# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/ # command:# reading dunbrack-2191.atoms # #computed average backbone with maximum peptide_sq_deviance = 0.002 # computed average trans backbone unit from 53157 examples # computed average trans backbone unit before proline from 2010 examples # computed average cis backbone unit from 97 examples # trans (non-proline) backbone unit: # CA= -2.2087 1.0126 -0.0030 # O= -0.1499 2.2440 0.0016 # C= -0.6889 1.1368 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4581 -0.0000 0.0000 # cis backbone unit: # CA= -0.1436 2.4534 -0.0002 # O= -2.0284 0.9742 0.0015 # C= -0.8018 1.0771 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4668 0.0000 0.0000 # trans backbone unit before proline: # CA= -2.2100 1.0631 -0.0014 # O= -0.1236 2.2458 0.0075 # C= -0.6872 1.1517 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4660 0.0000 0.0000 # After reading dunbrack-2191.atoms have 2191 chains in training database # Count of chains,residues,atoms: 2191,500310,3902258 # 493341 residues have no bad marker # 3226 residues lack atoms needed to compute omega # 1453 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 4 # HAS_OXT 1167 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 3052 # HAS_UNKNOWN_ATOMS 9 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 979 # NON_PLANAR_PEPTIDE 888 # BAD_PEPTIDE 2680 # Note: may sum to more than number of residues, # because one residue may have multiple problems # command:# Reading rotamer library from dunbrack-2191.rot # command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/ # command:# ReadAtomType exp-pdb.types Read AtomType exp-pdb with 49 types. # command:# ReadClashTable exp-pdb-2191-2symm.clash # Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2 # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0310/ # command:# Making conformation for sequence T0310 numbered 1 through 425 Created new target T0310 from T0310.a2m # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0310/ # command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0310//projects/compbio/experiments/protein-predict/casp7/T0310/align.constraints_v3.costfcn or /projects/compbio/experiments/protein-predict/casp7/T0310//projects/compbio/experiments/protein-predict/casp7/T0310/align.constraints_v3.costfcn.gz for input Trying /projects/compbio/experiments/protein-predict/casp7/T0310/align.constraints_v3.costfcn # reading script from file /projects/compbio/experiments/protein-predict/casp7/T0310/align.constraints_v3.costfcn # future Constraint commands -> align # future HelixConstraint commands -> align # future StrandConstraint commands -> align # future SheetConstraint commands -> align # future Hbond commands -> align # future SSbond commands -> align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)I191.CB) [> 3.7774 = 6.2956 < 8.1843] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)L141.CB) [> 3.1758 = 5.2931 < 6.8810] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)I187.CB) [> 2.8063 = 4.6772 < 6.0804] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)L189.CB) [> 4.2474 = 7.0790 < 9.2028] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)I190.CB) [> 2.7805 = 4.6342 < 6.0245] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)I191.CB) [> 4.2083 = 7.0138 < 9.1179] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)L140.CB) [> 3.5999 = 5.9999 < 7.7998] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)L141.CB) [> 4.1572 = 6.9287 < 9.0073] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)L142.CB) [> 2.9150 = 4.8584 < 6.3159] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)I191.CB) [> 2.8565 = 4.7608 < 6.1891] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)K143.CB) [> 3.0691 = 5.1151 < 6.6497] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)I190.CB) [> 4.1668 = 6.9447 < 9.0281] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)I191.CB) [> 4.1952 = 6.9920 < 9.0896] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)P192.CB) [> 2.6261 = 4.3769 < 5.6899] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)R193.CB) [> 4.2217 = 7.0362 < 9.1471] w=1.0000 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)L142.CB) [> 4.1652 = 6.9420 < 9.0246] w=1.0000 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)K143.CB) [> 4.1640 = 6.9400 < 9.0220] w=1.0000 to align # Constraint # added constraint: constraint((T0310)D188.CB, (T0310)P210.CB) [> 4.1839 = 6.9733 < 9.0652] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L189.CB, (T0310)P210.CB) [> 2.6870 = 4.4784 < 5.8219] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L189.CB, (T0310)V211.CB) [> 4.3404 = 7.2340 < 9.4042] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I190.CB, (T0310)I202.CB) [> 3.7561 = 6.2602 < 8.1383] w=1.0000 to align # Constraint # added constraint: constraint((T0310)P111.CB, (T0310)S136.CB) [> 3.2131 = 5.3552 < 6.9618] w=1.0000 to align # Constraint # added constraint: constraint((T0310)P111.CB, (T0310)G137.CA) [> 2.4587 = 4.0978 < 5.3271] w=1.0000 to align # Constraint # added constraint: constraint((T0310)P111.CB, (T0310)N138.CB) [> 2.8489 = 4.7481 < 6.1726] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I112.CB, (T0310)N138.CB) [> 3.5741 = 5.9568 < 7.7438] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I112.CB, (T0310)D188.CB) [> 2.7289 = 4.5481 < 5.9125] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I112.CB, (T0310)L189.CB) [> 3.0541 = 5.0902 < 6.6173] w=1.0000 to align # Constraint # added constraint: constraint((T0310)G113.CA, (T0310)N138.CB) [> 3.0201 = 5.0334 < 6.5435] w=1.0000 to align # Constraint # added constraint: constraint((T0310)G113.CA, (T0310)D188.CB) [> 2.6825 = 4.4708 < 5.8121] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V114.CB, (T0310)N138.CB) [> 4.1609 = 6.9349 < 9.0154] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V114.CB, (T0310)G139.CA) [> 3.3581 = 5.5968 < 7.2758] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V114.CB, (T0310)M186.CB) [> 3.8378 = 6.3963 < 8.3152] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V114.CB, (T0310)I187.CB) [> 3.1862 = 5.3104 < 6.9035] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V114.CB, (T0310)D188.CB) [> 3.2743 = 5.4571 < 7.0943] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)A133.CB) [> 2.9655 = 4.9424 < 6.4252] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)N138.CB) [> 2.9507 = 4.9179 < 6.3932] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)G139.CA) [> 3.6925 = 6.1541 < 8.0003] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)L140.CB) [> 3.4207 = 5.7012 < 7.4116] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)I187.CB) [> 4.1531 = 6.9218 < 8.9983] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)D188.CB) [> 3.8892 = 6.4820 < 8.4266] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)L189.CB) [> 2.6938 = 4.4897 < 5.8366] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)I190.CB) [> 4.3405 = 7.2342 < 9.4045] w=1.0000 to align # Constraint # added constraint: constraint((T0310)A245.CB, (T0310)D301.CB) [> 4.1592 = 6.9321 < 9.0117] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L254.CB, (T0310)V309.CB) [> 3.2116 = 5.3527 < 6.9584] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L254.CB, (T0310)A315.CB) [> 2.9477 = 4.9128 < 6.3867] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L254.CB, (T0310)H318.CB) [> 3.7980 = 6.3299 < 8.2289] w=1.0000 to align # Constraint # added constraint: constraint((T0310)L254.CB, (T0310)I319.CB) [> 4.0424 = 6.7373 < 8.7585] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I255.CB, (T0310)V308.CB) [> 3.6893 = 6.1488 < 7.9935] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I255.CB, (T0310)V309.CB) [> 4.1848 = 6.9747 < 9.0671] w=1.0000 to align # Constraint # added constraint: constraint((T0310)H256.CB, (T0310)V309.CB) [> 3.5308 = 5.8846 < 7.6500] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V309.CB, (T0310)H318.CB) [> 4.0026 = 6.6710 < 8.6723] w=1.0000 to align # Constraint # added constraint: constraint((T0310)S325.CB, (T0310)S347.CB) [> 2.9654 = 4.9423 < 6.4250] w=1.0000 to align # Constraint # added constraint: constraint((T0310)S325.CB, (T0310)A348.CB) [> 4.0043 = 6.6738 < 8.6760] w=1.0000 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)S347.CB) [> 3.8627 = 6.4378 < 8.3692] w=1.0000 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)A348.CB) [> 3.3464 = 5.5774 < 7.2506] w=1.0000 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)C349.CB) [> 4.0318 = 6.7197 < 8.7357] w=1.0000 to align # Constraint # added constraint: constraint((T0310)D328.CB, (T0310)S347.CB) [> 2.4534 = 4.0890 < 5.3156] w=1.0000 to align # Constraint # added constraint: constraint((T0310)D328.CB, (T0310)C349.CB) [> 4.2681 = 7.1135 < 9.2476] w=1.0000 to align # Constraint # added constraint: constraint((T0310)D328.CB, (T0310)V350.CB) [> 2.9280 = 4.8800 < 6.3440] w=1.0000 to align # Constraint # added constraint: constraint((T0310)D328.CB, (T0310)F351.CB) [> 4.3243 = 7.2071 < 9.3692] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V329.CB, (T0310)V350.CB) [> 4.3302 = 7.2170 < 9.3821] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V329.CB, (T0310)F351.CB) [> 2.6609 = 4.4349 < 5.7653] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I330.CB, (T0310)W352.CB) [> 3.0456 = 5.0760 < 6.5987] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I190.CB, (T0310)V211.CB) [> 3.1146 = 5.1911 < 6.7484] w=1.0000 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)L253.CB) [> 3.0104 = 5.0173 < 6.5224] w=1.0000 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)L254.CB) [> 4.1554 = 6.9257 < 9.0034] w=1.0000 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)V329.CB) [> 2.5600 = 4.2666 < 5.5466] w=1.0000 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)V331.CB) [> 4.2257 = 7.0429 < 9.1557] w=1.0000 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)L254.CB) [> 2.9879 = 4.9799 < 6.4739] w=1.0000 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)A315.CB) [> 3.2059 = 5.3432 < 6.9462] w=1.0000 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)I319.CB) [> 4.0060 = 6.6767 < 8.6797] w=1.0000 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)V329.CB) [> 4.0649 = 6.7749 < 8.8073] w=1.0000 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)I330.CB) [> 2.7941 = 4.6568 < 6.0539] w=1.0000 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)V331.CB) [> 4.0227 = 6.7045 < 8.7158] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)L253.CB) [> 4.0225 = 6.7042 < 8.7155] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)L254.CB) [> 4.1775 = 6.9624 < 9.0512] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)I255.CB) [> 2.7693 = 4.6156 < 6.0002] w=1.0000 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)V331.CB) [> 2.6867 = 4.4779 < 5.8213] w=1.0000 to align # Constraint # added constraint: constraint((T0310)D224.CB, (T0310)V331.CB) [> 3.7973 = 6.3288 < 8.2274] w=1.0000 to align # Constraint # added constraint: constraint((T0310)D224.CB, (T0310)T332.CB) [> 2.3935 = 3.9892 < 5.1859] w=1.0000 to align # Constraint # added constraint: constraint((T0310)S225.CB, (T0310)H256.CB) [> 3.0442 = 5.0737 < 6.5958] w=1.0000 to align # Constraint # added constraint: constraint((T0310)E226.CB, (T0310)T332.CB) [> 3.5218 = 5.8697 < 7.6306] w=1.0000 to align # Constraint # added constraint: constraint((T0310)E226.CB, (T0310)E333.CB) [> 2.7147 = 4.5244 < 5.8818] w=1.0000 to align # Constraint # added constraint: constraint((T0310)A227.CB, (T0310)V331.CB) [> 2.3799 = 3.9664 < 5.1564] w=1.0000 to align # Constraint # added constraint: constraint((T0310)A227.CB, (T0310)T332.CB) [> 3.2838 = 5.4729 < 7.1148] w=1.0000 to align # Constraint # added constraint: constraint((T0310)I187.CB, (T0310)I209.CB) [> 3.8644 = 6.4407 < 8.3729] w=0.9979 to align # Constraint # added constraint: constraint((T0310)D188.CB, (T0310)I209.CB) [> 3.9178 = 6.5297 < 8.4886] w=0.9979 to align # Constraint # added constraint: constraint((T0310)L189.CB, (T0310)I209.CB) [> 3.6937 = 6.1561 < 8.0030] w=0.9979 to align # Constraint # added constraint: constraint((T0310)I190.CB, (T0310)I209.CB) [> 3.6210 = 6.0350 < 7.8455] w=0.9979 to align # Constraint # added constraint: constraint((T0310)V199.CB, (T0310)G213.CA) [> 3.6221 = 6.0368 < 7.8479] w=0.9979 to align # Constraint # added constraint: constraint((T0310)I202.CB, (T0310)V211.CB) [> 4.0037 = 6.6729 < 8.6747] w=0.9979 to align # Constraint # added constraint: constraint((T0310)C219.CB, (T0310)H326.CB) [> 3.5625 = 5.9375 < 7.7188] w=0.9979 to align # Constraint # added constraint: constraint((T0310)L253.CB, (T0310)C305.CB) [> 4.0470 = 6.7451 < 8.7686] w=0.9979 to align # Constraint # added constraint: constraint((T0310)I255.CB, (T0310)L264.CB) [> 3.5004 = 5.8340 < 7.5842] w=0.9793 to align # Constraint # added constraint: constraint((T0310)L142.CB, (T0310)L174.CB) [> 3.3815 = 5.6359 < 7.3266] w=0.9793 to align # Constraint # added constraint: constraint((T0310)L140.CB, (T0310)V172.CB) [> 3.4593 = 5.7655 < 7.4951] w=0.9793 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)T252.CB) [> 4.1968 = 6.9946 < 9.0930] w=0.9772 to align # Constraint # added constraint: constraint((T0310)L253.CB, (T0310)L304.CB) [> 3.8101 = 6.3502 < 8.2553] w=0.9772 to align # Constraint # added constraint: constraint((T0310)R257.CB, (T0310)V308.CB) [> 3.2609 = 5.4348 < 7.0653] w=0.9772 to align # Constraint # added constraint: constraint((T0310)I330.CB, (T0310)N353.CB) [> 4.5439 = 7.5731 < 9.8451] w=0.9772 to align # Constraint # added constraint: constraint((T0310)V331.CB, (T0310)N353.CB) [> 3.5162 = 5.8604 < 7.6185] w=0.9772 to align # Constraint # added constraint: constraint((T0310)T332.CB, (T0310)N353.CB) [> 4.3826 = 7.3044 < 9.4957] w=0.9772 to align # Constraint # added constraint: constraint((T0310)T252.CB, (T0310)C305.CB) [> 3.1049 = 5.1749 < 6.7274] w=0.9752 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)V329.CB) [> 4.4228 = 7.3714 < 9.5828] w=0.9752 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)D328.CB) [> 3.3366 = 5.5610 < 7.2292] w=0.9752 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)T252.CB) [> 2.8984 = 4.8307 < 6.2800] w=0.9752 to align # Constraint # added constraint: constraint((T0310)C219.CB, (T0310)V329.CB) [> 4.3207 = 7.2012 < 9.3615] w=0.9545 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)L254.CB) [> 3.5069 = 5.8447 < 7.5982] w=0.9545 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)I319.CB) [> 2.8443 = 4.7406 < 6.1627] w=0.9545 to align # Constraint # added constraint: constraint((T0310)T252.CB, (T0310)E307.CB) [> 3.8481 = 6.4135 < 8.3375] w=0.9545 to align # Constraint # added constraint: constraint((T0310)L253.CB, (T0310)I306.CB) [> 2.8042 = 4.6736 < 6.0757] w=0.9545 to align # Constraint # added constraint: constraint((T0310)L253.CB, (T0310)E307.CB) [> 4.1210 = 6.8684 < 8.9289] w=0.9545 to align # Constraint # added constraint: constraint((T0310)L254.CB, (T0310)E307.CB) [> 3.1156 = 5.1927 < 6.7505] w=0.9545 to align # Constraint # added constraint: constraint((T0310)I255.CB, (T0310)E307.CB) [> 4.3819 = 7.3032 < 9.4942] w=0.9545 to align # Constraint # added constraint: constraint((T0310)I316.CB, (T0310)H344.CB) [> 3.2394 = 5.3991 < 7.0188] w=0.9545 to align # Constraint # added constraint: constraint((T0310)I319.CB, (T0310)V345.CB) [> 3.6784 = 6.1306 < 7.9698] w=0.9545 to align # Constraint # added constraint: constraint((T0310)H320.CB, (T0310)H344.CB) [> 4.3761 = 7.2935 < 9.4816] w=0.9545 to align # Constraint # added constraint: constraint((T0310)D328.CB, (T0310)V345.CB) [> 2.8501 = 4.7501 < 6.1752] w=0.9545 to align # Constraint # added constraint: constraint((T0310)C219.CB, (T0310)D328.CB) [> 3.6171 = 6.0285 < 7.8370] w=0.9524 to align # Constraint # added constraint: constraint((T0310)D224.CB, (T0310)D334.CB) [> 4.0407 = 6.7345 < 8.7549] w=0.9379 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)A133.CB) [> 4.2478 = 7.0796 < 9.2035] w=0.9379 to align # Constraint # added constraint: constraint((T0310)E120.CB, (T0310)R193.CB) [> 2.9562 = 4.9271 < 6.4052] w=0.9379 to align # Constraint # added constraint: constraint((T0310)E120.CB, (T0310)G194.CA) [> 2.9879 = 4.9798 < 6.4737] w=0.9379 to align # Constraint # added constraint: constraint((T0310)I190.CB, (T0310)P210.CB) [> 4.4669 = 7.4448 < 9.6783] w=0.9379 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)D328.CB) [> 4.4305 = 7.3842 < 9.5995] w=0.9379 to align # Constraint # added constraint: constraint((T0310)D224.CB, (T0310)H256.CB) [> 3.4801 = 5.8002 < 7.5402] w=0.9379 to align # Constraint # added constraint: constraint((T0310)I330.CB, (T0310)V350.CB) [> 4.1216 = 6.8693 < 8.9302] w=0.9379 to align # Constraint # added constraint: constraint((T0310)I330.CB, (T0310)F351.CB) [> 4.4201 = 7.3668 < 9.5768] w=0.9379 to align # Constraint # added constraint: constraint((T0310)I112.CB, (T0310)P210.CB) [> 4.0167 = 6.6946 < 8.7029] w=0.9358 to align # Constraint # added constraint: constraint((T0310)I255.CB, (T0310)I306.CB) [> 3.7900 = 6.3166 < 8.2116] w=0.9337 to align # Constraint # added constraint: constraint((T0310)L142.CB, (T0310)V175.CB) [> 3.8927 = 6.4878 < 8.4342] w=0.9337 to align # Constraint # added constraint: constraint((T0310)T233.CB, (T0310)Q267.CB) [> 2.8495 = 4.7491 < 6.1739] w=0.9337 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)A135.CB) [> 3.7608 = 6.2679 < 8.1483] w=0.9317 to align # Constraint # added constraint: constraint((T0310)L34.CB, (T0310)L158.CB) [> 2.7472 = 4.5787 < 5.9523] w=0.9317 to align # Constraint # added constraint: constraint((T0310)I42.CB, (T0310)S151.CB) [> 3.9101 = 6.5168 < 8.4719] w=0.9317 to align # Constraint # added constraint: constraint((T0310)I42.CB, (T0310)I154.CB) [> 3.5621 = 5.9369 < 7.7179] w=0.9317 to align # Constraint # added constraint: constraint((T0310)G113.CA, (T0310)G139.CA) [> 3.8000 = 6.3334 < 8.2334] w=0.9317 to align # Constraint # added constraint: constraint((T0310)G113.CA, (T0310)L189.CB) [> 4.3472 = 7.2453 < 9.4188] w=0.9317 to align # Constraint # added constraint: constraint((T0310)V114.CB, (T0310)L141.CB) [> 3.9135 = 6.5225 < 8.4792] w=0.9317 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)L141.CB) [> 4.3722 = 7.2870 < 9.4732] w=0.9317 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)K143.CB) [> 4.1869 = 6.9782 < 9.0717] w=0.9317 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)K143.CB) [> 4.1701 = 6.9502 < 9.0352] w=0.9317 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)R193.CB) [> 3.6639 = 6.1065 < 7.9384] w=0.9317 to align # Constraint # added constraint: constraint((T0310)N138.CB, (T0310)L189.CB) [> 4.4983 = 7.4971 < 9.7462] w=0.9317 to align # Constraint # added constraint: constraint((T0310)P192.CB, (T0310)I202.CB) [> 3.1232 = 5.2054 < 6.7670] w=0.9317 to align # Constraint # added constraint: constraint((T0310)P192.CB, (T0310)V211.CB) [> 4.2769 = 7.1282 < 9.2667] w=0.9317 to align # Constraint # added constraint: constraint((T0310)P192.CB, (T0310)G213.CA) [> 3.4199 = 5.6999 < 7.4098] w=0.9317 to align # Constraint # added constraint: constraint((T0310)C219.CB, (T0310)N248.CB) [> 3.5508 = 5.9180 < 7.6934] w=0.9317 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)I134.CB) [> 3.9260 = 6.5434 < 8.5064] w=0.9317 to align # Constraint # added constraint: constraint((T0310)I27.CB, (T0310)V168.CB) [> 3.5151 = 5.8585 < 7.6160] w=0.9317 to align # Constraint # added constraint: constraint((T0310)R24.CB, (T0310)G137.CA) [> 3.7639 = 6.2731 < 8.1550] w=0.9317 to align # Constraint # added constraint: constraint((T0310)R24.CB, (T0310)A135.CB) [> 3.6708 = 6.1181 < 7.9535] w=0.9317 to align # Constraint # added constraint: constraint((T0310)R24.CB, (T0310)I134.CB) [> 4.0077 = 6.6795 < 8.6833] w=0.9317 to align # Constraint # added constraint: constraint((T0310)G13.CA, (T0310)G139.CA) [> 3.4859 = 5.8099 < 7.5529] w=0.9317 to align # Constraint # added constraint: constraint((T0310)G13.CA, (T0310)V114.CB) [> 4.3360 = 7.2267 < 9.3947] w=0.9317 to align # Constraint # added constraint: constraint((T0310)G13.CA, (T0310)G113.CA) [> 3.8770 = 6.4617 < 8.4002] w=0.9317 to align # Constraint # added constraint: constraint((T0310)G12.CA, (T0310)G139.CA) [> 4.2817 = 7.1362 < 9.2771] w=0.9317 to align # Constraint # added constraint: constraint((T0310)R10.CB, (T0310)V114.CB) [> 3.3307 = 5.5513 < 7.2166] w=0.9317 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)L141.CB) [> 3.3207 = 5.5345 < 7.1949] w=0.9317 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)G139.CA) [> 3.1614 = 5.2690 < 6.8497] w=0.9317 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)V114.CB) [> 2.7204 = 4.5339 < 5.8941] w=0.9317 to align # Constraint # added constraint: constraint((T0310)G6.CA, (T0310)L141.CB) [> 3.4998 = 5.8330 < 7.5829] w=0.9317 to align # Constraint # added constraint: constraint((T0310)G6.CA, (T0310)V114.CB) [> 3.7164 = 6.1939 < 8.0521] w=0.9317 to align # Constraint # added constraint: constraint((T0310)Q5.CB, (T0310)L141.CB) [> 3.2147 = 5.3578 < 6.9652] w=0.9317 to align # Constraint # added constraint: constraint((T0310)I330.CB, (T0310)F341.CB) [> 3.1040 = 5.1734 < 6.7254] w=0.9317 to align # Constraint # added constraint: constraint((T0310)V329.CB, (T0310)W352.CB) [> 4.2969 = 7.1614 < 9.3098] w=0.9317 to align # Constraint # added constraint: constraint((T0310)T327.CB, (T0310)F351.CB) [> 4.2380 = 7.0634 < 9.1824] w=0.9317 to align # Constraint # added constraint: constraint((T0310)T327.CB, (T0310)V350.CB) [> 4.4827 = 7.4711 < 9.7124] w=0.9317 to align # Constraint # added constraint: