.6377] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)A460.CB) [> 3.7420 = 6.2367 < 8.1077] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)P461.CB) [> 2.9074 = 4.8456 < 6.2993] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)S434.CB) [> 3.4703 = 5.7838 < 7.5189] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)A460.CB) [> 4.3085 = 7.1809 < 9.3351] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)F405.CB) [> 3.1057 = 5.1761 < 6.7290] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)A435.CB) [> 4.5368 = 7.5613 < 9.8297] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)G438.CA) [> 3.1429 = 5.2381 < 6.8095] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)T380.CB, (T0318)I389.CB) [> 4.6084 = 7.6807 < 9.9849] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I390.CB, (T0318)P402.CB) [> 4.3947 = 7.3245 < 9.5218] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)D318.CB, (T0318)E329.CB) [> 4.4300 = 7.3833 < 9.5983] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)D317.CB, (T0318)I330.CB) [> 4.5043 = 7.5072 < 9.7593] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)P316.CB, (T0318)N332.CB) [> 3.8678 = 6.4464 < 8.3803] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)P316.CB, (T0318)I330.CB) [> 4.1796 = 6.9661 < 9.0559] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K315.CB, (T0318)T333.CB) [> 4.3746 = 7.2910 < 9.4783] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)N314.CB, (T0318)I330.CB) [> 3.5992 = 5.9987 < 7.7983] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)A313.CB, (T0318)T333.CB) [> 4.1770 = 6.9617 < 9.0503] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)N307.CB, (T0318)E336.CB) [> 2.8657 = 4.7761 < 6.2090] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V305.CB, (T0318)I340.CB) [> 3.8039 = 6.3398 < 8.2418] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)A462.CB) [> 3.9101 = 6.5168 < 8.4719] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M276.CB, (T0318)I304.CB) [> 4.0954 = 6.8257 < 8.8734] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)D275.CB, (T0318)T362.CB) [> 3.1183 = 5.1972 < 6.7564] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)D275.CB, (T0318)N307.CB) [> 4.7103 = 7.8505 < 10.2056] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)R274.CB, (T0318)A462.CB) [> 3.3198 = 5.5331 < 7.1930] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)R274.CB, (T0318)T362.CB) [> 3.8675 = 6.4459 < 8.3796] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K264.CB, (T0318)D334.CB) [> 3.9269 = 6.5448 < 8.5083] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I263.CB, (T0318)D334.CB) [> 4.6879 = 7.8131 < 10.1571] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)Q262.CB, (T0318)T333.CB) [> 2.4083 = 4.0138 < 5.2180] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)Q262.CB, (T0318)N332.CB) [> 2.8774 = 4.7956 < 6.2343] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L261.CB, (T0318)T333.CB) [> 2.8705 = 4.7841 < 6.2193] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L261.CB, (T0318)P316.CB) [> 3.6523 = 6.0872 < 7.9133] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L261.CB, (T0318)K315.CB) [> 3.4983 = 5.8304 < 7.5796] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L261.CB, (T0318)N314.CB) [> 4.0445 = 6.7409 < 8.7631] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L261.CB, (T0318)A313.CB) [> 3.2829 = 5.4715 < 7.1130] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L261.CB, (T0318)V309.CB) [> 3.3890 = 5.6484 < 7.3429] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)G260.CA, (T0318)E336.CB) [> 4.6071 = 7.6785 < 9.9821] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)E329.CB, (T0318)K422.CB) [> 3.1139 = 5.1899 < 6.7469] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)E329.CB, (T0318)M421.CB) [> 4.4123 = 7.3539 < 9.5601] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)E329.CB, (T0318)A419.CB) [> 2.3901 = 3.9836 < 5.1786] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V328.CB, (T0318)N423.CB) [> 3.2818 = 5.4697 < 7.1106] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V328.CB, (T0318)K422.CB) [> 4.5181 = 7.5301 < 9.7892] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V328.CB, (T0318)M421.CB) [> 3.3641 = 5.6069 < 7.2889] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V328.CB, (T0318)D420.CB) [> 4.2733 = 7.1221 < 9.2588] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V328.CB, (T0318)A419.CB) [> 3.4592 = 5.7653 < 7.4948] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V328.CB, (T0318)A342.CB) [> 4.1300 = 6.8833 < 8.9483] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)V328.CB, (T0318)L339.CB) [> 3.9318 = 6.5531 < 8.5190] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)T327.CB, (T0318)M421.CB) [> 4.5396 = 7.5660 < 9.8358] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)T327.CB, (T0318)D420.CB) [> 2.9193 = 4.8656 < 6.3253] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)T327.CB, (T0318)A419.CB) [> 2.3179 = 3.8631 < 5.0221] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K326.CB, (T0318)A443.CB) [> 4.0469 = 6.7449 < 8.7683] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K326.CB, (T0318)M421.CB) [> 3.8491 = 6.4152 < 8.3397] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I319.CB, (T0318)E329.CB) [> 2.9128 = 4.8547 < 6.3111] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I319.CB, (T0318)A419.CB) [> 2.7494 = 4.5823 < 5.9569] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I320.CB, (T0318)I330.CB) [> 3.6586 = 6.0977 < 7.9270] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)I320.CB, (T0318)L339.CB) [> 4.0940 = 6.8233 < 8.8703] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M322.CB, (T0318)A342.CB) [> 2.9592 = 4.9319 < 6.4115] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M322.CB, (T0318)D343.CB) [> 3.5042 = 5.8403 < 7.5923] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M322.CB, (T0318)F346.CB) [> 3.9777 = 6.6296 < 8.6185] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)M322.CB, (T0318)H444.CB) [> 4.0773 = 6.7955 < 8.8341] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)L323.CB, (T0318)A342.CB) [> 4.5350 = 7.5583 < 9.8258] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)S324.CB, (T0318)F346.CB) [> 2.7433 = 4.5721 < 5.9438] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)S324.CB, (T0318)H444.CB) [> 3.5704 = 5.9507 < 7.7359] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)K326.CB, (T0318)D420.CB) [> 2.6957 = 4.4929 < 5.8408] w=0.2602 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)Y347.CB) [> 4.2456 = 7.0760 < 9.1988] w=0.2535 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)M276.CB) [> 4.5957 = 7.6594 < 9.9573] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)M272.CB) [> 3.6639 = 6.1065 < 7.9384] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)A279.CB) [> 4.3672 = 7.2787 < 9.4623] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)M276.CB) [> 2.7323 = 4.5539 < 5.9201] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)E192.CB) [> 4.4105 = 7.3509 < 9.5561] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)A280.CB) [> 3.1924 = 5.3206 < 6.9168] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)G277.CA) [> 3.8467 = 6.4111 < 8.3344] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)M276.CB) [> 3.0496 = 5.0827 < 6.6075] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)V161.CB, (T0318)A280.CB) [> 4.7130 = 7.8549 < 10.2114] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)A160.CB, (T0318)A280.CB) [> 2.9036 = 4.8393 < 6.2911] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)T156.CB, (T0318)E284.CB) [> 4.5581 = 7.5968 < 9.8758] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)L155.CB, (T0318)A288.CB) [> 3.4287 = 5.7145 < 7.4289] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)L155.CB, (T0318)A285.CB) [> 3.6977 = 6.1628 < 8.0116] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)D153.CB, (T0318)A288.CB) [> 2.9537 = 4.9229 < 6.3998] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)M379.CB) [> 4.0027 = 6.6711 < 8.6724] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)E306.CB, (T0318)V345.CB) [> 4.1197 = 6.8662 < 8.9261] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)V305.CB, (T0318)Y347.CB) [> 4.6825 = 7.8042 < 10.1454] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)I304.CB, (T0318)Y347.CB) [> 4.6445 = 7.7409 < 10.0632] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)V345.CB) [> 2.8330 = 4.7217 < 6.1382] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)V345.CB) [> 4.7311 = 7.8852 < 10.2508] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)S202.CB, (T0318)A300.CB) [> 4.6000 = 7.6667 < 9.9668] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)N307.CB) [> 4.0126 = 6.6877 < 8.6940] w=0.2533 to align
# Constraint # added constraint: constraint((T0318)T265.CB, (T0318)N307.CB) [> 4.1749 = 6.9581 < 9.0456] w=0.2531 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)S477.CB) [> 3.1270 = 5.2116 < 6.7751] w=0.2505 to align
# Constraint # added constraint: constraint((T0318)M360.CB, (T0318)H455.CB) [> 3.9084 = 6.5140 < 8.4682] w=0.2498 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)L302.CB) [> 4.3342 = 7.2237 < 9.3908] w=0.2481 to align
# Constraint # added constraint: constraint((T0318)K273.CB, (T0318)L363.CB) [> 4.6777 = 7.7961 < 10.1349] w=0.2466 to align
# Constraint # added constraint: constraint((T0318)D178.CB, (T0318)R274.CB) [> 4.2055 = 7.0092 < 9.1119] w=0.2463 to align
# Constraint # added constraint: constraint((T0318)R338.CB, (T0318)G438.CA) [> 3.9298 = 6.5497 < 8.5147] w=0.2457 to align
# Constraint # added constraint: constraint((T0318)G393.CA, (T0318)L479.CB) [> 4.2120 = 7.0200 < 9.1260] w=0.2429 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)N307.CB) [> 3.0933 = 5.1556 < 6.7022] w=0.2421 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)C303.CB) [> 4.5442 = 7.5737 < 9.8459] w=0.2421 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)K264.CB) [> 3.8800 = 6.4666 < 8.4066] w=0.2390 to align
# Constraint # added constraint: constraint((T0318)L113.CB, (T0318)C152.CB) [> 3.4716 = 5.7859 < 7.5217] w=0.2385 to align
# Constraint # added constraint: constraint((T0318)E116.CB, (T0318)D159.CB) [> 4.4701 = 7.4501 < 9.6852] w=0.2385 to align
# Constraint # added constraint: constraint((T0318)F410.CB, (T0318)L439.CB) [> 2.6466 = 4.4110 < 5.7344] w=0.2385 to align
# Constraint # added constraint: constraint((T0318)G412.CA, (T0318)N425.CB) [> 3.2636 = 5.4392 < 7.0710] w=0.2385 to align
# Constraint # added constraint: constraint((T0318)I263.CB, (T0318)M276.CB) [> 4.1280 = 6.8800 < 8.9440] w=0.2357 to align
# Constraint # added constraint: constraint((T0318)V124.CB, (T0318)S167.CB) [> 4.2513 = 7.0855 < 9.2112] w=0.2347 to align
# Constraint # added constraint: constraint((T0318)K349.CB, (T0318)L451.CB) [> 4.7015 = 7.8359 < 10.1866] w=0.2343 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)I357.CB) [> 4.2168 = 7.0280 < 9.1364] w=0.2341 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)I304.CB) [> 4.0503 = 6.7505 < 8.7757] w=0.2333 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)F358.CB) [> 4.5225 = 7.5375 < 9.7988] w=0.2308 to align
# Constraint # added constraint: constraint((T0318)N182.CB, (T0318)V255.CB) [> 3.3220 = 5.5367 < 7.1977] w=0.2299 to align
# Constraint # added constraint: constraint((T0318)V305.CB, (T0318)D343.CB) [> 2.5417 = 4.2362 < 5.5071] w=0.2282 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)D343.CB) [> 4.4919 = 7.4865 < 9.7325] w=0.2278 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)F294.CB) [> 4.4377 = 7.3962 < 9.6150] w=0.2278 to align
# Constraint # added constraint: constraint((T0318)K349.CB, (T0318)G450.CA) [> 4.4558 = 7.4264 < 9.6543] w=0.2278 to align
# Constraint # added constraint: constraint((T0318)K264.CB, (T0318)N307.CB) [> 3.2380 = 5.3967 < 7.0157] w=0.2253 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)A474.CB) [> 4.0141 = 6.6901 < 8.6972] w=0.2242 to align
# Constraint # added constraint: constraint((T0318)E284.CB, (T0318)S477.CB) [> 3.3142 = 5.5237 < 7.1809] w=0.2212 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)S477.CB) [> 3.0026 = 5.0044 < 6.5057] w=0.2212 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)L283.CB) [> 4.6311 = 7.7186 < 10.0341] w=0.2211 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)A280.CB) [> 4.5960 = 7.6600 < 9.9580] w=0.2211 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)P433.CB) [> 4.1970 = 6.9950 < 9.0936] w=0.2188 to align
# Constraint # added constraint: constraint((T0318)S396.CB, (T0318)T478.CB) [> 3.0667 = 5.1112 < 6.6445] w=0.2176 to align
# Constraint # added constraint: constraint((T0318)R274.CB, (T0318)E463.CB) [> 3.9631 = 6.6052 < 8.5868] w=0.2168 to align
# Constraint # added constraint: constraint((T0318)L121.CB, (T0318)F162.CB) [> 3.9623 = 6.6038 < 8.5850] w=0.2168 to align
# Constraint # added constraint: constraint((T0318)L409.CB, (T0318)A435.CB) [> 2.6633 = 4.4389 < 5.7705] w=0.2168 to align
# Constraint # added constraint: constraint((T0318)F410.CB, (T0318)G442.CA) [> 4.6354 = 7.7256 < 10.0433] w=0.2168 to align
# Constraint # added constraint: constraint((T0318)E284.CB, (T0318)P473.CB) [> 3.1623 = 5.2705 < 6.8517] w=0.2159 to align
# Constraint # added constraint: constraint((T0318)L289.CB, (T0318)L480.CB) [> 3.3971 = 5.6619 < 7.3605] w=0.2159 to align
# Constraint # added constraint: constraint((T0318)Q296.CB, (T0318)Y483.CB) [> 3.9319 = 6.5531 < 8.5191] w=0.2159 to align
# Constraint # added constraint: constraint((T0318)G393.CA, (T0318)L475.CB) [> 3.0555 = 5.0925 < 6.6203] w=0.2159 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)A300.CB) [> 4.3615 = 7.2691 < 9.4499] w=0.2155 to align
# Constraint # added constraint: constraint((T0318)D413.CB, (T0318)L440.CB) [> 3.1281 = 5.2134 < 6.7775] w=0.2147 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)I458.CB) [> 3.9541 = 6.5901 < 8.5672] w=0.2141 to align
# Constraint # added constraint: constraint((T0318)A279.CB, (T0318)C303.CB) [> 4.3718 = 7.2863 < 9.4722] w=0.2133 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)P270.CB) [> 4.1315 = 6.8859 < 8.9516] w=0.2124 to align
# Constraint # added constraint: constraint((T0318)T179.CB, (T0318)T265.CB) [> 3.5726 = 5.9543 < 7.7406] w=0.2124 to align
# Constraint # added constraint: constraint((T0318)S243.CB, (T0318)Q296.CB) [> 2.9808 = 4.9681 < 6.4585] w=0.2123 to align
# Constraint # added constraint: constraint((T0318)R373.CB, (T0318)V464.CB) [> 4.3365 = 7.2276 < 9.3958] w=0.2122 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)D359.CB) [> 4.1837 = 6.9728 < 9.0647] w=0.2118 to align
# Constraint # added constraint: constraint((T0318)D318.CB, (T0318)V345.CB) [> 3.0331 = 5.0553 < 6.5718] w=0.2118 to align
# Constraint # added constraint: constraint((T0318)D318.CB, (T0318)G344.CA) [> 3.9526 = 6.5876 < 8.5639] w=0.2118 to align
# Constraint # added constraint: constraint((T0318)N308.CB, (T0318)D343.CB) [> 2.8519 = 4.7532 < 6.1791] w=0.2101 to align
# Constraint # added constraint: constraint((T0318)E306.CB, (T0318)D343.CB) [> 4.3616 = 7.2693 < 9.4501] w=0.2101 to align
# Constraint # added constraint: constraint((T0318)I304.CB, (T0318)D343.CB) [> 4.0662 = 6.7771 < 8.8102] w=0.2101 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)D343.CB) [> 3.9523 = 6.5871 < 8.5633] w=0.2101 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)A474.CB) [> 2.9844 = 4.9739 < 6.4661] w=0.2097 to align
# Constraint # added constraint: constraint((T0318)L440.CB, (T0318)W453.CB) [> 2.6269 = 4.3782 < 5.6917] w=0.2096 to align
# Constraint # added constraint: constraint((T0318)T380.CB, (T0318)P432.CB) [> 3.5917 = 5.9861 < 7.7820] w=0.2096 to align
# Constraint # added constraint: constraint((T0318)G438.CA, (T0318)W453.CB) [> 4.1234 = 6.8724 < 8.9341] w=0.2088 to align
# Constraint # added constraint: constraint((T0318)G393.CA, (T0318)L414.CB) [> 3.3029 = 5.5048 < 7.1563] w=0.2088 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)G268.CA) [> 4.1276 = 6.8794 < 8.9432] w=0.2062 to align
# Constraint # added constraint: constraint((T0318)L184.CB, (T0318)T229.CB) [> 3.2888 = 5.4813 < 7.1257] w=0.2028 to align
# Constraint # added constraint: constraint((T0318)L374.CB, (T0318)A401.CB) [> 4.4563 = 7.4271 < 9.6553] w=0.2017 to align
# Constraint # added constraint: constraint((T0318)H375.CB, (T0318)L399.CB) [> 2.3812 = 3.9686 < 5.1592] w=0.2017 to align
# Constraint # added constraint: constraint((T0318)L374.CB, (T0318)L399.CB) [> 3.9571 = 6.5952 < 8.5737] w=0.2017 to align
# Constraint # added constraint: constraint((T0318)L363.CB, (T0318)A459.CB) [> 3.4678 = 5.7797 < 7.5136] w=0.2017 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)I458.CB) [> 3.6741 = 6.1236 < 7.9607] w=0.2017 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)I458.CB) [> 4.1019 = 6.8365 < 8.8875] w=0.2017 to align
# Constraint # added constraint: constraint((T0318)T380.CB, (T0318)F405.CB) [> 4.3306 = 7.2176 < 9.3829] w=0.1995 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)P433.CB) [> 4.1171 = 6.8618 < 8.9204] w=0.1989 to align
# Constraint # added constraint: constraint((T0318)E245.CB, (T0318)F294.CB) [> 3.5084 = 5.8474 < 7.6016] w=0.1984 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)V254.CB) [> 4.3842 = 7.3070 < 9.4992] w=0.1977 to align
# Constraint # added constraint: constraint((T0318)I263.CB, (T0318)I304.CB) [> 3.6628 = 6.1047 < 7.9361] w=0.1976 to align
# Constraint # added constraint: constraint((T0318)Q367.CB, (T0318)I458.CB) [> 4.7796 = 7.9660 < 10.3558] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)Q367.CB, (T0318)D457.CB) [> 2.5628 = 4.2713 < 5.5527] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)T364.CB, (T0318)A437.CB) [> 3.0803 = 5.1338 < 6.6739] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)T364.CB, (T0318)S434.CB) [> 2.8298 = 4.7163 < 6.1312] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)L363.CB, (T0318)G438.CA) [> 4.6657 = 7.7762 < 10.1091] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)L363.CB, (T0318)A437.CB) [> 3.2571 = 5.4285 < 7.0571] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)L363.CB, (T0318)S434.CB) [> 4.3526 = 7.2543 < 9.4306] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)M360.CB, (T0318)I458.CB) [> 3.4902 = 5.8170 < 7.5622] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)S371.CB, (T0318)A401.CB) [> 3.4683 = 5.7806 < 7.5147] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)R373.CB, (T0318)P461.CB) [> 3.3304 = 5.5507 < 7.2159] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)L374.CB, (T0318)A460.CB) [> 4.6266 = 7.7111 < 10.0244] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)S434.CB, (T0318)D457.CB) [> 3.3063 = 5.5104 < 7.1636] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)A437.CB, (T0318)D457.CB) [> 4.3802 = 7.3004 < 9.4904] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G438.CA, (T0318)D457.CB) [> 4.5917 = 7.6528 < 9.9486] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)F34.CB, (T0318)R64.CB) [> 4.3026 = 7.1710 < 9.3223] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)Y117.CB, (T0318)D159.CB) [> 2.4109 = 4.0181 < 5.2236] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G219.CA, (T0318)L323.CB) [> 4.6639 = 7.7732 < 10.1052] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G224.CA, (T0318)N308.CB) [> 4.6461 = 7.7435 < 10.0666] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)Y483.CB) [> 4.2834 = 7.1390 < 9.2807] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)L363.CB) [> 4.0550 = 6.7584 < 8.7859] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)E306.CB) [> 4.7052 = 7.8419 < 10.1945] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G259.CA, (T0318)M272.CB) [> 4.7255 = 7.8759 < 10.2386] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)D317.CB, (T0318)I418.CB) [> 4.3861 = 7.3102 < 9.5032] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)I319.CB, (T0318)I418.CB) [> 3.2358 = 5.3929 < 