constraint((T0310)T327.CB, (T0310)C349.CB) [> 2.8519 = 4.7531 < 6.1791] w=0.9317 to align # Constraint # added constraint: constraint((T0310)T327.CB, (T0310)A348.CB) [> 4.1288 = 6.8813 < 8.9457] w=0.9317 to align # Constraint # added constraint: constraint((T0310)T327.CB, (T0310)S347.CB) [> 3.4125 = 5.6874 < 7.3936] w=0.9317 to align # Constraint # added constraint: constraint((T0310)I316.CB, (T0310)F341.CB) [> 3.9179 = 6.5299 < 8.4889] w=0.9317 to align # Constraint # added constraint: constraint((T0310)L295.CB, (T0310)C305.CB) [> 3.4996 = 5.8327 < 7.5825] w=0.9317 to align # Constraint # added constraint: constraint((T0310)R257.CB, (T0310)D310.CB) [> 3.5160 = 5.8601 < 7.6181] w=0.9317 to align # Constraint # added constraint: constraint((T0310)E251.CB, (T0310)C305.CB) [> 3.9865 = 6.6442 < 8.6375] w=0.9317 to align # Constraint # added constraint: constraint((T0310)E251.CB, (T0310)Y299.CB) [> 4.1016 = 6.8360 < 8.8868] w=0.9317 to align # Constraint # added constraint: constraint((T0310)E251.CB, (T0310)E298.CB) [> 4.0268 = 6.7114 < 8.7248] w=0.9317 to align # Constraint # added constraint: constraint((T0310)L250.CB, (T0310)V329.CB) [> 3.6919 = 6.1531 < 7.9991] w=0.9317 to align # Constraint # added constraint: constraint((T0310)N248.CB, (T0310)T327.CB) [> 2.7439 = 4.5732 < 5.9452] w=0.9317 to align # Constraint # added constraint: constraint((T0310)N248.CB, (T0310)H326.CB) [> 3.5315 = 5.8859 < 7.6517] w=0.9317 to align # Constraint # added constraint: constraint((T0310)C219.CB, (T0310)A249.CB) [> 3.8661 = 6.4434 < 8.3764] w=0.9317 to align # Constraint # added constraint: constraint((T0310)C219.CB, (T0310)L250.CB) [> 3.1893 = 5.3156 < 6.9102] w=0.9317 to align # Constraint # added constraint: constraint((T0310)C219.CB, (T0310)E251.CB) [> 3.5923 = 5.9872 < 7.7834] w=0.9317 to align # Constraint # added constraint: constraint((T0310)C219.CB, (T0310)T327.CB) [> 2.4039 = 4.0066 < 5.2085] w=0.9317 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)L250.CB) [> 2.5123 = 4.1872 < 5.4434] w=0.9317 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)F341.CB) [> 4.0013 = 6.6688 < 8.6694] w=0.9317 to align # Constraint # added constraint: constraint((T0310)D224.CB, (T0310)I330.CB) [> 4.3945 = 7.3242 < 9.5215] w=0.9317 to align # Constraint # added constraint: constraint((T0310)E226.CB, (T0310)D334.CB) [> 3.3698 = 5.6163 < 7.3012] w=0.9317 to align # Constraint # added constraint: constraint((T0310)A227.CB, (T0310)E333.CB) [> 3.8384 = 6.3973 < 8.3165] w=0.9317 to align # Constraint # added constraint: constraint((T0310)A227.CB, (T0310)N353.CB) [> 4.5534 = 7.5890 < 9.8658] w=0.9317 to align # Constraint # added constraint: constraint((T0310)S239.CB, (T0310)A249.CB) [> 3.6191 = 6.0318 < 7.8413] w=0.9317 to align # Constraint # added constraint: constraint((T0310)P244.CB, (T0310)G300.CA) [> 3.3988 = 5.6647 < 7.3641] w=0.9317 to align # Constraint # added constraint: constraint((T0310)P244.CB, (T0310)L302.CB) [> 2.1054 = 3.5090 < 4.5617] w=0.9317 to align # Constraint # added constraint: constraint((T0310)A245.CB, (T0310)G300.CA) [> 3.3874 = 5.6456 < 7.3393] w=0.9317 to align # Constraint # added constraint: constraint((T0310)V232.CB, (T0310)V331.CB) [> 2.7480 = 4.5800 < 5.9541] w=0.9172 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)V232.CB) [> 3.1861 = 5.3102 < 6.9033] w=0.9172 to align # Constraint # added constraint: constraint((T0310)Y243.CB, (T0310)D301.CB) [> 4.0497 = 6.7495 < 8.7743] w=0.9151 to align # Constraint # added constraint: constraint((T0310)P192.CB, (T0310)M212.CB) [> 3.8430 = 6.4050 < 8.3265] w=0.9130 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)A171.CB) [> 4.0983 = 6.8305 < 8.8796] w=0.9110 to align # Constraint # added constraint: constraint((T0310)G12.CA, (T0310)A171.CB) [> 3.3562 = 5.5937 < 7.2718] w=0.9110 to align # Constraint # added constraint: constraint((T0310)L35.CB, (T0310)A76.CB) [> 3.4300 = 5.7167 < 7.4317] w=0.9110 to align # Constraint # added constraint: constraint((T0310)I134.CB, (T0310)V172.CB) [> 4.2578 = 7.0963 < 9.2252] w=0.9110 to align # Constraint # added constraint: constraint((T0310)G139.CA, (T0310)V172.CB) [> 3.8195 = 6.3658 < 8.2755] w=0.9110 to align # Constraint # added constraint: constraint((T0310)L140.CB, (T0310)Q173.CB) [> 3.7764 = 6.2939 < 8.1821] w=0.9110 to align # Constraint # added constraint: constraint((T0310)E307.CB, (T0310)H318.CB) [> 4.2453 = 7.0755 < 9.1982] w=0.8923 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)L253.CB) [> 4.5625 = 7.6041 < 9.8853] w=0.8923 to align # Constraint # added constraint: constraint((T0310)I218.CB, (T0310)T252.CB) [> 3.6783 = 6.1304 < 7.9696] w=0.8923 to align # Constraint # added constraint: constraint((T0310)G194.CA, (T0310)H214.CB) [> 3.9934 = 6.6557 < 8.6524] w=0.8923 to align # Constraint # added constraint: constraint((T0310)S225.CB, (T0310)D258.CB) [> 2.7950 = 4.6584 < 6.0559] w=0.8903 to align # Constraint # added constraint: constraint((T0310)I319.CB, (T0310)D328.CB) [> 3.9700 = 6.6167 < 8.6017] w=0.8758 to align # Constraint # added constraint: constraint((T0310)H256.CB, (T0310)D310.CB) [> 4.2899 = 7.1498 < 9.2947] w=0.8758 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)T332.CB) [> 4.5794 = 7.6324 < 9.9221] w=0.8758 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)I330.CB) [> 4.5888 = 7.6481 < 9.9425] w=0.8758 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)G194.CA) [> 4.5761 = 7.6269 < 9.9149] w=0.8758 to align # Constraint # added constraint: constraint((T0310)G194.CA, (T0310)S215.CB) [> 3.9742 = 6.6237 < 8.6108] w=0.8716 to align # Constraint # added constraint: constraint((T0310)G6.CA, (T0310)M186.CB) [> 3.4499 = 5.7499 < 7.4749] w=0.8696 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)L140.CB) [> 4.2287 = 7.0478 < 9.1622] w=0.8696 to align # Constraint # added constraint: constraint((T0310)R10.CB, (T0310)M186.CB) [> 3.3190 = 5.5316 < 7.1911] w=0.8696 to align # Constraint # added constraint: constraint((T0310)L16.CB, (T0310)G137.CA) [> 3.4571 = 5.7618 < 7.4903] w=0.8696 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)T159.CB) [> 3.4049 = 5.6747 < 7.3772] w=0.8696 to align # Constraint # added constraint: constraint((T0310)L35.CB, (T0310)L155.CB) [> 4.4113 = 7.3521 < 9.5578] w=0.8696 to align # Constraint # added constraint: constraint((T0310)L35.CB, (T0310)L158.CB) [> 3.4492 = 5.7488 < 7.4734] w=0.8696 to align # Constraint # added constraint: constraint((T0310)Q38.CB, (T0310)L158.CB) [> 3.8355 = 6.3925 < 8.3103] w=0.8696 to align # Constraint # added constraint: constraint((T0310)P111.CB, (T0310)G139.CA) [> 4.6654 = 7.7757 < 10.1084] w=0.8696 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)G144.CA) [> 4.2311 = 7.0519 < 9.1674] w=0.8696 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)G144.CA) [> 2.8571 = 4.7619 < 6.1905] w=0.8696 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)G145.CA) [> 3.5614 = 5.9357 < 7.7164] w=0.8696 to align # Constraint # added constraint: constraint((T0310)T332.CB, (T0310)W352.CB) [> 4.3585 = 7.2642 < 9.4435] w=0.8696 to align # Constraint # added constraint: constraint((T0310)V312.CB, (T0310)T337.CB) [> 3.6114 = 6.0191 < 7.8248] w=0.8696 to align # Constraint # added constraint: constraint((T0310)R296.CB, (T0310)Y322.CB) [> 4.1729 = 6.9549 < 9.0414] w=0.8696 to align # Constraint # added constraint: constraint((T0310)R257.CB, (T0310)V309.CB) [> 4.1411 = 6.9018 < 8.9723] w=0.8696 to align # Constraint # added constraint: constraint((T0310)T252.CB, (T0310)L295.CB) [> 3.9130 = 6.5216 < 8.4781] w=0.8696 to align # Constraint # added constraint: constraint((T0310)C247.CB, (T0310)H326.CB) [> 3.6177 = 6.0296 < 7.8385] w=0.8696 to align # Constraint # added constraint: constraint((T0310)P244.CB, (T0310)E303.CB) [> 3.9318 = 6.5529 < 8.5188] w=0.8696 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)D328.CB) [> 4.4368 = 7.3947 < 9.6131] w=0.8696 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)L250.CB) [> 4.3039 = 7.1731 < 9.3251] w=0.8696 to align # Constraint # added constraint: constraint((T0310)I218.CB, (T0310)E251.CB) [> 2.9888 = 4.9813 < 6.4757] w=0.8696 to align # Constraint # added constraint: constraint((T0310)G217.CA, (T0310)E298.CB) [> 3.1721 = 5.2869 < 6.8730] w=0.8696 to align # Constraint # added constraint: constraint((T0310)S195.CB, (T0310)S215.CB) [> 4.1072 = 6.8454 < 8.8990] w=0.8696 to align # Constraint # added constraint: constraint((T0310)R193.CB, (T0310)G213.CA) [> 3.6759 = 6.1264 < 7.9644] w=0.8696 to align # Constraint # added constraint: constraint((T0310)L142.CB, (T0310)N152.CB) [> 4.1193 = 6.8655 < 8.9252] w=0.8696 to align # Constraint # added constraint: constraint((T0310)V114.CB, (T0310)L140.CB) [> 4.5562 = 7.5936 < 9.8717] w=0.8696 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)L235.CB) [> 3.7905 = 6.3175 < 8.2127] w=0.8551 to align # Constraint # added constraint: constraint((T0310)R96.CB, (T0310)L105.CB) [> 3.7422 = 6.2370 < 8.1081] w=0.8551 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)A83.CB) [> 2.8460 = 4.7433 < 6.1663] w=0.8489 to align # Constraint # added constraint: constraint((T0310)K231.CB, (T0310)V331.CB) [> 4.2917 = 7.1528 < 9.2986] w=0.8344 to align # Constraint # added constraint: constraint((T0310)K143.CB, (T0310)V175.CB) [> 3.4792 = 5.7986 < 7.5381] w=0.8302 to align # Constraint # added constraint: constraint((T0310)L260.CB, (T0310)V308.CB) [> 3.0928 = 5.1546 < 6.7010] w=0.8302 to align # Constraint # added constraint: constraint((T0310)I316.CB, (T0310)V345.CB) [> 3.9838 = 6.6396 < 8.6315] w=0.8302 to align # Constraint # added constraint: constraint((T0310)H320.CB, (T0310)V345.CB) [> 4.0989 = 6.8315 < 8.8809] w=0.8302 to align # Constraint # added constraint: constraint((T0310)G12.CA, (T0310)E170.CB) [> 3.3310 = 5.5517 < 7.2172] w=0.8282 to align # Constraint # added constraint: constraint((T0310)M8.CB, (T0310)E170.CB) [> 2.8028 = 4.6713 < 6.0727] w=0.8282 to align # Constraint # added constraint: constraint((T0310)A133.CB, (T0310)I191.CB) [> 4.2935 = 7.1558 < 9.3026] w=0.8137 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)P192.CB) [> 4.4697 = 7.4495 < 9.6844] w=0.8137 to align # Constraint # added constraint: constraint((T0310)H256.CB, (T0310)V308.CB) [> 4.5677 = 7.6129 < 9.8967] w=0.8137 to align # Constraint # added constraint: constraint((T0310)S228.CB, (T0310)V331.CB) [> 4.5125 = 7.5208 < 9.7771] w=0.8137 to align # Constraint # added constraint: constraint((T0310)H320.CB, (T0310)D346.CB) [> 3.1425 = 5.2375 < 6.8087] w=0.8137 to align # Constraint # added constraint: constraint((T0310)A25.CB, (T0310)A135.CB) [> 4.2756 = 7.1260 < 9.2638] w=0.8075 to align # Constraint # added constraint: constraint((T0310)H30.CB, (T0310)A162.CB) [> 2.5483 = 4.2472 < 5.5214] w=0.8075 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)L158.CB) [> 3.4871 = 5.8117 < 7.5553] w=0.8075 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)A162.CB) [> 2.6295 = 4.3826 < 5.6974] w=0.8075 to align # Constraint # added constraint: constraint((T0310)L34.CB, (T0310)A162.CB) [> 3.3305 = 5.5509 < 7.2161] w=0.8075 to align # Constraint # added constraint: constraint((T0310)G113.CA, (T0310)G137.CA) [> 4.6625 = 7.7708 < 10.1020] w=0.8075 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)I202.CB) [> 4.3282 = 7.2137 < 9.3778] w=0.8075 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)N152.CB) [> 4.2502 = 7.0837 < 9.2088] w=0.8075 to align # Constraint # added constraint: constraint((T0310)G217.CA, (T0310)S324.CB) [> 2.7783 = 4.6305 < 6.0197] w=0.8075 to align # Constraint # added constraint: constraint((T0310)A338.CB, (T0310)W352.CB) [> 2.9957 = 4.9928 < 6.4907] w=0.8075 to align # Constraint # added constraint: constraint((T0310)S294.CB, (T0310)C305.CB) [> 3.2000 = 5.3334 < 6.9334] w=0.8075 to align # Constraint # added constraint: constraint((T0310)V229.CB, (T0310)L259.CB) [> 4.0206 = 6.7009 < 8.7112] w=0.8075 to align # Constraint # added constraint: constraint((T0310)S228.CB, (T0310)E333.CB) [> 4.1950 = 6.9917 < 9.0892] w=0.8075 to align # Constraint # added constraint: constraint((T0310)S225.CB, (T0310)L259.CB) [> 3.1014 = 5.1691 < 6.7198] w=0.8075 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)L259.CB) [> 3.7950 = 6.3249 < 8.2224] w=0.8075 to align # Constraint # added constraint: constraint((T0310)C219.CB, (T0310)S347.CB) [> 4.2937 = 7.1562 < 9.3030] w=0.8075 to align # Constraint # added constraint: constraint((T0310)E251.CB, (T0310)L304.CB) [> 3.9572 = 6.5953 < 8.5739] w=0.8075 to align # Constraint # added constraint: constraint((T0310)A249.CB, (T0310)G300.CA) [> 4.1833 = 6.9722 < 9.0639] w=0.8075 to align # Constraint # added constraint: constraint((T0310)D224.CB, (T0310)T337.CB) [> 3.8057 = 6.3429 < 8.2457] w=0.8075 to align # Constraint # added constraint: constraint((T0310)I218.CB, (T0310)T297.CB) [> 4.4886 = 7.4810 < 9.7253] w=0.8075 to align # Constraint # added constraint: constraint((T0310)L141.CB, (T0310)V175.CB) [> 4.0314 = 6.7190 < 8.7348] w=0.7868 to align # Constraint # added constraint: constraint((T0310)G139.CA, (T0310)A171.CB) [> 3.4088 = 5.6814 < 7.3858] w=0.7868 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)R80.CB) [> 3.9266 = 6.5443 < 8.5076] w=0.7868 to align # Constraint # added constraint: constraint((T0310)I190.CB, (T0310)M212.CB) [> 4.4219 = 7.3699 < 9.5809] w=0.7702 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)Y322.CB) [> 4.3626 = 7.2710 < 9.4523] w=0.7681 to align # Constraint # added constraint: constraint((T0310)V236.CB, (T0310)M271.CB) [> 3.2123 = 5.3538 < 6.9600] w=0.7681 to align # Constraint # added constraint: constraint((T0310)G144.CA, (T0310)N176.CB) [> 4.1130 = 6.8551 < 8.9116] w=0.7681 to align # Constraint # added constraint: constraint((T0310)S86.CB, (T0310)A135.CB) [> 2.7831 = 4.6385 < 6.0300] w=0.7660 to align # Constraint # added constraint: constraint((T0310)Q5.CB, (T0310)V175.CB) [> 3.7390 = 6.2317 < 8.1012] w=0.7660 to align # Constraint # added constraint: constraint((T0310)L235.CB, (T0310)L250.CB) [> 3.8327 = 6.3878 < 8.3042] w=0.7660 to align # Constraint # added constraint: constraint((T0310)A25.CB, (T0310)A84.CB) [> 3.6941 = 6.1569 < 8.0040] w=0.7660 to align # Constraint # added constraint: constraint((T0310)D124.CB, (T0310)S151.CB) [> 2.9597 = 4.9328 < 6.4126] w=0.7495 to align # Constraint # added constraint: constraint((T0310)G6.CA, (T0310)I187.CB) [> 4.2733 = 7.1221 < 9.2587] w=0.7453 to align # Constraint # added constraint: constraint((T0310)I27.CB, (T0310)A162.CB) [> 3.4597 = 5.7663 < 7.4961] w=0.7453 to align # Constraint # added constraint: constraint((T0310)G217.CA, (T0310)C247.CB) [> 3.5875 = 5.9791 < 7.7729] w=0.7453 to align # Constraint # added constraint: constraint((T0310)I330.CB, (T0310)L342.CB) [> 4.1179 = 6.8631 < 8.9221] w=0.7453 to align # Constraint # added constraint: constraint((T0310)H29.CB, (T0310)R80.CB) [> 3.7750 = 6.2917 < 8.1793] w=0.7453 to align # Constraint # added constraint: constraint((T0310)G217.CA, (T0310)E251.CB) [> 4.2996 = 7.1660 < 9.3158] w=0.7453 to align # Constraint # added constraint: constraint((T0310)L342.CB, (T0310)W352.CB) [> 4.0356 = 6.7260 < 8.7438] w=0.7453 to align # Constraint # added constraint: constraint((T0310)S325.CB, (T0310)D346.CB) [> 3.0620 = 5.1033 < 6.6343] w=0.7453 to align # Constraint # added constraint: constraint((T0310)E298.CB, (T0310)S324.CB) [> 4.4024 = 7.3373 < 9.5385] w=0.7453 to align # Constraint # added constraint: constraint((T0310)L295.CB, (T0310)E307.CB) [> 4.1255 = 6.8759 < 8.9386] w=0.7453 to align # Constraint # added constraint: constraint((T0310)K231.CB, (T0310)N353.CB) [> 4.0074 = 6.6790 < 8.6826] w=0.7453 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)H256.CB) [> 3.8863 = 6.4773 < 8.4204] w=0.7453 to align # Constraint # added constraint: constraint((T0310)I218.CB, (T0310)Y322.CB) [> 3.3806 = 5.6343 < 7.3246] w=0.7453 to align # Constraint # added constraint: constraint((T0310)T109.CB, (T0310)S136.CB) [> 4.4340 = 7.3901 < 9.6071] w=0.7453 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)L72.CB) [> 3.5839 = 5.9731 < 7.7650] w=0.7453 to align # Constraint # added constraint: constraint((T0310)R92.CB, (T0310)Q107.CB) [> 3.4523 = 5.7538 < 7.4800] w=0.7308 to align # Constraint # added constraint: constraint((T0310)K143.CB, (T0310)T177.CB) [> 3.7292 = 6.2154 < 8.0801] w=0.7288 to align # Constraint # added constraint: constraint((T0310)A25.CB, (T0310)A83.CB) [> 2.9030 = 4.8383 < 6.2898] w=0.7246 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)L79.CB) [> 3.3165 = 5.5275 < 7.1858] w=0.7246 to align # Constraint # added constraint: constraint((T0310)L35.CB, (T0310)L72.CB) [> 3.9279 = 6.5466 < 8.5105] w=0.7246 to align # Constraint # added constraint: constraint((T0310)T159.CB, (T0310)V172.CB) [> 3.3023 = 5.5038 < 7.1549] w=0.7246 to align # Constraint # added constraint: constraint((T0310)T159.CB, (T0310)V168.CB) [> 3.0241 = 5.0402 < 6.5522] w=0.7246 to align # Constraint # added constraint: constraint((T0310)T233.CB, (T0310)M271.CB) [> 3.4594 = 5.7657 < 7.4954] w=0.7101 to align # Constraint # added constraint: constraint((T0310)L94.CB, (T0310)Q107.CB) [> 3.4782 = 5.7969 < 7.5360] w=0.7081 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)L264.CB) [> 3.8134 = 6.3557 < 8.2624] w=0.7081 to align # Constraint # added constraint: constraint((T0310)V199.CB, (T0310)H214.CB) [> 3.8302 = 6.3837 < 8.2988] w=0.7060 to align # Constraint # added constraint: constraint((T0310)V2.CB, (T0310)D184.CB) [> 4.0482 = 6.7469 < 8.7710] w=0.7039 to align # Constraint # added constraint: constraint((T0310)I82.CB, (T0310)A135.CB) [> 2.9771 = 4.9619 < 6.4504] w=0.7039 to align # Constraint # added constraint: constraint((T0310)P21.CB, (T0310)Q87.CB) [> 2.8635 = 4.7725 < 6.2043] w=0.7039 to align # Constraint # added constraint: constraint((T0310)D124.CB, (T0310)N152.CB) [> 3.8608 = 6.4347 < 8.3651] w=0.7039 to align # Constraint # added constraint: constraint((T0310)L16.CB, (T0310)A171.CB) [> 3.3616 = 5.6027 < 7.2836] w=0.7039 to align # Constraint # added constraint: constraint((T0310)G12.CA, (T0310)K169.CB) [> 3.9167 = 6.5279 < 8.4863] w=0.7039 to align # Constraint # added constraint: constraint((T0310)I330.CB, (T0310)V345.CB) [> 4.4478 = 7.4130 < 9.6369] w=0.7039 to align # Constraint # added constraint: constraint((T0310)V114.CB, (T0310)L189.CB) [> 4.5460 = 7.5766 < 9.8496] w=0.6894 to align # Constraint # added constraint: constraint((T0310)L140.CB, (T0310)A171.CB) [> 4.2752 = 7.1253 < 9.2628] w=0.6894 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)I190.CB) [> 4.5540 = 7.5900 < 9.8670] w=0.6894 to align # Constraint # added constraint: constraint((T0310)I191.CB, (T0310)V211.CB) [> 4.6047 = 7.6744 < 9.9767] w=0.6874 to align # Constraint # added constraint: constraint((T0310)L105.CB, (T0310)W393.CB) [> 3.8047 = 6.3411 < 8.2435] w=0.6853 to align # Constraint # added constraint: constraint((T0310)Q107.CB, (T0310)T391.CB) [> 3.2194 = 5.3657 < 6.9754] w=0.6853 to align # Constraint # added constraint: constraint((T0310)Q107.CB, (T0310)K392.CB) [> 3.9567 = 6.5946 < 8.5729] w=0.6853 to align # Constraint # added constraint: constraint((T0310)Q107.CB, (T0310)W393.CB) [> 3.2626 = 5.4377 < 7.0690] w=0.6853 to align # Constraint # added constraint: constraint((T0310)V110.CB, (T0310)L389.CB) [> 3.8703 = 6.4504 < 8.3856] w=0.6853 to align # Constraint # added constraint: constraint((T0310)I112.CB, (T0310)L389.CB) [> 3.9199 = 6.5332 < 8.4931] w=0.6853 to align # Constraint # added constraint: constraint((T0310)S136.CB, (T0310)L389.CB) [> 3.0895 = 5.1491 < 6.6939] w=0.6853 to align # Constraint # added constraint: constraint((T0310)L75.CB, (T0310)L126.CB) [> 3.5273 = 5.8789 < 7.6426] w=0.6853 to align # Constraint # added constraint: constraint((T0310)G13.CA, (T0310)P111.CB) [> 4.6177 = 7.6962 < 10.0050] w=0.6832 to align # Constraint # added constraint: constraint((T0310)N138.CB, (T0310)D188.CB) [> 4.5524 = 7.5873 < 9.8635] w=0.6832 to align # Constraint # added constraint: constraint((T0310)I27.CB, (T0310)I134.CB) [> 4.3098 = 7.1830 < 9.3379] w=0.6832 to align # Constraint # added constraint: constraint((T0310)Q38.CB, (T0310)I154.CB) [> 4.3106 = 7.1843 < 9.3396] w=0.6832 to align # Constraint # added constraint: constraint((T0310)A45.CB, (T0310)S151.CB) [> 3.2283 = 5.3805 < 6.9946] w=0.6832 to align # Constraint # added constraint: constraint((T0310)A45.CB, (T0310)I154.CB) [> 3.6357 = 6.0595 < 7.8774] w=0.6832 to align # Constraint # added constraint: constraint((T0310)N46.CB, (T0310)S151.CB) [> 3.0675 = 5.1126 < 6.6464] w=0.6832 to align # Constraint # added constraint: constraint((T0310)P244.CB, (T0310)Y299.CB) [> 4.3162 = 7.1936 < 9.3517] w=0.6832 to align # Constraint # added constraint: constraint((T0310)V331.CB, (T0310)W352.CB) [> 4.5251 = 7.5418 < 9.8043] w=0.6832 to align # Constraint # added constraint: constraint((T0310)E120.CB, (T0310)G145.CA) [> 4.0821 = 6.8035 < 8.8446] w=0.6832 to align # Constraint # added constraint: constraint((T0310)S294.CB, (T0310)E303.CB) [> 4.2025 = 7.0042 < 9.1054] w=0.6832 to align # Constraint # added constraint: constraint((T0310)K240.CB, (T0310)L304.CB) [> 4.1933 = 6.9889 < 9.0855] w=0.6832 to align # Constraint # added constraint: constraint((T0310)A227.CB, (T0310)L259.CB) [> 4.1471 = 6.9118 < 8.9853] w=0.6832 to align # Constraint # added constraint: constraint((T0310)G217.CA, (T0310)T327.CB) [> 4.3809 = 7.3015 < 9.4920] w=0.6832 to align # Constraint # added constraint: constraint((T0310)L142.CB, (T0310)V172.CB) [> 4.1380 = 6.8967 < 8.9657] w=0.6687 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)A130.CB) [> 3.7620 = 6.2701 < 8.1511] w=0.6667 to align # Constraint # added constraint: constraint((T0310)L72.CB, (T0310)C125.CB) [> 3.7049 = 6.1748 < 8.0272] w=0.6646 to align # Constraint # added constraint: constraint((T0310)L105.CB, (T0310)L394.CB) [> 4.1561 = 6.9268 < 9.0049] w=0.6646 to align # Constraint # added constraint: constraint((T0310)I112.CB, (T0310)L388.CB) [> 3.6276 = 6.0460 < 7.8598] w=0.6646 to align # Constraint # added constraint: constraint((T0310)L235.CB, (T0310)L253.CB) [> 3.7397 = 6.2328 < 8.1026] w=0.6646 to align # Constraint # added constraint: constraint((T0310)I268.CB, (T0310)I306.CB) [> 4.3312 = 7.2187 < 9.3843] w=0.6646 to align # Constraint # added constraint: constraint((T0310)L132.CB, (T0310)L388.CB) [> 3.3906 = 5.6510 < 7.3463] w=0.6646 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)A131.CB) [> 3.8606 = 6.4344 < 8.3647] w=0.6625 to align # Constraint # added constraint: constraint((T0310)L50.CB, (T0310)A148.CB) [> 3.4553 = 5.7588 < 7.4864] w=0.6625 to align # Constraint # added constraint: constraint((T0310)A130.CB, (T0310)L140.CB) [> 3.2664 = 5.4441 < 7.0773] w=0.6625 to align # Constraint # added constraint: constraint((T0310)A130.CB, (T0310)L142.CB) [> 3.9799 = 6.6332 < 8.6232] w=0.6625 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)Q173.CB) [> 3.5656 = 5.9427 < 7.7255] w=0.6625 to align # Constraint # added constraint: constraint((T0310)H156.CB, (T0310)L174.CB) [> 2.8437 = 4.7395 < 6.1614] w=0.6625 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)V181.CB) [> 3.1233 = 5.2055 < 6.7671] w=0.6625 to align # Constraint # added constraint: constraint((T0310)L141.CB, (T0310)L174.CB) [> 3.8271 = 6.3785 < 8.2920] w=0.6625 to align # Constraint # added constraint: constraint((T0310)K143.CB, (T0310)N176.CB) [> 3.8035 = 6.3392 < 8.2410] w=0.6625 to align # Constraint # added constraint: constraint((T0310)G13.CA, (T0310)A171.CB) [> 4.1913 = 6.9855 < 9.0812] w=0.6625 to align # Constraint # added constraint: constraint((T0310)P192.CB, (T0310)H214.CB) [> 4.3713 = 7.2856 < 9.4712] w=0.6625 to align # Constraint # added constraint: constraint((T0310)S121.CB, (T0310)A148.CB) [> 3.1797 = 5.2995 < 6.8894] w=0.6625 to align # Constraint # added constraint: constraint((T0310)T233.CB, (T0310)I268.CB) [> 3.1893 = 5.3155 < 6.9102] w=0.6460 to align # Constraint # added constraint: constraint((T0310)C125.CB, (T0310)S151.CB) [> 3.1256 = 5.2094 < 6.7722] w=0.6460 to align # Constraint # added constraint: constraint((T0310)I191.CB, (T0310)G213.CA) [> 4.2835 = 7.1392 < 9.2809] w=0.6439 to align # Constraint # added constraint: constraint((T0310)T109.CB, (T0310)T391.CB) [> 3.6062 = 6.0103 < 7.8134] w=0.6439 to align # Constraint # added constraint: constraint((T0310)V110.CB, (T0310)T390.CB) [> 3.2942 = 5.4903 < 7.1374] w=0.6439 to align # Constraint # added constraint: constraint((T0310)V110.CB, (T0310)K392.CB) [> 3.3936 = 5.6561 < 7.3529] w=0.6439 to align # Constraint # added constraint: constraint((T0310)P111.CB, (T0310)L389.CB) [> 3.8282 = 6.3803 < 8.2943] w=0.6439 to align # Constraint # added constraint: constraint((T0310)V236.CB, (T0310)I268.CB) [> 3.7156 = 6.1926 < 8.0504] w=0.6439 to align # Constraint # added constraint: constraint((T0310)F265.CB, (T0310)I306.CB) [> 3.6278 = 6.0464 < 7.8603] w=0.6439 to align # Constraint # added constraint: constraint((T0310)L50.CB, (T0310)S151.CB) [> 4.0499 = 6.7498 < 8.7748] w=0.6418 to align # Constraint # added constraint: constraint((T0310)P21.CB, (T0310)S86.CB) [> 3.3195 = 5.5325 < 7.1922] w=0.6418 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)E170.CB) [> 3.3810 = 5.6350 < 7.3255] w=0.6418 to align # Constraint # added constraint: constraint((T0310)L35.CB, (T0310)L79.CB) [> 4.3632 = 7.2720 < 9.4537] w=0.6418 to align # Constraint # added constraint: constraint((T0310)T36.CB, (T0310)A76.CB) [> 3.4469 = 5.7449 < 7.4683] w=0.6418 to align # Constraint # added constraint: constraint((T0310)A45.CB, (T0310)H150.CB) [> 3.2133 = 5.3555 < 6.9621] w=0.6418 to align # Constraint # added constraint: constraint((T0310)E182.CB, (T0310)A205.CB) [> 3.2952 = 5.4921 < 7.1397] w=0.6418 to align # Constraint # added constraint: constraint((T0310)I190.CB, (T0310)A206.CB) [> 3.4665 = 5.7775 < 7.5107] w=0.6418 to align # Constraint # added constraint: constraint((T0310)N248.CB, (T0310)T356.CB) [> 3.3667 = 5.6112 < 7.2946] w=0.6418 to align # Constraint # added constraint: constraint((T0310)V329.CB, (T0310)A354.CB) [> 4.2225 = 7.0375 < 9.1488] w=0.6418 to align # Constraint # added constraint: constraint((T0310)V329.CB, (T0310)S355.CB) [> 3.5084 = 5.8473 < 7.6015] w=0.6418 to align # Constraint # added constraint: constraint((T0310)L264.CB, (T0310)I306.CB) [> 4.1238 = 6.8731 < 8.9350] w=0.6418 to align # Constraint # added constraint: constraint((T0310)P127.CB, (T0310)R193.CB) [> 3.5402 = 5.9003 < 7.6704] w=0.6418 to align # Constraint # added constraint: constraint((T0310)I112.CB, (T0310)S136.CB) [> 4.5705 = 7.6175 < 9.9028] w=0.6273 to align # Constraint # added constraint: constraint((T0310)H256.CB, (T0310)N311.CB) [> 3.9555 = 6.5924 < 8.5701] w=0.6273 to align # Constraint # added constraint: constraint((T0310)L79.CB, (T0310)A131.CB) [> 2.9983 = 4.9971 < 6.4962] w=0.6253 to align # Constraint # added constraint: constraint((T0310)V232.CB, (T0310)L264.CB) [> 3.9634 = 6.6056 < 8.5872] w=0.6253 to align # Constraint # added constraint: constraint((T0310)V93.CB, (T0310)Q107.CB) [> 4.1070 = 6.8451 < 8.8986] w=0.6232 to align # Constraint # added constraint: constraint((T0310)G144.CA, (T0310)V175.CB) [> 4.2845 = 7.1409 < 9.2831] w=0.6232 to align # Constraint # added constraint: constraint((T0310)Q107.CB, (T0310)L394.CB) [> 4.4568 = 7.4281 < 9.6565] w=0.6232 to align # Constraint # added constraint: constraint((T0310)V108.CB, (T0310)L394.CB) [> 4.1249 = 6.8749 < 8.9373] w=0.6232 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)L388.CB) [> 3.8794 = 6.4657 < 8.4054] w=0.6232 to align # Constraint # added constraint: constraint((T0310)L132.CB, (T0310)G384.CA) [> 3.0986 = 5.1644 < 6.7137] w=0.6232 to align # Constraint # added constraint: constraint((T0310)L132.CB, (T0310)L385.CB) [> 3.2821 = 5.4701 < 7.1112] w=0.6232 to align # Constraint # added constraint: constraint((T0310)A133.CB, (T0310)L388.CB) [> 3.0620 = 5.1034 < 6.6344] w=0.6232 to align # Constraint # added constraint: constraint((T0310)S136.CB, (T0310)L385.CB) [> 3.3498 = 5.5830 < 7.2579] w=0.6232 to align # Constraint # added constraint: constraint((T0310)N138.CB, (T0310)L388.CB) [> 3.3565 = 5.5941 < 7.2723] w=0.6232 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)Q128.CB) [> 3.0440 = 5.0734 < 6.5954] w=0.6232 to align # Constraint # added constraint: constraint((T0310)G6.CA, (T0310)Q173.CB) [> 4.2392 = 7.0653 < 9.1849] w=0.6211 to align # Constraint # added constraint: constraint((T0310)Q5.CB, (T0310)Q173.CB) [> 2.6294 = 4.3823 < 5.6970] w=0.6211 to align # Constraint # added constraint: constraint((T0310)V2.CB, (T0310)V175.CB) [> 3.7421 = 6.2368 < 8.1078] w=0.6211 to align # Constraint # added constraint: constraint((T0310)L250.CB, (T0310)L304.CB) [> 4.1373 = 6.8955 < 8.9642] w=0.6211 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)E251.CB) [> 4.5159 = 7.5265 < 9.7844] w=0.6211 to align # Constraint # added constraint: constraint((T0310)R193.CB, (T0310)C247.CB) [> 4.6329 = 7.7215 < 10.0380] w=0.6211 to align # Constraint # added constraint: constraint((T0310)S239.CB, (T0310)E251.CB) [> 4.1993 = 6.9989 < 9.0985] w=0.6211 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)V345.CB) [> 4.6205 = 7.7009 < 10.0111] w=0.6211 to align # Constraint # added constraint: constraint((T0310)L19.CB, (T0310)G137.CA) [> 4.4213 = 7.3688 < 9.5794] w=0.6211 to align # Constraint # added constraint: constraint((T0310)G13.CA, (T0310)G137.CA) [> 4.4854 = 7.4756 < 9.7183] w=0.6211 to align # Constraint # added constraint: constraint((T0310)F341.CB, (T0310)V350.CB) [> 4.4247 = 7.3745 < 9.5869] w=0.6211 to align # Constraint # added constraint: constraint((T0310)L260.CB, (T0310)I306.CB) [> 4.4717 = 7.4528 < 9.6886] w=0.6211 to align # Constraint # added constraint: constraint((T0310)L254.CB, (T0310)V308.CB) [> 4.6745 = 7.7908 < 10.1281] w=0.6211 to align # Constraint # added constraint: constraint((T0310)T252.CB, (T0310)I319.CB) [> 4.5823 = 7.6372 < 9.9283] w=0.6211 to align # Constraint # added constraint: constraint((T0310)E251.CB, (T0310)G300.CA) [> 4.5090 = 7.5149 < 9.7694] w=0.6211 to align # Constraint # added constraint: constraint((T0310)N248.CB, (T0310)C349.CB) [> 4.1549 = 6.9248 < 9.0022] w=0.6211 to align # Constraint # added constraint: constraint((T0310)A246.CB, (T0310)G300.CA) [> 4.6170 = 7.6950 < 10.0035] w=0.6211 to align # Constraint # added constraint: constraint((T0310)R122.CB, (T0310)A246.CB) [> 3.9321 = 6.5534 < 8.5195] w=0.6211 to align # Constraint # added constraint: constraint((T0310)N46.CB, (T0310)D124.CB) [> 3.9184 = 6.5306 < 8.4898] w=0.6211 to align # Constraint # added constraint: constraint((T0310)M8.CB, (T0310)Q173.CB) [> 3.7963 = 6.3272 < 8.2253] w=0.6211 to align # Constraint # added constraint: constraint((T0310)V229.CB, (T0310)Q267.CB) [> 3.7517 = 6.2529 < 8.1288] w=0.6066 to align # Constraint # added constraint: constraint((T0310)D124.CB, (T0310)A148.CB) [> 2.4257 = 4.0428 < 5.2556] w=0.6025 to align # Constraint # added constraint: constraint((T0310)R24.CB, (T0310)S86.CB) [> 3.4994 = 5.8324 < 7.5821] w=0.6004 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)L79.CB) [> 3.4412 = 5.7354 < 7.4559] w=0.6004 to align # Constraint # added constraint: constraint((T0310)L35.CB, (T0310)L75.CB) [> 3.7038 = 6.1729 < 8.0248] w=0.6004 to align # Constraint # added constraint: constraint((T0310)R39.CB, (T0310)L72.CB) [> 3.0874 = 5.1457 < 6.6894] w=0.6004 to align # Constraint # added constraint: constraint((T0310)G213.CA, (T0310)S373.CB) [> 3.1779 = 5.2965 < 6.8855] w=0.6004 to align # Constraint # added constraint: constraint((T0310)D238.CB, (T0310)S355.CB) [> 2.7283 = 4.5472 < 5.9114] w=0.6004 to align # Constraint # added constraint: constraint((T0310)A348.CB, (T0310)G367.CA) [> 2.9725 = 4.9542 < 6.4404] w=0.6004 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)S68.CB) [> 2.8321 = 4.7202 < 6.1363] w=0.6004 to align # Constraint # added constraint: constraint((T0310)S121.CB, (T0310)E147.CB) [> 2.7616 = 4.6027 < 5.9835] w=0.6004 to align # Constraint # added constraint: constraint((T0310)L235.CB, (T0310)V331.CB) [> 4.4014 = 7.3356 < 9.5363] w=0.5839 to align # Constraint # added constraint: constraint((T0310)V229.CB, (T0310)L264.CB) [> 3.5805 = 5.9674 < 7.7576] w=0.5839 to align # Constraint # added constraint: constraint((T0310)V236.CB, (T0310)L272.CB) [> 3.8708 = 6.4514 < 8.3868] w=0.5839 to align # Constraint # added constraint: constraint((T0310)L94.CB, (T0310)E106.CB) [> 3.7070 = 6.1784 < 8.0319] w=0.5839 to align # Constraint # added constraint: constraint((T0310)T252.CB, (T0310)L304.CB) [> 4.4048 = 7.3414 < 9.5438] w=0.5818 to align # Constraint # added constraint: constraint((T0310)L94.CB, (T0310)L105.CB) [> 3.2657 = 5.4428 < 7.0756] w=0.5818 to align # Constraint # added constraint: constraint((T0310)E3.CB, (T0310)D184.CB) [> 4.3850 = 7.3083 < 9.5008] w=0.5797 to align # Constraint # added constraint: constraint((T0310)G194.CA, (T0310)G213.CA) [> 4.2999 = 7.1665 < 9.3164] w=0.5797 to align # Constraint # added constraint: constraint((T0310)E104.CB, (T0310)L395.CB) [> 4.3323 = 7.2204 < 9.3866] w=0.5797 to align # Constraint # added constraint: constraint((T0310)L105.CB, (T0310)L395.CB) [> 3.0592 = 5.0986 < 6.6282] w=0.5797 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)I82.CB) [> 3.7475 = 6.2458 < 8.1196] w=0.5797 to align # Constraint # added constraint: constraint((T0310)A32.CB, (T0310)A83.CB) [> 4.1660 = 6.9433 < 9.0263] w=0.5797 to align # Constraint # added constraint: constraint((T0310)I42.CB, (T0310)C125.CB) [> 3.8965 = 6.4942 < 8.4424] w=0.5797 to align # Constraint # added constraint: constraint((T0310)N46.CB, (T0310)C125.CB) [> 3.6962 = 6.1604 < 8.0085] w=0.5797 to align # Constraint # added constraint: constraint((T0310)L50.CB, (T0310)S121.CB) [> 4.0879 = 6.8132 < 8.8572] w=0.5797 to align # Constraint # added constraint: constraint((T0310)R122.CB, (T0310)A245.CB) [> 2.7561 = 4.5935 < 5.9715] w=0.5797 to align # Constraint # added constraint: constraint((T0310)C125.CB, (T0310)L155.CB) [> 3.9043 = 6.5072 < 8.4593] w=0.5797 to align # Constraint # added constraint: constraint((T0310)I134.CB, (T0310)A171.CB) [> 4.1772 = 6.9621 < 9.0507] w=0.5797 to align # Constraint # added constraint: constraint((T0310)K146.CB, (T0310)T177.CB) [> 4.2093 = 7.0156 < 9.1202] w=0.5797 to align # Constraint # added constraint: constraint((T0310)N152.CB, (T0310)L174.CB) [> 3.6883 = 6.1472 < 7.9913] w=0.5797 to align # Constraint # added constraint: constraint((T0310)S195.CB, (T0310)E216.CB) [> 3.8909 = 6.4849 < 8.4303] w=0.5797 to align # Constraint # added constraint: constraint((T0310)H214.CB, (T0310)G365.CA) [> 3.2174 = 5.3624 < 6.9711] w=0.5797 to align # Constraint # added constraint: constraint((T0310)S215.CB, (T0310)G371.CA) [> 2.9902 = 4.9836 < 6.4787] w=0.5797 to align # Constraint # added constraint: constraint((T0310)E216.CB, (T0310)C247.CB) [> 3.6511 = 6.0852 < 7.9107] w=0.5797 to align # Constraint # added constraint: constraint((T0310)A348.CB, (T0310)F364.CB) [> 4.0187 = 6.6978 < 8.7071] w=0.5797 to align # Constraint # added constraint: constraint((T0310)Q5.CB, (T0310)L174.CB) [> 3.6222 = 6.0369 < 7.8480] w=0.5797 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)T69.CB) [> 3.0940 = 5.1566 < 6.7036] w=0.5797 to align # Constraint # added constraint: constraint((T0310)H256.CB, (T0310)V312.CB) [> 4.2073 = 7.0121 < 9.1158] w=0.5652 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)T332.CB) [> 4.5624 = 7.6041 < 9.8853] w=0.5652 to align # Constraint # added constraint: constraint((T0310)S121.CB, (T0310)G145.CA) [> 3.3875 = 5.6459 < 7.3397] w=0.5611 to align # Constraint # added constraint: constraint((T0310)A17.CB, (T0310)G113.CA) [> 4.2933 = 7.1554 < 9.3020] w=0.5590 to align # Constraint # added constraint: constraint((T0310)E251.CB, (T0310)E303.CB) [> 4.4493 = 7.4155 < 9.6401] w=0.5590 to align # Constraint # added constraint: constraint((T0310)R122.CB, (T0310)C247.CB) [> 4.4959 = 7.4932 < 9.7412] w=0.5590 to align # Constraint # added constraint: constraint((T0310)S324.CB, (T0310)A368.CB) [> 3.8878 = 6.4796 < 8.4235] w=0.5590 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)G145.CA) [> 4.5510 = 7.5850 < 9.8605] w=0.5590 to align # Constraint # added constraint: constraint((T0310)V2.CB, (T0310)V181.CB) [> 3.4456 = 5.7426 < 7.4654] w=0.5590 to align # Constraint # added constraint: constraint((T0310)S89.CB, (T0310)S136.CB) [> 3.9639 = 6.6066 < 8.5885] w=0.5590 to align # Constraint # added constraint: constraint((T0310)Q276.CB, (T0310)F285.CB) [> 4.0215 = 6.7025 < 8.7132] w=0.5590 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)V168.CB) [> 4.4960 = 7.4934 < 9.7414] w=0.5590 to align # Constraint # added constraint: constraint((T0310)R39.CB, (T0310)N73.CB) [> 3.9190 = 6.5316 < 8.4911] w=0.5590 to align # Constraint # added constraint: constraint((T0310)G194.CA, (T0310)C247.CB) [> 4.6132 = 7.6886 < 9.9952] w=0.5590 to align # Constraint # added constraint: constraint((T0310)T332.CB, (T0310)F341.CB) [> 4.5460 = 7.5767 < 9.8497] w=0.5590 to align # Constraint # added constraint: constraint((T0310)I218.CB, (T0310)G323.CA) [> 4.4128 = 7.3547 < 9.5611] w=0.5590 to align # Constraint # added constraint: constraint((T0310)Q128.CB, (T0310)L155.CB) [> 3.7037 = 6.1729 < 8.0248] w=0.5590 to align # Constraint # added constraint: constraint((T0310)E106.CB, (T0310)W393.CB) [> 4.2864 = 7.1440 < 9.2872] w=0.5404 to align # Constraint # added constraint: constraint((T0310)A32.CB, (T0310)G78.CA) [> 4.4817 = 7.4695 < 9.7103] w=0.5383 to align # Constraint # added constraint: constraint((T0310)A149.CB, (T0310)N176.CB) [> 3.0294 = 5.0491 < 6.5638] w=0.5383 to align # Constraint # added constraint: constraint((T0310)H156.CB, (T0310)V172.CB) [> 3.9958 = 6.6597 < 8.6576] w=0.5383 to align # Constraint # added constraint: constraint((T0310)A348.CB, (T0310)L366.CB) [> 3.4344 = 5.7241 < 7.4413] w=0.5383 to align # Constraint # added constraint: constraint((T0310)R153.CB, (T0310)N176.CB) [> 4.3491 = 7.2485 < 9.4230] w=0.5383 to align # Constraint # added constraint: constraint((T0310)E104.CB, (T0310)R396.CB) [> 3.2507 = 5.4178 < 7.0431] w=0.5383 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)V181.CB) [> 3.7885 = 6.3141 < 8.2084] w=0.5383 to align # Constraint # added constraint: constraint((T0310)S121.CB, (T0310)L289.CB) [> 3.7741 = 6.2902 < 8.1772] w=0.5383 to align # Constraint # added constraint: constraint((T0310)Q128.CB, (T0310)L142.CB) [> 3.8025 = 6.3375 < 8.2388] w=0.5383 to align # Constraint # added constraint: constraint((T0310)E147.CB, (T0310)L289.CB) [> 3.5468 = 5.9113 < 7.6847] w=0.5383 to align # Constraint # added constraint: constraint((T0310)Y243.CB, (T0310)Y288.CB) [> 3.6522 = 6.0871 < 7.9132] w=0.5383 to align # Constraint # added constraint: constraint((T0310)A245.CB, (T0310)Y288.CB) [> 4.3982 = 7.3303 < 9.5294] w=0.5383 to align # Constraint # added constraint: constraint((T0310)A245.CB, (T0310)L289.CB) [> 3.8802 = 6.4669 < 8.4070] w=0.5383 to align # Constraint # added constraint: constraint((T0310)E275.CB, (T0310)F285.CB) [> 3.5509 = 5.9182 < 7.6937] w=0.5383 to align # Constraint # added constraint: constraint((T0310)Y288.CB, (T0310)D301.CB) [> 3.9316 = 6.5526 < 8.5184] w=0.5383 to align # Constraint # added constraint: constraint((T0310)S86.CB, (T0310)S136.CB) [> 4.0893 = 6.8154 < 8.8600] w=0.5383 to align # Constraint # added constraint: constraint((T0310)V229.CB, (T0310)T262.CB) [> 3.6080 = 6.0133 < 7.8173] w=0.5383 to align # Constraint # added constraint: constraint((T0310)K240.CB, (T0310)L272.CB) [> 4.1761 = 6.9601 < 9.0481] w=0.5383 to align # Constraint # added constraint: constraint((T0310)H214.CB, (T0310)S373.CB) [> 3.5157 = 5.8595 < 7.6173] w=0.5383 to align # Constraint # added constraint: constraint((T0310)G144.CA, (T0310)L174.CB) [> 4.2836 = 7.1393 < 9.2810] w=0.5238 to align # Constraint # added constraint: constraint((T0310)Y243.CB, (T0310)F285.CB) [> 3.4436 = 5.7393 < 7.4612] w=0.5176 to align # Constraint # added constraint: constraint((T0310)V2.CB, (T0310)T177.CB) [> 4.1354 = 6.8923 < 8.9600] w=0.5176 to align # Constraint # added constraint: constraint((T0310)S325.CB, (T0310)V370.CB) [> 3.0678 = 5.1130 < 6.6469] w=0.5176 to align # Constraint # added constraint: constraint((T0310)H214.CB, (T0310)F364.CB) [> 3.7196 = 6.1994 < 8.0592] w=0.5176 to align # Constraint # added constraint: constraint((T0310)S85.CB, (T0310)A135.CB) [> 3.7545 = 6.2575 < 8.1347] w=0.5176 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)S86.CB) [> 4.0329 = 6.7216 < 8.7381] w=0.5176 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)L142.CB) [> 4.3574 = 7.2623 < 9.4410] w=0.5031 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)I255.CB) [> 4.6007 = 7.6678 < 9.9681] w=0.5031 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)L142.CB) [> 4.4445 = 7.4075 < 9.6297] w=0.5031 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)V312.CB) [> 4.3822 = 7.3036 < 9.4947] w=0.5031 to align # Constraint # added constraint: constraint((T0310)G194.CA, (T0310)E216.CB) [> 4.3274 = 7.2123 < 9.3760] w=0.4990 to align # Constraint # added constraint: constraint((T0310)L235.CB, (T0310)I268.CB) [> 3.6680 = 6.1133 < 7.9473] w=0.4990 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)A148.CB) [> 4.5874 = 7.6457 < 9.9394] w=0.4969 to align # Constraint # added constraint: constraint((T0310)P210.CB, (T0310)G387.CA) [> 4.1371 = 6.8951 < 8.9637] w=0.4969 to align # Constraint # added constraint: constraint((T0310)C349.CB, (T0310)F364.CB) [> 4.1045 = 6.8408 < 8.8930] w=0.4969 to align # Constraint # added constraint: constraint((T0310)C349.CB, (T0310)G365.CA) [> 4.2324 = 7.0540 < 9.1702] w=0.4969 to align # Constraint # added constraint: constraint((T0310)V110.CB, (T0310)T391.CB) [> 4.3521 = 7.2535 < 9.4296] w=0.4969 to align # Constraint # added constraint: constraint((T0310)R39.CB, (T0310)T69.CB) [> 3.9363 = 6.5606 < 8.5287] w=0.4969 to align # Constraint # added constraint: constraint((T0310)Q128.CB, (T0310)G144.CA) [> 4.0510 = 6.7516 < 8.7771] w=0.4969 to align # Constraint # added constraint: constraint((T0310)C247.CB, (T0310)T327.CB) [> 4.6626 = 7.7711 < 10.1024] w=0.4969 to align # Constraint # added constraint: constraint((T0310)S228.CB, (T0310)N353.CB) [> 4.3911 = 7.3185 < 9.5141] w=0.4969 to align # Constraint # added constraint: constraint((T0310)K146.CB, (T0310)N176.CB) [> 4.2613 = 7.1022 < 9.2329] w=0.4969 to align # Constraint # added constraint: constraint((T0310)A338.CB, (T0310)N353.CB) [> 4.6595 = 7.7659 < 10.0956] w=0.4969 to align # Constraint # added constraint: constraint((T0310)E226.CB, (T0310)T337.CB) [> 4.6249 = 7.7081 < 10.0206] w=0.4969 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)A315.CB) [> 4.6051 = 7.6751 < 9.9777] w=0.4969 to align # Constraint # added constraint: constraint((T0310)L103.CB, (T0310)R396.CB) [> 4.1214 = 6.8691 < 8.9298] w=0.4969 to align # Constraint # added constraint: constraint((T0310)L103.CB, (T0310)L395.CB) [> 3.6653 = 6.1089 < 7.9416] w=0.4969 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)G367.CA) [> 3.9676 = 6.6127 < 8.5964] w=0.4969 to align # Constraint # added constraint: constraint((T0310)P111.CB, (T0310)T390.CB) [> 4.4454 = 7.4091 < 9.6318] w=0.4783 to align # Constraint # added constraint: constraint((T0310)A348.CB, (T0310)G365.CA) [> 3.1071 = 5.1785 < 6.7321] w=0.4762 to align # Constraint # added constraint: constraint((T0310)H214.CB, (T0310)L366.CB) [> 4.2943 = 7.1571 < 9.3042] w=0.4762 to align # Constraint # added constraint: constraint((T0310)A249.CB, (T0310)T356.CB) [> 4.4033 = 7.3388 < 9.5405] w=0.4762 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)G365.CA) [> 4.0877 = 6.8128 < 8.8567] w=0.4762 to align # Constraint # added constraint: constraint((T0310)L75.CB, (T0310)C125.CB) [> 3.0759 = 5.1265 < 6.6645] w=0.4762 to align # Constraint # added constraint: constraint((T0310)R39.CB, (T0310)A76.CB) [> 4.4348 = 7.3913 < 9.6087] w=0.4762 to align # Constraint # added constraint: constraint((T0310)F285.CB, (T0310)L302.CB) [> 3.8013 = 6.3356 < 8.2362] w=0.4762 to align # Constraint # added constraint: constraint((T0310)K143.CB, (T0310)L174.CB) [> 4.5880 = 7.6466 < 9.9406] w=0.4596 to align # Constraint # added constraint: constraint((T0310)L183.CB, (T0310)A205.CB) [> 3.4003 = 5.6671 < 7.3672] w=0.4555 to align # Constraint # added constraint: constraint((T0310)K71.CB, (T0310)C125.CB) [> 3.3452 = 5.5753 < 7.2479] w=0.4555 to align # Constraint # added constraint: constraint((T0310)S325.CB, (T0310)A368.CB) [> 3.1051 = 5.1751 < 6.7276] w=0.4555 to align # Constraint # added constraint: constraint((T0310)D124.CB, (T0310)G145.CA) [> 4.1313 = 6.8855 < 8.9511] w=0.4555 to align # Constraint # added constraint: constraint((T0310)G367.CA, (T0310)R376.CB) [> 3.4584 = 5.7640 < 7.4932] w=0.4555 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)Q128.CB) [> 4.1520 = 6.9200 < 8.9960] w=0.4555 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)I316.CB) [> 4.5667 = 7.6111 < 9.8944] w=0.4410 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)V232.CB) [> 4.3764 = 7.2940 < 9.4822] w=0.4410 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)L140.CB) [> 4.3170 = 7.1950 < 9.3535] w=0.4410 to align # Constraint # added constraint: constraint((T0310)G139.CA, (T0310)E170.CB) [> 4.5521 = 7.5869 < 9.8630] w=0.4410 to align # Constraint # added constraint: constraint((T0310)A83.CB, (T0310)A131.CB) [> 3.5749 = 5.9582 < 7.7457] w=0.4389 to align # Constraint # added constraint: constraint((T0310)R234.CB, (T0310)V331.CB) [> 4.3337 = 7.2229 < 9.3898] w=0.4369 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)M186.CB) [> 4.2932 = 7.1553 < 9.3019] w=0.4348 to align # Constraint # added constraint: constraint((T0310)A133.CB, (T0310)L189.CB) [> 4.5687 = 7.6145 < 9.8989] w=0.4348 to align # Constraint # added constraint: constraint((T0310)L142.CB, (T0310)H156.CB) [> 4.2951 = 7.1586 < 9.3061] w=0.4348 to align # Constraint # added constraint: constraint((T0310)I316.CB, (T0310)F340.CB) [> 4.2132 = 7.0220 < 9.1286] w=0.4348 to align # Constraint # added constraint: constraint((T0310)A348.CB, (T0310)A368.CB) [> 3.4467 = 5.7444 < 7.4678] w=0.4348 to align # Constraint # added constraint: constraint((T0310)C349.CB, (T0310)F358.CB) [> 3.9090 = 6.5149 < 8.4694] w=0.4348 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)S68.CB) [> 3.1251 = 5.2084 < 6.7710] w=0.4348 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)H280.CB) [> 3.2715 = 5.4525 < 7.0883] w=0.4348 to align # Constraint # added constraint: constraint((T0310)V292.CB, (T0310)C305.CB) [> 4.5408 = 7.5680 < 9.8384] w=0.4348 to align # Constraint # added constraint: constraint((T0310)N248.CB, (T0310)F358.CB) [> 4.4556 = 7.4260 < 9.6538] w=0.4348 to align # Constraint # added constraint: constraint((T0310)G217.CA, (T0310)A249.CB) [> 4.6879 = 7.8131 < 10.1571] w=0.4348 to align # Constraint # added constraint: constraint((T0310)V232.CB, (T0310)N353.CB) [> 4.6220 = 7.7033 < 10.0143] w=0.4348 to align # Constraint # added constraint: constraint((T0310)F341.CB, (T0310)W352.CB) [> 4.3689 = 7.2815 < 9.4659] w=0.4348 to align # Constraint # added constraint: constraint((T0310)L75.CB, (T0310)V129.CB) [> 3.0995 = 5.1658 < 6.7155] w=0.4348 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)V129.CB) [> 2.7357 = 4.5594 < 5.9273] w=0.4182 to align # Constraint # added constraint: constraint((T0310)V129.CB, (T0310)L155.CB) [> 3.7889 = 6.3148 < 8.2092] w=0.4161 to align # Constraint # added constraint: constraint((T0310)G361.CA, (T0310)G381.CA) [> 3.6204 = 6.0340 < 7.8442] w=0.4141 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)V172.CB) [> 4.4986 = 7.4976 < 9.7469] w=0.4141 to align # Constraint # added constraint: constraint((T0310)R24.CB, (T0310)A83.CB) [> 4.4395 = 7.3992 < 9.6189] w=0.4141 to align # Constraint # added constraint: constraint((T0310)M8.CB, (T0310)K169.CB) [> 4.3989 = 7.3316 < 9.5310] w=0.4141 to align # Constraint # added constraint: constraint((T0310)L103.CB, (T0310)G397.CA) [> 2.9573 = 4.9288 < 6.4074] w=0.4141 to align # Constraint # added constraint: constraint((T0310)C125.CB, (T0310)N152.CB) [> 4.2690 = 7.1150 < 9.2494] w=0.4141 to align # Constraint # added constraint: constraint((T0310)I202.CB, (T0310)G213.CA) [> 4.4625 = 7.4375 < 9.6688] w=0.4141 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)S355.CB) [> 4.1613 = 6.9354 < 9.0160] w=0.4141 to align # Constraint # added constraint: constraint((T0310)L272.CB, (T0310)L304.CB) [> 4.3213 = 7.2022 < 9.3629] w=0.4141 to align # Constraint # added constraint: constraint((T0310)L72.CB, (T0310)L126.CB) [> 3.4969 = 5.8282 < 7.5767] w=0.3954 to align # Constraint # added constraint: constraint((T0310)V129.CB, (T0310)I191.CB) [> 3.0925 = 5.1541 < 6.7004] w=0.3954 to align # Constraint # added constraint: constraint((T0310)T109.CB, (T0310)K392.CB) [> 4.6072 = 7.6787 < 9.9824] w=0.3954 to align # Constraint # added constraint: constraint((T0310)A348.CB, (T0310)I372.CB) [> 3.8577 = 6.4295 < 8.3584] w=0.3954 to align # Constraint # added constraint: constraint((T0310)P123.CB, (T0310)S151.CB) [> 2.9020 = 4.8367 < 6.2878] w=0.3954 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)K71.CB) [> 4.3340 = 7.2234 < 9.3904] w=0.3934 to align # Constraint # added constraint: constraint((T0310)R363.CB, (T0310)G381.CA) [> 3.6421 = 6.0701 < 7.8912] w=0.3934 to align # Constraint # added constraint: constraint((T0310)G213.CA, (T0310)L366.CB) [> 4.3651 = 7.2751 < 9.4577] w=0.3934 to align # Constraint # added constraint: constraint((T0310)N46.CB, (T0310)S68.CB) [> 2.8704 = 4.7840 < 6.2192] w=0.3934 to align # Constraint # added constraint: constraint((T0310)L250.CB, (T0310)T356.CB) [> 3.4820 = 5.8034 < 7.5444] w=0.3934 to align # Constraint # added constraint: constraint((T0310)L79.CB, (T0310)V129.CB) [> 3.3258 = 5.5430 < 7.2058] w=0.3934 to align # Constraint # added constraint: constraint((T0310)S324.CB, (T0310)S347.CB) [> 4.2377 = 7.0628 < 9.1816] w=0.3789 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)V129.CB) [> 4.0619 = 6.7699 < 8.8008] w=0.3768 to align # Constraint # added constraint: constraint((T0310)L253.CB, (T0310)I268.CB) [> 4.3299 = 7.2165 < 9.3815] w=0.3768 to align # Constraint # added constraint: constraint((T0310)V329.CB, (T0310)T356.CB) [> 3.1005 = 5.1674 < 6.7177] w=0.3747 to align # Constraint # added constraint: constraint((T0310)I82.CB, (T0310)L132.CB) [> 3.4578 = 5.7630 < 7.4919] w=0.3727 to align # Constraint # added constraint: constraint((T0310)M212.CB, (T0310)T374.CB) [> 4.0552 = 6.7587 < 8.7863] w=0.3727 to align # Constraint # added constraint: constraint((T0310)S86.CB, (T0310)L385.CB) [> 3.7844 = 6.3073 < 8.1995] w=0.3727 to align # Constraint # added constraint: constraint((T0310)H156.CB, (T0310)Q173.CB) [> 4.0044 = 6.6739 < 8.6761] w=0.3727 to align # Constraint # added constraint: constraint((T0310)C349.CB, (T0310)L366.CB) [> 3.9869 = 6.6448 < 8.6382] w=0.3727 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)F364.CB) [> 2.8015 = 4.6692 < 6.0700] w=0.3727 to align # Constraint # added constraint: constraint((T0310)I82.CB, (T0310)I134.CB) [> 4.4570 = 7.4284 < 9.6569] w=0.3727 to align # Constraint # added constraint: constraint((T0310)E120.CB, (T0310)C247.CB) [> 4.6687 = 7.7811 < 10.1155] w=0.3727 to align # Constraint # added constraint: constraint((T0310)L254.CB, (T0310)I306.CB) [> 4.6240 = 7.7067 < 10.0187] w=0.3727 to align # Constraint # added constraint: constraint((T0310)S375.CB, (T0310)G384.CA) [> 4.0641 = 6.7735 < 8.8055] w=0.3727 to align # Constraint # added constraint: constraint((T0310)L75.CB, (T0310)Q128.CB) [> 4.4602 = 7.4336 < 9.6637] w=0.3727 to align # Constraint # added constraint: constraint((T0310)V2.CB, (T0310)L141.CB) [> 4.2732 = 7.1220 < 9.2586] w=0.3727 to align # Constraint # added constraint: constraint((T0310)R237.CB, (T0310)M271.CB) [> 3.7712 = 6.2853 < 8.1709] w=0.3540 to align # Constraint # added constraint: constraint((T0310)V236.CB, (T0310)E275.CB) [> 4.2860 = 7.1433 < 9.2863] w=0.3540 to align # Constraint # added constraint: constraint((T0310)D328.CB, (T0310)T356.CB) [> 4.2625 = 7.1042 < 9.2355] w=0.3520 to align # Constraint # added constraint: constraint((T0310)T327.CB, (T0310)T356.CB) [> 2.3735 = 3.9558 < 5.1425] w=0.3520 to align # Constraint # added constraint: constraint((T0310)A130.CB, (T0310)V172.CB) [> 4.0139 = 6.6899 < 8.6968] w=0.3520 to align # Constraint # added constraint: constraint((T0310)C349.CB, (T0310)S359.CB) [> 3.9313 = 6.5522 < 8.5178] w=0.3520 to align # Constraint # added constraint: constraint((T0310)V199.CB, (T0310)G371.CA) [> 4.1439 = 6.9065 < 8.9785] w=0.3520 to align # Constraint # added constraint: constraint((T0310)G6.CA, (T0310)E170.CB) [> 4.6635 = 7.7726 < 10.1044] w=0.3520 to align # Constraint # added constraint: constraint((T0310)N102.CB, (T0310)K398.CB) [> 3.2304 = 5.3841 < 6.9993] w=0.3520 to align # Constraint # added constraint: constraint((T0310)G213.CA, (T0310)T374.CB) [> 3.3441 = 5.5735 < 7.2456] w=0.3520 to align # Constraint # added constraint: constraint((T0310)L75.CB, (T0310)D124.CB) [> 3.2245 = 5.3741 < 6.9864] w=0.3520 to align # Constraint # added constraint: constraint((T0310)A245.CB, (T0310)L302.CB) [> 4.5510 = 7.5851 < 9.8606] w=0.3520 to align # Constraint # added constraint: constraint((T0310)V236.CB, (T0310)L253.CB) [> 3.5395 = 5.8991 < 7.6689] w=0.3354 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)V236.CB) [> 3.6496 = 6.0826 < 7.9074] w=0.3354 to align # Constraint # added constraint: constraint((T0310)L94.CB, (T0310)V108.CB) [> 3.9867 = 6.6446 < 8.6380] w=0.3354 to align # Constraint # added constraint: constraint((T0310)V129.CB, (T0310)R193.CB) [> 4.4904 = 7.4840 < 9.7291] w=0.3333 to align # Constraint # added constraint: constraint((T0310)K143.CB, (T0310)E180.CB) [> 3.6701 = 6.1168 < 7.9519] w=0.3333 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)L65.CB) [> 3.5515 = 5.9193 < 7.6950] w=0.3313 to align # Constraint # added constraint: constraint((T0310)S89.CB, (T0310)L389.CB) [> 3.8966 = 6.4944 < 8.4427] w=0.3313 to align # Constraint # added constraint: constraint((T0310)K47.CB, (T0310)L65.CB) [> 3.1794 = 5.2990 < 6.8887] w=0.3313 to align # Constraint # added constraint: constraint((T0310)G365.CA, (T0310)H378.CB) [> 2.9657 = 4.9429 < 6.4257] w=0.3313 to align # Constraint # added constraint: constraint((T0310)G361.CA, (T0310)P382.CB) [> 3.8385 = 6.3975 < 8.3168] w=0.3313 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)L366.CB) [> 3.1425 = 5.2376 < 6.8088] w=0.3313 to align # Constraint # added constraint: constraint((T0310)S239.CB, (T0310)E303.CB) [> 4.5767 = 7.6277 < 9.9161] w=0.3313 to align # Constraint # added constraint: constraint((T0310)V277.CB, (T0310)A286.CB) [> 4.7270 = 7.8783 < 10.2418] w=0.3313 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)A286.CB) [> 3.7523 = 6.2538 < 8.1300] w=0.3313 to align # Constraint # added constraint: constraint((T0310)L103.CB, (T0310)K398.CB) [> 3.9148 = 6.5247 < 8.4821] w=0.3313 to align # Constraint # added constraint: constraint((T0310)T159.CB, (T0310)Q173.CB) [> 3.3324 = 5.5540 < 7.2203] w=0.3313 to align # Constraint # added constraint: constraint((T0310)S121.CB, (T0310)A245.CB) [> 3.0433 = 5.0722 < 6.5938] w=0.3313 to align # Constraint # added constraint: constraint((T0310)S89.CB, (T0310)L385.CB) [> 3.3941 = 5.6568 < 7.3538] w=0.3313 to align # Constraint # added constraint: constraint((T0310)S74.CB, (T0310)L126.CB) [> 3.2578 = 5.4297 < 7.0586] w=0.3313 to align # Constraint # added constraint: constraint((T0310)A53.CB, (T0310)S68.CB) [> 4.0265 = 6.7108 < 8.7241] w=0.3313 to align # Constraint # added constraint: constraint((T0310)C349.CB, (T0310)G367.CA) [> 4.1777 = 6.9629 < 9.0517] w=0.3126 to align # Constraint # added constraint: constraint((T0310)L79.CB, (T0310)P127.CB) [> 3.6601 = 6.1002 < 7.9302] w=0.3126 to align # Constraint # added constraint: constraint((T0310)A53.CB, (T0310)L67.CB) [> 2.7695 = 4.6158 < 6.0006] w=0.3106 to align # Constraint # added constraint: constraint((T0310)A53.CB, (T0310)L65.CB) [> 3.3434 = 5.5723 < 7.2440] w=0.3106 to align # Constraint # added constraint: constraint((T0310)E179.CB, (T0310)A205.CB) [> 3.7485 = 6.2475 < 8.1218] w=0.3106 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)L62.CB) [> 2.9398 = 4.8997 < 6.3696] w=0.3106 to align # Constraint # added constraint: constraint((T0310)I82.CB, (T0310)L385.CB) [> 3.9525 = 6.5875 < 8.5637] w=0.3106 to align # Constraint # added constraint: constraint((T0310)Q203.CB, (T0310)G213.CA) [> 4.1892 = 6.9819 < 9.0765] w=0.3106 to align # Constraint # added constraint: constraint((T0310)L34.CB, (T0310)T159.CB) [> 4.2552 = 7.0920 < 9.2196] w=0.3106 to align # Constraint # added constraint: constraint((T0310)R237.CB, (T0310)S355.CB) [> 3.6080 = 6.0133 < 7.8172] w=0.3106 to align # Constraint # added constraint: constraint((T0310)D328.CB, (T0310)L342.CB) [> 4.5395 = 7.5658 < 9.8355] w=0.3106 to align # Constraint # added constraint: constraint((T0310)L105.CB, (T0310)R396.CB) [> 4.4692 = 7.4486 < 9.6832] w=0.3106 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)S359.CB) [> 4.3960 = 7.3266 < 9.5246] w=0.3106 to align # Constraint # added constraint: constraint((T0310)S85.CB, (T0310)L385.CB) [> 3.9030 = 6.5050 < 8.4565] w=0.3106 to align # Constraint # added constraint: constraint((T0310)L141.CB, (T0310)V172.CB) [> 4.5316 = 7.5526 < 9.8184] w=0.2961 to align # Constraint # added constraint: constraint((T0310)V199.CB, (T0310)M212.CB) [> 2.6231 = 4.3718 < 5.6833] w=0.2919 to align # Constraint # added constraint: constraint((T0310)I202.CB, (T0310)M212.CB) [> 4.1298 = 6.8831 < 8.9480] w=0.2919 to align # Constraint # added constraint: constraint((T0310)Q203.CB, (T0310)M212.CB) [> 3.9696 = 6.6160 < 8.6007] w=0.2919 to align # Constraint # added constraint: constraint((T0310)L79.CB, (T0310)L132.CB) [> 3.7869 = 6.3114 < 8.2049] w=0.2919 to align # Constraint # added constraint: constraint((T0310)I218.CB, (T0310)H326.CB) [> 4.5863 = 7.6438 < 9.9370] w=0.2919 to align # Constraint # added constraint: constraint((T0310)S121.CB, (T0310)A246.CB) [> 3.8850 = 6.4750 < 8.4175] w=0.2899 to align # Constraint # added constraint: constraint((T0310)R122.CB, (T0310)L289.CB) [> 4.2348 = 7.0579 < 9.1753] w=0.2899 to align # Constraint # added constraint: constraint((T0310)A130.CB, (T0310)Q173.CB) [> 3.9494 = 6.5823 < 8.5570] w=0.2899 to align # Constraint # added constraint: constraint((T0310)S136.CB, (T0310)I377.CB) [> 2.9336 = 4.8893 < 6.3561] w=0.2899 to align # Constraint # added constraint: constraint((T0310)L140.CB, (T0310)L174.CB) [> 4.0915 = 6.8192 < 8.8650] w=0.2899 to align # Constraint # added constraint: constraint((T0310)H156.CB, (T0310)V175.CB) [> 2.7474 = 4.5790 < 5.9527] w=0.2899 to align # Constraint # added constraint: constraint((T0310)S195.CB, (T0310)H214.CB) [> 4.2814 = 7.1357 < 9.2764] w=0.2899 to align # Constraint # added constraint: constraint((T0310)S196.CB, (T0310)R363.CB) [> 3.2889 = 5.4815 < 7.1259] w=0.2899 to align # Constraint # added constraint: constraint((T0310)M212.CB, (T0310)L366.CB) [> 3.0306 = 5.0510 < 6.5662] w=0.2899 to align # Constraint # added constraint: constraint((T0310)Q160.CB, (T0310)V172.CB) [> 4.3258 = 7.2096 < 9.3725] w=0.2899 to align # Constraint # added constraint: constraint((T0310)F364.CB, (T0310)H378.CB) [> 3.7256 = 6.2093 < 8.0720] w=0.2899 to align # Constraint # added constraint: constraint((T0310)Q5.CB, (T0310)N176.CB) [> 3.5486 = 5.9144 < 7.6887] w=0.2899 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)L174.CB) [> 3.4892 = 5.8154 < 7.5600] w=0.2899 to align # Constraint # added constraint: constraint((T0310)G12.CA, (T0310)V172.CB) [> 3.6585 = 6.0975 < 7.9268] w=0.2899 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)E52.CB) [> 3.8587 = 6.4312 < 8.3606] w=0.2899 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)L67.CB) [> 3.0145 = 5.0241 < 6.5313] w=0.2899 to align # Constraint # added constraint: constraint((T0310)S359.CB, (T0310)A368.CB) [> 2.7449 = 4.5748 < 5.9472] w=0.2899 to align # Constraint # added constraint: constraint((T0310)R363.CB, (T0310)V383.CB) [> 3.0015 = 5.0024 < 6.5032] w=0.2899 to align # Constraint # added constraint: constraint((T0310)G365.CA, (T0310)I377.CB) [> 3.6883 = 6.1472 < 7.9914] w=0.2899 to align # Constraint # added constraint: constraint((T0310)G365.CA, (T0310)V383.CB) [> 3.4231 = 5.7052 < 7.4167] w=0.2899 to align # Constraint # added constraint: constraint((T0310)L366.CB, (T0310)H378.CB) [> 3.2662 = 5.4437 < 7.0768] w=0.2899 to align # Constraint # added constraint: constraint((T0310)G367.CA, (T0310)I377.CB) [> 3.6049 = 6.0082 < 7.8106] w=0.2899 to align # Constraint # added constraint: constraint((T0310)A148.CB, (T0310)L289.CB) [> 4.4249 = 7.3749 < 9.5873] w=0.2899 to align # Constraint # added constraint: constraint((T0310)G213.CA, (T0310)F364.CB) [> 4.0046 = 6.6744 < 8.6767] w=0.2899 to align # Constraint # added constraint: constraint((T0310)H214.CB, (T0310)G367.CA) [> 3.7301 = 6.2169 < 8.0819] w=0.2899 to align # Constraint # added constraint: constraint((T0310)G144.CA, (T0310)T177.CB) [> 4.1665 = 6.9442 < 9.0275] w=0.2733 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)L132.CB) [> 3.8853 = 6.4755 < 8.4181] w=0.2712 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)S347.CB) [> 4.6804 = 7.8006 < 10.1408] w=0.2712 to align # Constraint # added constraint: constraint((T0310)S347.CB, (T0310)I372.CB) [> 4.5709 = 7.6182 < 9.9036] w=0.2692 to align # Constraint # added constraint: constraint((T0310)S347.CB, (T0310)V370.CB) [> 4.5341 = 7.5568 < 9.8239] w=0.2692 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)L61.CB) [> 3.2635 = 5.4391 < 7.0709] w=0.2692 to align # Constraint # added constraint: constraint((T0310)R363.CB, (T0310)P382.CB) [> 4.1743 = 6.9571 < 9.0443] w=0.2692 to align # Constraint # added constraint: constraint((T0310)A348.CB, (T0310)G361.CA) [> 3.4046 = 5.6743 < 7.3766] w=0.2484 to align # Constraint # added constraint: constraint((T0310)S347.CB, (T0310)E369.CB) [> 3.7353 = 6.2256 < 8.0932] w=0.2484 to align # Constraint # added constraint: constraint((T0310)S347.CB, (T0310)G367.CA) [> 4.2614 = 7.1023 < 9.2330] w=0.2484 to align # Constraint # added constraint: constraint((T0310)S347.CB, (T0310)G361.CA) [> 4.2614 = 7.1023 < 9.2330] w=0.2484 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)A368.CB) [> 2.7756 = 4.6260 < 6.0138] w=0.2484 to align # Constraint # added constraint: constraint((T0310)G365.CA, (T0310)T374.CB) [> 3.3476 = 5.5794 < 7.2532] w=0.2484 to align # Constraint # added constraint: constraint((T0310)I42.CB, (T0310)S68.CB) [> 4.5521 = 7.5868 < 9.8629] w=0.2484 to align # Constraint # added constraint: constraint((T0310)V211.CB, (T0310)L366.CB) [> 4.0089 = 6.6814 < 8.6859] w=0.2484 to align # Constraint # added constraint: constraint((T0310)V211.CB, (T0310)I372.CB) [> 3.9743 = 6.6238 < 8.6109] w=0.2484 to align # Constraint # added constraint: constraint((T0310)V211.CB, (T0310)T374.CB) [> 4.0509 = 6.7514 < 8.7769] w=0.2484 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)V236.CB) [> 4.3053 = 7.1755 < 9.3282] w=0.2484 to align # Constraint # added constraint: constraint((T0310)P192.CB, (T0310)Q203.CB) [> 4.5799 = 7.6332 < 9.9231] w=0.2484 to align # Constraint # added constraint: constraint((T0310)I27.CB, (T0310)H166.CB) [> 2.9235 = 4.8726 < 6.3343] w=0.2484 to align # Constraint # added constraint: constraint((T0310)Q38.CB, (T0310)L157.CB) [> 4.4672 = 7.4454 < 9.6790] w=0.2484 to align # Constraint # added constraint: constraint((T0310)S85.CB, (T0310)P382.CB) [> 3.7618 = 6.2697 < 8.1507] w=0.2484 to align # Constraint # added constraint: constraint((T0310)L183.CB, (T0310)A206.CB) [> 3.9715 = 6.6191 < 8.6048] w=0.2484 to align # Constraint # added constraint: constraint((T0310)R193.CB, (T0310)M212.CB) [> 4.4962 = 7.4937 < 9.7418] w=0.2484 to align # Constraint # added constraint: constraint((T0310)Y288.CB, (T0310)I306.CB) [> 3.8773 = 6.4621 < 8.4007] w=0.2484 to align # Constraint # added constraint: constraint((T0310)Y288.CB, (T0310)E307.CB) [> 3.1923 = 5.3205 < 6.9167] w=0.2484 to align # Constraint # added constraint: constraint((T0310)T290.CB, (T0310)E307.CB) [> 4.1879 = 6.9798 < 9.0737] w=0.2484 to align # Constraint # added constraint: constraint((T0310)V329.CB, (T0310)N353.CB) [> 4.7578 = 7.9297 < 10.3086] w=0.2484 to align # Constraint # added constraint: constraint((T0310)A354.CB, (T0310)G371.CA) [> 3.6700 = 6.1166 < 7.9516] w=0.2484 to align # Constraint # added constraint: constraint((T0310)R357.CB, (T0310)E369.CB) [> 3.7729 = 6.2882 < 8.1747] w=0.2484 to align # Constraint # added constraint: constraint((T0310)R357.CB, (T0310)I372.CB) [> 2.7847 = 4.6411 < 6.0334] w=0.2484 