7.0108] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)E329.CB, (T0318)S416.CB) [> 3.0652 = 5.1087 < 6.6413] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)E329.CB, (T0318)I418.CB) [> 2.7880 = 4.6466 < 6.0406] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G337.CA, (T0318)L363.CB) [> 3.7901 = 6.3169 < 8.2119] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)R338.CB, (T0318)L363.CB) [> 4.1487 = 6.9145 < 8.9888] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)A361.CB) [> 4.7030 = 7.8384 < 10.1899] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)L302.CB) [> 4.5053 = 7.5088 < 9.7615] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)D343.CB) [> 4.0742 = 6.7903 < 8.8274] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)K326.CB, (T0318)A342.CB) [> 4.6494 = 7.7490 < 10.0737] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)K326.CB, (T0318)A419.CB) [> 4.7152 = 7.8587 < 10.2163] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)L370.CB, (T0318)A460.CB) [> 4.3278 = 7.2129 < 9.3768] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G412.CA, (T0318)K422.CB) [> 4.4864 = 7.4774 < 9.7206] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G412.CA, (T0318)V436.CB) [> 3.7894 = 6.3158 < 8.2105] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)A125.CB, (T0318)T164.CB) [> 3.6833 = 6.1388 < 7.9805] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)L20.CB, (T0318)A115.CB) [> 3.5963 = 5.9939 < 7.7920] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G197.CA, (T0318)H238.CB) [> 4.7598 = 7.9329 < 10.3128] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)E211.CB, (T0318)F233.CB) [> 3.9527 = 6.5878 < 8.5641] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)G260.CA, (T0318)N314.CB) [> 4.2201 = 7.0336 < 9.1437] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)T258.CB, (T0318)E306.CB) [> 4.5443 = 7.5739 < 9.8460] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)C303.CB) [> 4.4981 = 7.4969 < 9.7460] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)I220.CB, (T0318)A342.CB) [> 4.6104 = 7.6839 < 9.9891] w=0.1952 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)F476.CB) [> 4.2466 = 7.0777 < 9.2011] w=0.1943 to align
# Constraint # added constraint: constraint((T0318)L298.CB, (T0318)L480.CB) [> 4.2168 = 7.0280 < 9.1364] w=0.1943 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)F476.CB) [> 4.4983 = 7.4971 < 9.7463] w=0.1943 to align
# Constraint # added constraint: constraint((T0318)E388.CB, (T0318)L479.CB) [> 3.4687 = 5.7812 < 7.5156] w=0.1943 to align
# Constraint # added constraint: constraint((T0318)E388.CB, (T0318)Y483.CB) [> 4.1901 = 6.9834 < 9.0785] w=0.1943 to align
# Constraint # added constraint: constraint((T0318)A392.CB, (T0318)L475.CB) [> 3.0463 = 5.0771 < 6.6002] w=0.1943 to align
# Constraint # added constraint: constraint((T0318)L20.CB, (T0318)Y69.CB) [> 4.3861 = 7.3101 < 9.5031] w=0.1938 to align
# Constraint # added constraint: constraint((T0318)S54.CB, (T0318)G63.CA) [> 3.6374 = 6.0624 < 7.8811] w=0.1938 to align
# Constraint # added constraint: constraint((T0318)L121.CB, (T0318)S167.CB) [> 3.8651 = 6.4418 < 8.3743] w=0.1938 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)T364.CB) [> 2.9697 = 4.9495 < 6.4344] w=0.1936 to align
# Constraint # added constraint: constraint((T0318)A126.CB, (T0318)V170.CB) [> 3.9721 = 6.6202 < 8.6063] w=0.1925 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)A435.CB) [> 3.8852 = 6.4753 < 8.4179] w=0.1924 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)L439.CB) [> 3.7741 = 6.2902 < 8.1773] w=0.1924 to align
# Constraint # added constraint: constraint((T0318)D318.CB, (T0318)D343.CB) [> 3.6513 = 6.0855 < 7.9111] w=0.1922 to align
# Constraint # added constraint: constraint((T0318)T380.CB, (T0318)M403.CB) [> 3.9334 = 6.5556 < 8.5223] w=0.1919 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)L404.CB) [> 4.6734 = 7.7891 < 10.1258] w=0.1919 to align
# Constraint # added constraint: constraint((T0318)K273.CB, (T0318)G372.CA) [> 4.3872 = 7.3120 < 9.5056] w=0.1919 to align
# Constraint # added constraint: constraint((T0318)K273.CB, (T0318)S371.CB) [> 3.5106 = 5.8509 < 7.6062] w=0.1919 to align
# Constraint # added constraint: constraint((T0318)A90.CB, (T0318)H123.CB) [> 3.3601 = 5.6002 < 7.2802] w=0.1886 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)L352.CB) [> 3.4035 = 5.6725 < 7.3742] w=0.1867 to align
# Constraint # added constraint: constraint((T0318)R373.CB, (T0318)E463.CB) [> 3.9185 = 6.5308 < 8.4900] w=0.1851 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)E306.CB) [> 4.0599 = 6.7666 < 8.7965] w=0.1845 to align
# Constraint # added constraint: constraint((T0318)L363.CB, (T0318)L456.CB) [> 3.7326 = 6.2210 < 8.0873] w=0.1833 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)L480.CB) [> 3.9434 = 6.5724 < 8.5441] w=0.1770 to align
# Constraint # added constraint: constraint((T0318)Q296.CB, (T0318)T484.CB) [> 2.8946 = 4.8244 < 6.2717] w=0.1769 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)A435.CB) [> 4.2409 = 7.0681 < 9.1885] w=0.1742 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)L475.CB) [> 3.8574 = 6.4290 < 8.3576] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)W52.CB, (T0318)H65.CB) [> 3.5421 = 5.9035 < 7.6746] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)W52.CB, (T0318)P66.CB) [> 3.9428 = 6.5714 < 8.5428] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)N53.CB, (T0318)G63.CA) [> 3.8136 = 6.3560 < 8.2628] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)N53.CB, (T0318)R64.CB) [> 3.2696 = 5.4494 < 7.0842] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)N53.CB, (T0318)H65.CB) [> 4.0490 = 6.7484 < 8.7729] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)N53.CB, (T0318)P66.CB) [> 4.3061 = 7.1768 < 9.3299] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)Y117.CB, (T0318)A160.CB) [> 2.8046 = 4.6743 < 6.0766] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)Y117.CB, (T0318)L163.CB) [> 3.9883 = 6.6471 < 8.6412] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)P118.CB, (T0318)A160.CB) [> 4.3155 = 7.1926 < 9.3503] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)P118.CB, (T0318)F162.CB) [> 3.2215 = 5.3691 < 6.9799] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)S51.CB, (T0318)P66.CB) [> 3.4230 = 5.7049 < 7.4164] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)S51.CB, (T0318)H65.CB) [> 4.0288 = 6.7147 < 8.7291] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)D50.CB, (T0318)H68.CB) [> 3.6821 = 6.1368 < 7.9779] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)F34.CB, (T0318)P66.CB) [> 4.4259 = 7.3765 < 9.5894] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)K26.CB, (T0318)R64.CB) [> 4.5750 = 7.6249 < 9.9124] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)G24.CA, (T0318)F34.CB) [> 4.6267 = 7.7112 < 10.0245] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)V23.CB, (T0318)F34.CB) [> 4.3407 = 7.2346 < 9.4049] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)S19.CB, (T0318)E35.CB) [> 4.4425 = 7.4042 < 9.6255] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)A366.CB, (T0318)D430.CB) [> 4.4393 = 7.3988 < 9.6185] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)P461.CB, (T0318)G472.CA) [> 4.0003 = 6.6671 < 8.6673] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)P461.CB, (T0318)Y471.CB) [> 2.7135 = 4.5225 < 5.8793] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)N425.CB, (T0318)L439.CB) [> 4.5995 = 7.6658 < 9.9656] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)G397.CA, (T0318)L475.CB) [> 4.6317 = 7.7194 < 10.0353] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)S396.CB, (T0318)L475.CB) [> 2.9829 = 4.9715 < 6.4630] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)S396.CB, (T0318)A474.CB) [> 2.5400 = 4.2333 < 5.5033] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)A392.CB, (T0318)F476.CB) [> 4.6285 = 7.7141 < 10.0284] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)Y471.CB) [> 4.5241 = 7.5402 < 9.8022] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)A366.CB, (T0318)P433.CB) [> 1.7230 = 2.8716 < 3.7331] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)A366.CB, (T0318)P432.CB) [> 4.2107 = 7.0179 < 9.1232] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)G365.CA, (T0318)P433.CB) [> 4.1278 = 6.8797 < 8.9436] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)Q296.CB, (T0318)L480.CB) [> 4.0682 = 6.7803 < 8.8143] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)A126.CB, (T0318)S167.CB) [> 3.2320 = 5.3867 < 7.0027] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)A174.CB, (T0318)G468.CA) [> 3.2192 = 5.3653 < 6.9749] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)A174.CB, (T0318)T469.CB) [> 4.0823 = 6.8038 < 8.8449] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)D178.CB, (T0318)G468.CA) [> 3.3134 = 5.5224 < 7.1791] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)R274.CB, (T0318)G468.CA) [> 3.6914 = 6.1523 < 7.9981] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)G470.CA) [> 4.3862 = 7.3103 < 9.5034] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)A280.CB, (T0318)G470.CA) [> 4.0017 = 6.6696 < 8.6704] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)G470.CA) [> 3.7748 = 6.2914 < 8.1788] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)E284.CB, (T0318)G470.CA) [> 4.4691 = 7.4484 < 9.6830] w=0.1735 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)C301.CB) [> 4.6906 = 7.8177 < 10.1630] w=0.1734 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)R338.CB) [> 2.8476 = 4.7459 < 6.1697] w=0.1708 to align
# Constraint # added constraint: constraint((T0318)H299.CB, (T0318)F358.CB) [> 3.8907 = 6.4845 < 8.4299] w=0.1701 to align
# Constraint # added constraint: constraint((T0318)A300.CB, (T0318)F358.CB) [> 3.6903 = 6.1504 < 7.9956] w=0.1701 to align
# Constraint # added constraint: constraint((T0318)E388.CB, (T0318)L454.CB) [> 4.5319 = 7.5531 < 9.8191] w=0.1700 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)G277.CA) [> 4.2967 = 7.1612 < 9.3095] w=0.1700 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)I263.CB) [> 3.2741 = 5.4568 < 7.0938] w=0.1700 to align
# Constraint # added constraint: constraint((T0318)I183.CB, (T0318)I263.CB) [> 3.3439 = 5.5731 < 7.2451] w=0.1700 to align
# Constraint # added constraint: constraint((T0318)I183.CB, (T0318)K264.CB) [> 3.9210 = 6.5350 < 8.4954] w=0.1700 to align
# Constraint # added constraint: constraint((T0318)I183.CB, (T0318)M269.CB) [> 3.1080 = 5.1800 < 6.7340] w=0.1700 to align
# Constraint # added constraint: constraint((T0318)I183.CB, (T0318)T229.CB) [> 1.9754 = 3.2923 < 4.2800] w=0.1689 to align
# Constraint # added constraint: constraint((T0318)I183.CB, (T0318)G227.CA) [> 4.2708 = 7.1181 < 9.2535] w=0.1689 to align
# Constraint # added constraint: constraint((T0318)E306.CB, (T0318)D318.CB) [> 3.3513 = 5.5854 < 7.2611] w=0.1689 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)D318.CB) [> 4.5899 = 7.6499 < 9.9449] w=0.1689 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)L370.CB) [> 2.8545 = 4.7575 < 6.1847] w=0.1689 to align
# Constraint # added constraint: constraint((T0318)G84.CA, (T0318)I127.CB) [> 4.3712 = 7.2854 < 9.4710] w=0.1681 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)I458.CB) [> 4.4238 = 7.3730 < 9.5849] w=0.1676 to align
# Constraint # added constraint: constraint((T0318)K273.CB, (T0318)L370.CB) [> 2.9923 = 4.9872 < 6.4833] w=0.1666 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)L302.CB) [> 4.1034 = 6.8390 < 8.8906] w=0.1664 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)V305.CB) [> 4.0010 = 6.6683 < 8.6688] w=0.1661 to align
# Constraint # added constraint: constraint((T0318)A128.CB, (T0318)L144.CB) [> 3.4132 = 5.6887 < 7.3953] w=0.1651 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)I304.CB) [> 4.4104 = 7.3506 < 9.5558] w=0.1648 to align
# Constraint # added constraint: constraint((T0318)N182.CB, (T0318)L261.CB) [> 3.9660 = 6.6101 < 8.5931] w=0.1633 to align
# Constraint # added constraint: constraint((T0318)P461.CB, (T0318)L479.CB) [> 3.6750 = 6.1249 < 7.9624] w=0.1617 to align
# Constraint # added constraint: constraint((T0318)N381.CB, (T0318)K422.CB) [> 3.8817 = 6.4695 < 8.4103] w=0.1599 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)P432.CB) [> 3.2647 = 5.4411 < 7.0735] w=0.1580 to align
# Constraint # added constraint: constraint((T0318)G372.CA, (T0318)I458.CB) [> 4.2925 = 7.1542 < 9.3004] w=0.1580 to align
# Constraint # added constraint: constraint((T0318)I263.CB, (T0318)A279.CB) [> 3.8108 = 6.3513 < 8.2566] w=0.1569 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)I263.CB) [> 4.3039 = 7.1733 < 9.3252] w=0.1569 to align
# Constraint # added constraint: constraint((T0318)I458.CB, (T0318)G472.CA) [> 4.0462 = 6.7436 < 8.7668] w=0.1526 to align
# Constraint # added constraint: constraint((T0318)G393.CA, (T0318)G412.CA) [> 3.5114 = 5.8524 < 7.6081] w=0.1518 to align
# Constraint # added constraint: constraint((T0318)A462.CB, (T0318)Y471.CB) [> 4.2598 = 7.0997 < 9.2296] w=0.1518 to align
# Constraint # added constraint: constraint((T0318)T18.CB, (T0318)A72.CB) [> 4.2458 = 7.0763 < 9.1992] w=0.1518 to align
# Constraint # added constraint: constraint((T0318)K44.CB, (T0318)H68.CB) [> 4.4760 = 7.4601 < 9.6981] w=0.1518 to align
# Constraint # added constraint: constraint((T0318)L67.CB, (T0318)T86.CB) [> 3.1665 = 5.2775 < 6.8608] w=0.1518 to align
# Constraint # added constraint: constraint((T0318)F134.CB, (T0318)P180.CB) [> 4.4152 = 7.3586 < 9.5662] w=0.1518 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)G472.CA) [> 4.4365 = 7.3941 < 9.6124] w=0.1518 to align
# Constraint # added constraint: constraint((T0318)L184.CB, (T0318)P231.CB) [> 2.6162 = 4.3603 < 5.6684] w=0.1517 to align
# Constraint # added constraint: constraint((T0318)L298.CB, (T0318)A354.CB) [> 3.0621 = 5.1034 < 6.6344] w=0.1506 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)T258.CB) [> 4.0618 = 6.7697 < 8.8006] w=0.1498 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)G259.CA) [> 4.2974 = 7.1624 < 9.3111] w=0.1498 to align
# Constraint # added constraint: constraint((T0318)L113.CB, (T0318)V151.CB) [> 4.1307 = 6.8844 < 8.9497] w=0.1497 to align
# Constraint # added constraint: constraint((T0318)V112.CB, (T0318)C152.CB) [> 3.1411 = 5.2351 < 6.8056] w=0.1497 to align
# Constraint # added constraint: constraint((T0318)F111.CB, (T0318)C152.CB) [> 3.4143 = 5.6905 < 7.3977] w=0.1497 to align
# Constraint # added constraint: constraint((T0318)F111.CB, (T0318)N147.CB) [> 3.6955 = 6.1591 < 8.0068] w=0.1497 to align
# Constraint # added constraint: constraint((T0318)F111.CB, (T0318)V146.CB) [> 3.6805 = 6.1342 < 7.9744] w=0.1497 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)S434.CB) [> 4.4532 = 7.4219 < 9.6485] w=0.1495 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)A459.CB) [> 4.2647 = 7.1079 < 9.2402] w=0.1486 to align
# Constraint # added constraint: constraint((T0318)F111.CB, (T0318)D149.CB) [> 3.6936 = 6.1559 < 8.0027] w=0.1475 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)M360.CB) [> 2.8636 = 4.7727 < 6.2045] w=0.1468 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)D359.CB) [> 4.3000 = 7.1667 < 9.3167] w=0.1468 to align
# Constraint # added constraint: constraint((T0318)L302.CB, (T0318)M360.CB) [> 4.3110 = 7.1850 < 9.3405] w=0.1468 to align
# Constraint # added constraint: constraint((T0318)L302.CB, (T0318)D359.CB) [> 3.7420 = 6.2366 < 8.1076] w=0.1468 to align
# Constraint # added constraint: constraint((T0318)L302.CB, (T0318)F358.CB) [> 4.6058 = 7.6764 < 9.9792] w=0.1468 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)F358.CB) [> 3.6231 = 6.0385 < 7.8500] w=0.1468 to align
# Constraint # added constraint: constraint((T0318)F131.CB, (T0318)V146.CB) [> 3.6056 = 6.0093 < 7.8120] w=0.1467 to align
# Constraint # added constraint: constraint((T0318)S371.CB, (T0318)I458.CB) [> 3.2353 = 5.3921 < 7.0097] w=0.1464 to align
# Constraint # added constraint: constraint((T0318)V124.CB, (T0318)I148.CB) [> 4.2477 = 7.0796 < 9.2034] w=0.1443 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)G481.CA) [> 3.5798 = 5.9664 < 7.7564] w=0.1421 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)C303.CB) [> 4.0014 = 6.6690 < 8.6697] w=0.1420 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)A435.CB) [> 3.2278 = 5.3797 < 6.9937] w=0.1402 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)P432.CB) [> 2.7871 = 4.6452 < 6.0388] w=0.1398 to align
# Constraint # added constraint: constraint((T0318)V305.CB, (T0318)G337.CA) [> 3.5504 = 5.9173 < 7.6926] w=0.1395 to align
# Constraint # added constraint: constraint((T0318)V305.CB, (T0318)E336.CB) [> 3.3345 = 5.5575 < 7.2247] w=0.1395 to align
# Constraint # added constraint: constraint((T0318)V124.CB, (T0318)L166.CB) [> 4.2247 = 7.0412 < 9.1535] w=0.1392 to align
# Constraint # added constraint: constraint((T0318)M272.CB, (T0318)T364.CB) [> 4.4942 = 7.4904 < 9.7375] w=0.1391 to align
# Constraint # added constraint: constraint((T0318)G63.CA, (T0318)P99.CB) [> 4.0316 = 6.7194 < 8.7352] w=0.1384 to align
# Constraint # added constraint: constraint((T0318)L341.CB, (T0318)L363.CB) [> 3.9723 = 6.6205 < 8.6067] w=0.1375 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)L439.CB) [> 4.6422 = 7.7370 < 10.0581] w=0.1359 to align
# Constraint # added constraint: constraint((T0318)Y69.CB, (T0318)Y102.CB) [> 3.4455 = 5.7425 < 7.4653] w=0.1357 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)I263.CB) [> 3.7578 = 6.2630 < 8.1419] w=0.1353 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)S434.CB) [> 4.6995 = 7.8325 < 10.1822] w=0.1353 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)E329.CB) [> 3.8055 = 6.3425 < 8.2452] w=0.1340 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)E329.CB) [> 4.2784 = 7.1307 < 9.2699] w=0.1340 to align
# Constraint # added constraint: constraint((T0318)Q262.CB, (T0318)N307.CB) [> 3.4873 = 5.8121 < 7.5557] w=0.1338 to align
# Constraint # added constraint: constraint((T0318)K394.CB, (T0318)G412.CA) [> 3.4152 = 5.6919 < 7.3995] w=0.1337 to align
# Constraint # added constraint: constraint((T0318)T380.CB, (T0318)V436.CB) [> 3.6256 = 6.0427 < 7.8555] w=0.1337 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)A435.CB) [> 3.7908 = 6.3181 < 8.2135] w=0.1337 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)A435.CB) [> 4.5814 = 7.6356 < 9.9263] w=0.1337 to align
# Constraint # added constraint: constraint((T0318)L184.CB, (T0318)N307.CB) [> 3.8744 = 6.4573 < 8.3945] w=0.1336 to align
# Constraint # added constraint: constraint((T0318)L261.CB, (T0318)I304.CB) [> 3.6508 = 6.0846 < 7.9100] w=0.1323 to align
# Constraint # added constraint: constraint((T0318)T200.CB, (T0318)G293.CA) [> 3.6130 = 6.0216 < 7.8281] w=0.1322 to align
# Constraint # added constraint: constraint((T0318)K264.CB, (T0318)D275.CB) [> 4.7744 = 7.9573 < 10.3445] w=0.1312 to align
# Constraint # added constraint: constraint((T0318)T205.CB, (T0318)H238.CB) [> 3.9697 = 6.6161 < 8.6010] w=0.1312 to align
# Constraint # added constraint: constraint((T0318)R373.CB, (T0318)D420.CB) [> 4.0988 = 6.8314 < 8.8808] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)L374.CB, (T0318)I418.CB) [> 4.3368 = 7.2281 < 9.3965] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)H375.CB, (T0318)I418.CB) [> 2.8537 = 4.7562 < 6.1830] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)H375.CB, (T0318)A419.CB) [> 3.3644 = 5.6073 < 7.2895] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)H375.CB, (T0318)D420.CB) [> 2.4097 = 4.0162 < 5.2211] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)I418.CB) [> 3.4838 = 5.8064 < 7.5483] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)A419.CB) [> 3.8173 = 6.3621 < 8.2707] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)I418.CB) [> 4.6743 = 7.7906 < 10.1277] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)A419.CB) [> 2.5479 = 4.2464 < 5.5204] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)D420.CB) [> 4.4289 = 7.3814 < 