to align # Constraint # added constraint: constraint((T0310)F358.CB, (T0310)E369.CB) [> 3.0773 = 5.1288 < 6.6674] w=0.2484 to align # Constraint # added constraint: constraint((T0310)F358.CB, (T0310)V370.CB) [> 3.4838 = 5.8064 < 7.5483] w=0.2484 to align # Constraint # added constraint: constraint((T0310)S359.CB, (T0310)E369.CB) [> 3.4673 = 5.7788 < 7.5124] w=0.2484 to align # Constraint # added constraint: constraint((T0310)L366.CB, (T0310)I377.CB) [> 2.9158 = 4.8597 < 6.3175] w=0.2484 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)G113.CA) [> 4.7706 = 7.9510 < 10.3363] w=0.2484 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)G194.CA) [> 4.4525 = 7.4208 < 9.6471] w=0.2484 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)V309.CB) [> 4.6287 = 7.7145 < 10.0289] w=0.2484 to align # Constraint # added constraint: constraint((T0310)V223.CB, (T0310)I330.CB) [> 4.5670 = 7.6116 < 9.8951] w=0.2484 to align # Constraint # added constraint: constraint((T0310)G78.CA, (T0310)P127.CB) [> 3.8493 = 6.4155 < 8.3401] w=0.2484 to align # Constraint # added constraint: constraint((T0310)G78.CA, (T0310)A130.CB) [> 4.0871 = 6.8119 < 8.8554] w=0.2484 to align # Constraint # added constraint: constraint((T0310)Q81.CB, (T0310)G371.CA) [> 4.1420 = 6.9033 < 8.9742] w=0.2484 to align # Constraint # added constraint: constraint((T0310)I112.CB, (T0310)I377.CB) [> 3.9148 = 6.5246 < 8.4820] w=0.2484 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)P192.CB) [> 4.6866 = 7.8110 < 10.1543] w=0.2484 to align # Constraint # added constraint: constraint((T0310)P127.CB, (T0310)L155.CB) [> 3.9179 = 6.5298 < 8.4887] w=0.2484 to align # Constraint # added constraint: constraint((T0310)N138.CB, (T0310)I377.CB) [> 3.6560 = 6.0933 < 7.9213] w=0.2484 to align # Constraint # added constraint: constraint((T0310)V199.CB, (T0310)G365.CA) [> 3.9490 = 6.5817 < 8.5562] w=0.2484 to align # Constraint # added constraint: constraint((T0310)G213.CA, (T0310)G367.CA) [> 4.5371 = 7.5618 < 9.8303] w=0.2484 to align # Constraint # added constraint: constraint((T0310)Y288.CB, (T0310)C305.CB) [> 2.6994 = 4.4990 < 5.8487] w=0.2484 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)A131.CB) [> 4.1101 = 6.8501 < 8.9052] w=0.2484 to align # Constraint # added constraint: constraint((T0310)E106.CB, (T0310)L395.CB) [> 4.6998 = 7.8330 < 10.1829] w=0.2277 to align # Constraint # added constraint: constraint((T0310)T159.CB, (T0310)A171.CB) [> 4.2729 = 7.1214 < 9.2579] w=0.2277 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)L61.CB) [> 3.6028 = 6.0047 < 7.8061] w=0.2277 to align # Constraint # added constraint: constraint((T0310)L65.CB, (T0310)G282.CA) [> 3.8343 = 6.3904 < 8.3076] w=0.2277 to align # Constraint # added constraint: constraint((T0310)I77.CB, (T0310)A354.CB) [> 3.6539 = 6.0898 < 7.9168] w=0.2277 to align # Constraint # added constraint: constraint((T0310)Q81.CB, (T0310)A354.CB) [> 2.8677 = 4.7795 < 6.2133] w=0.2277 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)I377.CB) [> 4.1013 = 6.8356 < 8.8862] w=0.2277 to align # Constraint # added constraint: constraint((T0310)P123.CB, (T0310)G145.CA) [> 4.2365 = 7.0609 < 9.1791] w=0.2277 to align # Constraint # added constraint: constraint((T0310)L132.CB, (T0310)G381.CA) [> 4.0153 = 6.6921 < 8.6998] w=0.2277 to align # Constraint # added constraint: constraint((T0310)Q5.CB, (T0310)E170.CB) [> 4.5261 = 7.5434 < 9.8065] w=0.2277 to align # Constraint # added constraint: constraint((T0310)A249.CB, (T0310)R357.CB) [> 4.1281 = 6.8802 < 8.9443] w=0.2277 to align # Constraint # added constraint: constraint((T0310)G213.CA, (T0310)H326.CB) [> 4.6429 = 7.7381 < 10.0595] w=0.2277 to align # Constraint # added constraint: constraint((T0310)D346.CB, (T0310)A368.CB) [> 4.1852 = 6.9752 < 9.0678] w=0.2277 to align # Constraint # added constraint: constraint((T0310)V110.CB, (T0310)G381.CA) [> 3.8709 = 6.4515 < 8.3869] w=0.2277 to align # Constraint # added constraint: constraint((T0310)V199.CB, (T0310)S373.CB) [> 4.1692 = 6.9486 < 9.0332] w=0.2277 to align # Constraint # added constraint: constraint((T0310)H280.CB, (T0310)D301.CB) [> 3.6926 = 6.1544 < 8.0007] w=0.2277 to align # Constraint # added constraint: constraint((T0310)H280.CB, (T0310)L302.CB) [> 3.5136 = 5.8560 < 7.6128] w=0.2277 to align # Constraint # added constraint: constraint((T0310)P283.CB, (T0310)E303.CB) [> 2.4891 = 4.1485 < 5.3930] w=0.2277 to align # Constraint # added constraint: constraint((T0310)K284.CB, (T0310)L304.CB) [> 3.0457 = 5.0762 < 6.5991] w=0.2277 to align # Constraint # added constraint: constraint((T0310)F285.CB, (T0310)S294.CB) [> 3.8011 = 6.3351 < 8.2356] w=0.2277 to align # Constraint # added constraint: constraint((T0310)F285.CB, (T0310)E303.CB) [> 4.0067 = 6.6778 < 8.6812] w=0.2277 to align # Constraint # added constraint: constraint((T0310)F285.CB, (T0310)L304.CB) [> 4.0321 = 6.7201 < 8.7362] w=0.2277 to align # Constraint # added constraint: constraint((T0310)A286.CB, (T0310)I306.CB) [> 2.9114 = 4.8524 < 6.3081] w=0.2277 to align # Constraint # added constraint: constraint((T0310)S74.CB, (T0310)D360.CB) [> 4.5470 = 7.5783 < 9.8518] w=0.2070 to align # Constraint # added constraint: constraint((T0310)P210.CB, (T0310)R376.CB) [> 4.2446 = 7.0744 < 9.1967] w=0.2070 to align # Constraint # added constraint: constraint((T0310)L289.CB, (T0310)E307.CB) [> 4.4660 = 7.4433 < 9.6763] w=0.2070 to align # Constraint # added constraint: constraint((T0310)G78.CA, (T0310)A354.CB) [> 3.1344 = 5.2240 < 6.7912] w=0.2070 to align # Constraint # added constraint: constraint((T0310)P123.CB, (T0310)G144.CA) [> 4.2065 = 7.0108 < 9.1140] w=0.2070 to align # Constraint # added constraint: constraint((T0310)M212.CB, (T0310)G367.CA) [> 4.2984 = 7.1640 < 9.3132] w=0.2070 to align # Constraint # added constraint: constraint((T0310)I27.CB, (T0310)L163.CB) [> 4.0112 = 6.6854 < 8.6910] w=0.2070 to align # Constraint # added constraint: constraint((T0310)L155.CB, (T0310)L174.CB) [> 4.3032 = 7.1720 < 9.3236] w=0.2070 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)A76.CB) [> 3.9358 = 6.5597 < 8.5276] w=0.2070 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)A162.CB) [> 4.4797 = 7.4662 < 9.7061] w=0.2070 to align # Constraint # added constraint: constraint((T0310)R363.CB, (T0310)G384.CA) [> 3.7960 = 6.3267 < 8.2247] w=0.2070 to align # Constraint # added constraint: constraint((T0310)T374.CB, (T0310)V383.CB) [> 2.6597 = 4.4329 < 5.7627] w=0.2070 to align # Constraint # added constraint: constraint((T0310)T374.CB, (T0310)G384.CA) [> 3.4890 = 5.8151 < 7.5596] w=0.2070 to align # Constraint # added constraint: constraint((T0310)G145.CA, (T0310)N176.CB) [> 4.6484 = 7.7473 < 10.0715] w=0.2070 to align # Constraint # added constraint: constraint((T0310)S287.CB, (T0310)I306.CB) [> 4.5118 = 7.5196 < 9.7755] w=0.2070 to align # Constraint # added constraint: constraint((T0310)C241.CB, (T0310)L302.CB) [> 3.8978 = 6.4963 < 8.4451] w=0.2070 to align # Constraint # added constraint: constraint((T0310)M271.CB, (T0310)L304.CB) [> 4.3080 = 7.1799 < 9.3339] w=0.2070 to align # Constraint # added constraint: constraint((T0310)D346.CB, (T0310)G361.CA) [> 4.1239 = 6.8731 < 8.9351] w=0.2070 to align # Constraint # added constraint: constraint((T0310)D346.CB, (T0310)G367.CA) [> 4.1239 = 6.8731 < 8.9351] w=0.2070 to align # Constraint # added constraint: constraint((T0310)D346.CB, (T0310)E369.CB) [> 3.2327 = 5.3878 < 7.0041] w=0.2070 to align # Constraint # added constraint: constraint((T0310)A354.CB, (T0310)V370.CB) [> 2.9649 = 4.9415 < 6.4240] w=0.2070 to align # Constraint # added constraint: constraint((T0310)S355.CB, (T0310)G371.CA) [> 3.6506 = 6.0843 < 7.9096] w=0.2070 to align # Constraint # added constraint: constraint((T0310)F358.CB, (T0310)A368.CB) [> 3.8455 = 6.4092 < 8.3319] w=0.2070 to align # Constraint # added constraint: constraint((T0310)E335.CB, (T0310)W352.CB) [> 3.5307 = 5.8845 < 7.6499] w=0.1925 to align # Constraint # added constraint: constraint((T0310)V232.CB, (T0310)I268.CB) [> 3.7974 = 6.3290 < 8.2277] w=0.1905 to align # Constraint # added constraint: constraint((T0310)L62.CB, (T0310)L72.CB) [> 3.4681 = 5.7801 < 7.5142] w=0.1884 to align # Constraint # added constraint: constraint((T0310)V108.CB, (T0310)W393.CB) [> 4.6800 = 7.8001 < 10.1401] w=0.1863 to align # Constraint # added constraint: constraint((T0310)C349.CB, (T0310)Y362.CB) [> 4.4570 = 7.4283 < 9.6568] w=0.1863 to align # Constraint # added constraint: constraint((T0310)A249.CB, (T0310)T327.CB) [> 4.5305 = 7.5508 < 9.8160] w=0.1863 to align # Constraint # added constraint: constraint((T0310)V236.CB, (T0310)L304.CB) [> 4.2070 = 7.0117 < 9.1152] w=0.1863 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)P123.CB) [> 4.6208 = 7.7014 < 10.0118] w=0.1863 to align # Constraint # added constraint: constraint((T0310)Q23.CB, (T0310)H166.CB) [> 4.0963 = 6.8272 < 8.8754] w=0.1863 to align # Constraint # added constraint: constraint((T0310)L163.CB, (T0310)V172.CB) [> 3.8340 = 6.3899 < 8.3069] w=0.1863 to align # Constraint # added constraint: constraint((T0310)D224.CB, (T0310)A338.CB) [> 4.6541 = 7.7568 < 10.0838] w=0.1863 to align # Constraint # added constraint: constraint((T0310)V211.CB, (T0310)S373.CB) [> 4.2559 = 7.0932 < 9.2211] w=0.1863 to align # Constraint # added constraint: constraint((T0310)E104.CB, (T0310)L385.CB) [> 3.2276 = 5.3793 < 6.9931] w=0.1863 to align # Constraint # added constraint: constraint((T0310)L105.CB, (T0310)V383.CB) [> 4.1956 = 6.9927 < 9.0905] w=0.1863 to align # Constraint # added constraint: constraint((T0310)E106.CB, (T0310)G384.CA) [> 4.2406 = 7.0676 < 9.1880] w=0.1863 to align # Constraint # added constraint: constraint((T0310)V108.CB, (T0310)V383.CB) [> 4.1545 = 6.9242 < 9.0015] w=0.1863 to align # Constraint # added constraint: constraint((T0310)V110.CB, (T0310)R380.CB) [> 4.4437 = 7.4062 < 9.6281] w=0.1863 to align # Constraint # added constraint: constraint((T0310)S287.CB, (T0310)V308.CB) [> 4.2312 = 7.0521 < 9.1677] w=0.1863 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)E369.CB) [> 4.4474 = 7.4123 < 9.6360] w=0.1863 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)L65.CB) [> 4.5639 = 7.6065 < 9.8885] w=0.1863 to align # Constraint # added constraint: constraint((T0310)L103.CB, (T0310)G384.CA) [> 3.7275 = 6.2125 < 8.0762] w=0.1863 to align # Constraint # added constraint: constraint((T0310)E333.CB, (T0310)N353.CB) [> 4.7477 = 7.9128 < 10.2867] w=0.1698 to align # Constraint # added constraint: constraint((T0310)I190.CB, (T0310)G213.CA) [> 4.6769 = 7.7948 < 10.1333] w=0.1677 to align # Constraint # added constraint: constraint((T0310)R237.CB, (T0310)L272.CB) [> 4.0657 = 6.7762 < 8.8090] w=0.1677 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)N73.CB) [> 3.2472 = 5.4119 < 7.0355] w=0.1656 to align # Constraint # added constraint: constraint((T0310)A53.CB, (T0310)C241.CB) [> 4.5790 = 7.6317 < 9.9212] w=0.1656 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)G167.CA) [> 4.6095 = 7.6825 < 9.9873] w=0.1656 to align # Constraint # added constraint: constraint((T0310)S373.CB, (T0310)G384.CA) [> 4.5639 = 7.6066 < 9.8885] w=0.1656 to align # Constraint # added constraint: constraint((T0310)N102.CB, (T0310)E386.CB) [> 3.8891 = 6.4819 < 8.4265] w=0.1656 to align # Constraint # added constraint: constraint((T0310)Y288.CB, (T0310)L302.CB) [> 4.6910 = 7.8183 < 10.1638] w=0.1656 to align # Constraint # added constraint: constraint((T0310)L126.CB, (T0310)R193.CB) [> 3.2457 = 5.4095 < 7.0324] w=0.1656 to align # Constraint # added constraint: constraint((T0310)G213.CA, (T0310)E369.CB) [> 4.5581 = 7.5969 < 9.8760] w=0.1656 to align # Constraint # added constraint: constraint((T0310)R122.CB, (T0310)A148.CB) [> 4.4751 = 7.4585 < 9.6960] w=0.1656 to align # Constraint # added constraint: constraint((T0310)K231.CB, (T0310)A354.CB) [> 4.4739 = 7.4564 < 9.6934] w=0.1470 to align # Constraint # added constraint: constraint((T0310)L61.CB, (T0310)L72.CB) [> 4.0714 = 6.7856 < 8.8212] w=0.1470 to align # Constraint # added constraint: constraint((T0310)A348.CB, (T0310)R363.CB) [> 4.0767 = 6.7946 < 8.8330] w=0.1449 to align # Constraint # added constraint: constraint((T0310)F364.CB, (T0310)P382.CB) [> 3.7615 = 6.2691 < 8.1499] w=0.1449 to align # Constraint # added constraint: constraint((T0310)F364.CB, (T0310)V383.CB) [> 3.9452 = 6.5754 < 8.5480] w=0.1449 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)E161.CB) [> 4.5871 = 7.6451 < 9.9386] w=0.1449 to align # Constraint # added constraint: constraint((T0310)E275.CB, (T0310)L302.CB) [> 4.0381 = 6.7301 < 8.7492] w=0.1449 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)A76.CB) [> 3.3268 = 5.5446 < 7.2080] w=0.1449 to align # Constraint # added constraint: constraint((T0310)K185.CB, (T0310)A206.CB) [> 4.0786 = 6.7976 < 8.8369] w=0.1449 to align # Constraint # added constraint: constraint((T0310)S89.CB, (T0310)P382.CB) [> 3.9773 = 6.6289 < 8.6175] w=0.1449 to align # Constraint # added constraint: constraint((T0310)T252.CB, (T0310)Y288.CB) [> 4.5931 = 7.6551 < 9.9517] w=0.1449 to align # Constraint # added constraint: constraint((T0310)G78.CA, (T0310)V370.CB) [> 4.1127 = 6.8545 < 8.9108] w=0.1449 to align # Constraint # added constraint: constraint((T0310)G213.CA, (T0310)A368.CB) [> 4.2228 = 7.0380 < 9.1494] w=0.1449 to align # Constraint # added constraint: constraint((T0310)G365.CA, (T0310)G384.CA) [> 4.1216 = 6.8694 < 8.9302] w=0.1449 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)P192.CB) [> 3.9746 = 6.6243 < 8.6116] w=0.1304 to align # Constraint # added constraint: constraint((T0310)E120.CB, (T0310)S195.CB) [> 4.4297 = 7.3829 < 9.5977] w=0.1304 to align # Constraint # added constraint: constraint((T0310)I255.CB, (T0310)A315.CB) [> 4.5140 = 7.5233 < 9.7803] w=0.1304 to align # Constraint # added constraint: constraint((T0310)L235.CB, (T0310)F351.CB) [> 4.5323 = 7.5539 < 9.8200] w=0.1284 to align # Constraint # added constraint: constraint((T0310)R200.CB, (T0310)S215.CB) [> 4.1869 = 6.9782 < 9.0717] w=0.1284 to align # Constraint # added constraint: constraint((T0310)A76.CB, (T0310)P127.CB) [> 4.1058 = 6.8430 < 8.8959] w=0.1284 to align # Constraint # added constraint: constraint((T0310)F265.CB, (T0310)V308.CB) [> 4.1657 = 6.9429 < 9.0258] w=0.1284 to align # Constraint # added constraint: constraint((T0310)P123.CB, (T0310)H150.CB) [> 4.3665 = 7.2775 < 9.4607] w=0.1263 to align # Constraint # added constraint: constraint((T0310)R96.CB, (T0310)L395.CB) [> 4.2634 = 7.1057 < 9.2374] w=0.1242 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)L62.CB) [> 3.4387 = 5.7311 < 7.4505] w=0.1242 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)Y243.CB) [> 4.0999 = 6.8331 < 8.8830] w=0.1242 to align # Constraint # added constraint: constraint((T0310)A315.CB, (T0310)T337.CB) [> 4.7760 = 7.9599 < 10.3479] w=0.1242 to align # Constraint # added constraint: constraint((T0310)E120.CB, (T0310)H214.CB) [> 4.5946 = 7.6577 < 9.9550] w=0.1242 to align # Constraint # added constraint: constraint((T0310)E179.CB, (T0310)I202.CB) [> 4.4870 = 7.4784 < 9.7219] w=0.1242 to align # Constraint # added constraint: constraint((T0310)F364.CB, (T0310)R380.CB) [> 3.1890 = 5.3151 < 6.9096] w=0.1242 to align # Constraint # added constraint: constraint((T0310)F358.CB, (T0310)G371.CA) [> 3.9407 = 6.5679 < 8.5382] w=0.1242 to align # Constraint # added constraint: constraint((T0310)P21.CB, (T0310)A83.CB) [> 3.5668 = 5.9447 < 7.7281] w=0.1242 to align # Constraint # added constraint: constraint((T0310)E41.CB, (T0310)L158.CB) [> 4.4924 = 7.4874 < 9.7336] w=0.1242 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)L198.CB) [> 4.4181 = 7.3635 < 9.5725] w=0.1242 to align # Constraint # added constraint: constraint((T0310)L140.CB, (T0310)I191.CB) [> 4.7406 = 7.9010 < 10.2713] w=0.1242 to align # Constraint # added constraint: constraint((T0310)V229.CB, (T0310)V331.CB) [> 4.7508 = 7.9180 < 10.2934] w=0.1242 to align # Constraint # added constraint: constraint((T0310)E251.CB, (T0310)L295.CB) [> 4.7679 = 7.9464 < 10.3304] w=0.1242 to align # Constraint # added constraint: constraint((T0310)A315.CB, (T0310)I330.CB) [> 4.5871 = 7.6452 < 9.9388] w=0.1242 to align # Constraint # added constraint: constraint((T0310)I191.CB, (T0310)S373.CB) [> 4.6155 = 7.6925 < 10.0003] w=0.1242 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)I134.CB) [> 4.5335 = 7.5559 < 9.8226] w=0.1242 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)L155.CB) [> 4.7477 = 7.9128 < 10.2866] w=0.1242 to align # Constraint # added constraint: constraint((T0310)S225.CB, (T0310)L260.CB) [> 2.9148 = 4.8579 < 6.3153] w=0.1056 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)F358.CB) [> 3.9585 = 6.5974 < 8.5766] w=0.1056 to align # Constraint # added constraint: constraint((T0310)C349.CB, (T0310)A368.CB) [> 4.5044 = 7.5073 < 9.7594] w=0.1056 to align # Constraint # added constraint: constraint((T0310)I118.CB, (T0310)E180.CB) [> 4.0230 = 6.7050 < 8.7166] w=0.1056 to align # Constraint # added constraint: constraint((T0310)Q160.CB, (T0310)A171.CB) [> 4.6089 = 7.6815 < 9.9860] w=0.1035 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)R122.CB) [> 4.6942 = 7.8236 < 10.1707] w=0.1035 to align # Constraint # added constraint: constraint((T0310)L94.CB, (T0310)T391.CB) [> 3.8328 = 6.3880 < 8.3044] w=0.1035 to align # Constraint # added constraint: constraint((T0310)I99.CB, (T0310)L395.CB) [> 4.2388 = 7.0647 < 9.1841] w=0.1035 to align # Constraint # added constraint: constraint((T0310)Y362.CB, (T0310)V383.CB) [> 4.4679 = 7.4465 < 9.6804] w=0.1035 to align # Constraint # added constraint: constraint((T0310)G78.CA, (T0310)L126.CB) [> 4.4209 = 7.3682 < 9.5786] w=0.1035 to align # Constraint # added constraint: constraint((T0310)A286.CB, (T0310)C305.CB) [> 4.6600 = 7.7667 < 10.0968] w=0.1035 to align # Constraint # added constraint: constraint((T0310)A286.CB, (T0310)V308.CB) [> 4.6100 = 7.6834 < 9.9884] w=0.1035 to align # Constraint # added constraint: constraint((T0310)M15.CB, (T0310)A171.CB) [> 3.6216 = 6.0360 < 7.8468] w=0.1035 to align # Constraint # added constraint: constraint((T0310)L140.CB, (T0310)E170.CB) [> 3.1700 = 5.2834 < 6.8684] w=0.0890 to align # Constraint # added constraint: constraint((T0310)L142.CB, (T0310)A171.CB) [> 4.2387 = 7.0645 < 9.1839] w=0.0890 to align # Constraint # added constraint: constraint((T0310)K143.CB, (T0310)A171.CB) [> 4.3530 = 7.2551 < 9.4316] w=0.0890 to align # Constraint # added constraint: constraint((T0310)P123.CB, (T0310)A149.CB) [> 4.5636 = 7.6060 < 9.8878] w=0.0849 to align # Constraint # added constraint: constraint((T0310)V90.CB, (T0310)L385.CB) [> 3.5985 = 5.9975 < 7.7967] w=0.0849 to align # Constraint # added constraint: constraint((T0310)V370.CB, (T0310)V383.CB) [> 2.5515 = 4.2524 < 5.5282] w=0.0849 to align # Constraint # added constraint: constraint((T0310)L366.CB, (T0310)R380.CB) [> 2.9145 = 4.8574 < 6.3147] w=0.0828 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)C241.CB) [> 4.4941 = 7.4901 < 9.7372] w=0.0828 to align # Constraint # added constraint: constraint((T0310)V277.CB, (T0310)L302.CB) [> 3.0725 = 5.1209 < 6.6571] w=0.0828 to align # Constraint # added constraint: constraint((T0310)Q276.CB, (T0310)A286.CB) [> 4.1807 = 6.9679 < 9.0582] w=0.0828 to align # Constraint # added constraint: constraint((T0310)G113.CA, (T0310)L388.CB) [> 4.5539 = 7.5899 < 9.8669] w=0.0828 to align # Constraint # added constraint: constraint((T0310)V93.CB, (T0310)L414.CB) [> 3.2336 = 5.3893 < 7.0061] w=0.0828 to align # Constraint # added constraint: constraint((T0310)V93.CB, (T0310)Y413.CB) [> 3.6316 = 6.0527 < 7.8685] w=0.0828 to align # Constraint # added constraint: constraint((T0310)V211.CB, (T0310)G367.CA) [> 4.6712 = 7.7853 < 10.1209] w=0.0828 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)L183.CB) [> 4.5191 = 7.5318 < 9.7913] w=0.0828 to align # Constraint # added constraint: constraint((T0310)A100.CB, (T0310)L395.CB) [> 4.3570 = 7.2616 < 9.4401] w=0.0828 to align # Constraint # added constraint: constraint((T0310)I82.CB, (T0310)A354.CB) [> 4.5396 = 7.5660 < 9.8358] w=0.0828 to align # Constraint # added constraint: constraint((T0310)P210.CB, (T0310)L388.CB) [> 4.6055 = 7.6758 < 9.9785] w=0.0828 to align # Constraint # added constraint: constraint((T0310)I190.CB, (T0310)A205.CB) [> 4.7642 = 7.9403 < 10.3224] w=0.0828 to align # Constraint # added constraint: constraint((T0310)E52.CB, (T0310)R64.CB) [> 2.8621 = 4.7702 < 6.2012] w=0.0828 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)R64.CB) [> 2.5121 = 4.1869 < 5.4430] w=0.0828 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)L163.CB) [> 4.5591 = 7.5984 < 9.8780] w=0.0828 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)P127.CB) [> 4.3392 = 7.2320 < 9.4015] w=0.0828 to align # Constraint # added constraint: constraint((T0310)H30.CB, (T0310)L163.CB) [> 4.2181 = 7.0302 < 9.1393] w=0.0828 to align # Constraint # added constraint: constraint((T0310)L19.CB, (T0310)K169.CB) [> 4.3600 = 7.2667 < 9.4467] w=0.0828 to align # Constraint # added constraint: constraint((T0310)E7.CB, (T0310)E170.CB) [> 4.6810 = 7.8017 < 10.1422] w=0.0828 to align # Constraint # added constraint: constraint((T0310)M212.CB, (T0310)V383.CB) [> 3.6045 = 6.0075 < 7.8098] w=0.0828 to align # Constraint # added constraint: constraint((T0310)V312.CB, (T0310)D334.CB) [> 4.7927 = 7.9879 < 10.3842] w=0.0683 to align # Constraint # added constraint: constraint((T0310)E120.CB, (T0310)K143.CB) [> 4.3864 = 7.3108 < 9.5040] w=0.0683 to align # Constraint # added constraint: constraint((T0310)E120.CB, (T0310)G144.CA) [> 4.7471 = 7.9118 < 10.2854] w=0.0683 to align # Constraint # added constraint: constraint((T0310)L140.CB, (T0310)I187.CB) [> 4.1469 = 6.9116 < 8.9850] w=0.0683 to align # Constraint # added constraint: constraint((T0310)G145.CA, (T0310)L174.CB) [> 4.6917 = 7.8194 < 10.1653] w=0.0683 to align # Constraint # added constraint: constraint((T0310)F119.CB, (T0310)L141.CB) [> 3.7552 = 6.2586 < 8.1362] w=0.0683 to align # Constraint # added constraint: constraint((T0310)V117.CB, (T0310)G139.CA) [> 4.2130 = 7.0216 < 9.1281] w=0.0683 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)G139.CA) [> 4.3059 = 7.1765 < 9.3294] w=0.0683 to align # Constraint # added constraint: constraint((T0310)A17.CB, (T0310)D314.CB) [> 4.7814 = 7.9691 < 10.3598] w=0.0683 to align # Constraint # added constraint: constraint((T0310)A17.CB, (T0310)V309.CB) [> 4.6883 = 7.8138 < 10.1580] w=0.0683 to align # Constraint # added constraint: constraint((T0310)L16.CB, (T0310)V309.CB) [> 3.3635 = 5.6058 < 7.2875] w=0.0683 to align # Constraint # added constraint: constraint((T0310)N336.CB, (T0310)W352.CB) [> 3.4364 = 5.7274 < 7.4456] w=0.0683 to align # Constraint # added constraint: constraint((T0310)D328.CB, (T0310)A348.CB) [> 4.6106 = 7.6843 < 9.9896] w=0.0683 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)F351.CB) [> 4.1701 = 6.9502 < 9.0353] w=0.0683 to align # Constraint # added constraint: constraint((T0310)S325.CB, (T0310)C349.CB) [> 4.3442 = 7.2403 < 9.4124] w=0.0683 to align # Constraint # added constraint: constraint((T0310)I316.CB, (T0310)A338.CB) [> 3.6662 = 6.1104 < 7.9435] w=0.0683 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)E335.CB) [> 4.7717 = 7.9528 < 10.3387] w=0.0683 to align # Constraint # added constraint: constraint((T0310)Y222.CB, (T0310)A338.CB) [> 4.3845 = 7.3074 < 9.4997] w=0.0683 to align # Constraint # added constraint: constraint((T0310)I27.CB, (T0310)C305.CB) [> 4.0982 = 6.8303 < 8.8794] w=0.0663 to align # Constraint # added constraint: constraint((T0310)H220.CB, (T0310)H326.CB) [> 3.6000 = 6.0001 < 7.8001] w=0.0663 to align # Constraint # added constraint: constraint((T0310)I191.CB, (T0310)V383.CB) [> 4.3867 = 7.3112 < 9.5045] w=0.0642 to align # Constraint # added constraint: constraint((T0310)R234.CB, (T0310)F351.CB) [> 4.5640 = 7.6067 < 9.8887] w=0.0642 to align # Constraint # added constraint: constraint((T0310)I269.CB, (T0310)I306.CB) [> 4.0434 = 6.7390 < 8.7608] w=0.0642 to align # Constraint # added constraint: constraint((T0310)L16.CB, (T0310)G113.CA) [> 4.7778 = 7.9630 < 10.3519] w=0.0621 to align # Constraint # added constraint: constraint((T0310)L19.CB, (T0310)P111.CB) [> 4.4731 = 7.4552 < 9.6918] w=0.0621 to align # Constraint # added constraint: constraint((T0310)M15.CB, (T0310)G139.CA) [> 4.6718 = 7.7864 < 10.1223] w=0.0621 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)I187.CB) [> 4.7792 = 7.9653 < 10.3548] w=0.0621 to align # Constraint # added constraint: constraint((T0310)L366.CB, (T0310)V383.CB) [> 4.5864 = 7.6440 < 9.9372] w=0.0621 to align # Constraint # added constraint: constraint((T0310)I42.CB, (T0310)L158.CB) [> 4.0648 = 6.7746 < 8.8070] w=0.0621 to align # Constraint # added constraint: constraint((T0310)G361.CA, (T0310)V383.CB) [> 4.3079 = 7.1798 < 9.3337] w=0.0621 to align # Constraint # added constraint: constraint((T0310)S287.CB, (T0310)L302.CB) [> 3.4963 = 5.8271 < 7.5752] w=0.0621 to align # Constraint # added constraint: constraint((T0310)L163.CB, (T0310)Q173.CB) [> 4.1320 = 6.8866 < 8.9526] w=0.0621 to align # Constraint # added constraint: constraint((T0310)T1.CB, (T0310)N176.CB) [> 3.7370 = 6.2284 < 8.0969] w=0.0621 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)L67.CB) [> 4.0170 = 6.6950 < 8.7035] w=0.0621 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)I165.CB) [> 4.6462 = 7.7437 < 10.0669] w=0.0621 to align # Constraint # added constraint: constraint((T0310)S294.CB, (T0310)L304.CB) [> 4.7437 = 7.9062 < 10.2780] w=0.0621 to align # Constraint # added constraint: constraint((T0310)V277.CB, (T0310)L304.CB) [> 3.6559 = 6.0932 < 7.9212] w=0.0621 to align # Constraint # added constraint: constraint((T0310)V277.CB, (T0310)E303.CB) [> 3.6154 = 6.0258 < 7.8335] w=0.0621 to align # Constraint # added constraint: constraint((T0310)T233.CB, (T0310)I269.CB) [> 4.6037 = 7.6727 < 9.9746] w=0.0621 to align # Constraint # added constraint: constraint((T0310)V232.CB, (T0310)I255.CB) [> 4.7351 = 7.8918 < 10.2594] w=0.0621 to align # Constraint # added constraint: constraint((T0310)S225.CB, (T0310)D334.CB) [> 4.4306 = 7.3843 < 9.5996] w=0.0621 to align # Constraint # added constraint: constraint((T0310)S225.CB, (T0310)N311.CB) [> 4.5273 = 7.5454 < 9.8091] w=0.0621 to align # Constraint # added constraint: constraint((T0310)S373.CB, (T0310)E386.CB) [> 4.5062 = 7.5103 < 9.7634] w=0.0621 to align # Constraint # added constraint: constraint((T0310)A368.CB, (T0310)L385.CB) [> 4.6480 = 7.7467 < 10.0707] w=0.0621 to align # Constraint # added constraint: constraint((T0310)A338.CB, (T0310)V350.CB) [> 4.7533 = 7.9222 < 10.2989] w=0.0621 to align # Constraint # added constraint: constraint((T0310)P111.CB, (T0310)A133.CB) [> 4.7811 = 7.9685 < 10.3591] w=0.0621 to align # Constraint # added constraint: constraint((T0310)R96.CB, (T0310)L394.CB) [> 4.6950 = 7.8251 < 10.1726] w=0.0621 to align # Constraint # added constraint: constraint((T0310)V90.CB, (T0310)G137.CA) [> 3.5473 = 5.9123 < 7.6859] w=0.0621 to align # Constraint # added constraint: constraint((T0310)M221.CB, (T0310)E251.CB) [> 4.5081 = 7.5135 < 9.7676] w=0.0621 to align # Constraint # added constraint: constraint((T0310)I218.CB, (T0310)C305.CB) [> 4.7529 = 7.9215 < 10.2979] w=0.0621 to align # Constraint # added constraint: constraint((T0310)P192.CB, (T0310)D201.CB) [> 4.7065 = 7.8442 < 10.1975] w=0.0621 to align # Constraint # added constraint: constraint((T0310)K143.CB, (T0310)Q173.CB) [> 4.7473 = 7.9121 < 10.2857] w=0.0621 to align # Constraint # added constraint: constraint((T0310)H326.CB, (T0310)V350.CB) [> 4.7523 = 7.9205 < 10.2966] w=0.0621 to align # Constraint # added constraint: constraint((T0310)P127.CB, (T0310)I154.CB) [> 3.2072 = 5.3453 < 6.9489] w=0.0476 to align # Constraint # added constraint: constraint((T0310)I154.CB, (T0310)I165.CB) [> 3.2208 = 5.3680 < 6.9783] w=0.0455 to align # Constraint # added constraint: constraint((T0310)I154.CB, (T0310)H166.CB) [> 3.7298 = 6.2163 < 8.0812] w=0.0455 to align # Constraint # added constraint: constraint((T0310)L16.CB, (T0310)C305.CB) [> 3.1404 = 5.2340 < 6.8042] w=0.0455 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)Q197.CB) [> 2.7222 = 4.5371 < 5.8982] w=0.0455 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)L198.CB) [> 2.9396 = 4.8994 < 6.3692] w=0.0455 to align # Constraint # added constraint: constraint((T0310)I28.CB, (T0310)D201.CB) [> 3.5021 = 5.8369 < 7.5880] w=0.0455 to align # Constraint # added constraint: constraint((T0310)L31.CB, (T0310)L198.CB) [> 4.3126 = 7.1876 < 9.3439] w=0.0455 to align # Constraint # added constraint: constraint((T0310)A32.CB, (T0310)L198.CB) [> 3.8592 = 6.4320 < 8.3616] w=0.0455 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)L174.CB) [> 3.5382 = 5.8970 < 7.6661] w=0.0455 to align # Constraint # added constraint: constraint((T0310)A246.CB, (T0310)Y299.CB) [> 4.5089 = 7.5148 < 9.7693] w=0.0455 to align # Constraint # added constraint: constraint((T0310)L254.CB, (T0310)C305.CB) [> 3.0969 = 5.1615 < 6.7099] w=0.0455 to align # Constraint # added constraint: constraint((T0310)I255.CB, (T0310)C305.CB) [> 4.4204 = 7.3674 < 9.5776] w=0.0455 to align # Constraint # added constraint: constraint((T0310)L272.CB, (T0310)Y299.CB) [> 4.3905 = 7.3175 < 9.5127] w=0.0455 to align # Constraint # added constraint: constraint((T0310)V277.CB, (T0310)V292.CB) [> 4.0389 = 6.7316 < 8.7510] w=0.0455 to align # Constraint # added constraint: constraint((T0310)I279.CB, (T0310)V292.CB) [> 2.7859 = 4.6431 < 6.0360] w=0.0455 to align # Constraint # added constraint: constraint((T0310)R178.CB, (T0310)S195.CB) [> 3.5505 = 5.9174 < 7.6926] w=0.0455 to align # Constraint # added constraint: constraint((T0310)T233.CB, (T0310)L272.CB) [> 2.6663 = 4.4439 < 5.7770] w=0.0455 to align # Constraint # added constraint: constraint((T0310)D230.CB, (T0310)E275.CB) [> 4.3755 = 7.2925 < 9.4803] w=0.0455 to align # Constraint # added constraint: constraint((T0310)F351.CB, (T0310)D360.CB) [> 4.6097 = 7.6829 < 9.9878] w=0.0435 to align # Constraint # added constraint: constraint((T0310)S355.CB, (T0310)S373.CB) [> 4.1899 = 6.9832 < 9.0782] w=0.0414 to align # Constraint # added constraint: constraint((T0310)T233.CB, (T0310)F265.CB) [> 4.6406 = 7.7343 < 10.0545] w=0.0414 to align # Constraint # added constraint: constraint((T0310)W393.CB, (T0310)V402.CB) [> 4.6312 = 7.7186 < 10.0342] w=0.0414 to align # Constraint # added constraint: constraint((T0310)W393.CB, (T0310)F405.CB) [> 3.6958 = 6.1597 < 8.0076] w=0.0414 to align # Constraint # added constraint: constraint((T0310)L394.CB, (T0310)F405.CB) [> 2.8994 = 4.8324 < 6.2821] w=0.0414 to align # Constraint # added constraint: constraint((T0310)L394.CB, (T0310)L414.CB) [> 3.7458 = 6.2431 < 8.1160] w=0.0414 to align # Constraint # added constraint: constraint((T0310)V108.CB, (T0310)Y413.CB) [> 3.0862 = 5.1436 < 6.6867] w=0.0414 to align # Constraint # added constraint: constraint((T0310)L115.CB, (T0310)G387.CA) [> 3.9767 = 6.6279 < 8.6162] w=0.0414 to align # Constraint # added constraint: constraint((T0310)R95.CB, (T0310)L414.CB) [> 4.0837 = 6.8062 < 8.8480] w=0.0414 to align # Constraint # added constraint: constraint((T0310)I191.CB, (T0310)E369.CB) [> 4.5877 = 7.6462 < 9.9400] w=0.0414 to align # Constraint # added constraint: constraint((T0310)M212.CB, (T0310)T391.CB) [> 3.6122 = 6.0203 < 7.8264] w=0.0414 to align # Constraint # added constraint: constraint((T0310)V93.CB, (T0310)W393.CB) [> 4.5303 = 7.5504 < 9.8155] w=0.0414 to align # Constraint # added constraint: constraint((T0310)L126.CB, (T0310)L174.CB) [> 4.7319 = 7.8866 < 10.2526] w=0.0414 to align # Constraint # added constraint: constraint((T0310)A281.CB, (T0310)I306.CB) [> 2.6320 = 4.3866 < 5.7026] w=0.0414 to align # Constraint # added constraint: constraint((T0310)V292.CB, (T0310)E307.CB) [> 4.7185 = 7.8642 < 10.2235] w=0.0414 to align # Constraint # added constraint: constraint((T0310)F364.CB, (T0310)L385.CB) [> 4.6778 = 7.7964 < 10.1353] w=0.0414 to align # Constraint # added constraint: constraint((T0310)I269.CB, (T0310)I279.CB) [> 3.0449 = 5.0748 < 6.5972] w=0.0414 to align # Constraint # added constraint: constraint((T0310)K278.CB, (T0310)E303.CB) [> 2.8606 = 4.7676 < 6.1979] w=0.0414 to align # Constraint # added constraint: constraint((T0310)K278.CB, (T0310)L304.CB) [> 4.4161 = 7.3601 < 9.5681] w=0.0414 to align # Constraint # added constraint: constraint((T0310)I279.CB, (T0310)E303.CB) [> 4.6095 = 7.6825 < 9.9873] w=0.0414 to align # Constraint # added constraint: constraint((T0310)R178.CB, (T0310)A206.CB) [> 3.6969 = 6.1615 < 8.0100] w=0.0228 to align # Constraint # added constraint: constraint((T0310)P127.CB, (T0310)A354.CB) [> 4.4482 = 7.4138 < 9.6379] w=0.0228 to align # Constraint # added constraint: constraint((T0310)P127.CB, (T0310)A162.CB) [> 3.6801 = 6.1336 < 7.9736] w=0.0228 to align # Constraint # added constraint: constraint((T0310)S121.CB, (T0310)V175.CB) [> 3.7889 = 6.3147 < 8.2092] w=0.0228 to align # Constraint # added constraint: constraint((T0310)S121.CB, (T0310)K143.CB) [> 3.6156 = 6.0260 < 7.8338] w=0.0228 to align # Constraint # added constraint: constraint((T0310)L116.CB, (T0310)T177.CB) [> 2.1155 = 3.5258 < 4.5835] w=0.0228 to align # Constraint # added constraint: constraint((T0310)Q38.CB, (T0310)L198.CB) [> 4.2706 = 7.1177 < 9.2531] w=0.0228 to align # Constraint # added constraint: constraint((T0310)S239.CB, (T0310)F291.CB) [> 2.7556 = 4.5927 < 5.9706] w=0.0228 to align # Constraint # added constraint: constraint((T0310)F351.CB, (T0310)G361.CA) [> 4.3587 = 7.2645 < 9.4439] w=0.0228 to align # Constraint # added constraint: constraint((T0310)R193.CB, (T0310)S355.CB) [> 4.2603 = 7.1004 < 9.2305] w=0.0228 to align # Constraint # added constraint: constraint((T0310)I191.CB, (T0310)S355.CB) [> 4.6259 = 7.7098 < 10.0227] w=0.0228 to align # Constraint # added constraint: constraint((T0310)A9.CB, (T0310)V168.CB) [> 3.8499 = 6.4165 < 8.3415] w=0.0207 to align # Constraint # added constraint: constraint((T0310)S89.CB, (T0310)Y413.CB) [> 2.6306 = 4.3843 < 5.6996] w=0.0207 to align # Constraint # added constraint: constraint((T0310)D238.CB, (T0310)F351.CB) [> 4.7691 = 7.9485 < 10.3331] w=0.0207 to align # Constraint # added constraint: constraint((T0310)K392.CB, (T0310)F405.CB) [> 4.6664 = 7.7774 < 10.1106] w=0.0207 to align # Constraint # added constraint: constraint((T0310)V181.CB, (T0310)A206.CB) [> 3.6875 = 6.1459 < 7.9897] w=0.0207 to align # Constraint # added constraint: constraint((T0310)L183.CB, (T0310)D201.CB) [> 4.7183 = 7.8638 < 10.2229] w=0.0207 to align # Constraint # added constraint: constraint((T0310)K146.CB, (T0310)V175.CB) [> 3.2972 = 5.4953 < 7.1439] w=0.0207 to align # Constraint # added constraint: constraint((T0310)K143.CB, (T0310)L183.CB) [> 3.8579 = 6.4299 < 8.3589] w=0.0207 to align # Constraint # added constraint: constraint((T0310)L43.CB, (T0310)K207.CB) [> 4.1080 = 6.8466 < 8.9006] w=0.0207 to align # Constraint # added constraint: constraint((T0310)A32.CB, (T0310)Q197.CB) [> 3.6623 = 6.1038 < 7.9349] w=0.0207 to align # Constraint # added constraint: constraint((T0310)D188.CB, (T0310)V211.CB) [> 3.7298 = 6.2164 < 8.0813] w=0.0021 to align # Constraint # added constraint: constraint((T0310)I112.CB, (T0310)V211.CB) [> 4.7327 = 7.8879 < 10.2543] w=0.0021 to align # SetCost created cost = # ( 1.0000 * align ) # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/constraints_v3/T0310/ # command:# reading script from file servers-clean.under # Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0310/decoys/ # ReadConformPDB reading from PDB file rotate180.renum.pdb.gz looking for model 1 # choosing archetypes in rotamer library # Found a chain break before 399 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file rotateTake2.renum.pdb.gz looking for model 1 # Found a chain break before 420 # copying to AlignedFragments data structure # ReadConformPDB reading from PDB file ../tetramer/decoys/tetramer3-1euhA.pdb.gz looking for chain 'A' model 1 # Found a chain break before 420 # copying to AlignedFragments data structure # naming current conformation tetramer//tetramer3-1euhA # ReadConformPDB reading from PDB file ../tetramer/decoys/tetramer4-1euhA.pdb.gz looking for chain 'A' model 1 # Found a chain break before 420 # copying to AlignedFragments data structure # naming current conformation tetramer//tetramer4-1euhA # ReadConformPDB reading from PDB file ../tetramer/decoys/tetramer5-1euhA.pdb.gz looking for chain 'A' model 1 # Found a chain break before 420 # copying to AlignedFragments data structure # naming current conformation tetramer//tetramer5-1euhA # ReadConformPDB reading from PDB file ../tetramer/decoys/tetramer6-1euhA.pdb.gz looking for chain 'A' model 1 # Found a chain break before 399 # copying to AlignedFragments data structure # naming current conformation tetramer//tetramer6-1euhA # ReadConformPDB reading from PDB file ../tetramer/decoys/tetramer7-1euhA.pdb.gz looking for chain 'A' model 1 # Found a chain break before 399 # copying to AlignedFragments data structure # naming current conformation tetramer//tetramer7-1euhA # ReadConformPDB reading from PDB file ../tetramer/decoys/tetramer8-1euhA.pdb.gz looking for chain 'A' model 1 # Found a chain break before 399 # copying to AlignedFragments data structure # naming current conformation tetramer//tetramer8-1euhA # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS1 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS2 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS3 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS4 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_POPULUS_TS5 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS1 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS2 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS3 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS4 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_RECOM_TS5 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS1 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS2 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS3 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS4 # ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation 3D-JIGSAW_TS5 # ReadConformPDB reading from PDB file servers/3Dpro_TS1.pdb.gz looking for model 1 # Found a chain break before 401 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS1 # ReadConformPDB reading from PDB file servers/3Dpro_TS2.pdb.gz looking for model 1 # Found a chain break before 296 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS2 # ReadConformPDB reading from PDB file servers/3Dpro_TS3.pdb.gz looking for model 1 # Found a chain break before 417 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS3 # ReadConformPDB reading from PDB file servers/3Dpro_TS4.pdb.gz looking for model 1 # Found a chain break before 369 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS4 # ReadConformPDB reading from PDB file servers/3Dpro_TS5.pdb.gz looking for model 1 # Found a chain break before 394 # copying to AlignedFragments data structure # naming current conformation 3Dpro_TS5 # ReadConformPDB reading from PDB file servers/ABIpro_TS1.pdb.gz looking for model 1 # Found a chain break before 413 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS1 # ReadConformPDB reading from PDB file servers/ABIpro_TS2.pdb.gz looking for model 1 # Found a chain break before 357 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS2 # ReadConformPDB reading from PDB file servers/ABIpro_TS3.pdb.gz looking for model 1 # Found a chain break before 424 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS3 # ReadConformPDB reading from PDB file servers/ABIpro_TS4.pdb.gz looking for model 1 # Found a chain break before 423 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS4 # ReadConformPDB reading from PDB file servers/ABIpro_TS5.pdb.gz looking for model 1 # Found a chain break before 393 # copying to AlignedFragments data structure # naming current conformation ABIpro_TS5 # ReadConformPDB reading from PDB file servers/BayesHH_TS1.pdb.gz looking for model 1 # Found a chain break before 391 # copying to AlignedFragments data structure # naming current conformation BayesHH_TS1 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS1.pdb.gz looking for model 1 # Found a chain break before 412 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS1 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS2.pdb.gz looking for model 1 # Found a chain break before 291 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS2 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS3.pdb.gz looking for model 1 # Found a chain break before 291 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS3 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS4.pdb.gz looking for model 1 # Found a chain break before 412 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS4 # ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS5.pdb.gz looking for model 1 # Found a chain break before 291 # copying to AlignedFragments data structure # naming current conformation Bilab-ENABLE_TS5 # ReadConformPDB reading from PDB file servers/CIRCLE_TS1.pdb.gz looking for model 1 # Found a chain break before 418 # copying to AlignedFragments data structure # naming current conformation CIRCLE_TS1 # ReadConformPDB reading from PDB file servers/CIRCLE_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS2 # ReadConformPDB reading from PDB file servers/CIRCLE_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS3 # ReadConformPDB reading from PDB file servers/CIRCLE_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS4 # ReadConformPDB reading from PDB file servers/CIRCLE_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation CIRCLE_TS5 # ReadConformPDB reading from PDB file servers/CPHmodels_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation CPHmodels_TS1 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS1 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS2 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS3 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS4 # ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation CaspIta-FOX_TS5 # ReadConformPDB reading from PDB file servers/Distill_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Distill_TS1 # ReadConformPDB reading from PDB file servers/Distill_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Distill_TS2 # ReadConformPDB reading from PDB file servers/Distill_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Distill_TS3 # ReadConformPDB reading from PDB file servers/Distill_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Distill_TS4 # ReadConformPDB reading from PDB file servers/Distill_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Distill_TS5 # ReadConformPDB reading from PDB file servers/FAMSD_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation FAMSD_TS1 # ReadConformPDB reading from PDB file servers/FAMSD_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FAMSD_TS2 # ReadConformPDB