9.5958] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)A419.CB) [> 4.0515 = 6.7525 < 8.7782] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)D420.CB) [> 2.6772 = 4.4620 < 5.8007] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)D420.CB) [> 4.4241 = 7.3735 < 9.5856] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)G393.CA, (T0318)A419.CB) [> 4.2880 = 7.1467 < 9.2907] w=0.1306 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)I247.CB) [> 4.2162 = 7.0269 < 9.1350] w=0.1302 to align
# Constraint # added constraint: constraint((T0318)L20.CB, (T0318)V112.CB) [> 3.2193 = 5.3654 < 6.9751] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)R129.CB, (T0318)S167.CB) [> 3.7622 = 6.2703 < 8.1514] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)P87.CB, (T0318)A126.CB) [> 2.8441 = 4.7401 < 6.1621] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)T86.CB, (T0318)F114.CB) [> 3.9760 = 6.6268 < 8.6148] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)I458.CB, (T0318)Y471.CB) [> 3.8860 = 6.4767 < 8.4198] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)L20.CB, (T0318)L113.CB) [> 4.5880 = 7.6466 < 9.9406] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)L20.CB, (T0318)F114.CB) [> 3.3171 = 5.5286 < 7.1871] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)I22.CB, (T0318)V112.CB) [> 2.6977 = 4.4962 < 5.8450] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)I22.CB, (T0318)L113.CB) [> 3.9622 = 6.6037 < 8.5849] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)I22.CB, (T0318)F114.CB) [> 4.7099 = 7.8498 < 10.2048] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)S54.CB, (T0318)R64.CB) [> 3.5861 = 5.9768 < 7.7699] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)A61.CB, (T0318)H110.CB) [> 4.4757 = 7.4595 < 9.6974] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)Y69.CB, (T0318)F114.CB) [> 3.4361 = 5.7269 < 7.4449] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)P228.CB, (T0318)N308.CB) [> 4.6781 = 7.7968 < 10.1358] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)A280.CB) [> 4.7372 = 7.8953 < 10.2639] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)K315.CB, (T0318)I330.CB) [> 4.5202 = 7.5336 < 9.7937] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)I320.CB, (T0318)E329.CB) [> 4.7298 = 7.8830 < 10.2480] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)A366.CB, (T0318)A459.CB) [> 4.7253 = 7.8754 < 10.2381] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)L17.CB, (T0318)F45.CB) [> 4.0970 = 6.8284 < 8.8769] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)T47.CB, (T0318)H68.CB) [> 2.8121 = 4.6868 < 6.0928] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)T47.CB, (T0318)E70.CB) [> 2.9876 = 4.9794 < 6.4732] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)A80.CB, (T0318)D119.CB) [> 3.3896 = 5.6493 < 7.3441] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)T364.CB, (T0318)P433.CB) [> 2.9637 = 4.9394 < 6.4213] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)Q367.CB, (T0318)P433.CB) [> 4.5810 = 7.6350 < 9.9255] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)W369.CB, (T0318)P433.CB) [> 4.6379 = 7.7298 < 10.0487] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)M276.CB, (T0318)L302.CB) [> 4.6394 = 7.7323 < 10.0520] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)D359.CB) [> 4.5367 = 7.5612 < 9.8295] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)T327.CB, (T0318)I418.CB) [> 4.5378 = 7.5630 < 9.8319] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)E329.CB, (T0318)S417.CB) [> 4.2045 = 7.0075 < 9.1097] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)A366.CB, (T0318)A435.CB) [> 4.7419 = 7.9031 < 10.2740] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)A368.CB, (T0318)A462.CB) [> 4.7580 = 7.9300 < 10.3090] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)G372.CA, (T0318)P461.CB) [> 4.4480 = 7.4133 < 9.6372] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)D382.CB, (T0318)G448.CA) [> 3.6676 = 6.1126 < 7.9464] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)G412.CA, (T0318)L426.CB) [> 3.0466 = 5.0778 < 6.6011] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)G412.CA, (T0318)M429.CB) [> 4.4991 = 7.4985 < 9.7481] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)K415.CB, (T0318)L426.CB) [> 3.7127 = 6.1878 < 8.0442] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)F111.CB, (T0318)V120.CB) [> 3.3580 = 5.5966 < 7.2756] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)F111.CB, (T0318)V124.CB) [> 3.0908 = 5.1514 < 6.6968] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)Q262.CB, (T0318)A335.CB) [> 4.6577 = 7.7628 < 10.0916] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)V196.CB, (T0318)E284.CB) [> 4.7853 = 7.9755 < 10.3682] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)Y471.CB) [> 4.4184 = 7.3641 < 9.5733] w=0.1301 to align
# Constraint # added constraint: constraint((T0318)M403.CB, (T0318)H455.CB) [> 4.3651 = 7.2752 < 9.4578] w=0.1288 to align
# Constraint # added constraint: constraint((T0318)H65.CB, (T0318)I93.CB) [> 3.4523 = 5.7538 < 7.4799] w=0.1288 to align
# Constraint # added constraint: constraint((T0318)F45.CB, (T0318)L67.CB) [> 4.1481 = 6.9135 < 8.9876] w=0.1288 to align
# Constraint # added constraint: constraint((T0318)H65.CB, (T0318)Y94.CB) [> 4.1119 = 6.8532 < 8.9091] w=0.1288 to align
# Constraint # added constraint: constraint((T0318)S371.CB, (T0318)A459.CB) [> 3.6859 = 6.1432 < 7.9862] w=0.1281 to align
# Constraint # added constraint: constraint((T0318)T265.CB, (T0318)R274.CB) [> 4.3634 = 7.2724 < 9.4541] w=0.1281 to align
# Constraint # added constraint: constraint((T0318)L97.CB, (T0318)V146.CB) [> 3.5940 = 5.9899 < 7.7869] w=0.1280 to align
# Constraint # added constraint: constraint((T0318)V120.CB, (T0318)V151.CB) [> 4.2508 = 7.0847 < 9.2101] w=0.1280 to align
# Constraint # added constraint: constraint((T0318)M276.CB, (T0318)L370.CB) [> 4.7402 = 7.9004 < 10.2705] w=0.1280 to align
# Constraint # added constraint: constraint((T0318)K264.CB, (T0318)C303.CB) [> 4.5002 = 7.5004 < 9.7505] w=0.1268 to align
# Constraint # added constraint: constraint((T0318)K264.CB, (T0318)I304.CB) [> 3.5401 = 5.9001 < 7.6702] w=0.1268 to align
# Constraint # added constraint: constraint((T0318)A90.CB, (T0318)A126.CB) [> 2.6410 = 4.4016 < 5.7221] w=0.1258 to align
# Constraint # added constraint: constraint((T0318)I22.CB, (T0318)A72.CB) [> 3.5320 = 5.8866 < 7.6526] w=0.1249 to align
# Constraint # added constraint: constraint((T0318)A125.CB, (T0318)L166.CB) [> 3.6161 = 6.0269 < 7.8349] w=0.1247 to align
# Constraint # added constraint: constraint((T0318)H91.CB, (T0318)A126.CB) [> 3.2148 = 5.3580 < 6.9654] w=0.1247 to align
# Constraint # added constraint: constraint((T0318)E70.CB, (T0318)D79.CB) [> 4.2871 = 7.1452 < 9.2888] w=0.1247 to align
# Constraint # added constraint: constraint((T0318)F131.CB, (T0318)I148.CB) [> 3.9331 = 6.5552 < 8.5217] w=0.1246 to align
# Constraint # added constraint: constraint((T0318)A128.CB, (T0318)I148.CB) [> 4.0864 = 6.8106 < 8.8539] w=0.1245 to align
# Constraint # added constraint: constraint((T0318)H299.CB, (T0318)V328.CB) [> 4.6628 = 7.7713 < 10.1026] w=0.1234 to align
# Constraint # added constraint: constraint((T0318)L414.CB, (T0318)S424.CB) [> 4.2927 = 7.1546 < 9.3009] w=0.1227 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)S434.CB) [> 2.8618 = 4.7697 < 6.2006] w=0.1227 to align
# Constraint # added constraint: constraint((T0318)A128.CB, (T0318)V146.CB) [> 3.7446 = 6.2409 < 8.1132] w=0.1226 to align
# Constraint # added constraint: constraint((T0318)E306.CB, (T0318)P432.CB) [> 4.4012 = 7.3353 < 9.5359] w=0.1218 to align
# Constraint # added constraint: constraint((T0318)T297.CB, (T0318)T356.CB) [> 4.2564 = 7.0941 < 9.2223] w=0.1212 to align
# Constraint # added constraint: constraint((T0318)A125.CB, (T0318)V170.CB) [> 3.8446 = 6.4077 < 8.3300] w=0.1209 to align
# Constraint # added constraint: constraint((T0318)L20.CB, (T0318)L71.CB) [> 4.1127 = 6.8545 < 8.9108] w=0.1209 to align
# Constraint # added constraint: constraint((T0318)K273.CB, (T0318)T364.CB) [> 2.9300 = 4.8833 < 6.3483] w=0.1186 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)G393.CA) [> 4.7839 = 7.9731 < 10.3650] w=0.1186 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)A335.CB) [> 4.1356 = 6.8927 < 8.9604] w=0.1172 to align
# Constraint # added constraint: constraint((T0318)A300.CB, (T0318)V328.CB) [> 2.9043 = 4.8405 < 6.2927] w=0.1169 to align
# Constraint # added constraint: constraint((T0318)L302.CB, (T0318)V328.CB) [> 4.2416 = 7.0693 < 9.1901] w=0.1169 to align
# Constraint # added constraint: constraint((T0318)P311.CB, (T0318)V328.CB) [> 4.0558 = 6.7597 < 8.7876] w=0.1169 to align
# Constraint # added constraint: constraint((T0318)H65.CB, (T0318)P99.CB) [> 4.4550 = 7.4249 < 9.6524] w=0.1167 to align
# Constraint # added constraint: constraint((T0318)L261.CB, (T0318)C303.CB) [> 3.3219 = 5.5366 < 7.1975] w=0.1166 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)V328.CB) [> 4.0142 = 6.6904 < 8.6975] w=0.1162 to align
# Constraint # added constraint: constraint((T0318)G259.CA, (T0318)M269.CB) [> 3.0159 = 5.0264 < 6.5344] w=0.1156 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)M276.CB) [> 4.5395 = 7.5658 < 9.8356] w=0.1156 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)M269.CB) [> 2.5161 = 4.1935 < 5.4516] w=0.1156 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)G337.CA) [> 3.1438 = 5.2397 < 6.8116] w=0.1156 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)V255.CB) [> 3.8834 = 6.4723 < 8.4140] w=0.1156 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)V254.CB) [> 4.4439 = 7.4066 < 9.6285] w=0.1156 to align
# Constraint # added constraint: constraint((T0318)N381.CB, (T0318)L440.CB) [> 3.9469 = 6.5781 < 8.5516] w=0.1156 to align
# Constraint # added constraint: constraint((T0318)T380.CB, (T0318)G431.CA) [> 4.2791 = 7.1318 < 9.2713] w=0.1156 to align
# Constraint # added constraint: constraint((T0318)E306.CB, (T0318)S434.CB) [> 3.9451 = 6.5752 < 8.5478] w=0.1156 to align
# Constraint # added constraint: constraint((T0318)G372.CA, (T0318)E463.CB) [> 3.3448 = 5.5746 < 7.2470] w=0.1155 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)A300.CB) [> 4.2178 = 7.0297 < 9.1386] w=0.1154 to align
# Constraint # added constraint: constraint((T0318)A300.CB, (T0318)S310.CB) [> 4.0837 = 6.8061 < 8.8479] w=0.1148 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)A462.CB) [> 4.0483 = 6.7472 < 8.7714] w=0.1147 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)A462.CB) [> 3.1945 = 5.3241 < 6.9214] w=0.1147 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)A462.CB) [> 4.2663 = 7.1104 < 9.2436] w=0.1147 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)M421.CB) [> 3.9515 = 6.5858 < 8.5616] w=0.1145 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)K422.CB) [> 2.9992 = 4.9987 < 6.4983] w=0.1145 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)M421.CB) [> 3.3916 = 5.6527 < 7.3485] w=0.1145 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)K422.CB) [> 4.3649 = 7.2748 < 9.4573] w=0.1145 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)I458.CB) [> 4.1554 = 6.9256 < 9.0033] w=0.1130 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)Q262.CB) [> 3.8704 = 6.4506 < 8.3858] w=0.1122 to align
# Constraint # added constraint: constraint((T0318)T229.CB, (T0318)I304.CB) [> 4.0114 = 6.6857 < 8.6914] w=0.1117 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)S417.CB) [> 3.2257 = 5.3762 < 6.9891] w=0.1116 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)S417.CB) [> 3.7996 = 6.3326 < 8.2324] w=0.1116 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)V309.CB) [> 2.9485 = 4.9142 < 6.3884] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)A279.CB, (T0318)V309.CB) [> 2.8851 = 4.8086 < 6.2512] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)A279.CB, (T0318)N307.CB) [> 2.7875 = 4.6459 < 6.0397] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)M276.CB, (T0318)N307.CB) [> 4.4994 = 7.4990 < 9.7487] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)V309.CB) [> 3.6671 = 6.1119 < 7.9455] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)L363.CB) [> 4.3341 = 7.2234 < 9.3904] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)Y347.CB) [> 4.3950 = 7.3250 < 9.5225] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)A378.CB) [> 4.5158 = 7.5263 < 9.7842] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)M379.CB) [> 4.3093 = 7.1822 < 9.3369] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)A378.CB) [> 3.6330 = 6.0549 < 7.8714] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)D343.CB) [> 4.6085 = 7.6808 < 9.9850] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)A300.CB, (T0318)V309.CB) [> 3.5584 = 5.9306 < 7.7098] w=0.1104 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)D420.CB) [> 4.6431 = 7.7386 < 10.0601] w=0.1100 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)N332.CB) [> 3.5022 = 5.8370 < 7.5881] w=0.1097 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)V328.CB) [> 3.4992 = 5.8320 < 7.5816] w=0.1097 to align
# Constraint # added constraint: constraint((T0318)S237.CB, (T0318)T327.CB) [> 3.7003 = 6.1672 < 8.0173] w=0.1097 to align
# Constraint # added constraint: constraint((T0318)H246.CB, (T0318)T327.CB) [> 3.9273 = 6.5456 < 8.5092] w=0.1097 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)T327.CB) [> 3.2948 = 5.4914 < 7.1388] w=0.1097 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)V328.CB) [> 3.8463 = 6.4106 < 8.3337] w=0.1097 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)V328.CB) [> 3.7084 = 6.1807 < 8.0349] w=0.1097 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)E329.CB) [> 3.8718 = 6.4530 < 8.3889] w=0.1097 to align
# Constraint # added constraint: constraint((T0318)G197.CA, (T0318)V234.CB) [> 4.3548 = 7.2579 < 9.4353] w=0.1088 to align
# Constraint # added constraint: constraint((T0318)W52.CB, (T0318)G63.CA) [> 3.9762 = 6.6269 < 8.6150] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)W52.CB, (T0318)R64.CB) [> 4.3072 = 7.1786 < 9.3322] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)L67.CB, (T0318)P87.CB) [> 3.5858 = 5.9763 < 7.7693] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)L67.CB, (T0318)A90.CB) [> 3.2238 = 5.3729 < 6.9848] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)Y69.CB, (T0318)R83.CB) [> 3.6763 = 6.1272 < 7.9653] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)A80.CB, (T0318)E116.CB) [> 3.9247 = 6.5411 < 8.5034] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)G84.CA, (T0318)V120.CB) [> 4.0155 = 6.6925 < 8.7002] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)T47.CB, (T0318)Y69.CB) [> 3.6078 = 6.0130 < 7.8169] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)K37.CB, (T0318)N53.CB) [> 3.6860 = 6.1434 < 7.9865] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)F34.CB, (T0318)I56.CB) [> 3.8609 = 6.4348 < 8.3652] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)T33.CB, (T0318)S57.CB) [> 3.0463 = 5.0772 < 6.6004] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)L29.CB, (T0318)R58.CB) [> 4.0399 = 6.7332 < 8.7531] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)L29.CB, (T0318)S57.CB) [> 4.2989 = 7.1649 < 9.3144] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)V109.CB, (T0318)V124.CB) [> 4.4515 = 7.4192 < 9.6449] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)R83.CB, (T0318)H123.CB) [> 3.0517 = 5.0861 < 6.6119] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)R83.CB, (T0318)D119.CB) [> 2.7987 = 4.6645 < 6.0639] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)F131.CB, (T0318)D178.CB) [> 2.6928 = 4.4880 < 5.8344] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)F45.CB, (T0318)P66.CB) [> 3.9338 = 6.5564 < 8.5233] w=0.1084 to align
# Constraint # added constraint: constraint((T0318)F111.CB, (T0318)I148.CB) [> 3.7954 = 6.3256 < 8.2233] w=0.1063 to align
# Constraint # added constraint: constraint((T0318)V109.CB, (T0318)N147.CB) [> 4.3779 = 7.2964 < 9.4853] w=0.1063 to align
# Constraint # added constraint: constraint((T0318)I59.CB, (T0318)L71.CB) [> 3.9715 = 6.6192 < 8.6049] w=0.1063 to align
# Constraint # added constraint: constraint((T0318)R129.CB, (T0318)V170.CB) [> 3.8783 = 6.4639 < 8.4031] w=0.1057 to align
# Constraint # added constraint: constraint((T0318)F134.CB, (T0318)R175.CB) [> 3.8312 = 6.3854 < 8.3010] w=0.1057 to align
# Constraint # added constraint: constraint((T0318)I127.CB, (T0318)I148.CB) [> 2.8768 = 4.7946 < 6.2330] w=0.1042 to align
# Constraint # added constraint: constraint((T0318)L113.CB, (T0318)I148.CB) [> 3.9096 = 6.5160 < 8.4708] w=0.1041 to align
# Constraint # added constraint: constraint((T0318)V23.CB, (T0318)I75.CB) [> 3.3651 = 5.6084 < 7.2909] w=0.1030 to align
# Constraint # added constraint: constraint((T0318)K273.CB, (T0318)I458.CB) [> 4.6041 = 7.6736 < 9.9756] w=0.1027 to align
# Constraint # added constraint: constraint((T0318)S424.CB, (T0318)A437.CB) [> 4.4267 = 7.3778 < 9.5911] w=0.1023 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)V305.CB) [> 4.5919 = 7.6532 < 9.9492] w=0.1013 to align
# Constraint # added constraint: constraint((T0318)G372.CA, (T0318)A459.CB) [> 2.8024 = 4.6706 < 6.0718] w=0.1006 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)D359.CB) [> 4.4387 = 7.3978 < 9.6171] w=0.1000 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)M282.CB) [> 3.4237 = 5.7061 < 7.4179] w=0.1000 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)D257.CB) [> 3.4700 = 5.7833 < 7.5182] w=0.0987 to align
# Constraint # added constraint: constraint((T0318)L374.CB, (T0318)K415.CB) [> 4.3155 = 7.1924 < 9.3502] w=0.0972 to align
# Constraint # added constraint: constraint((T0318)H375.CB, (T0318)N425.CB) [> 2.4872 = 4.1454 < 5.3890] w=0.0972 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)L414.CB) [> 3.2546 = 5.4244 < 7.0517] w=0.0972 to align
# Constraint # added constraint: constraint((T0318)A377.CB, (T0318)L414.CB) [> 3.7877 = 6.3129 < 8.2068] w=0.0972 to align
# Constraint # added constraint: constraint((T0318)A395.CB, (T0318)G412.CA) [> 4.5250 = 7.5417 < 9.8042] w=0.0972 to align
# Constraint # added constraint: constraint((T0318)C152.CB, (T0318)L166.CB) [> 2.8064 = 4.6774 < 6.0806] w=0.0969 to align
# Constraint # added constraint: constraint((T0318)S434.CB, (T0318)A460.CB) [> 3.6833 = 6.1388 < 7.9805] w=0.0966 to align
# Constraint # added constraint: constraint((T0318)N381.CB, (T0318)A460.CB) [> 3.7704 = 6.2841 < 8.1693] w=0.0966 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)A460.CB) [> 4.2384 = 7.0639 < 9.1831] w=0.0966 to align
# Constraint # added constraint: constraint((T0318)M360.CB, (T0318)A460.CB) [> 4.4409 = 7.4015 < 9.6219] w=0.0966 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)A460.CB) [> 2.4904 = 4.1507 < 5.3960] w=0.0966 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)A460.CB) [> 4.5321 = 7.5535 < 9.8195] w=0.0966 to align
# Constraint # added constraint: constraint((T0318)L298.CB, (T0318)T327.CB) [> 4.4030 = 7.3383 < 9.5398] w=0.0965 to align
# Constraint # added constraint: constraint((T0318)K273.CB, (T0318)G365.CA) [> 3.5953 = 5.9922 < 7.7899] w=0.0950 to align
# Constraint # added constraint: constraint((T0318)G365.CA, (T0318)G472.CA) [> 4.0245 = 6.7075 < 8.7197] w=0.0950 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)G468.CA) [> 3.4497 = 5.7496 < 7.4744] w=0.0940 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)T469.CB) [> 4.3137 = 7.1895 < 9.3464] w=0.0940 to align
# Constraint # added constraint: constraint((T0318)N381.CB, (T0318)M421.CB) [> 3.2353 = 5.3923 < 7.0099] w=0.0940 to align
# Constraint # added constraint: constraint((T0318)L363.CB, (T0318)G472.CA) [> 4.0169 = 6.6949 < 8.7034] w=0.0936 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)R274.CB) [> 3.3719 = 5.6199 < 7.3058] w=0.0926 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)V436.CB) [> 4.7122 = 7.8537 < 10.2098] w=0.0926 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)E329.CB) [> 3.9943 = 