reading from PDB file servers/FAMSD_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FAMSD_TS3 # ReadConformPDB reading from PDB file servers/FAMSD_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FAMSD_TS4 # ReadConformPDB reading from PDB file servers/FAMSD_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FAMSD_TS5 # ReadConformPDB reading from PDB file servers/FAMS_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation FAMS_TS1 # ReadConformPDB reading from PDB file servers/FAMS_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FAMS_TS2 # ReadConformPDB reading from PDB file servers/FAMS_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FAMS_TS3 # ReadConformPDB reading from PDB file servers/FAMS_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FAMS_TS4 # ReadConformPDB reading from PDB file servers/FAMS_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FAMS_TS5 # ReadConformPDB reading from PDB file servers/FOLDpro_TS1.pdb.gz looking for model 1 # Found a chain break before 382 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS1 # ReadConformPDB reading from PDB file servers/FOLDpro_TS2.pdb.gz looking for model 1 # Found a chain break before 382 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS2 # ReadConformPDB reading from PDB file servers/FOLDpro_TS3.pdb.gz looking for model 1 # Found a chain break before 375 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS3 # ReadConformPDB reading from PDB file servers/FOLDpro_TS4.pdb.gz looking for model 1 # Found a chain break before 391 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS4 # ReadConformPDB reading from PDB file servers/FOLDpro_TS5.pdb.gz looking for model 1 # Found a chain break before 298 # copying to AlignedFragments data structure # naming current conformation FOLDpro_TS5 # ReadConformPDB reading from PDB file servers/FORTE1_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FORTE1_AL1 # ReadConformPDB reading from PDB file servers/FORTE1_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FORTE1_AL2 # ReadConformPDB reading from PDB file servers/FORTE1_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FORTE1_AL3 # ReadConformPDB reading from PDB file servers/FORTE1_AL4.pdb.gz looking for model 1 Skipped atom 254, because occupancy 1 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 256, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 258, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 260, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 942, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 944, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 946, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 948, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 1490, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 1492, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 1494, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz Skipped atom 1496, because occupancy 1.000 <= existing 1.000 in servers/FORTE1_AL4.pdb.gz # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FORTE1_AL4 # ReadConformPDB reading from PDB file servers/FORTE1_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FORTE1_AL5 # ReadConformPDB reading from PDB file servers/FORTE2_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FORTE2_AL1 # ReadConformPDB reading from PDB file servers/FORTE2_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FORTE2_AL2 # ReadConformPDB reading from PDB file servers/FORTE2_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FORTE2_AL3 # ReadConformPDB reading from PDB file servers/FORTE2_AL4.pdb.gz looking for model 1 Skipped atom 254, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 256, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 258, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 260, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 942, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 944, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 946, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 948, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 1490, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 1492, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 1494, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz Skipped atom 1496, because occupancy 1.000 <= existing 1.000 in servers/FORTE2_AL4.pdb.gz # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FORTE2_AL4 # ReadConformPDB reading from PDB file servers/FORTE2_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FORTE2_AL5 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS1.pdb.gz looking for model 1 # Found a chain break before 406 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS1 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS2.pdb.gz looking for model 1 # Found a chain break before 424 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS2 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS3.pdb.gz looking for model 1 # Found a chain break before 423 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS3 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS4.pdb.gz looking for model 1 # Found a chain break before 411 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS4 # ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS5.pdb.gz looking for model 1 # Found a chain break before 424 # copying to AlignedFragments data structure # naming current conformation FPSOLVER-SERVER_TS5 # ReadConformPDB reading from PDB file servers/FUGMOD_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS1 # ReadConformPDB reading from PDB file servers/FUGMOD_TS2.pdb.gz looking for model 1 # Found a chain break before 378 # copying to AlignedFragments data structure # naming current conformation FUGMOD_TS2 # ReadConformPDB reading from PDB file servers/FUGMOD_TS3.pdb.gz looking for model 1 # Found a chain break before 403 # copying to AlignedFragments data structure # naming current conformation FUGMOD_TS3 # ReadConformPDB reading from PDB file servers/FUGMOD_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FUGMOD_TS4 # ReadConformPDB reading from PDB file servers/FUGMOD_TS5.pdb.gz looking for model 1 # Found a chain break before 364 # copying to AlignedFragments data structure # naming current conformation FUGMOD_TS5 # ReadConformPDB reading from PDB file servers/FUGUE_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FUGUE_AL1 # ReadConformPDB reading from PDB file servers/FUGUE_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FUGUE_AL2 # ReadConformPDB reading from PDB file servers/FUGUE_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FUGUE_AL3 # ReadConformPDB reading from PDB file servers/FUGUE_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FUGUE_AL4 # ReadConformPDB reading from PDB file servers/FUGUE_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FUGUE_AL5 # ReadConformPDB reading from PDB file servers/FUNCTION_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FUNCTION_TS1 # ReadConformPDB reading from PDB file servers/FUNCTION_TS2.pdb.gz looking for model 1 # Found a chain break before 421 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS2 # ReadConformPDB reading from PDB file servers/FUNCTION_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FUNCTION_TS3 # ReadConformPDB reading from PDB file servers/FUNCTION_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation FUNCTION_TS4 # ReadConformPDB reading from PDB file servers/FUNCTION_TS5.pdb.gz looking for model 1 # Found a chain break before 420 # copying to AlignedFragments data structure # naming current conformation FUNCTION_TS5 # ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation GeneSilicoMetaServer_TS1 # ReadConformPDB reading from PDB file servers/HHpred1_TS1.pdb.gz looking for model 1 # Found a chain break before 391 # copying to AlignedFragments data structure # naming current conformation HHpred1_TS1 # ReadConformPDB reading from PDB file servers/HHpred2_TS1.pdb.gz looking for model 1 # Found a chain break before 391 # copying to AlignedFragments data structure # naming current conformation HHpred2_TS1 # ReadConformPDB reading from PDB file servers/HHpred3_TS1.pdb.gz looking for model 1 # Found a chain break before 391 # copying to AlignedFragments data structure # naming current conformation HHpred3_TS1 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS1 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS2 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS3 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS4 # ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Huber-Torda-Server_TS5 # ReadConformPDB reading from PDB file servers/LOOPP_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation LOOPP_TS1 # ReadConformPDB reading from PDB file servers/LOOPP_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation LOOPP_TS2 # ReadConformPDB reading from PDB file servers/LOOPP_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation LOOPP_TS3 # ReadConformPDB reading from PDB file servers/LOOPP_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation LOOPP_TS4 # ReadConformPDB reading from PDB file servers/LOOPP_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation LOOPP_TS5 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS1.pdb.gz looking for model 1 # Found a chain break before 404 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS1 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS2.pdb.gz looking for model 1 # Found a chain break before 419 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS2 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS3.pdb.gz looking for model 1 # Found a chain break before 376 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS3 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS4.pdb.gz looking for model 1 # Found a chain break before 420 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS4 # ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS5.pdb.gz looking for model 1 # Found a chain break before 407 # copying to AlignedFragments data structure # naming current conformation Ma-OPUS-server_TS5 # ReadConformPDB reading from PDB file servers/MetaTasser_TS1.pdb.gz looking for model 1 # Found a chain break before 419 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS1 # ReadConformPDB reading from PDB file servers/MetaTasser_TS2.pdb.gz looking for model 1 # Found a chain break before 421 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS2 # ReadConformPDB reading from PDB file servers/MetaTasser_TS3.pdb.gz looking for model 1 # Found a chain break before 412 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS3 # ReadConformPDB reading from PDB file servers/MetaTasser_TS4.pdb.gz looking for model 1 # Found a chain break before 424 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS4 # ReadConformPDB reading from PDB file servers/MetaTasser_TS5.pdb.gz looking for model 1 # Found a chain break before 421 # copying to AlignedFragments data structure # naming current conformation MetaTasser_TS5 # ReadConformPDB reading from PDB file servers/NN_PUT_lab_TS1.pdb.gz looking for model 1 # Found a chain break before 294 # copying to AlignedFragments data structure # naming current conformation NN_PUT_lab_TS1 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS1.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS1 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS2.pdb.gz looking for model 1 # naming current conformation PROTINFO-AB_TS2 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation PROTINFO-AB_TS3 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation PROTINFO-AB_TS4 # ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation PROTINFO-AB_TS5 # ReadConformPDB reading from PDB file servers/PROTINFO_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation PROTINFO_TS1 # ReadConformPDB reading from PDB file servers/PROTINFO_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation PROTINFO_TS2 # ReadConformPDB reading from PDB file servers/PROTINFO_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation PROTINFO_TS3 # ReadConformPDB reading from PDB file servers/PROTINFO_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation PROTINFO_TS4 # ReadConformPDB reading from PDB file servers/PROTINFO_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation PROTINFO_TS5 # ReadConformPDB reading from PDB file servers/Pcons6_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Pcons6_TS1 # ReadConformPDB reading from PDB file servers/Pcons6_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Pcons6_TS2 # ReadConformPDB reading from PDB file servers/Pcons6_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Pcons6_TS3 # ReadConformPDB reading from PDB file servers/Pcons6_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Pcons6_TS4 # ReadConformPDB reading from PDB file servers/Pcons6_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Pcons6_TS5 # ReadConformPDB reading from PDB file servers/Phyre-1_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Phyre-1_TS1 # ReadConformPDB reading from PDB file servers/Phyre-2_TS1.pdb.gz looking for model 1 # Found a chain break before 375 # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS1 # ReadConformPDB reading from PDB file servers/Phyre-2_TS2.pdb.gz looking for model 1 # Found a chain break before 424 # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS2 # ReadConformPDB reading from PDB file servers/Phyre-2_TS3.pdb.gz looking for model 1 # Found a chain break before 424 # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS3 # ReadConformPDB reading from PDB file servers/Phyre-2_TS4.pdb.gz looking for model 1 # Found a chain break before 424 # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS4 # ReadConformPDB reading from PDB file servers/Phyre-2_TS5.pdb.gz looking for model 1 # Found a chain break before 424 # copying to AlignedFragments data structure # naming current conformation Phyre-2_TS5 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS1 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS2 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS3 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS4 # ReadConformPDB reading from PDB file servers/Pmodeller6_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation Pmodeller6_TS5 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS1.pdb.gz looking for model 1 # Found a chain break before 370 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS1 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS2.pdb.gz looking for model 1 # Found a chain break before 359 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS2 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS3.pdb.gz looking for model 1 # Found a chain break before 101 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS3 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS4.pdb.gz looking for model 1 # Found a chain break before 374 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS4 # ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS5.pdb.gz looking for model 1 # Found a chain break before 378 # copying to AlignedFragments data structure # naming current conformation RAPTOR-ACE_TS5 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS1.pdb.gz looking for model 1 # Found a chain break before 423 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS1 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS2.pdb.gz looking for model 1 # Found a chain break before 421 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS2 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS3.pdb.gz looking for model 1 # Found a chain break before 422 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS3 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS4.pdb.gz looking for model 1 # Found a chain break before 420 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS4 # ReadConformPDB reading from PDB file servers/RAPTORESS_TS5.pdb.gz looking for model 1 # Found a chain break before 420 # copying to AlignedFragments data structure # naming current conformation RAPTORESS_TS5 # ReadConformPDB reading from PDB file servers/RAPTOR_TS1.pdb.gz looking for model 1 # Found a chain break before 377 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS1 # ReadConformPDB reading from PDB file servers/RAPTOR_TS2.pdb.gz looking for model 1 # Found a chain break before 388 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS2 # ReadConformPDB reading from PDB file servers/RAPTOR_TS3.pdb.gz looking for model 1 # Found a chain break before 372 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS3 # ReadConformPDB reading from PDB file servers/RAPTOR_TS4.pdb.gz looking for model 1 # Found a chain break before 266 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS4 # ReadConformPDB reading from PDB file servers/RAPTOR_TS5.pdb.gz looking for model 1 # Found a chain break before 379 # copying to AlignedFragments data structure # naming current conformation RAPTOR_TS5 # ReadConformPDB reading from PDB file servers/ROBETTA_TS1.pdb.gz looking for model 1 # Found a chain break before 303 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS1 # ReadConformPDB reading from PDB file servers/ROBETTA_TS2.pdb.gz looking for model 1 # Found a chain break before 378 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS2 # ReadConformPDB reading from PDB file servers/ROBETTA_TS3.pdb.gz looking for model 1 # Found a chain break before 417 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS3 # ReadConformPDB reading from PDB file servers/ROBETTA_TS4.pdb.gz looking for model 1 # Found a chain break before 372 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS4 # ReadConformPDB reading from PDB file servers/ROBETTA_TS5.pdb.gz looking for model 1 # Found a chain break before 300 # copying to AlignedFragments data structure # naming current conformation ROBETTA_TS5 # ReadConformPDB reading from PDB file servers/ROKKY_TS1.pdb.gz looking for model 1 # Found a chain break before 180 # copying to AlignedFragments data structure # naming current conformation ROKKY_TS1 # ReadConformPDB reading from PDB file servers/ROKKY_TS2.pdb.gz looking for model 1 # Found a chain break before 387 # copying to AlignedFragments data structure # naming current conformation ROKKY_TS2 # ReadConformPDB reading from PDB file servers/ROKKY_TS3.pdb.gz looking for model 1 # Found a chain break before 383 # copying to AlignedFragments data structure # naming current conformation ROKKY_TS3 # ReadConformPDB reading from PDB file servers/ROKKY_TS4.pdb.gz looking for model 1 # Found a chain break before 369 # copying to AlignedFragments data structure # naming current conformation ROKKY_TS4 # ReadConformPDB reading from PDB file servers/ROKKY_TS5.pdb.gz looking for model 1 # Found a chain break before 383 # copying to AlignedFragments data structure # naming current conformation ROKKY_TS5 # ReadConformPDB reading from PDB file servers/SAM-T02_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL1 # ReadConformPDB reading from PDB file servers/SAM-T02_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL2 # ReadConformPDB reading from PDB file servers/SAM-T02_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL3 # ReadConformPDB reading from PDB file servers/SAM-T02_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL4 # ReadConformPDB reading from PDB file servers/SAM-T02_AL5.pdb.gz looking for model 1 Skipped atom 246, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 248, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 250, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 252, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 926, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 928, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 930, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 932, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 1474, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 1476, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 1478, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz Skipped atom 1480, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL5.pdb.gz # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM-T02_AL5 # ReadConformPDB reading from PDB file servers/SAM-T99_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM-T99_AL1 # ReadConformPDB reading from PDB file servers/SAM-T99_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM-T99_AL2 # ReadConformPDB reading from PDB file servers/SAM-T99_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM-T99_AL3 # ReadConformPDB reading from PDB file servers/SAM-T99_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM-T99_AL4 # ReadConformPDB reading from PDB file servers/SAM-T99_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM-T99_AL5 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS1.pdb.gz looking for model 1 # Found a chain break before 397 # copying to AlignedFragments data structure # naming current conformation SAM_T06_server_TS1 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS2 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS3 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS4 # ReadConformPDB reading from PDB file servers/SAM_T06_server_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation SAM_T06_server_TS5 # ReadConformPDB reading from PDB file servers/SP3_TS1.pdb.gz looking for model 1 # Found a chain break before 294 # copying