6.6571 < 8.6542] w=0.0902 to align
# Constraint # added constraint: constraint((T0318)N53.CB, (T0318)L74.CB) [> 2.2121 = 3.6869 < 4.7929] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)V41.CB, (T0318)R64.CB) [> 3.3164 = 5.5273 < 7.1855] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)F38.CB, (T0318)R64.CB) [> 3.0219 = 5.0365 < 6.5475] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)M55.CB, (T0318)L74.CB) [> 3.0927 = 5.1545 < 6.7008] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)M55.CB, (T0318)I75.CB) [> 4.0010 = 6.6683 < 8.6688] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)M55.CB, (T0318)T76.CB) [> 2.3642 = 3.9403 < 5.1224] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)M55.CB, (T0318)T88.CB) [> 4.1386 = 6.8977 < 8.9670] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)M55.CB, (T0318)N89.CB) [> 3.8358 = 6.3930 < 8.3110] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)I56.CB, (T0318)T88.CB) [> 3.2985 = 5.4976 < 7.1468] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)R58.CB, (T0318)E96.CB) [> 3.2286 = 5.3810 < 6.9953] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)A12.CB, (T0318)H68.CB) [> 4.4407 = 7.4011 < 9.6214] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)N101.CB, (T0318)D149.CB) [> 4.2632 = 7.1054 < 9.2371] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)N101.CB, (T0318)V150.CB) [> 3.6454 = 6.0757 < 7.8983] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)L370.CB, (T0318)P432.CB) [> 4.6715 = 7.7858 < 10.1215] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)S19.CB, (T0318)L97.CB) [> 4.1883 = 6.9805 < 9.0746] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)I21.CB, (T0318)I75.CB) [> 2.4636 = 4.1060 < 5.3377] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)I22.CB, (T0318)I75.CB) [> 3.6411 = 6.0684 < 7.8889] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)V23.CB, (T0318)V77.CB) [> 3.9079 = 6.5131 < 8.4671] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)G412.CA, (T0318)K428.CB) [> 3.3853 = 5.6422 < 7.3349] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)A462.CB, (T0318)L475.CB) [> 4.2540 = 7.0899 < 9.2169] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)Y102.CB, (T0318)L144.CB) [> 4.0639 = 6.7732 < 8.8052] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)N108.CB, (T0318)V146.CB) [> 4.6324 = 7.7206 < 10.0368] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)V109.CB, (T0318)V146.CB) [> 3.3328 = 5.5547 < 7.2212] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)L113.CB, (T0318)T156.CB) [> 2.8256 = 4.7092 < 6.1220] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)R373.CB, (T0318)T469.CB) [> 4.4931 = 7.4885 < 9.7350] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)L71.CB, (T0318)L97.CB) [> 3.7935 = 6.3225 < 8.2193] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)H91.CB, (T0318)R129.CB) [> 4.0159 = 6.6932 < 8.7012] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)A128.CB, (T0318)T164.CB) [> 3.5462 = 5.9104 < 7.6835] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)A128.CB, (T0318)L163.CB) [> 4.3297 = 7.2161 < 9.3809] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)A125.CB, (T0318)A474.CB) [> 4.4508 = 7.4180 < 9.6434] w=0.0867 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)V436.CB) [> 4.7356 = 7.8927 < 10.2605] w=0.0856 to align
# Constraint # added constraint: constraint((T0318)L17.CB, (T0318)L67.CB) [> 3.8148 = 6.3580 < 8.2654] w=0.0854 to align
# Constraint # added constraint: constraint((T0318)M55.CB, (T0318)R64.CB) [> 4.4982 = 7.4970 < 9.7461] w=0.0854 to align
# Constraint # added constraint: constraint((T0318)Y102.CB, (T0318)V146.CB) [> 4.1066 = 6.8444 < 8.8977] w=0.0846 to align
# Constraint # added constraint: constraint((T0318)H110.CB, (T0318)I148.CB) [> 4.3715 = 7.2858 < 9.4715] w=0.0846 to align
# Constraint # added constraint: constraint((T0318)S434.CB, (T0318)A459.CB) [> 4.7247 = 7.8745 < 10.2369] w=0.0846 to align
# Constraint # added constraint: constraint((T0318)L163.CB, (T0318)E284.CB) [> 3.9230 = 6.5383 < 8.4997] w=0.0844 to align
# Constraint # added constraint: constraint((T0318)S434.CB, (T0318)I445.CB) [> 3.3498 = 5.5830 < 7.2579] w=0.0844 to align
# Constraint # added constraint: constraint((T0318)A300.CB, (T0318)P311.CB) [> 3.5606 = 5.9344 < 7.7147] w=0.0844 to align
# Constraint # added constraint: constraint((T0318)V464.CB, (T0318)F476.CB) [> 3.0345 = 5.0574 < 6.5747] w=0.0832 to align
# Constraint # added constraint: constraint((T0318)A462.CB, (T0318)F476.CB) [> 3.8057 = 6.3429 < 8.2457] w=0.0832 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)E329.CB) [> 2.9158 = 4.8597 < 6.3176] w=0.0829 to align
# Constraint # added constraint: constraint((T0318)L113.CB, (T0318)D149.CB) [> 3.7964 = 6.3274 < 8.2256] w=0.0825 to align
# Constraint # added constraint: constraint((T0318)G376.CA, (T0318)A459.CB) [> 4.5805 = 7.6342 < 9.9244] w=0.0823 to align
# Constraint # added constraint: constraint((T0318)H299.CB, (T0318)D359.CB) [> 4.1276 = 6.8793 < 8.9431] w=0.0821 to align
# Constraint # added constraint: constraint((T0318)A300.CB, (T0318)D359.CB) [> 4.3131 = 7.1885 < 9.3450] w=0.0821 to align
# Constraint # added constraint: constraint((T0318)K37.CB, (T0318)H65.CB) [> 4.3233 = 7.2055 < 9.3671] w=0.0814 to align
# Constraint # added constraint: constraint((T0318)F134.CB, (T0318)N145.CB) [> 3.8098 = 6.3496 < 8.2545] w=0.0807 to align
# Constraint # added constraint: constraint((T0318)N147.CB, (T0318)K203.CB) [> 3.6779 = 6.1299 < 7.9688] w=0.0806 to align
# Constraint # added constraint: constraint((T0318)P180.CB, (T0318)Y256.CB) [> 3.2955 = 5.4925 < 7.1402] w=0.0800 to align
# Constraint # added constraint: constraint((T0318)E463.CB, (T0318)G472.CA) [> 4.3477 = 7.2461 < 9.4199] w=0.0795 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)I418.CB) [> 4.1487 = 6.9145 < 8.9889] w=0.0792 to align
# Constraint # added constraint: constraint((T0318)M276.CB, (T0318)H292.CB) [> 3.7052 = 6.1754 < 8.0280] w=0.0791 to align
# Constraint # added constraint: constraint((T0318)F410.CB, (T0318)L479.CB) [> 4.6848 = 7.8080 < 10.1504] w=0.0791 to align
# Constraint # added constraint: constraint((T0318)A392.CB, (T0318)F410.CB) [> 3.3367 = 5.5612 < 7.2296] w=0.0791 to align
# Constraint # added constraint: constraint((T0318)K315.CB, (T0318)V328.CB) [> 4.2455 = 7.0759 < 9.1986] w=0.0789 to align
# Constraint # added constraint: constraint((T0318)L298.CB, (T0318)G325.CA) [> 3.7496 = 6.2493 < 8.1241] w=0.0787 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)H375.CB) [> 3.6831 = 6.1385 < 7.9801] w=0.0783 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)L374.CB) [> 2.3289 = 3.8814 < 5.0459] w=0.0783 to align
# Constraint # added constraint: constraint((T0318)A128.CB, (T0318)V170.CB) [> 3.7724 = 6.2874 < 8.1736] w=0.0780 to align
# Constraint # added constraint: constraint((T0318)K266.CB, (T0318)G465.CA) [> 4.5637 = 7.6062 < 9.8881] w=0.0777 to align
# Constraint # added constraint: constraint((T0318)Q262.CB, (T0318)S310.CB) [> 4.0779 = 6.7964 < 8.8354] w=0.0770 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)C303.CB) [> 3.9428 = 6.5713 < 8.5427] w=0.0770 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)C301.CB) [> 3.9715 = 6.6191 < 8.6048] w=0.0770 to align
# Constraint # added constraint: constraint((T0318)P311.CB, (T0318)P432.CB) [> 4.2141 = 7.0236 < 9.1306] w=0.0759 to align
# Constraint # added constraint: constraint((T0318)P311.CB, (T0318)G431.CA) [> 4.4546 = 7.4243 < 9.6516] w=0.0759 to align
# Constraint # added constraint: constraint((T0318)P311.CB, (T0318)D430.CB) [> 4.1878 = 6.9797 < 9.0736] w=0.0759 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)T484.CB) [> 2.5914 = 4.3190 < 5.6147] w=0.0759 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)E463.CB) [> 3.9374 = 6.5623 < 8.5310] w=0.0759 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)A460.CB) [> 3.3687 = 5.6144 < 7.2988] w=0.0758 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)A459.CB) [> 3.4542 = 5.7570 < 7.4841] w=0.0758 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)A377.CB) [> 4.7073 = 7.8455 < 10.1991] w=0.0748 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)C303.CB) [> 3.6244 = 6.0406 < 7.8528] w=0.0747 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)A361.CB) [> 3.8574 = 6.4290 < 8.3577] w=0.0736 to align
# Constraint # added constraint: constraint((T0318)R64.CB, (T0318)P99.CB) [> 3.3490 = 5.5816 < 7.2561] w=0.0733 to align
# Constraint # added constraint: constraint((T0318)T364.CB, (T0318)G468.CA) [> 4.6144 = 7.6907 < 9.9979] w=0.0728 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)L339.CB) [> 3.3254 = 5.5424 < 7.2051] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)D343.CB) [> 3.8154 = 6.3589 < 8.2666] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)G224.CA, (T0318)F233.CB) [> 4.3105 = 7.1842 < 9.3395] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)V235.CB) [> 4.2822 = 7.1371 < 9.2782] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)V234.CB) [> 4.3681 = 7.2801 < 9.4642] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)F233.CB) [> 2.6013 = 4.3354 < 5.6361] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)I204.CB, (T0318)H238.CB) [> 3.3771 = 5.6284 < 7.3170] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)G365.CA, (T0318)E383.CB) [> 4.7518 = 7.9196 < 10.2955] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)G365.CA, (T0318)D382.CB) [> 2.2614 = 3.7689 < 4.8996] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)G365.CA, (T0318)A377.CB) [> 4.6305 = 7.7175 < 10.0327] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)L341.CB, (T0318)A366.CB) [> 3.0150 = 5.0250 < 6.5325] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)I340.CB, (T0318)L363.CB) [> 4.4836 = 7.4727 < 9.7146] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)L339.CB, (T0318)L363.CB) [> 4.4483 = 7.4139 < 9.6381] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)L339.CB) [> 4.0308 = 6.7181 < 8.7335] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)T265.CB, (T0318)D275.CB) [> 3.8009 = 6.3348 < 8.2352] w=0.0724 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)T258.CB) [> 4.0992 = 6.8320 < 8.8816] w=0.0707 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)E329.CB) [> 2.7612 = 4.6020 < 5.9826] w=0.0706 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)V328.CB) [> 4.3694 = 7.2824 < 9.4671] w=0.0706 to align
# Constraint # added constraint: constraint((T0318)N381.CB, (T0318)S434.CB) [> 4.5822 = 7.6370 < 9.9281] w=0.0705 to align
# Constraint # added constraint: constraint((T0318)V206.CB, (T0318)G218.CA) [> 3.7943 = 6.3239 < 8.2210] w=0.0676 to align
# Constraint # added constraint: constraint((T0318)F134.CB, (T0318)V146.CB) [> 3.5036 = 5.8394 < 7.5912] w=0.0673 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)N307.CB) [> 4.1340 = 6.8899 < 8.9569] w=0.0670 to align
# Constraint # added constraint: constraint((T0318)T205.CB, (T0318)I220.CB) [> 3.4836 = 5.8061 < 7.5479] w=0.0654 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)E329.CB) [> 3.7900 = 6.3166 < 8.2116] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)I21.CB, (T0318)A90.CB) [> 4.6415 = 7.7358 < 10.0566] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)T364.CB, (T0318)G431.CA) [> 3.2957 = 5.4928 < 7.1406] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)S19.CB, (T0318)L113.CB) [> 4.2110 = 7.0183 < 9.1238] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)S19.CB, (T0318)F114.CB) [> 2.7373 = 4.5621 < 5.9307] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)S51.CB, (T0318)L67.CB) [> 3.2372 = 5.3954 < 7.0140] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)S51.CB, (T0318)H68.CB) [> 4.4905 = 7.4842 < 9.7295] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)S54.CB, (T0318)H65.CB) [> 4.6619 = 7.7698 < 10.1007] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)S54.CB, (T0318)P66.CB) [> 4.0354 = 6.7256 < 8.7433] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)K37.CB, (T0318)I56.CB) [> 4.3493 = 7.2489 < 9.4235] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)F38.CB, (T0318)S54.CB) [> 4.5410 = 7.5683 < 9.8388] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)V41.CB, (T0318)S51.CB) [> 3.5566 = 5.9277 < 7.7060] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)V41.CB, (T0318)N53.CB) [> 4.5033 = 7.5055 < 9.7572] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)F45.CB, (T0318)R64.CB) [> 4.3313 = 7.2188 < 9.3845] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)L212.CB, (T0318)D343.CB) [> 4.6028 = 7.6714 < 9.9728] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)I220.CB, (T0318)L323.CB) [> 4.6406 = 7.7343 < 10.0546] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)G224.CA, (T0318)A313.CB) [> 4.7297 = 7.8829 < 10.2477] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)M276.CB, (T0318)V305.CB) [> 4.7911 = 7.9851 < 10.3807] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)E463.CB) [> 4.7609 = 7.9348 < 10.3153] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)Q11.CB, (T0318)L67.CB) [> 4.4658 = 7.4429 < 9.6758] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)V13.CB, (T0318)H68.CB) [> 3.4222 = 5.7036 < 7.4147] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)G14.CA, (T0318)H68.CB) [> 3.5247 = 5.8745 < 7.6368] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)K98.CB, (T0318)N147.CB) [> 3.1274 = 5.2123 < 6.7761] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)P103.CB, (T0318)V150.CB) [> 4.6433 = 7.7389 < 10.0606] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)D105.CB, (T0318)V151.CB) [> 3.5243 = 5.8738 < 7.6359] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)C132.CB, (T0318)R171.CB) [> 3.3039 = 5.5065 < 7.1585] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)I320.CB, (T0318)A419.CB) [> 4.7775 = 7.9626 < 10.3513] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)L374.CB, (T0318)P461.CB) [> 4.4340 = 7.3899 < 9.6069] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)I10.CB, (T0318)P66.CB) [> 4.1416 = 6.9027 < 8.9734] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)I10.CB, (T0318)L67.CB) [> 3.9421 = 6.5702 < 8.5412] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)P228.CB, (T0318)S310.CB) [> 4.7294 = 7.8824 < 10.2471] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)D359.CB) [> 4.7257 = 7.8761 < 10.2390] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)L456.CB) [> 4.7422 = 7.9036 < 10.2747] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)H123.CB, (T0318)V151.CB) [> 4.7572 = 7.9287 < 10.3073] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)V124.CB, (T0318)F162.CB) [> 4.4542 = 7.4237 < 9.6508] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)I458.CB) [> 4.6639 = 7.7732 < 10.1051] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)M322.CB, (T0318)L339.CB) [> 4.7920 = 7.9866 < 10.3827] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)P87.CB, (T0318)R129.CB) [> 4.2192 = 7.0319 < 9.1415] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)P87.CB, (T0318)T130.CB) [> 4.4795 = 7.4658 < 9.7056] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)Y117.CB, (T0318)V151.CB) [> 3.7406 = 6.2343 < 8.1046] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)T106.CB, (T0318)L144.CB) [> 3.9167 = 6.5279 < 8.4862] w=0.0651 to align
# Constraint # added constraint: constraint((T0318)M360.CB, (T0318)G472.CA) [> 4.3616 = 7.2694 < 9.4502] w=0.0641 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)P231.CB) [> 3.4588 = 5.7647 < 7.4942] w=0.0640 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)I304.CB) [> 3.7423 = 6.2372 < 8.1083] w=0.0640 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)V305.CB) [> 2.6707 = 4.4512 < 5.7865] w=0.0640 to align
# Constraint # added constraint: constraint((T0318)D318.CB, (T0318)G431.CA) [> 4.4050 = 7.3416 < 9.5441] w=0.0640 to align
# Constraint # added constraint: constraint((T0318)V13.CB, (T0318)L67.CB) [> 3.8046 = 6.3409 < 8.2432] w=0.0637 to align
# Constraint # added constraint: constraint((T0318)V13.CB, (T0318)F45.CB) [> 2.8985 = 4.8309 < 6.2801] w=0.0637 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)M421.CB) [> 4.7175 = 7.8625 < 10.2213] w=0.0637 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)S417.CB) [> 4.0035 = 6.6726 < 8.6743] w=0.0637 to align
# Constraint # added constraint: constraint((T0318)V345.CB, (T0318)M421.CB) [> 4.4294 = 7.3823 < 9.5970] w=0.0637 to align
# Constraint # added constraint: constraint((T0318)F346.CB, (T0318)D420.CB) [> 2.8150 = 4.6917 < 6.0992] w=0.0637 to align
# Constraint # added constraint: constraint((T0318)I75.CB, (T0318)T106.CB) [> 3.4593 = 5.7655 < 7.4952] w=0.0630 to align
# Constraint # added constraint: constraint((T0318)P103.CB, (T0318)V120.CB) [> 4.1168 = 6.8613 < 8.9197] w=0.0624 to align
# Constraint # added constraint: constraint((T0318)H299.CB, (T0318)E329.CB) [> 4.0586 = 6.7643 < 8.7937] w=0.0623 to align
# Constraint # added constraint: constraint((T0318)S135.CB, (T0318)L144.CB) [> 4.2917 = 7.1528 < 9.2986] w=0.0616 to align
# Constraint # added constraint: constraint((T0318)H222.CB, (T0318)A232.CB) [> 3.6941 = 6.1568 < 8.0038] w=0.0613 to align
# Constraint # added constraint: constraint((T0318)I127.CB, (T0318)C301.CB) [> 3.2566 = 5.4277 < 7.0560] w=0.0611 to align
# Constraint # added constraint: constraint((T0318)S135.CB, (T0318)S202.CB) [> 3.2717 = 5.4529 < 7.0888] w=0.0611 to align
# Constraint # added constraint: constraint((T0318)N147.CB, (T0318)S202.CB) [> 3.2787 = 5.4646 < 7.1039] w=0.0611 to align
# Constraint # added constraint: constraint((T0318)V305.CB, (T0318)N332.CB) [> 3.9527 = 6.5878 < 8.5641] w=0.0611 to align
# Constraint # added constraint: constraint((T0318)A313.CB, (T0318)M322.CB) [> 3.5742 = 5.9570 < 7.7440] w=0.0611 to align
# Constraint # added constraint: constraint((T0318)I319.CB, (T0318)N332.CB) [> 4.6187 = 7.6978 < 10.0072] w=0.0611 to align
# Constraint # added constraint: constraint((T0318)I320.CB, (T0318)N331.CB) [> 4.0505 = 6.7509 < 8.7762] w=0.0611 to align
# Constraint # added constraint: constraint((T0318)L302.CB, (T0318)P311.CB) [> 2.6806 = 4.4677 < 5.8080] w=0.0611 to align
# Constraint # added constraint: constraint((T0318)V150.CB, (T0318)I204.CB) [> 3.2805 = 5.4675 < 7.1077] w=0.0603 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)A460.CB) [> 3.9150 = 6.5249 < 8.4824] w=0.0601 to align
# Constraint # added constraint: constraint((T0318)Y69.CB, (T0318)P103.CB) [> 4.3979 = 7.3298 < 9.5287] w=0.0597 to align
# Constraint # added constraint: constraint((T0318)M360.CB, (T0318)M379.CB) [> 3.2512 = 5.4187 < 7.0444] w=0.0590 to align
# Constraint # added constraint: constraint((T0318)M276.CB, (T0318)D343.CB) [> 3.8831 = 6.4718 < 8.4133] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)H292.CB) [> 2.6619 = 4.4365 < 5.7674] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)H292.CB) [> 3.4294 = 5.7156 < 7.4303] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)A279.CB, (T0318)L298.CB) [> 4.6502 = 7.7503 < 10.0754] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)A279.CB, (T0318)D343.CB) [> 3.0223 = 5.0372 < 6.5484] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)A300.CB, (T0318)I340.CB) [> 3.0636 = 5.1060 < 6.6378] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)A300.CB, (T0318)D343.CB) [> 4.2288 = 7.0479 < 9.1623] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)I340.CB) [> 4.4565 = 7.4275 < 9.6557] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)C132.CB, (T0318)T351.CB) [> 3.0488 = 5.0813 < 6.6057] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)A248.CB) [> 2.6014 = 4.3358 < 5.6365] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)I247.CB) [> 3.0979 = 5.1632 < 6.7121] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)V254.CB) [> 4.3096 = 7.1826 < 9.3374] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)I247.CB) [> 3.6542 = 6.0903 < 7.9174] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)L374.CB) [> 4.2863 = 7.1439 < 9.2871] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)L302.CB, (T0318)I340.CB) [> 2.9286 = 4.8811 < 6.3454] w=0.0588 to align
# Constraint # added constraint: constraint((T0318)L302.CB, (T0318)A361.CB) [> 4.5264 = 7.5440 < 9.8072] w=0.0588 to align
# Probability sum: -877.2731, CN propb: -877.2731 weights: 0.2215 constraints: 1718
# command:Found ConstraintSet
# PrintContacts align.constraints_v3
Number of constraints in align.constraints 1718
# command:Found ConstraintSet
# PrintContacts align_bonus.constraints_v3
Number of constraints in align.constraints.bonus 1718
# command:Found ConstraintSet
# PrintContacts rejected.constraints_v3
Number of constraints in rejected.constraints 6735
# command:Found ConstraintSet
# PrintContacts rejected_bonus.constraints_v3
Number of constraints in rejected.constraints.bonus 6735
# command:Found ConstraintSet
# PrintContacts non_contacts.constraints_v3
Number of constraints in noncontact.constraints 0
# command:Found ConstraintSet
# PrintContacts non_contacts_bonus.constraints_v3
Number of constraints in noncontact.constraints.bonus 0
# command:Found ConstraintSet
# PrintContacts all.constraints_v3
Number of constraints in all.constraints 8453
# command:069] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)S434.CB) [> 2.5344 = 4.2240 < 5.4912] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)L456.CB) [> 3.7054 = 6.1757 < 8.0285] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)G431.CA) [> 4.4591 = 7.4319 < 9.6615] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)S434.CB) [> 2.6544 = 4.4240 < 5.7512] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)A300.CB) [> 2.3104 = 3.8506 < 5.0058] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)S434.CB) [> 4.2320 = 7.0533 < 9.1692] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)M282.CB) [> 4.6458 = 7.7430 < 10.0659] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)A279.CB, (T0318)A300.CB) [> 4.6699 = 7.7831 < 10.1180] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)E239.CB, (T0318)G325.CA) [> 3.5427 = 5.9045 < 7.6758] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)E284.CB) [> 3.2209 = 5.3681 < 6.9785] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)N332.CB) [> 3.8396 = 6.3993 < 8.3191] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)A335.CB) [> 3.4920 = 5.8200 < 7.5660] w=0.0586 to align
# Constraint # added constraint: constraint((T0318)S371.CB, (T0318)A474.CB) [> 4.0179 = 6.6965 < 8.7055] w=0.0578 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)P231.CB) [> 2.4045 = 4.0075 < 5.2097] w=0.0574 to align
# Constraint # added constraint: constraint((T0318)M429.CB, (T0318)P461.CB) [> 3.4966 = 5.8277 < 7.5760] w=0.0572 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)A459.CB) [> 3.3441 = 5.5735 < 7.2456] w=0.0571 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)A459.CB) [> 4.1369 = 6.8949 < 8.9633] w=0.0571 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)A459.CB) [> 4.0144 = 6.6906 < 8.6978] w=0.0571 to align
# Constraint # added constraint: constraint((T0318)K133.CB, (T0318)N145.CB) [> 3.8766 = 6.4610 < 8.3994] w=0.0570 to align
# Constraint # added constraint: constraint((T0318)D382.CB, (T0318)D430.CB) [> 4.4956 = 7.4927 < 9.7405] w=0.0566 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)C303.CB) [> 4.0314 = 6.7190 < 8.7347] w=0.0566 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)I304.CB) [> 4.2349 = 7.0581 < 9.1756] w=0.0566 to align
# Constraint # added constraint: constraint((T0318)A335.CB, (T0318)S434.CB) [> 4.2552 = 7.0920 < 9.2196] w=0.0561 to align
# Constraint # added constraint: constraint((T0318)I93.CB, (T0318)Y117.CB) [> 3.4148 = 5.6914 < 7.3988] w=0.0558 to align
# Constraint # added constraint: constraint((T0318)V290.CB, (T0318)K326.CB) [> 3.8319 = 6.3864 < 8.3024] w=0.0558 to align
# Constraint # added constraint: constraint((T0318)A300.CB, (T0318)E329.CB) [> 4.2085 = 7.0141 < 9.1183] w=0.0558 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)E329.CB) [> 2.9061 = 4.8434 < 6.2965] w=0.0558 to align
# Constraint # added constraint: constraint((T0318)S310.CB, (T0318)V328.CB) [> 4.0531 = 6.7552 < 8.7817] w=0.0558 to align
# Constraint # added constraint: constraint((T0318)S310.CB, (T0318)I330.CB) [> 3.5239 = 5.8732 < 7.6352] w=0.0558 to align
# Constraint # added constraint: constraint((T0318)I312.CB, (T0318)V328.CB) [> 3.2922 = 5.4870 < 7.1330] w=0.0558 to align
# Constraint # added constraint: constraint((T0318)L341.CB, (T0318)Q367.CB) [> 4.0498 = 6.7496 < 8.7745] w=0.0546 to align
# Constraint # added constraint: constraint((T0318)A368.CB, (T0318)D382.CB) [> 3.4046 = 5.6743 < 7.3766] w=0.0546 to align
# Constraint # added constraint: constraint((T0318)I21.CB, (T0318)L71.CB) [> 3.8463 = 6.4106 < 8.3337] w=0.0545 to align
# Constraint # added constraint: constraint((T0318)A280.CB, (T0318)L363.CB) [> 4.7963 = 7.9939 < 10.3920] w=0.0544 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)G325.CA) [> 4.2600 = 7.1000 < 9.2300] w=0.0536 to align
# Constraint # added constraint: constraint((T0318)V151.CB, (T0318)C303.CB) [> 3.5855 = 5.9759 < 7.7686] w=0.0530 to align
# Constraint # added constraint: constraint((T0318)P230.CB, (T0318)T258.CB) [> 4.5630 = 7.6050 < 9.8865] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)I204.CB, (T0318)F233.CB) [> 4.1749 = 6.9581 < 9.0456] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)E329.CB) [> 4.0369 = 6.7282 < 8.7466] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)V290.CB) [> 3.7226 = 6.2043 < 8.0656] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)I319.CB) [> 4.1679 = 6.9466 < 9.0305] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)T258.CB, (T0318)A279.CB) [> 3.1355 = 5.2259 < 6.7937] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)T258.CB, (T0318)N332.CB) [> 3.0761 = 5.1268 < 6.6648] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)T258.CB, (T0318)D334.CB) [> 3.4427 = 5.7378 < 7.4591] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)L289.CB, (T0318)I319.CB) [> 4.0295 = 6.7158 < 8.7305] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)D318.CB) [> 4.7772 = 7.9621 < 10.3507] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)I319.CB) [> 2.2296 = 3.7160 < 4.8309] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)V328.CB) [> 3.6556 = 6.0927 < 7.9205] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)E329.CB) [> 4.4450 = 7.4084 < 9.6309] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)F358.CB) [> 3.1342 = 5.2237 < 6.7908] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)M282.CB) [> 4.5423 = 7.5705 < 9.8416] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)A279.CB) [> 4.5011 = 7.5018 < 9.7523] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)Y256.CB, (T0318)D359.CB) [> 4.3651 = 7.2751 < 9.4576] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)Y256.CB, (T0318)T333.CB) [> 4.0563 = 6.7606 < 8.7887] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)D359.CB) [> 2.3577 = 3.9294 < 5.1082] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)F358.CB) [> 4.1550 = 6.9250 < 9.0024] w=0.0511 to align
# Constraint # added constraint: constraint((T0318)V254.CB, (T0318)A300.CB) [> 4.3145 = 7.1908 < 9.3481] w=0.0489 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)V250.CB) [> 4.0426 = 6.7376 < 8.7589] w=0.0489 to align
# Constraint # added constraint: constraint((T0318)I304.CB, (T0318)D359.CB) [> 4.1776 = 6.9627 < 9.0516] w=0.0489 to align
# Constraint # added constraint: constraint((T0318)I304.CB, (T0318)M360.CB) [> 3.9510 = 6.5850 < 8.5605] w=0.0489 to align
# Constraint # added constraint: constraint((T0318)N307.CB, (T0318)D359.CB) [> 1.5597 = 2.5996 < 3.3795] w=0.0489 to align
# Constraint # added constraint: constraint((T0318)N307.CB, (T0318)M360.CB) [> 3.9332 = 6.5553 < 8.5219] w=0.0489 to align
# Constraint # added constraint: constraint((T0318)K266.CB, (T0318)G281.CA) [> 4.5877 = 7.6461 < 9.9399] w=0.0489 to align
# Constraint # added constraint: constraint((T0318)M360.CB, (T0318)D457.CB) [> 4.0803 = 6.8005 < 8.8406] w=0.0471 to align
# Constraint # added constraint: constraint((T0318)I93.CB, (T0318)T130.CB) [> 4.1644 = 6.9406 < 9.0228] w=0.0463 to align
# Constraint # added constraint: constraint((T0318)Q43.CB, (T0318)H68.CB) [> 3.6638 = 6.1063 < 7.9383] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)Q43.CB, (T0318)P66.CB) [> 3.5031 = 5.8386 < 7.5901] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V23.CB, (T0318)Y102.CB) [> 4.5431 = 7.5719 < 9.8434] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)L29.CB, (T0318)I59.CB) [> 3.5264 = 5.8773 < 7.6405] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)L97.CB, (T0318)N147.CB) [> 4.6488 = 7.7480 < 10.0724] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)L67.CB, (T0318)P103.CB) [> 4.1762 = 6.9603 < 9.0484] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)R83.CB, (T0318)P103.CB) [> 3.8935 = 6.4892 < 8.4360] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)R7.CB, (T0318)K98.CB) [> 3.0556 = 5.0927 < 6.6205] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)N8.CB, (T0318)S62.CB) [> 4.1050 = 6.8417 < 8.8942] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)N8.CB, (T0318)G63.CA) [> 2.7088 = 4.5146 < 5.8690] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)N8.CB, (T0318)R64.CB) [> 4.1359 = 6.8931 < 8.9611] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)N8.CB, (T0318)H65.CB) [> 3.2368 = 5.3947 < 7.0131] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)N8.CB, (T0318)H91.CB) [> 3.9654 = 6.6089 < 8.5916] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)N8.CB, (T0318)Y94.CB) [> 3.9195 = 6.5325 < 8.4922] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)N8.CB, (T0318)P99.CB) [> 2.9999 = 4.9998 < 6.4997] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)N8.CB, (T0318)I100.CB) [> 4.7869 = 7.9781 < 10.3715] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)G9.CA, (T0318)G63.CA) [> 3.8632 = 6.4387 < 8.3703] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)G9.CA, (T0318)R64.CB) [> 3.4880 = 5.8133 < 7.5573] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)G9.CA, (T0318)H65.CB) [> 3.7130 = 6.1884 < 8.0449] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)G9.CA, (T0318)P99.CB) [> 3.5630 = 5.9383 < 7.7198] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)G9.CA, (T0318)I100.CB) [> 3.1647 = 5.2745 < 6.8569] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V4.CB, (T0318)P60.CB) [> 3.5075 = 5.8459 < 7.5997] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V4.CB, (T0318)A61.CB) [> 3.0003 = 5.0006 < 6.5007] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V4.CB, (T0318)I100.CB) [> 3.1085 = 5.1808 < 6.7350] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)L5.CB, (T0318)A61.CB) [> 4.0172 = 6.6953 < 8.7039] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V6.CB, (T0318)P60.CB) [> 4.7319 = 7.8865 < 10.2525] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V6.CB, (T0318)A61.CB) [> 2.5954 = 4.3257 < 5.6235] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V6.CB, (T0318)S62.CB) [> 4.4697 = 7.4495 < 9.6844] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V6.CB, (T0318)G63.CA) [> 4.5553 = 7.5922 < 9.8698] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V6.CB, (T0318)E96.CB) [> 4.6460 = 7.7433 < 10.0663] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V6.CB, (T0318)K98.CB) [> 3.8365 = 6.3942 < 8.3124] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V6.CB, (T0318)P99.CB) [> 3.6318 = 6.0530 < 7.8689] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V6.CB, (T0318)I100.CB) [> 2.8640 = 4.7733 < 6.2053] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V6.CB, (T0318)D149.CB) [> 4.6295 = 7.7159 < 10.0307] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)R7.CB, (T0318)A61.CB) [> 4.3142 = 7.1904 < 9.3475] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)R7.CB, (T0318)S62.CB) [> 3.4397 = 5.7328 < 7.4527] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)R7.CB, (T0318)Y94.CB) [> 4.7769 = 7.9616 < 10.3501] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)A12.CB, (T0318)L67.CB) [> 3.7300 = 6.2167 < 8.0817] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V13.CB, (T0318)Q43.CB) [> 3.5680 = 5.9467 < 7.7306] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V13.CB, (T0318)P66.CB) [> 3.1547 = 5.2579 < 6.8352] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)G14.CA, (T0318)Y69.CB) [> 2.9498 = 4.9164 < 6.3913] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)G9.CA, (T0318)N101.CB) [> 4.2465 = 7.0775 < 9.2008] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)G9.CA, (T0318)Y102.CB) [> 4.2513 = 7.0855 < 9.2112] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)I10.CB, (T0318)R64.CB) [> 4.4982 = 7.4970 < 9.7461] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)I10.CB, (T0318)H65.CB) [> 2.5799 = 4.2999 < 5.5899] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)I10.CB, (T0318)P87.CB) [> 3.5404 = 5.9007 < 7.6708] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)I10.CB, (T0318)P99.CB) [> 3.8050 = 6.3417 < 8.2443] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)I10.CB, (T0318)I100.CB) [> 4.5760 = 7.6266 < 9.9146] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)I10.CB, (T0318)N101.CB) [> 3.0631 = 5.1051 < 6.6367] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)I10.CB, (T0318)Y102.CB) [> 3.7979 = 6.3299 < 8.2289] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)Q11.CB, (T0318)I22.CB) [> 3.5047 = 5.8411 < 7.5935] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)Q11.CB, (T0318)V23.CB) [> 2.3929 = 3.9882 < 5.1846] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)Q11.CB, (T0318)K26.CB) [> 3.8811 = 6.4684 < 8.4090] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)Q11.CB, (T0318)R64.CB) [> 4.1004 = 6.8340 < 8.8842] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)Q11.CB, (T0318)P66.CB) [> 3.4687 = 5.7811 < 7.5155] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V109.CB, (T0318)D149.CB) [> 3.0884 = 5.1473 < 6.6915] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)C132.CB, (T0318)V464.CB) [> 4.4989 = 7.4982 < 9.7477] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)G412.CA, (T0318)G427.CA) [> 4.4981 = 7.4968 < 9.7458] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V109.CB, (T0318)V150.CB) [> 4.4152 = 7.3586 < 9.5662] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)R129.CB, (T0318)Y471.CB) [> 4.4422 = 7.4037 < 9.6248] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)I10.CB, (T0318)L20.CB) [> 4.0265 = 6.7108 < 8.7241] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)A366.CB, (T0318)K428.CB) [> 4.4989 = 7.4982 < 9.7477] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V32.CB, (T0318)W52.CB) [> 3.2287 = 5.3812 < 6.9956] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)Y117.CB, (T0318)V150.CB) [> 3.1955 = 5.3258 < 6.9235] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)Y471.CB) [> 4.7745 = 7.9576 < 10.3448] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)Y69.CB, (T0318)S81.CB) [> 3.3155 = 5.5258 < 7.1835] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)V32.CB, (T0318)N53.CB) [> 4.5437 = 7.5729 < 9.8448] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)M55.CB, (T0318)V77.CB) [> 4.7682 = 7.9470 < 10.3312] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)W52.CB, (T0318)L67.CB) [> 4.6628 = 7.7713 < 10.1027] w=0.0434 to align
# Constraint # added constraint: constraint((T0318)A406.CB, (T0318)A459.CB) [> 4.4139 = 7.3566 < 9.5636] w=0.0432 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)S416.CB) [> 2.6166 = 4.3611 < 5.6694] w=0.0432 to align
# Constraint # added constraint: constraint((T0318)Y221.CB, (T0318)V328.CB) [> 3.2243 = 5.3738 < 6.9859] w=0.0423 to align
# Constraint # added constraint: constraint((T0318)V46.CB, (T0318)P66.CB) [> 3.8826 = 6.4709 < 8.4122] w=0.0420 to align
# Constraint # added constraint: constraint((T0318)C152.CB, (T0318)V250.CB) [> 4.3918 = 7.3197 < 9.5156] w=0.0407 to align
# Constraint # added constraint: constraint((T0318)T130.CB, (T0318)I319.CB) [> 4.0963 = 6.8271 < 8.8752] w=0.0407 to align
# Constraint # added constraint: constraint((T0318)K273.CB, (T0318)P311.CB) [> 2.9543 = 4.9239 < 6.4011] w=0.0407 to align
# Constraint # added constraint: constraint((T0318)K273.CB, (T0318)A300.CB) [> 4.1954 = 6.9923 < 9.0900] w=0.0407 to align
# Constraint # added constraint: constraint((T0318)T297.CB, (T0318)G325.CA) [> 3.8538 = 6.4230 < 8.3499] w=0.0407 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)I304.CB) [> 3.5583 = 5.9305 < 7.7097] w=0.0407 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)K273.CB) [> 3.9567 = 6.5946 < 8.5730] w=0.0407 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)P311.CB) [> 4.7864 = 7.9773 < 10.3705] w=0.0407 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)K273.CB) [> 3.9209 = 6.5349 < 8.4953] w=0.0407 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)L249.CB) [> 4.2979 = 7.1632 < 9.3121] w=0.0407 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)D457.CB) [> 4.7516 = 7.9194 < 10.2952] w=0.0406 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)D430.CB) [> 4.3660 = 7.2766 < 9.4597] w=0.0403 to align
# Constraint # added constraint: constraint((T0318)H222.CB, (T0318)E329.CB) [> 3.0373 = 5.0622 < 6.5808] w=0.0402 to align
# Constraint # added constraint: constraint((T0318)H222.CB, (T0318)V328.CB) [> 3.9216 = 6.5360 < 8.4968] w=0.0402 to align
# Constraint # added constraint: constraint((T0318)F134.CB, (T0318)I148.CB) [> 3.5579 = 5.9299 < 7.7088] w=0.0399 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)L249.CB) [> 4.1223 = 6.8705 < 8.9317] w=0.0392 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)L249.CB) [> 4.2967 = 7.1612 < 9.3095] w=0.0392 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)L352.CB) [> 4.5792 = 7.6321 < 9.9217] w=0.0392 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)G278.CA) [> 4.5595 = 7.5992 < 9.8790] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)L456.CB) [> 2.9643 = 4.9405 < 6.4226] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)I458.CB) [> 4.7177 = 7.8628 < 10.2216] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)L456.CB) [> 4.0712 = 6.7853 < 8.8209] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)I458.CB) [> 3.3366 = 5.5611 < 7.2294] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)A181.CB) [> 3.6195 = 6.0325 < 7.8423] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)S434.CB, (T0318)I458.CB) [> 4.4279 = 7.3798 < 9.5937] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)G281.CA) [> 4.6614 = 7.7690 < 10.0998] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)L456.CB) [> 4.1947 = 6.9912 < 9.0886] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)I458.CB) [> 3.8145 = 6.3574 < 8.2647] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)M360.CB, (T0318)S434.CB) [> 3.7251 = 6.2085 < 8.0711] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)M360.CB) [> 3.7633 = 6.2721 < 8.1537] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)K252.CB) [> 4.6907 = 7.8178 < 10.1632] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)K252.CB) [> 4.7107 = 7.8512 < 10.2066] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)V254.CB) [> 3.1412 = 5.2354 < 6.8060] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)G253.CA) [> 2.5568 = 4.2613 < 5.5397] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)K252.CB) [> 3.1024 = 5.1706 < 6.7218] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)E329.CB) [> 4.7535 = 7.9225 < 10.2992] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)A279.CB) [> 3.0989 = 5.1648 < 6.7142] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)G278.CA) [> 2.8354 = 4.7257 < 6.1434] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)G277.CA) [> 4.7984 = 7.9974 < 10.3966] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)M360.CB) [> 4.1069 = 6.8447 < 8.8982] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)M282.CB) [> 3.1752 = 5.2920 < 6.8796] w=0.0391 to align
# Constraint # added constraint: constraint((T0318)D382.CB, (T0318)M429.CB) [> 4.1703 = 6.9505 < 9.0357] w=0.0384 to align
# Constraint # added constraint: constraint((T0318)I56.CB, (T0318)H65.CB) [> 4.6938 = 7.8230 < 10.1699] w=0.0382 to align
# Constraint # added constraint: constraint((T0318)I21.CB, (T0318)Y69.CB) [> 4.0141 = 6.6902 < 8.6973] w=0.0382 to align
# Constraint # added constraint: constraint((T0318)G224.CA, (T0318)E329.CB) [> 4.6842 = 7.8070 < 10.1491] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)V223.CB, (T0318)N331.CB) [> 3.7290 = 6.2150 < 8.0795] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)H222.CB, (T0318)N331.CB) [> 4.6913 = 7.8189 < 10.1646] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)Y221.CB, (T0318)I330.CB) [> 4.2720 = 7.1201 < 9.2561] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)L363.CB) [> 3.7808 = 6.3014 < 8.1918] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)Q367.CB) [> 4.4226 = 7.3710 < 9.5823] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)A368.CB) [> 2.1784 = 3.6306 < 4.7198] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)L363.CB) [> 4.3113 = 7.1854 < 9.3411] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)Q367.CB) [> 4.0557 = 6.7595 < 8.7873] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)A377.CB) [> 3.4917 = 5.8195 < 7.5654] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)W369.CB, (T0318)L385.CB) [> 3.8794 = 6.4657 < 8.4054] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)P402.CB, (T0318)S416.CB) [> 4.4293 = 7.3821 < 9.5967] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)L404.CB, (T0318)L414.CB) [> 4.7259 = 7.8766 < 10.2395] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)A368.CB) [> 3.6243 = 6.0405 < 7.8526] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)A366.CB) [> 4.7222 = 7.8703 < 10.2314] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)A368.CB) [> 4.2747 = 7.1246 < 9.2619] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)A279.CB) [> 4.7626 = 7.9376 < 10.3189] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)R274.CB, (T0318)A366.CB) [> 3.5825 = 5.9708 < 7.7620] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)L302.CB, (T0318)E329.CB) [> 4.6953 = 7.8255 < 10.1732] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)C301.CB, (T0318)V328.CB) [> 4.7971 = 7.9952 < 10.3938] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)E284.CB, (T0318)L363.CB) [> 4.7909 = 7.9848 < 10.3803] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)L363.CB) [> 2.8152 = 4.6919 < 6.0995] w=0.0380 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)A342.CB) [> 3.5486 = 5.9144 < 7.6887] w=0.0368 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)C301.CB) [> 4.7984 = 7.9973 < 10.3965] w=0.0362 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)N307.CB) [> 4.7629 = 7.9382 < 10.3197] w=0.0362 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)E306.CB) [> 2.5685 = 4.2809 < 5.5652] w=0.0362 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)N307.CB) [> 3.6575 = 6.0959 < 7.9246] w=0.0362 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)T469.CB) [> 3.8389 = 6.3981 < 8.3175] w=0.0362 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)I304.CB) [> 4.3499 = 7.2498 < 9.4247] w=0.0362 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)V305.CB) [> 4.2943 = 7.1571 < 9.3042] w=0.0362 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)A361.CB) [> 2.8695 = 4.7824 < 6.2172] w=0.0356 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)A361.CB) [> 2.9427 = 4.9046 < 6.3759] w=0.0356 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)A361.CB) [> 3.9928 = 6.6547 < 8.6512] w=0.0356 to align
# Constraint # added constraint: constraint((T0318)W369.CB, (T0318)N381.CB) [> 4.4409 = 7.4015 < 9.6219] w=0.0356 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)A377.CB) [> 3.3210 = 5.5349 < 7.1954] w=0.0356 to align
# Constraint # added constraint: constraint((T0318)Y69.CB, (T0318)A80.CB) [> 4.0483 = 6.7472 < 8.7714] w=0.0326 to align
# Constraint # added constraint: constraint((T0318)Q43.CB, (T0318)N53.CB) [> 3.3806 = 5.6344 < 7.3247] w=0.0326 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)A248.CB) [> 3.4949 = 5.8249 < 7.5724] w=0.0326 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)H299.CB) [> 3.6156 = 6.0260 < 7.8338] w=0.0326 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)G251.CA) [> 4.7327 = 7.8879 < 10.2542] w=0.0326 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)K252.CB) [> 4.7167 = 7.8612 < 10.2196] w=0.0326 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)C303.CB) [> 4.0958 = 6.8263 < 8.8742] w=0.0326 to align
# Constraint # added constraint: constraint((T0318)H375.CB, (T0318)D457.CB) [> 4.2609 = 7.1014 < 9.2319] w=0.0281 to align
# Constraint # added constraint: constraint((T0318)H375.CB, (T0318)I458.CB) [> 3.4162 = 5.6937 < 7.4018] w=0.0281 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)H299.CB) [> 4.5253 = 7.5422 < 9.8049] w=0.0269 to align
# Constraint # added constraint: constraint((T0318)A401.CB, (T0318)A459.CB) [> 3.3590 = 5.5984 < 7.2779] w=0.0261 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)S434.CB) [> 3.9750 = 6.6250 < 8.6125] w=0.0261 to align
# Constraint # added constraint: constraint((T0318)N101.CB, (T0318)Y117.CB) [> 3.4814 = 5.8023 < 7.5430] w=0.0256 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)V328.CB) [> 4.3664 = 7.2773 < 9.4605] w=0.0243 to align
# Constraint # added constraint: constraint((T0318)V255.CB, (T0318)T297.CB) [> 3.4655 = 5.7758 < 7.5085] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)T297.CB) [> 3.1161 = 5.1934 < 6.7515] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)L298.CB) [> 3.8811 = 6.4685 < 8.4091] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)H299.CB) [> 4.3174 = 7.1957 < 9.3544] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)D257.CB, (T0318)F358.CB) [> 4.1303 = 6.8839 < 8.9491] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)G259.CA, (T0318)L298.CB) [> 4.4568 = 7.4281 < 9.6565] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)G259.CA, (T0318)H299.CB) [> 2.4685 = 4.1142 < 5.3484] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)G259.CA, (T0318)F358.CB) [> 4.3939 = 7.3231 < 9.5201] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)Y221.CB, (T0318)A232.CB) [> 4.2957 = 7.1595 < 9.3074] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)V255.CB) [> 4.6058 = 7.6763 < 9.9792] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)V255.CB) [> 2.1484 = 3.5807 < 4.6549] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)D257.CB) [> 3.0965 = 5.1608 < 6.7091] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)T297.CB) [> 4.1312 = 6.8854 < 8.9509] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)V255.CB) [> 4.4079 = 7.3466 < 9.5506] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)D257.CB) [> 4.1183 = 6.8639 < 8.9230] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)D257.CB) [> 2.6043 = 4.3404 < 5.6426] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)G259.CA) [> 3.6606 = 6.1011 < 7.9314] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)M379.CB) [> 4.1361 = 6.8934 < 8.9615] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)T265.CB, (T0318)L298.CB) [> 4.0283 = 6.7138 < 8.7280] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)A300.CB, (T0318)M360.CB) [> 3.9474 = 6.5791 < 8.5528] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)L298.CB, (T0318)F358.CB) [> 3.9075 = 6.5126 < 8.4663] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)T297.CB, (T0318)F358.CB) [> 3.5224 = 5.8706 < 7.6318] w=0.0233 to align
# Constraint # added constraint: constraint((T0318)I458.CB, (T0318)T469.CB) [> 4.3983 = 7.3305 < 9.5297] w=0.0229 to align
# Constraint # added constraint: constraint((T0318)S371.CB, (T0318)T469.CB) [> 3.6204 = 6.0340 < 7.8442] w=0.0229 to align
# Constraint # added constraint: constraint((T0318)V4.CB, (T0318)A160.CB) [> 4.2177 = 7.0295 < 9.1384] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)L5.CB, (T0318)H110.CB) [> 4.7333 = 7.8889 < 10.2555] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)L5.CB, (T0318)V120.CB) [> 3.8469 = 6.4115 < 8.3350] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)N8.CB, (T0318)T106.CB) [> 4.5964 = 7.6607 < 9.9589] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)G9.CA, (T0318)N108.CB) [> 4.7179 = 7.8632 < 10.2222] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)M1.CB, (T0318)V146.CB) [> 4.2537 = 7.0895 < 9.2164] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)M1.CB, (T0318)D149.CB) [> 3.3966 = 5.6610 < 7.3593] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)T2.CB, (T0318)D149.CB) [> 3.8295 = 6.3824 < 8.2972] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)T2.CB, (T0318)V150.CB) [> 2.5973 = 4.3289 < 5.6275] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)T2.CB, (T0318)V151.CB) [> 4.1826 = 6.9711 < 9.0624] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)Q3.CB, (T0318)I127.CB) [> 4.5768 = 7.6279 < 9.9163] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)Q3.CB, (T0318)V150.CB) [> 4.5743 = 7.6238 < 9.9110] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)V4.CB, (T0318)V150.CB) [> 4.2642 = 7.1069 < 9.2390] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)I21.CB, (T0318)V32.CB) [> 4.0690 = 6.7816 < 8.8161] w=0.0217 to align
# Constraint # added constraint: constraint((T0318)L426.CB, (T0318)I445.CB) [> 3.4718 = 5.7864 < 7.5223] w=0.0216 to align
# Constraint # added constraint: constraint((T0318)P407.CB, (T0318)G431.CA) [> 3.7204 = 6.2008 < 8.0610] w=0.0216 to align
# Constraint # added constraint: constraint((T0318)L409.CB, (T0318)S424.CB) [> 3.2848 = 5.4747 < 7.1171] w=0.0216 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)D430.CB) [> 4.4742 = 7.4569 < 9.6940] w=0.0208 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)D430.CB) [> 3.5266 = 5.8777 < 7.6410] w=0.0208 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)D430.CB) [> 2.9154 = 4.8590 < 6.3167] w=0.0208 to align
# Constraint # added constraint: constraint((T0318)A181.CB, (T0318)D343.CB) [> 4.5799 = 7.6332 < 9.9231] w=0.0208 to align
# Constraint # added constraint: constraint((T0318)I56.CB, (T0318)P66.CB) [> 4.2495 = 7.0824 < 9.2072] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)I247.CB) [> 3.9753 = 6.6256 < 8.6132] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)A300.CB) [> 2.8785 = 4.7976 < 6.2368] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)I304.CB) [> 4.0274 = 6.7124 < 8.7261] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)C303.CB) [> 4.0224 = 6.7040 < 8.7153] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)I304.CB) [> 2.3301 = 3.8836 < 5.0487] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)E306.CB) [> 4.3671 = 7.2785 < 9.4621] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)N307.CB) [> 3.2311 = 5.3852 < 7.0008] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)V234.CB) [> 4.3361 = 7.2268 < 9.3948] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)L236.CB) [> 2.7041 = 4.5068 < 5.8589] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)K273.CB) [> 4.0252 = 6.7087 < 8.7213] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)H299.CB) [> 4.3009 = 7.1681 < 9.3185] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)I247.CB, (T0318)L302.CB) [> 4.5998 = 7.6664 < 9.9663] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)F131.CB, (T0318)I247.CB) [> 4.1324 = 6.8873 < 8.9535] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)F131.CB, (T0318)T297.CB) [> 4.1109 = 6.8516 < 8.9070] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)F131.CB, (T0318)I319.CB) [> 4.0626 = 6.7709 < 8.8022] w=0.0204 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)G251.CA) [> 4.5752 = 7.6254 < 9.9130] w=0.0196 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)G251.CA) [> 4.0840 = 6.8067 < 8.8487] w=0.0196 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)D191.CB) [> 4.3017 = 7.1695 < 9.3203] w=0.0196 to align
# Constraint # added constraint: constraint((T0318)N53.CB, (T0318)V77.CB) [> 4.5164 = 7.5274 < 9.7856] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)P66.CB, (T0318)I445.CB) [> 4.3060 = 7.1767 < 9.3297] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)A80.CB, (T0318)L289.CB) [> 3.3007 = 5.5012 < 7.1516] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)A80.CB, (T0318)E284.CB) [> 3.6893 = 6.1488 < 7.9935] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)I445.CB) [> 4.7105 = 7.8508 < 10.2061] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)P311.CB, (T0318)P402.CB) [> 3.7280 = 6.2134 < 8.0774] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G412.CA, (T0318)A437.CB) [> 4.5853 = 7.6422 < 9.9348] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G412.CA, (T0318)P433.CB) [> 4.7128 = 7.8547 < 10.2111] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)K252.CB, (T0318)A378.CB) [> 3.9330 = 6.5550 < 8.5215] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)A459.CB) [> 3.3809 = 5.6347 < 7.3252] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)D457.CB) [> 3.8781 = 6.4635 < 8.4026] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G251.CA, (T0318)A378.CB) [> 4.2082 = 7.0136 < 9.1177] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)A459.CB) [> 4.6585 = 7.7642 < 10.0934] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)D457.CB) [> 2.8649 = 4.7748 < 6.2072] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)V250.CB, (T0318)G281.CA) [> 3.7149 = 6.1914 < 8.0489] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)D457.CB) [> 4.0085 = 6.6808 < 8.6850] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)A248.CB, (T0318)D457.CB) [> 4.4864 = 7.4774 < 9.7205] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)I304.CB) [> 4.2917 = 7.1528 < 9.2986] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)M379.CB) [> 4.7792 = 7.9653 < 10.3549] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)A378.CB) [> 2.5981 = 4.3301 < 5.6292] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G253.CA, (T0318)A377.CB) [> 4.3754 = 7.2923 < 9.4800] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)A280.CB) [> 4.3484 = 7.2473 < 9.4215] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)V305.CB, (T0318)D359.CB) [> 3.6620 = 6.1033 < 7.9343] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)V305.CB, (T0318)F358.CB) [> 4.5217 = 7.5362 < 9.7971] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)M379.CB) [> 4.7196 = 7.8660 < 10.2258] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)C303.CB, (T0318)A378.CB) [> 3.2842 = 5.4737 < 7.1158] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)L302.CB, (T0318)A378.CB) [> 3.7115 = 6.1858 < 8.0415] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)L302.CB, (T0318)D343.CB) [> 4.5288 = 7.5480 < 9.8124] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)E284.CB, (T0318)D343.CB) [> 4.2299 = 7.0498 < 9.1647] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)L298.CB) [> 4.6964 = 7.8273 < 10.1755] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)A459.CB) [> 4.5683 = 7.6138 < 9.8979] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)G281.CA, (T0318)D457.CB) [> 4.6978 = 7.8296 < 10.1785] w=0.0195 to align
# Constraint # added constraint: constraint((T0318)F358.CB, (T0318)D457.CB) [> 4.4144 = 7.3573 < 9.5645] w=0.0190 to align
# Constraint # added constraint: constraint((T0318)S434.CB, (T0318)L456.CB) [> 3.5618 = 5.9364 < 7.7173] w=0.0190 to align
# Constraint # added constraint: constraint((T0318)M379.CB, (T0318)I458.CB) [> 4.0858 = 6.8097 < 8.8525] w=0.0190 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)V255.CB) [> 4.6266 = 7.7110 < 10.0243] w=0.0183 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)V254.CB) [> 3.5774 = 5.9624 < 7.7511] w=0.0183 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)P231.CB) [> 4.4988 = 7.4981 < 9.7475] w=0.0183 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)P230.CB) [> 4.3712 = 7.2853 < 9.4708] w=0.0183 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)V255.CB) [> 3.5988 = 5.9980 < 7.7974] w=0.0183 to align
# Constraint # added constraint: constraint((T0318)N307.CB, (T0318)A361.CB) [> 4.7075 = 7.8458 < 10.1996] w=0.0181 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)C303.CB) [> 4.3537 = 7.2562 < 9.4331] w=0.0181 to align
# Constraint # added constraint: constraint((T0318)L249.CB, (T0318)L302.CB) [> 3.9288 = 6.5480 < 8.5124] w=0.0181 to align
# Constraint # added constraint: constraint((T0318)I21.CB, (T0318)V305.CB) [> 3.8764 = 6.4607 < 8.3990] w=0.0178 to align
# Constraint # added constraint: constraint((T0318)I59.CB, (T0318)N101.CB) [> 3.7313 = 6.2188 < 8.0845] w=0.0178 to align
# Constraint # added constraint: constraint((T0318)K25.CB, (T0318)I56.CB) [> 3.7412 = 6.2353 < 8.1058] w=0.0178 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)V328.CB) [> 2.9348 = 4.8913 < 6.3587] w=0.0178 to align
# Constraint # added constraint: constraint((T0318)Q43.CB, (T0318)S54.CB) [> 4.7523 = 7.9205 < 10.2966] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)I22.CB, (T0318)S54.CB) [> 4.3875 = 7.3126 < 9.5063] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)I21.CB, (T0318)I56.CB) [> 3.3833 = 5.6388 < 7.3305] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)S19.CB, (T0318)S54.CB) [> 2.9147 = 4.8578 < 6.3151] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)C301.CB) [> 4.7217 = 7.8694 < 10.2303] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)V170.CB, (T0318)A248.CB) [> 4.4938 = 7.4896 < 9.7365] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)M360.CB) [> 4.4067 = 7.3445 < 9.5479] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)F358.CB) [> 3.9366 = 6.5610 < 8.5293] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)C303.CB) [> 4.1999 = 6.9998 < 9.0997] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)L302.CB) [> 4.7046 = 7.8410 < 10.1933] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)C301.CB) [> 2.5580 = 4.2632 < 5.5422] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)S169.CB, (T0318)V250.CB) [> 3.8095 = 6.3492 < 8.2539] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)C303.CB) [> 4.0911 = 6.8185 < 8.8640] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)K252.CB) [> 4.7293 = 7.8822 < 10.2469] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)G251.CA) [> 4.7424 = 7.9039 < 10.2751] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)L166.CB, (T0318)V250.CB) [> 3.8333 = 6.3888 < 8.3054] w=0.0163 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)G253.CA) [> 3.6510 = 6.0850 < 7.9105] w=0.0156 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)G253.CA) [> 3.9537 = 6.5896 < 8.5665] w=0.0156 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)G253.CA) [> 2.7352 = 4.5587 < 5.9264] w=0.0156 to align
# Constraint # added constraint: constraint((T0318)L213.CB, (T0318)H222.CB) [> 3.7949 = 6.3249 < 8.2224] w=0.0156 to align
# Constraint # added constraint: constraint((T0318)A361.CB, (T0318)A378.CB) [> 3.9034 = 6.5056 < 8.4573] w=0.0143 to align
# Constraint # added constraint: constraint((T0318)D359.CB, (T0318)A378.CB) [> 4.7637 = 7.9395 < 10.3214] w=0.0078 to align
# Constraint # added constraint: constraint((T0318)M360.CB, (T0318)A378.CB) [> 4.4134 = 7.3558 < 9.5625] w=0.0078 to align
# Constraint # added constraint: constraint((T0318)V150.CB, (T0318)Y221.CB) [> 4.3186 = 7.1976 < 9.3569] w=0.0078 to align
# Constraint # added constraint: constraint((T0318)N145.CB, (T0318)Y221.CB) [> 4.1069 = 6.8447 < 8.8982] w=0.0078 to align
# Constraint # added constraint: constraint((T0318)N147.CB, (T0318)Y221.CB) [> 4.3108 = 7.1847 < 9.3401] w=0.0078 to align
# Constraint # added constraint: constraint((T0318)I148.CB, (T0318)Y221.CB) [> 4.1523 = 6.9205 < 8.9966] w=0.0078 to align
# Constraint # added constraint: constraint((T0318)D149.CB, (T0318)Y221.CB) [> 3.1829 = 5.3049 < 6.8963] w=0.0078 to align
# Constraint # added constraint: constraint((T0318)P228.CB, (T0318)T297.CB) [> 2.1347 = 3.5579 < 4.6252] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)P231.CB, (T0318)T297.CB) [> 4.4372 = 7.3953 < 9.6139] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)H299.CB) [> 2.7491 = 4.5818 < 5.9564] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)F358.CB) [> 4.5158 = 7.5264 < 9.7843] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)L298.CB) [> 3.1644 = 5.2740 < 6.8562] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)F233.CB, (T0318)T297.CB) [> 4.2832 = 7.1387 < 9.2803] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)L298.CB, (T0318)V328.CB) [> 3.9546 = 6.5910 < 8.5683] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)M282.CB, (T0318)V328.CB) [> 2.8249 = 4.7082 < 6.1207] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)G278.CA, (T0318)D457.CB) [> 4.0019 = 6.6699 < 8.6709] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)G277.CA, (T0318)D457.CB) [> 4.7511 = 7.9184 < 10.2940] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)H375.CB, (T0318)L456.CB) [> 3.4792 = 5.7986 < 7.5382] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)L363.CB, (T0318)A460.CB) [> 4.2750 = 7.1249 < 9.2624] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)L363.CB, (T0318)A378.CB) [> 4.7113 = 7.8522 < 10.2078] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)M360.CB) [> 4.0418 = 6.7363 < 8.7572] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)D359.CB) [> 3.1527 = 5.2545 < 6.8309] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)L236.CB, (T0318)F358.CB) [> 4.3231 = 7.2052 < 9.3668] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)M360.CB) [> 4.0569 = 6.7615 < 8.7899] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)F358.CB) [> 3.2682 = 5.4471 < 7.0812] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)L298.CB) [> 4.0916 = 6.8194 < 8.8652] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)V235.CB, (T0318)M282.CB) [> 3.8893 = 6.4822 < 8.4269] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)V234.CB, (T0318)F358.CB) [> 4.5657 = 7.6095 < 9.8923] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)H238.CB, (T0318)A361.CB) [> 4.5260 = 7.5433 < 9.8063] w=0.0065 to align
# Constraint # added constraint: constraint((T0318)Y221.CB, (T0318)E329.CB) [> 3.1078 = 5.1797 < 6.7336] w=0.0043 to align
# Constraint # added constraint: constraint((T0318)A378.CB, (T0318)L404.CB) [> 4.3653 = 7.2755 < 9.4581] w=0.0043 to align
# Constraint # added constraint: constraint((T0318)K225.CB, (T0318)L289.CB) [> 3.6125 = 6.0209 < 7.8272] w=0.0022 to align
# Constraint # added constraint: constraint((T0318)K225.CB, (T0318)H299.CB) [> 4.2143 = 7.0238 < 9.1310] w=0.0022 to align
# Constraint # added constraint: constraint((T0318)K225.CB, (T0318)V328.CB) [> 3.5548 = 5.9247 < 7.7021] w=0.0022 to align
# Constraint # added constraint: constraint((T0318)L404.CB, (T0318)G427.CA) [> 3.8268 = 6.3780 < 8.2914] w=0.0022 to align
Unrecognized cost function all for SetCost
Unrecognized cost function 1 for SetCost
# SetCost created cost = 
#	)
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/constraints_v3/T0318/
# command:# reading script from file servers-clean.under
# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0318/decoys/
# ReadConformPDB reading from PDB file chimera.pdb.gz looking for model 1
# choosing archetypes in rotamer library
# Found a chain break before 478
# copying to AlignedFragments data structure
# ReadConformPDB reading from PDB file chimera2.pdb.gz looking for model 1
# Found a chain break before 478
# copying to AlignedFragments data structure
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS5
# ReadConformPDB reading from PDB file servers/3Dpro_TS1.pdb.gz looking for model 1
# Found a chain break before 487
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS1
# ReadConformPDB reading from PDB file servers/3Dpro_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS2
# ReadConformPDB reading from PDB file servers/3Dpro_TS3.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS3
# ReadConformPDB reading from PDB file servers/3Dpro_TS4.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS4
# ReadConformPDB reading from PDB file servers/3Dpro_TS5.pdb.gz looking for model 1
# Found a chain break before 472
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS5
# ReadConformPDB reading from PDB file servers/ABIpro_TS1.pdb.gz looking for model 1
# Found a chain break before 485
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS1
# ReadConformPDB reading from PDB file servers/ABIpro_TS2.pdb.gz looking for model 1
# Found a chain break before 478
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS2
# ReadConformPDB reading from PDB file servers/ABIpro_TS3.pdb.gz looking for model 1
# Found a chain break before 413
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS3
# ReadConformPDB reading from PDB file servers/ABIpro_TS4.pdb.gz looking for model 1
# Found a chain break before 434
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS4
# ReadConformPDB reading from PDB file servers/ABIpro_TS5.pdb.gz looking for model 1
# Found a chain break before 477
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS5
# ReadConformPDB reading from PDB file servers/BayesHH_TS1.pdb.gz looking for model 1
# Found a chain break before 486
# copying to AlignedFragments data structure
# naming current conformation BayesHH_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS1.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS2
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS3.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS3
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS4.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS4
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS5.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS5
# ReadConformPDB reading from PDB file servers/CIRCLE_TS1.pdb.gz looking for model 1
# Found a chain break before 486
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS1
# ReadConformPDB reading from PDB file servers/CIRCLE_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS2
# ReadConformPDB reading from PDB file servers/CIRCLE_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS3
# ReadConformPDB reading from PDB file servers/CIRCLE_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS4
# ReadConformPDB reading from PDB file servers/CIRCLE_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS5
# ReadConformPDB reading from PDB file servers/CPHmodels_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation CPHmodels_TS1
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS1
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS2
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS3
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS4.pdb.gz looking for model 1
WARNING: atoms too close: (T0318)D318.C and (T0318)I319.N only 0 apart, marking (T0318)I319.N as missing
WARNING: atoms too close: (T0318)I319.N and (T0318)I319.CA only 0 apart, marking (T0318)I319.CA as missing
WARNING: atoms too close: (T0318)D318.C and (T0318)I319.CA only 0 apart, marking (T0318)I319.CA as missing
WARNING: atoms too close: (T0318)I319.CA and (T0318)I319.CB only 0 apart, marking (T0318)I319.CB as missing
WARNING: atoms too close: (T0318)I319.N and (T0318)I319.CB only 0 apart, marking (T0318)I319.CB as missing
WARNING: atoms too close: (T0318)D318.C and (T0318)I319.CB only 0 apart, marking (T0318)I319.CB as missing
WARNING: atoms too close: (T0318)I319.CB and (T0318)I319.CG1 only 0 apart, marking (T0318)I319.CG1 as missing
WARNING: atoms too close: (T0318)I319.CA and (T0318)I319.CG1 only 0 apart, marking (T0318)I319.CG1 as missing
WARNING: atoms too close: (T0318)I319.N and (T0318)I319.CG1 only 0 apart, marking (T0318)I319.CG1 as missing
WARNING: atoms too close: (T0318)D318.C and (T0318)I319.CG1 only 0 apart, marking (T0318)I319.CG1 as missing
WARNING: atoms too close: (T0318)I319.CG1 and (T0318)I319.CG2 only 0 apart, marking (T0318)I319.CG2 as missing
WARNING: atoms too close: (T0318)I319.CB and (T0318)I319.CG2 only 0 apart, marking (T0318)I319.CG2 as missing
WARNING: atoms too close: (T0318)I319.CA and (T0318)I319.CG2 only 0 apart, marking (T0318)I319.CG2 as missing
WARNING: atoms too close: (T0318)I319.N and (T0318)I319.CG2 only 0 apart, marking (T0318)I319.CG2 as missing
WARNING: atoms too close: (T0318)D318.C and (T0318)I319.CG2 only 0 apart, marking (T0318)I319.CG2 as missing
WARNING: atoms too close: (T0318)I319.CG2 and (T0318)I319.CD1 only 0 apart, marking (T0318)I319.CD1 as missing
WARNING: atoms too close: (T0318)I319.CG1 and (T0318)I319.CD1 only 0 apart, marking (T0318)I319.CD1 as missing
WARNING: atoms too close: (T0318)I319.CB and (T0318)I319.CD1 only 0 apart, marking (T0318)I319.CD1 as missing
WARNING: atoms too close: (T0318)I319.CA and (T0318)I319.CD1 only 0 apart, marking (T0318)I319.CD1 as missing
WARNING: atoms too close: (T0318)I319.N and (T0318)I319.CD1 only 0 apart, marking (T0318)I319.CD1 as missing
WARNING: atoms too close: (T0318)D318.C and (T0318)I319.CD1 only 0 apart, marking (T0318)I319.CD1 as missing
WARNING: atoms too close: (T0318)I319.CD1 and (T0318)I319.O only 0 apart, marking (T0318)I319.O as missing
WARNING: atoms too close: (T0318)I319.CG2 and (T0318)I319.O only 0 apart, marking (T0318)I319.O as missing
WARNING: atoms too close: (T0318)I319.CG1 and (T0318)I319.O only 0 apart, marking (T0318)I319.O as missing
WARNING: atoms too close: (T0318)I319.CB and (T0318)I319.O only 0 apart, marking (T0318)I319.O as missing
WARNING: atoms too close: (T0318)I319.CA and (T0318)I319.O only 0 apart, marking (T0318)I319.O as missing
WARNING: atoms too close: (T0318)I319.N and (T0318)I319.O only 0 apart, marking (T0318)I319.O as missing
WARNING: atoms too close: (T0318)D318.C and (T0318)I319.O only 0 apart, marking (T0318)I319.O as missing
WARNING: atoms too close: (T0318)I319.O and (T0318)I319.C only 0 apart, marking (T0318)I319.C as missing
WARNING: atoms too close: (T0318)I319.CD1 and (T0318)I319.C only 0 apart, marking (T0318)I319.C as missing
WARNING: atoms too close: (T0318)I319.CG2 and (T0318)I319.C only 0 apart, marking (T0318)I319.C as missing
WARNING: atoms too close: (T0318)I319.CG1 and (T0318)I319.C only 0 apart, marking (T0318)I319.C as missing
WARNING: atoms too close: (T0318)I319.CB and (T0318)I319.C only 0 apart, marking (T0318)I319.C as missing
WARNING: atoms too close: (T0318)I319.CA and (T0318)I319.C only 0 apart, marking (T0318)I319.C as missing
WARNING: atoms too close: (T0318)I319.N and (T0318)I319.C only 0 apart, marking (T0318)I319.C as missing
WARNING: atoms too close: (T0318)D318.C and (T0318)I319.C only 0 apart, marking (T0318)I319.C as missing
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS4
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS5
# ReadConformPDB reading from PDB file servers/Distill_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Distill_TS1
# ReadConformPDB reading from PDB file servers/Distill_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Distill_TS2
# ReadConformPDB reading from PDB file servers/Distill_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Distill_TS3
# ReadConformPDB reading from PDB file servers/Distill_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Distill_TS4
# ReadConformPDB reading from PDB file servers/Distill_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Distill_TS5
# ReadConformPDB reading from PDB file servers/FAMSD_TS1.pdb.gz looking for model 1
# Found a chain break before 486
# copying to AlignedFragments data structure
# naming current conformation FAMSD_TS1
# ReadConformPDB reading from PDB file servers/FAMSD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS2
# ReadConformPDB reading from PDB file servers/FAMSD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS3
# ReadConformPDB reading from PDB file servers/FAMSD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS4
# ReadConformPDB reading from PDB file servers/FAMSD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS5
# ReadConformPDB reading from PDB file servers/FAMS_TS1.pdb.gz looking for model 1
# Found a chain break before 486
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS1
# ReadConformPDB reading from PDB file servers/FAMS_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS2
# ReadConformPDB reading from PDB file servers/FAMS_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FAMS_TS3
# ReadConformPDB reading from PDB file servers/FAMS_TS4.pdb.gz looking for model 1
# Found a chain break before 487
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS4
# ReadConformPDB reading from PDB file servers/FAMS_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FAMS_TS5
# ReadConformPDB reading from PDB file servers/FOLDpro_TS1.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS1
# ReadConformPDB reading from PDB file servers/FOLDpro_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS2
# ReadConformPDB reading from PDB file servers/FOLDpro_TS3.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS3
# ReadConformPDB reading from PDB file servers/FOLDpro_TS4.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS4
# ReadConformPDB reading from PDB file servers/FOLDpro_TS5.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS5
# ReadConformPDB reading from PDB file servers/FORTE1_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL1
# ReadConformPDB reading from PDB file servers/FORTE1_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL2
# ReadConformPDB reading from PDB file servers/FORTE1_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL3
# ReadConformPDB reading from PDB file servers/FORTE1_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL4
# ReadConformPDB reading from PDB file servers/FORTE1_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL5
# ReadConformPDB reading from PDB file servers/FORTE2_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL1
# ReadConformPDB reading from PDB file servers/FORTE2_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL2
# ReadConformPDB reading from PDB file servers/FORTE2_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL3
# ReadConformPDB reading from PDB file servers/FORTE2_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL4
# ReadConformPDB reading from PDB file servers/FORTE2_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL5
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS1.pdb.gz looking for model 1
# Found a chain break before 477
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS1
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS2.pdb.gz looking for model 1
# Found a chain break before 467
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS2
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS3.pdb.gz looking for model 1
# Found a chain break before 438
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS3
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS4.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS4
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS5.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS5
# ReadConformPDB reading from PDB file servers/FUGMOD_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS1
# ReadConformPDB reading from PDB file servers/FUGMOD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS2
# ReadConformPDB reading from PDB file servers/FUGMOD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS3
# ReadConformPDB reading from PDB file servers/FUGMOD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS4
# ReadConformPDB reading from PDB file servers/FUGMOD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS5
# ReadConformPDB reading from PDB file servers/FUGUE_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL1
# ReadConformPDB reading from PDB file servers/FUGUE_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL2
# ReadConformPDB reading from PDB file servers/FUGUE_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL3
# ReadConformPDB reading from PDB file servers/FUGUE_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL4
# ReadConformPDB reading from PDB file servers/FUGUE_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL5
# ReadConformPDB reading from PDB file servers/FUNCTION_TS1.pdb.gz looking for model 1
# Found a chain break before 487
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS1
# ReadConformPDB reading from PDB file servers/FUNCTION_TS2.pdb.gz looking for model 1
# Found a chain break before 472
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS2
# ReadConformPDB reading from PDB file servers/FUNCTION_TS3.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS3
# ReadConformPDB reading from PDB file servers/FUNCTION_TS4.pdb.gz looking for model 1
# Found a chain break before 483
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS4
# ReadConformPDB reading from PDB file servers/FUNCTION_TS5.pdb.gz looking for model 1
# Found a chain break before 487
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS5
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation GeneSilicoMetaServer_TS1
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation GeneSilicoMetaServer_TS2
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS3.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS3
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation GeneSilicoMetaServer_TS4
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS5.pdb.gz looking for model 1
# Found a chain break before 474
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS5
# ReadConformPDB reading from PDB file servers/HHpred1_TS1.pdb.gz looking for model 1
# Found a chain break before 480
# copying to AlignedFragments data structure
# naming current conformation HHpred1_TS1
# ReadConformPDB reading from PDB file servers/HHpred2_TS1.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation HHpred2_TS1
# ReadConformPDB reading from PDB file servers/HHpred3_TS1.pdb.gz looking for model 1
# Found a chain break before 482
# copying to AlignedFragments data structure
# naming current conformation HHpred3_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS2
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS3
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS4
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS5
# ReadConformPDB reading from PDB file servers/LOOPP_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS1
# ReadConformPDB reading from PDB file servers/LOOPP_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS2
# ReadConformPDB reading from PDB file servers/LOOPP_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS3
# ReadConformPDB reading from PDB file servers/LOOPP_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS4
# ReadConformPDB reading from PDB file servers/LOOPP_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS5
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS1.pdb.gz looking for model 1
# Found a chain break before 488
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS1
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS2
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS3.pdb.gz looking for model 1
# Found a chain break before 325
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS3
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS4.pdb.gz looking for model 1
# Found a chain break before 387
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS4
# ReadConformPDB reading from PDB file servers/MetaTasser_TS1.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS1
# ReadConformPDB reading from PDB file servers/MetaTasser_TS2.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS2
# ReadConformPDB reading from PDB file servers/MetaTasser_TS3.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS3
# ReadConformPDB reading from PDB file servers/MetaTasser_TS4.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS4
# ReadConformPDB reading from PDB file servers/MetaTasser_TS5.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS5
# ReadConformPDB reading from PDB file servers/NN_PUT_lab_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation NN_PUT_lab_TS1
# ReadConformPDB reading from PDB file servers/POMYSL_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation POMYSL_TS2
# ReadConformPDB reading from PDB file servers/POMYSL_TS3.pdb.gz looking for model 1
WARNING: atom 1 has residue number 77  < previous residue 491  in servers/POMYSL_TS3.pdb.gz
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation POMYSL_TS3
# ReadConformPDB reading from PDB file servers/POMYSL_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation POMYSL_TS4
# ReadConformPDB reading from PDB file servers/POMYSL_TS5.pdb.gz looking for model 1
WARNING: atom 1 has residue number 77  < previous residue 491  in servers/POMYSL_TS5.pdb.gz
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation POMYSL_TS5
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS1.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS2.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS3.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS4.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS5.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS5
# ReadConformPDB reading from PDB file servers/PROTINFO_TS1.pdb.gz looking for model 1
# Found a chain break before 472
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO_TS2.pdb.gz looking for model 1
# Found a chain break before 484
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO_TS3.pdb.gz looking for model 1
# Found a chain break before 484
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO_TS4.pdb.gz looking for model 1
# Found a chain break before 472
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO_TS5.pdb.gz looking for model 1
# Found a chain break before 486
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS5
# ReadConformPDB reading from PDB file servers/Pcons6_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS1
# ReadConformPDB reading from PDB file servers/Pcons6_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS2
# ReadConformPDB reading from PDB file servers/Pcons6_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Pcons6_TS3
# ReadConformPDB reading from PDB file servers/Pcons6_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS4
# ReadConformPDB reading from PDB file servers/Pcons6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS5
# ReadConformPDB reading from PDB file servers/Phyre-1_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Phyre-1_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS1.pdb.gz looking for model 1
# Found a chain break before 486
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS2.pdb.gz looking for model 1
# Found a chain break before 489
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS2
# ReadConformPDB reading from PDB file servers/Phyre-2_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS3
# ReadConformPDB reading from PDB file servers/Phyre-2_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS4
# ReadConformPDB reading from PDB file servers/Phyre-2_TS5.pdb.gz looking for model 1
# Found a chain break before 485
# copying to AlignedFragments data structure
# naming current conformation Phyre-2_TS5
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS1
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS2
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS3
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS4.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS4
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS1.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS3.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS4.pdb.gz looking for model 1
# Found a chain break before 487
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS5.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS5
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS1.pdb.gz looking for model 1
# Found a chain break before 488
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS1
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS2.pdb.gz looking for model 1
# Found a chain break before 486
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS2
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS3.pdb.gz looking for model 1
# Found a chain break before 486
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS3
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS4.pdb.gz looking for model 1
# Found a chain break before 488
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS4
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS5.pdb.gz looking for model 1
# Found a chain break before 486
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR_TS1.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR_TS3.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR_TS4.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR_TS5.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS5
# ReadConformPDB reading from PDB file servers/ROBETTA_TS1.pdb.gz looking for model 1
# Found a chain break before 469
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS1
# ReadConformPDB reading from PDB file servers/ROBETTA_TS2.pdb.gz looking for model 1
# Found a chain break before 465
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS2
# ReadConformPDB reading from PDB file servers/ROBETTA_TS3.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS3
# ReadConformPDB reading from PDB file servers/ROBETTA_TS4.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS4
# ReadConformPDB reading from PDB file servers/ROBETTA_TS5.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS5
# ReadConformPDB reading from PDB file servers/ROKKY_TS1.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS1
# ReadConformPDB reading from PDB file servers/ROKKY_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS2
# ReadConformPDB reading from PDB file servers/ROKKY_TS3.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS3
# ReadConformPDB reading from PDB file servers/ROKKY_TS4.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS4
# ReadConformPDB reading from PDB file servers/SAM-T02_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL1
# ReadConformPDB reading from PDB file servers/SAM-T02_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL2
# ReadConformPDB reading from PDB file servers/SAM-T02_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL3
# ReadConformPDB reading from PDB file servers/SAM-T02_AL4.pdb.gz looking for model 1
Skipped atom 38, because occupancy 1 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 40, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 42, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 44, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 90, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 92, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 94, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 96, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 778, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 780, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 782, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 784, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1158, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1160, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1162, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1164, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1462, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1464, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1466, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1468, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1538, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1540, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1542, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
Skipped atom 1544, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL4.pdb.gz
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL4
# ReadConformPDB reading from PDB file servers/SAM-T02_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL5
# ReadConformPDB reading from PDB file servers/SAM-T99_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL1
# ReadConformPDB reading from PDB file servers/SAM-T99_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL2
# ReadConformPDB reading from PDB file servers/SAM-T99_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL3
# ReadConformPDB reading from PDB file servers/SAM-T99_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL4
# ReadConformPDB reading from PDB file servers/SAM-T99_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL5
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS1.pdb.gz looking for model 1
# Found a chain break before 478
# copying to AlignedFragments data structure
# naming current conformation SAM_T06_server_TS1
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS2
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS3
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS4
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS5
# ReadConformPDB reading from PDB file servers/SP3_TS1.pdb.gz looking for model 1
# Found a chain break before 487
# copying to AlignedFragments data structure
# naming current conformation SP3_TS1
# ReadConformPDB reading from PDB file servers/SP3_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation SP3_TS2
# ReadConformPDB reading from PDB file servers/SP3_TS3.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation SP3_TS3
# ReadConformPDB reading from PDB file servers/SP3_TS4.pdb.gz looking for model 1
# Found a chain break before 392
# copying to AlignedFragments data structure
# naming current conformation SP3_TS4
# ReadConformPDB reading from PDB file servers/SP3_TS5.pdb.gz looking for model 1
# Found a chain break before 376
# copying to AlignedFragments data structure
# naming current conformation SP3_TS5
# ReadConformPDB reading from PDB file servers/SP4_TS1.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation SP4_TS1
# ReadConformPDB reading from PDB file servers/SP4_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation SP4_TS2
# ReadConformPDB reading from PDB file servers/SP4_TS3.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation SP4_TS3
# ReadConformPDB reading from PDB file servers/SP4_TS4.pdb.gz looking for model 1
# Found a chain break before 399
# copying to AlignedFragments data structure
# naming current conformation SP4_TS4
# ReadConformPDB reading from PDB file servers/SP4_TS5.pdb.gz looking for model 1
# Found a chain break before 436
# copying to AlignedFragments data structure
# naming current conformation SP4_TS5
# ReadConformPDB reading from PDB file servers/SPARKS2_TS1.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS1
# ReadConformPDB reading from PDB file servers/SPARKS2_TS2.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS2
# ReadConformPDB reading from PDB file servers/SPARKS2_TS3.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS3
# ReadConformPDB reading from PDB file servers/SPARKS2_TS4.pdb.gz looking for model 1
# Found a chain break before 459
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS4
# ReadConformPDB reading from PDB file servers/SPARKS2_TS5.pdb.gz looking for model 1
# Found a chain break before 466
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS5
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_expm_TS1.pdb.gz looking for model 1
WARNING: atoms too close: (T0318)T2.CA and (T0318)S19.CA only 0.000 apart, marking (T0318)S19.CA as missing
WARNING: atoms too close: (T0318)Q3.N and (T0318)L20.N only 0.000 apart, marking (T0318)L20.N as missing
WARNING: atoms too close: (T0318)Q3.CA and (T0318)L20.CA only 0.000 apart, marking (T0318)L20.CA as missing
WARNING: atoms too close: (T0318)Q3.CB and (T0318)L20.CB only 0.000 apart, marking (T0318)L20.CB as missing
WARNING: atoms too close: (T0318)Q3.O and (T0318)L20.O only 0.000 apart, marking (T0318)L20.O as missing
WARNING: atoms too close: (T0318)Q3.C and (T0318)L20.C only 0.000 apart, marking (T0318)L20.C as missing
WARNING: atoms too close: (T0318)V4.N and (T0318)I21.N only 0.000 apart, marking (T0318)I21.N as missing
WARNING: atoms too close: (T0318)V4.CA and (T0318)I21.CA only 0.000 apart, marking (T0318)I21.CA as missing
WARNING: atoms too close: (T0318)V4.CB and (T0318)I21.CB only 0.000 apart, marking (T0318)I21.CB as missing
WARNING: atoms too close: (T0318)V4.O and (T0318)I21.O only 0.000 apart, marking (T0318)I21.O as missing
WARNING: atoms too close: (T0318)V4.C and (T0318)I21.C only 0.000 apart, marking (T0318)I21.C as missing
WARNING: atoms too close: (T0318)L5.N and (T0318)I22.N only 0.000 apart, marking (T0318)I22.N as missing
WARNING: atoms too close: (T0318)L5.CA and (T0318)I22.CA only 0.000 apart, marking (T0318)I22.CA as missing
WARNING: atoms too close: (T0318)L5.CB and (T0318)I22.CB only 0.000 apart, marking (T0318)I22.CB as missing
WARNING: atoms too close: (T0318)L5.O and (T0318)I22.O only 0.000 apart, marking (T0318)I22.O as missing
WARNING: atoms too close: (T0318)L5.C and (T0318)I22.C only 0.000 apart, marking (T0318)I22.C as missing
WARNING: atoms too close: (T0318)V6.N and (T0318)V23.N only 0.000 apart, marking (T0318)V23.N as missing
WARNING: atoms too close: (T0318)V6.CA and (T0318)V23.CA only 0.000 apart, marking (T0318)V23.CA as missing
WARNING: atoms too close: (T0318)V6.CB and (T0318)V23.CB only 0.000 apart, marking (T0318)V23.CB as missing
WARNING: atoms too close: (T0318)V6.C and (T0318)V23.C only 0.000 apart, marking (T0318)V23.C as missing
WARNING: atoms too close: (T0318)R7.CA and (T0318)G24.CA only 0.000 apart, marking (T0318)R7.CA as missing
WARNING: atoms too close: (T0318)N8.CA and (T0318)K25.CA only 0.000 apart, marking (T0318)K25.CA as missing
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation UNI-EID_expm_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL1
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS1.pdb.gz looking for model 1
# Found a chain break before 484
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS1
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS2.pdb.gz looking for model 1
# Found a chain break before 484
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS2
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS3.pdb.gz looking for model 1
# Found a chain break before 484
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS3
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS4.pdb.gz looking for model 1
# Found a chain break before 484
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS4
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS5.pdb.gz looking for model 1
# Found a chain break before 471
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS5
# ReadConformPDB reading from PDB file servers/beautshot_TS1.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation beautshot_TS1
# ReadConformPDB reading from PDB file servers/beautshotbase_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation beautshotbase_TS1
# ReadConformPDB reading from PDB file servers/forecast-s_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL1
# ReadConformPDB reading from PDB file servers/forecast-s_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL2
# ReadConformPDB reading from PDB file servers/forecast-s_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL3
# ReadConformPDB reading from PDB file servers/forecast-s_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL4
# ReadConformPDB reading from PDB file servers/forecast-s_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL5
# ReadConformPDB reading from PDB file servers/gtg_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation gtg_AL1
# ReadConformPDB reading from PDB file servers/gtg_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation gtg_AL2
# ReadConformPDB reading from PDB file servers/gtg_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation gtg_AL3
# ReadConformPDB reading from PDB file servers/gtg_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation gtg_AL4
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation karypis.srv.2_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation karypis.srv.2_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation karypis.srv.2_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation karypis.srv.2_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation karypis.srv.2_TS5
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS1.pdb.gz looking for model 1
# Found a chain break before 490
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS2.pdb.gz looking for model 1
# Found a chain break before 489
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS3.pdb.gz looking for model 1
WARNING: atoms too close: (T0318)A392.O and (T0318)G393.N only 0.000 apart, marking (T0318)G393.N as missing
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS4.pdb.gz looking for model 1
WARNING: atoms too close: (T0318)G481.O and (T0318)K482.N only 0.000 apart, marking (T0318)K482.N as missing
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS5.pdb.gz looking for model 1
WARNING: atoms too close: (T0318)S81.O and (T0318)S82.N only 0.000 apart, marking (T0318)S82.N as missing
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS5
# ReadConformPDB reading from PDB file servers/karypis.srv_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS5
# ReadConformPDB reading from PDB file servers/keasar-server_TS1.pdb.gz looking for model 1
# Found a chain break before 470
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS1
# ReadConformPDB reading from PDB file servers/keasar-server_TS2.pdb.gz looking for model 1
# Found a chain break before 374
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS2
# ReadConformPDB reading from PDB file servers/keasar-server_TS3.pdb.gz looking for model 1
# Found a chain break before 379
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS3
# ReadConformPDB reading from PDB file servers/keasar-server_TS4.pdb.gz looking for model 1
# Found a chain break before 432
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS4
# ReadConformPDB reading from PDB file servers/keasar-server_TS5.pdb.gz looking for model 1
# Found a chain break before 458
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS5
# ReadConformPDB reading from PDB file servers/mGen-3D_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation mGen-3D_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS2.pdb.gz looking for model 1
WARNING: atom 1 has residue number 152  < previous residue 485  in servers/nFOLD_TS2.pdb.gz
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS2
# ReadConformPDB reading from PDB file servers/nFOLD_TS3.pdb.gz looking for model 1
WARNING: atom 1 has residue number 164  < previous residue 485  in servers/nFOLD_TS3.pdb.gz
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS3
# ReadConformPDB reading from PDB file servers/nFOLD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS4
# ReadConformPDB reading from PDB file servers/nFOLD_TS5.pdb.gz looking for model 1
WARNING: atom 1 has residue number 1  < previous residue 424  in servers/nFOLD_TS5.pdb.gz
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS5
# ReadConformPDB reading from PDB file servers/panther2_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# naming current conformation panther2_TS1
# ReadConformPDB reading from PDB file servers/shub_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0318 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation shub_TS1
# command:Using radius: 8.0000
Metaserver mode
NUMB_ALIGNS: 253
undertaker: AlignmentsContactsCommands.cc:191: std::vector<Constraint, std::allocator<Constraint> > GetAlignmentsContactsConstraintsPool(const ConformationPool&, std::ostream*, WeightStyle, double): Assertion `weight>=0' failed.