to AlignedFragments data structure # naming current conformation SP3_TS1 # ReadConformPDB reading from PDB file servers/SP3_TS2.pdb.gz looking for model 1 # Found a chain break before 277 # copying to AlignedFragments data structure # naming current conformation SP3_TS2 # ReadConformPDB reading from PDB file servers/SP3_TS3.pdb.gz looking for model 1 # Found a chain break before 376 # copying to AlignedFragments data structure # naming current conformation SP3_TS3 # ReadConformPDB reading from PDB file servers/SP3_TS4.pdb.gz looking for model 1 # Found a chain break before 376 # copying to AlignedFragments data structure # naming current conformation SP3_TS4 # ReadConformPDB reading from PDB file servers/SP3_TS5.pdb.gz looking for model 1 # Found a chain break before 359 # copying to AlignedFragments data structure # naming current conformation SP3_TS5 # ReadConformPDB reading from PDB file servers/SP4_TS1.pdb.gz looking for model 1 # Found a chain break before 294 # copying to AlignedFragments data structure # naming current conformation SP4_TS1 # ReadConformPDB reading from PDB file servers/SP4_TS2.pdb.gz looking for model 1 # Found a chain break before 278 # copying to AlignedFragments data structure # naming current conformation SP4_TS2 # ReadConformPDB reading from PDB file servers/SP4_TS3.pdb.gz looking for model 1 # Found a chain break before 406 # copying to AlignedFragments data structure # naming current conformation SP4_TS3 # ReadConformPDB reading from PDB file servers/SP4_TS4.pdb.gz looking for model 1 # Found a chain break before 377 # copying to AlignedFragments data structure # naming current conformation SP4_TS4 # ReadConformPDB reading from PDB file servers/SP4_TS5.pdb.gz looking for model 1 # Found a chain break before 413 # copying to AlignedFragments data structure # naming current conformation SP4_TS5 # ReadConformPDB reading from PDB file servers/SPARKS2_TS1.pdb.gz looking for model 1 # Found a chain break before 294 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS1 # ReadConformPDB reading from PDB file servers/SPARKS2_TS2.pdb.gz looking for model 1 # Found a chain break before 289 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS2 # ReadConformPDB reading from PDB file servers/SPARKS2_TS3.pdb.gz looking for model 1 # Found a chain break before 387 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS3 # ReadConformPDB reading from PDB file servers/SPARKS2_TS4.pdb.gz looking for model 1 # Found a chain break before 356 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS4 # ReadConformPDB reading from PDB file servers/SPARKS2_TS5.pdb.gz looking for model 1 # Found a chain break before 380 # copying to AlignedFragments data structure # naming current conformation SPARKS2_TS5 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS1 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS2 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS3 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS4 # ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_bnmx_TS5 # ReadConformPDB reading from PDB file servers/UNI-EID_expm_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_expm_TS1 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL1 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL2 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL3 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL4 # ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation UNI-EID_sfst_AL5 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS1.pdb.gz looking for model 1 # Found a chain break before 413 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS1 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS2.pdb.gz looking for model 1 # Found a chain break before 422 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS2 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS3.pdb.gz looking for model 1 # Found a chain break before 424 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS3 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS4.pdb.gz looking for model 1 # Found a chain break before 420 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS4 # ReadConformPDB reading from PDB file servers/Zhang-Server_TS5.pdb.gz looking for model 1 # Found a chain break before 294 # copying to AlignedFragments data structure # naming current conformation Zhang-Server_TS5 # ReadConformPDB reading from PDB file servers/beautshot_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation beautshot_TS1 # ReadConformPDB reading from PDB file servers/beautshotbase_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation beautshotbase_TS1 # ReadConformPDB reading from PDB file servers/forecast-s_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation forecast-s_AL1 # ReadConformPDB reading from PDB file servers/forecast-s_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation forecast-s_AL2 # ReadConformPDB reading from PDB file servers/forecast-s_AL3.pdb.gz looking for model 1 Skipped atom 246, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 248, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 250, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 252, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 926, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 928, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 930, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 932, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 1474, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 1476, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 1478, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz Skipped atom 1480, because occupancy 1.000 <= existing 1.000 in servers/forecast-s_AL3.pdb.gz # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation forecast-s_AL3 # ReadConformPDB reading from PDB file servers/forecast-s_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation forecast-s_AL4 # ReadConformPDB reading from PDB file servers/forecast-s_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation forecast-s_AL5 # ReadConformPDB reading from PDB file servers/gtg_AL1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation gtg_AL1 # ReadConformPDB reading from PDB file servers/gtg_AL2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation gtg_AL2 # ReadConformPDB reading from PDB file servers/gtg_AL3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation gtg_AL3 # ReadConformPDB reading from PDB file servers/gtg_AL4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation gtg_AL4 # ReadConformPDB reading from PDB file servers/gtg_AL5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation gtg_AL5 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS1.pdb.gz looking for model 1 # Found a chain break before 287 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS1 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS2.pdb.gz looking for model 1 # Found a chain break before 373 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS2 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS3.pdb.gz looking for model 1 # Found a chain break before 369 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS3 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS4.pdb.gz looking for model 1 # Found a chain break before 271 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS4 # ReadConformPDB reading from PDB file servers/karypis.srv.2_TS5.pdb.gz looking for model 1 # Found a chain break before 379 # copying to AlignedFragments data structure # naming current conformation karypis.srv.2_TS5 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS1.pdb.gz looking for model 1 WARNING: atoms too close: (T0310)M186.O and (T0310)I187.N only 0.000 apart, marking (T0310)I187.N as missing # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS1 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS2.pdb.gz looking for model 1 # Found a chain break before 422 # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS2 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS3.pdb.gz looking for model 1 WARNING: atoms too close: (T0310)R257.O and (T0310)D258.N only 0.000 apart, marking (T0310)D258.N as missing WARNING: atoms too close: (T0310)L411.O and (T0310)K412.N only 0.000 apart, marking (T0310)K412.N as missing # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS3 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS4.pdb.gz looking for model 1 WARNING: atoms too close: (T0310)D360.O and (T0310)G361.N only 0.000 apart, marking (T0310)G361.N as missing WARNING: atoms too close: (T0310)G409.O and (T0310)S410.N only 0.000 apart, marking (T0310)S410.N as missing WARNING: atoms too close: (T0310)P421.O and (T0310)Q422.N only 0.000 apart, marking (T0310)Q422.N as missing # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS4 # ReadConformPDB reading from PDB file servers/karypis.srv.4_TS5.pdb.gz looking for model 1 WARNING: atoms too close: (T0310)I191.O and (T0310)P192.N only 0.000 apart, marking (T0310)P192.N as missing # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # copying to AlignedFragments data structure # naming current conformation karypis.srv.4_TS5 # ReadConformPDB reading from PDB file servers/karypis.srv_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS1 # ReadConformPDB reading from PDB file servers/karypis.srv_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation karypis.srv_TS2 # ReadConformPDB reading from PDB file servers/keasar-server_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation keasar-server_TS1 # ReadConformPDB reading from PDB file servers/keasar-server_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation keasar-server_TS2 # ReadConformPDB reading from PDB file servers/keasar-server_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation keasar-server_TS3 # ReadConformPDB reading from PDB file servers/keasar-server_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation keasar-server_TS4 # ReadConformPDB reading from PDB file servers/keasar-server_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation keasar-server_TS5 # ReadConformPDB reading from PDB file servers/mGen-3D_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation mGen-3D_TS1 # ReadConformPDB reading from PDB file servers/nFOLD_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation nFOLD_TS1 # ReadConformPDB reading from PDB file servers/nFOLD_TS2.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation nFOLD_TS2 # ReadConformPDB reading from PDB file servers/nFOLD_TS3.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation nFOLD_TS3 # ReadConformPDB reading from PDB file servers/nFOLD_TS4.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation nFOLD_TS4 # ReadConformPDB reading from PDB file servers/nFOLD_TS5.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation nFOLD_TS5 # ReadConformPDB reading from PDB file servers/panther2_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation panther2_TS1 # ReadConformPDB reading from PDB file servers/shub_TS1.pdb.gz looking for model 1 # WARNING: incomplete conformation T0310 can't currently be optimized by undertaker # naming current conformation shub_TS1 # command:Using radius: 8.0000 Metaserver mode NUMB_ALIGNS: 259 model score -0.1269 model score -0.1262 model score -0.1230 model score -0.1239 model score -0.1239 model score -0.1254 model score -0.1269 model score -0.1262 model score 0.0437 model score -0.0627 model score -0.1136 model score -0.1942 model score -0.1925 model score -0.2094 model score -0.2168 model score -0.2168 model score -0.1320 model score -0.1399 model score 0.1160 model score 0.1200 model score -0.2168 model score -0.1455 model score -0.1310 model score -0.2803 model score -0.2867 model score 0.1787 model score -0.1841 model score 0.1783 model score 1.9581 model score 1.8768 model score 1.8364 model score 1.9918 model score 2.0926 model score 0.0926 model score -0.2676 model score -0.2644 model score -0.2645 model score -0.2676 model score -0.2643 model score -0.2209 model score -0.2598 model score -0.2465 model score -0.1395 model score -0.1709 model score -0.1541 model score -0.0816 model score -0.2494 model score -0.1267 model score -0.3428 model score -0.2746 model score 1.2547 model score 1.2585 model score 1.2548 model score 1.2581 model score 1.2603 model score -0.2611 model score -0.2450 model score -0.2579 model score -0.2602 model score -0.2297 model score -0.2452 model score -0.2465 model score -0.2450 model score -0.2598 model score -0.2579 model score -0.3906 model score -0.3996 model score 0.1892 model score 0.2088 model score 0.1676 model score 1.2583 model score 1.2604 model score 1.2563 model score 1.2687 model score 1.2564 model score 1.2561 model score 1.2563 model score 1.2578 model score 1.2687 model score 1.2564 model score 2.4893 model score 2.5093 model score 2.4264 model score 2.6164 model score 2.2577 model score -0.2491 model score -0.1845 model score 0.6330 model score 1.2795 model score 1.1405 model score 1.2539 model score 1.2607 model score 1.2552 model score 1.2771 model score 1.2867 model score -0.2627 model score -0.2879 model score -0.2901 model score -0.2740 model score -0.1734 model score 0.0422 model score 0.1089 model score 0.1089 model score 0.1098 model score -0.2247 model score -0.0108 model score 0.8262 model score -0.0304 model score 0.9126 model score -0.2172 model score 0.1103 model score -0.0824 model score 0.0990 model score 0.2176 model score -0.2738 model score -0.0032 model score -0.2140 model score -0.1436 model score -0.1670 model score -0.2456 model score -0.2505 model score -0.2451 model score -0.2291 model score -0.2585 model score -0.2344 model score -0.2625 model score -0.2962 model score -0.2869 model score -0.2917 model score -0.2684 model score -0.2766 model score -0.2782 model score -0.2975 model score -0.2913 model score -0.2622 model score -0.3530 model score -0.3757 model score -0.3909 model score -0.3277 model score -0.3639 model score -0.0515 model score -0.3656 model score -0.3408 model score -0.3480 model score -0.3650 model score -0.3453 model score -0.2385 model score -0.2218 model score -0.2268 model score -0.2341 model score -0.2349 model score -0.3150 model score -0.3227 model score -0.3138 model score -0.3401 model score -0.3878 model score -0.1713 model score 0.0253 model score -0.0817 model score 0.2201 model score 0.1898 model score -0.1748 model score -0.0166 model score -0.1245 model score 0.1880 model score 0.1336 model score 0.1116 model score 0.0834 model score -0.0047 model score 0.0101 model score 0.0095 model score -0.2525 model score -0.3437 model score -0.3499 model score -0.3283 model score -0.3195 model score 1.2539 model score 1.2519 model score 1.2520 model score 1.2512 model score 1.2522 model score 1.2515 model score 1.2561 model score 1.2563 model score 1.2539 model score 1.2523 model score -0.1727 model score 0.1213 model score -0.3781 model score -0.4271 model score -0.3233 model score -0.2344 model score -0.3286 model score -0.3291 model score -0.3341 model score -0.3430 model score -0.2344 model score -0.3358 model score -0.3358 model score -0.3400 model score -0.3430 model score -0.1715 model score -0.3398 model score -0.3061 model score -0.3105 model score -0.3186 model score 1.2539 model score 1.2509 model score 1.2514 model score 1.2515 model score 1.2511 model score -0.2504 model score 1.2539 model score 1.2509 model score 1.2514 model score 1.2515 model score 1.2524 model score -0.2301 model score -0.2431 model score -0.2603 model score -0.0735 model score -0.1595 model score -0.3878 model score -0.2824 model score 1.2539 model score 1.2551 model score 1.2528 model score 1.2517 model score 1.2512 model score 1.2561 model score 1.2734 model score 1.2732 model score 1.2734 model score 1.2731 model score -0.2423 model score -0.4080 model score -0.4219 model score -0.4172 model score -0.4190 model score 2.5163 model score 2.2692 model score 2.3764 model score 2.4511 model score 2.1808 model score -0.1976 model score -0.2670 model score -0.2882 model score -0.3016 model score -0.2752 model score -0.2923 model score -0.2900 model score -0.1490 model score -0.1022 model score -0.3043 model score -0.1832 model score 0.1892 model score -0.1986 model score -0.2406 model score -0.2963 weight: 0.9112 eval: -0.1269 min: -0.4271 max: 2.6164 weight: 0.9110 eval: -0.1262 min: -0.4271 max: 2.6164 weight: 0.9101 eval: -0.1230 min: -0.4271 max: 2.6164 weight: 0.9103 eval: -0.1239 min: -0.4271 max: 2.6164 weight: 0.9103 eval: -0.1239 min: -0.4271 max: 2.6164 weight: 0.9108 eval: -0.1254 min: -0.4271 max: 2.6164 weight: 0.9112 eval: -0.1269 min: -0.4271 max: 2.6164 weight: 0.9110 eval: -0.1262 min: -0.4271 max: 2.6164 weight: 0.8608 eval: 0.0437 min: -0.4271 max: 2.6164 weight: 0.8922 eval: -0.0627 min: -0.4271 max: 2.6164 weight: 0.9073 eval: -0.1136 min: -0.4271 max: 2.6164 weight: 0.9311 eval: -0.1942 min: -0.4271 max: 2.6164 weight: 0.9306 eval: -0.1925 min: -0.4271 max: 2.6164 weight: 0.9356 eval: -0.2094 min: -0.4271 max: 2.6164 weight: 0.9378 eval: -0.2168 min: -0.4271 max: 2.6164 weight: 0.9378 eval: -0.2168 min: -0.4271 max: 2.6164 weight: 0.9127 eval: -0.1320 min: -0.4271 max: 2.6164 weight: 0.9151 eval: -0.1399 min: -0.4271 max: 2.6164 weight: 0.8394 eval: 0.1160 min: -0.4271 max: 2.6164 weight: 0.8382 eval: 0.1200 min: -0.4271 max: 2.6164 weight: 0.9378 eval: -0.2168 min: -0.4271 max: 2.6164 weight: 0.9167 eval: -0.1455 min: -0.4271 max: 2.6164 weight: 0.9124 eval: -0.1310 min: -0.4271 max: 2.6164 weight: 0.9566 eval: -0.2803 min: -0.4271 max: 2.6164 weight: 0.9585 eval: -0.2867 min: -0.4271 max: 2.6164 weight: 0.8208 eval: 0.1787 min: -0.4271 max: 2.6164 weight: 0.9281 eval: -0.1841 min: -0.4271 max: 2.6164 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0.5038 eval: 1.2509 min: -0.4271 max: 2.6164 weight: 0.5036 eval: 1.2514 min: -0.4271 max: 2.6164 weight: 0.5036 eval: 1.2515 min: -0.4271 max: 2.6164 weight: 0.5033 eval: 1.2524 min: -0.4271 max: 2.6164 weight: 0.9417 eval: -0.2301 min: -0.4271 max: 2.6164 weight: 0.9456 eval: -0.2431 min: -0.4271 max: 2.6164 weight: 0.9507 eval: -0.2603 min: -0.4271 max: 2.6164 weight: 0.8954 eval: -0.0735 min: -0.4271 max: 2.6164 weight: 0.9209 eval: -0.1595 min: -0.4271 max: 2.6164 weight: 0.9884 eval: -0.3878 min: -0.4271 max: 2.6164 weight: 0.9572 eval: -0.2824 min: -0.4271 max: 2.6164 weight: 0.5029 eval: 1.2539 min: -0.4271 max: 2.6164 weight: 0.5025 eval: 1.2551 min: -0.4271 max: 2.6164 weight: 0.5032 eval: 1.2528 min: -0.4271 max: 2.6164 weight: 0.5035 eval: 1.2517 min: -0.4271 max: 2.6164 weight: 0.5037 eval: 1.2512 min: -0.4271 max: 2.6164 weight: 0.5022 eval: 1.2561 min: -0.4271 max: 2.6164 weight: 0.4971 eval: 1.2734 min: -0.4271 max: 2.6164 weight: 0.4972 eval: 1.2732 min: -0.4271 max: 2.6164 weight: 0.4971 eval: 1.2734 min: -0.4271 max: 2.6164 weight: 0.4972 eval: 1.2731 min: -0.4271 max: 2.6164 weight: 0.9453 eval: -0.2423 min: -0.4271 max: 2.6164 weight: 0.9943 eval: -0.4080 min: -0.4271 max: 2.6164 weight: 0.9985 eval: -0.4219 min: -0.4271 max: 2.6164 weight: 0.9971 eval: -0.4172 min: -0.4271 max: 2.6164 weight: 0.9976 eval: -0.4190 min: -0.4271 max: 2.6164 weight: 0.1296 eval: 2.5163 min: -0.4271 max: 2.6164 weight: 0.2027 eval: 2.2692 min: -0.4271 max: 2.6164 weight: 0.1710 eval: 2.3764 min: -0.4271 max: 2.6164 weight: 0.1489 eval: 2.4511 min: -0.4271 max: 2.6164 weight: 0.2288 eval: 2.1808 min: -0.4271 max: 2.6164 weight: 0.9321 eval: -0.1976 min: -0.4271 max: 2.6164 weight: 0.9526 eval: -0.2670 min: -0.4271 max: 2.6164 weight: 0.9589 eval: -0.2882 min: -0.4271 max: 2.6164 weight: 0.9629 eval: -0.3016 min: -0.4271 max: 2.6164 weight: 0.9551 eval: -0.2752 min: -0.4271 max: 2.6164 weight: 0.9601 eval: -0.2923 min: -0.4271 max: 2.6164 weight: 0.9595 eval: -0.2900 min: -0.4271 max: 2.6164 weight: 0.9177 eval: -0.1490 min: -0.4271 max: 2.6164 weight: 0.9039 eval: -0.1022 min: -0.4271 max: 2.6164 weight: 0.9637 eval: -0.3043 min: -0.4271 max: 2.6164 weight: 0.9279 eval: -0.1832 min: -0.4271 max: 2.6164 weight: 0.8178 eval: 0.1892 min: -0.4271 max: 2.6164 weight: 0.9324 eval: -0.1986 min: -0.4271 max: 2.6164 weight: 0.9448 eval: -0.2406 min: -0.4271 max: 2.6164 weight: 0.9613 eval: -0.2963 min: -0.4271 max: 2.6164 Adding 15208 constraints to all2.constraints Done adding distance constraints # command:Reading probabilities from probabilities.dat Reading constraints from ConstraintSet all2.constraints maxweight: 1.0000 Optimizing... Probability sum: -734.6723, CN propb: -734.6723 weights: 0.3900 constraints: 1326 # command:Found ConstraintSet # PrintContacts align.constraints_meta02 Number of constraints in align2.constraints 1326 # command:Found ConstraintSet # PrintContacts align_bonus.constraints_meta02 Number of constraints in align2.constraints.bonus 1326 # command:Found ConstraintSet # PrintContacts rejected.constraints_meta02 Number of constraints in rejected2.constraints 13882 # command:Found ConstraintSet # PrintContacts rejected_bonus.constraints_meta02 Number of constraints in rejected2.constraints.bonus 13882 # command:Found ConstraintSet # PrintContacts non_contacts.constraints_meta02 Number of constraints in noncontact2.constraints 0 # command:Found ConstraintSet # PrintContacts non_contacts_bonus.constraints_meta02 Number of constraints in noncontact2.constraints.bonus 0 # command:Found ConstraintSet # PrintContacts all.constraints_meta02 Number of constraints in all2.constraints 15208 # command: