# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/
# command:# reading dunbrack-2191.atoms
#
#computed average backbone with maximum peptide_sq_deviance = 0.002
# computed average trans backbone unit from 53157 examples
# computed average trans backbone unit before proline from 2010 examples
# computed average cis backbone unit from 97 examples
# trans (non-proline) backbone unit:
#	  CA= -2.2087 1.0126 -0.0030
#	   O= -0.1499 2.2440 0.0016
#	   C= -0.6889 1.1368 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4581 -0.0000 0.0000
# cis backbone unit:
#	  CA= -0.1436 2.4534 -0.0002
#	   O= -2.0284 0.9742 0.0015
#	   C= -0.8018 1.0771 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4668 0.0000 0.0000
# trans backbone unit before proline:
#	  CA= -2.2100 1.0631 -0.0014
#	   O= -0.1236 2.2458 0.0075
#	   C= -0.6872 1.1517 -0.0000
#	 N+1= 0.0000 0.0000 0.0000
#	CA+1= 1.4660 0.0000 0.0000


# After reading dunbrack-2191.atoms have 2191 chains in training database
#  Count of chains,residues,atoms: 2191,500310,3902258
#  493341 residues have no bad marker
#  3226 residues lack atoms needed to compute omega
#  1453 residues have cis peptide
#  number of each bad type:
#	NON_STANDARD_RESIDUE	4
#	HAS_OXT	1167
#	TOO_MANY_ATOMS	1
#	TOO_FEW_ATOMS	3052
#	HAS_UNKNOWN_ATOMS	9
#	HAS_DUPLICATE_ATOMS	0
#	CHAIN_BREAK_BEFORE	979
#	NON_PLANAR_PEPTIDE	888
#	BAD_PEPTIDE	2680
#  Note: may sum to more than number of residues, 
#    because one residue may have multiple problems
# command:# Reading rotamer library from dunbrack-2191.rot
# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/
# command:# ReadAtomType exp-pdb.types
Read AtomType exp-pdb with 49 types.
# command:# ReadClashTable exp-pdb-2191-2symm.clash
# Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2
# command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0294/
# command:# Making conformation for sequence T0294 numbered 1 through 328
Created new target T0294 from T0294.a2m
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0294/
# command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0294//projects/compbio/experiments/protein-predict/casp7/T0294/align.constraints_v3.costfcn or /projects/compbio/experiments/protein-predict/casp7/T0294//projects/compbio/experiments/protein-predict/casp7/T0294/align.constraints_v3.costfcn.gz for input
Trying /projects/compbio/experiments/protein-predict/casp7/T0294/align.constraints_v3.costfcn
# reading script from file /projects/compbio/experiments/protein-predict/casp7/T0294/align.constraints_v3.costfcn
# future Constraint commands -> align
# future HelixConstraint commands -> align
# future StrandConstraint commands -> align
# future SheetConstraint commands -> align
# future Hbond commands -> align
# future SSbond commands -> align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)A169.CB) [> 3.3448 = 5.5747 < 7.2471] w=1.0000 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)V177.CB) [> 2.8364 = 4.7274 < 6.1456] w=1.0000 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)L172.CB) [> 3.0254 = 5.0423 < 6.5550] w=1.0000 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)L181.CB) [> 3.1313 = 5.2189 < 6.7845] w=0.9917 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)Y182.CB) [> 3.5398 = 5.8997 < 7.6696] w=0.9832 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)F180.CB) [> 3.5111 = 5.8519 < 7.6074] w=0.9830 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)S209.CB) [> 3.9093 = 6.5155 < 8.4701] w=0.9750 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)F211.CB) [> 2.7425 = 4.5708 < 5.9420] w=0.9750 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)S209.CB) [> 2.7533 = 4.5888 < 5.9654] w=0.9750 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)F211.CB) [> 3.9338 = 6.5564 < 8.5233] w=0.9750 to align
# Constraint # added constraint: constraint((T0294)F211.CB, (T0294)V239.CB) [> 2.9882 = 4.9803 < 6.4744] w=0.9750 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)L181.CB) [> 3.9453 = 6.5755 < 8.5482] w=0.9748 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)F180.CB) [> 3.4501 = 5.7502 < 7.4752] w=0.9747 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)F180.CB) [> 4.0715 = 6.7858 < 8.8216] w=0.9745 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)I168.CB) [> 3.3793 = 5.6322 < 7.3219] w=0.9744 to align
# Constraint # added constraint: constraint((T0294)F211.CB, (T0294)A238.CB) [> 4.1231 = 6.8719 < 8.9335] w=0.9674 to align
# Constraint # added constraint: constraint((T0294)D210.CB, (T0294)A238.CB) [> 3.5522 = 5.9204 < 7.6965] w=0.9674 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)V213.CB) [> 2.9183 = 4.8638 < 6.3229] w=0.9674 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)V213.CB) [> 3.8621 = 6.4369 < 8.3680] w=0.9674 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)V213.CB) [> 4.0810 = 6.8017 < 8.8422] w=0.9674 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)Y182.CB) [> 4.1242 = 6.8736 < 8.9357] w=0.9671 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)I212.CB) [> 3.1572 = 5.2620 < 6.8405] w=0.9664 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)T183.CB) [> 3.5931 = 5.9885 < 7.7850] w=0.9662 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)R179.CB) [> 3.7919 = 6.3198 < 8.2157] w=0.9662 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)I241.CB) [> 4.2699 = 7.1165 < 9.2514] w=0.9599 to align
# Constraint # added constraint: constraint((T0294)V213.CB, (T0294)I241.CB) [> 3.0377 = 5.0627 < 6.5816] w=0.9599 to align
# Constraint # added constraint: constraint((T0294)D210.CB, (T0294)V239.CB) [> 4.0876 = 6.8127 < 8.8565] w=0.9599 to align
# Constraint # added constraint: constraint((T0294)V213.CB, (T0294)I243.CB) [> 4.0282 = 6.7137 < 8.7278] w=0.9589 to align
# Constraint # added constraint: constraint((T0294)I168.CB, (T0294)V213.CB) [> 3.4863 = 5.8106 < 7.5537] w=0.9589 to align
# Constraint # added constraint: constraint((T0294)S209.CB, (T0294)A238.CB) [> 3.9204 = 6.5341 < 8.4943] w=0.9523 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)F240.CB) [> 3.1026 = 5.1709 < 6.7222] w=0.9513 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)I241.CB) [> 4.2239 = 7.0399 < 9.1518] w=0.9513 to align
# Constraint # added constraint: constraint((T0294)A206.CB, (T0294)M234.CB) [> 3.3615 = 5.6026 < 7.2833] w=0.9495 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)D210.CB) [> 4.1676 = 6.9460 < 9.0298] w=0.9494 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)V214.CB) [> 3.1834 = 5.3056 < 6.8973] w=0.9494 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)A238.CB) [> 3.9608 = 6.6013 < 8.5817] w=0.9347 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)I243.CB) [> 3.9483 = 6.5806 < 8.5548] w=0.9334 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)Y182.CB) [> 4.0389 = 6.7316 < 8.7510] w=0.9322 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)S244.CB) [> 3.4592 = 5.7654 < 7.4950] w=0.9249 to align
# Constraint # added constraint: constraint((T0294)I164.CB, (T0294)A215.CB) [> 2.8281 = 4.7135 < 6.1275] w=0.9248 to align
# Constraint # added constraint: constraint((T0294)G165.CA, (T0294)A215.CB) [> 2.5570 = 4.2617 < 5.5402] w=0.9248 to align
# Constraint # added constraint: constraint((T0294)T155.CB, (T0294)D210.CB) [> 3.1193 = 5.1988 < 6.7584] w=0.9239 to align
# Constraint # added constraint: constraint((T0294)T155.CB, (T0294)S209.CB) [> 3.0547 = 5.0912 < 6.6186] w=0.9239 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)C216.CB) [> 3.0010 = 5.0017 < 6.5022] w=0.9162 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)C216.CB) [> 3.4799 = 5.7998 < 7.5398] w=0.9162 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)A215.CB) [> 3.9412 = 6.5687 < 8.5393] w=0.9153 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)N242.CB) [> 2.8597 = 4.7662 < 6.1961] w=0.9138 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)V239.CB) [> 4.3237 = 7.2062 < 9.3681] w=0.9129 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)A215.CB) [> 2.9057 = 4.8428 < 6.2956] w=0.9078 to align
# Constraint # added constraint: constraint((T0294)A206.CB, (T0294)F230.CB) [> 3.2006 = 5.3344 < 6.9347] w=0.8998 to align
# Constraint # added constraint: constraint((T0294)T155.CB, (T0294)F211.CB) [> 4.4056 = 7.3427 < 9.5455] w=0.8996 to align
# Constraint # added constraint: constraint((T0294)G162.CA, (T0294)A215.CB) [> 4.0459 = 6.7432 < 8.7661] w=0.8908 to align
# Constraint # added constraint: constraint((T0294)F211.CB, (T0294)I241.CB) [> 4.3275 = 7.2126 < 9.3763] w=0.8907 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)M234.CB) [> 4.3036 = 7.1727 < 9.3245] w=0.8899 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)I212.CB) [> 4.2623 = 7.1038 < 9.2350] w=0.8898 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)I212.CB) [> 4.5547 = 7.5912 < 9.8685] w=0.8872 to align
# Constraint # added constraint: constraint((T0294)T155.CB, (T0294)R179.CB) [> 3.4167 = 5.6945 < 7.4028] w=0.8835 to align
# Constraint # added constraint: constraint((T0294)G165.CA, (T0294)V213.CB) [> 4.4715 = 7.4525 < 9.6882] w=0.8822 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)T183.CB) [> 3.2367 = 5.3944 < 7.0128] w=0.8817 to align
# Constraint # added constraint: constraint((T0294)S154.CB, (T0294)V177.CB) [> 3.2086 = 5.3477 < 6.9521] w=0.8792 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)A215.CB) [> 3.6992 = 6.1652 < 8.0148] w=0.8758 to align
# Constraint # added constraint: constraint((T0294)I168.CB, (T0294)A215.CB) [> 3.8468 = 6.4114 < 8.3348] w=0.8751 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)G184.CA) [> 3.4248 = 5.7080 < 7.4204] w=0.8734 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)Y182.CB) [> 3.5540 = 5.9233 < 7.7003] w=0.8733 to align
# Constraint # added constraint: constraint((T0294)A215.CB, (T0294)I243.CB) [> 3.5763 = 5.9605 < 7.7486] w=0.8654 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)V213.CB) [> 4.3303 = 7.2171 < 9.3823] w=0.8652 to align
# Constraint # added constraint: constraint((T0294)S154.CB, (T0294)F211.CB) [> 3.5688 = 5.9480 < 7.7324] w=0.8625 to align
# Constraint # added constraint: constraint((T0294)S154.CB, (T0294)D210.CB) [> 2.5271 = 4.2118 < 5.4753] w=0.8625 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)L205.CB) [> 3.5144 = 5.8573 < 7.6146] w=0.8599 to align
# Constraint # added constraint: constraint((T0294)T155.CB, (T0294)V177.CB) [> 4.2099 = 7.0165 < 9.1214] w=0.8572 to align
# Constraint # added constraint: constraint((T0294)Y182.CB, (T0294)F199.CB) [> 3.5375 = 5.8958 < 7.6646] w=0.8557 to align
# Constraint # added constraint: constraint((T0294)T155.CB, (T0294)Q208.CB) [> 3.5009 = 5.8348 < 7.5853] w=0.8552 to align
# Constraint # added constraint: constraint((T0294)A215.CB, (T0294)S244.CB) [> 3.4384 = 5.7306 < 7.4498] w=0.8455 to align
# Constraint # added constraint: constraint((T0294)A207.CB, (T0294)K233.CB) [> 3.2264 = 5.3774 < 6.9906] w=0.8372 to align
# Constraint # added constraint: constraint((T0294)L181.CB, (T0294)E198.CB) [> 3.4717 = 5.7861 < 7.5220] w=0.8338 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)V214.CB) [> 4.4970 = 7.4950 < 9.7435] w=0.8283 to align
# Constraint # added constraint: constraint((T0294)D210.CB, (T0294)K235.CB) [> 3.8455 = 6.4091 < 8.3319] w=0.8221 to align
# Constraint # added constraint: constraint((T0294)T155.CB, (T0294)F180.CB) [> 4.3619 = 7.2698 < 9.4508] w=0.8103 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)T202.CB) [> 3.9490 = 6.5817 < 8.5562] w=0.8003 to align
# Constraint # added constraint: constraint((T0294)F180.CB, (T0294)A197.CB) [> 3.2185 = 5.3641 < 6.9733] w=0.7971 to align
# Constraint # added constraint: constraint((T0294)S209.CB, (T0294)K235.CB) [> 4.1615 = 6.9358 < 9.0166] w=0.7969 to align
# Constraint # added constraint: constraint((T0294)L181.CB, (T0294)A197.CB) [> 3.8281 = 6.3801 < 8.2941] w=0.7957 to align
# Constraint # added constraint: constraint((T0294)V116.CB, (T0294)R171.CB) [> 3.2411 = 5.4019 < 7.0224] w=0.7943 to align
# Constraint # added constraint: constraint((T0294)C216.CB, (T0294)S244.CB) [> 3.5009 = 5.8348 < 7.5852] w=0.7857 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)T183.CB) [> 3.7538 = 6.2564 < 8.1333] w=0.7813 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)Y182.CB) [> 3.6844 = 6.1407 < 7.9829] w=0.7707 to align
# Constraint # added constraint: constraint((T0294)L151.CB, (T0294)F175.CB) [> 2.8890 = 4.8150 < 6.2595] w=0.7667 to align
# Constraint # added constraint: constraint((T0294)L151.CB, (T0294)V177.CB) [> 3.2897 = 5.4829 < 7.1277] w=0.7667 to align
# Constraint # added constraint: constraint((T0294)T152.CB, (T0294)V177.CB) [> 3.6456 = 6.0759 < 7.8987] w=0.7667 to align
# Constraint # added constraint: constraint((T0294)Y182.CB, (T0294)V200.CB) [> 4.0311 = 6.7185 < 8.7341] w=0.7629 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)L225.CB) [> 3.8387 = 6.3978 < 8.3172] w=0.7531 to align
# Constraint # added constraint: constraint((T0294)A207.CB, (T0294)M234.CB) [> 4.3061 = 7.1768 < 9.3299] w=0.7526 to align
# Constraint # added constraint: constraint((T0294)T152.CB, (T0294)G176.CA) [> 2.3790 = 3.9650 < 5.1545] w=0.7523 to align
# Constraint # added constraint: constraint((T0294)F180.CB, (T0294)E198.CB) [> 4.0260 = 6.7099 < 8.7229] w=0.7455 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)I212.CB) [> 4.5330 = 7.5550 < 9.8214] w=0.7401 to align
# Constraint # added constraint: constraint((T0294)S209.CB, (T0294)M234.CB) [> 4.1539 = 6.9232 < 9.0001] w=0.7352 to align
# Constraint # added constraint: constraint((T0294)L181.CB, (T0294)L205.CB) [> 3.4746 = 5.7910 < 7.5283] w=0.7300 to align
# Constraint # added constraint: constraint((T0294)A112.CB, (T0294)A167.CB) [> 2.7339 = 4.5564 < 5.9233] w=0.7295 to align
# Constraint # added constraint: constraint((T0294)L181.CB, (T0294)F199.CB) [> 4.0286 = 6.7144 < 8.7287] w=0.7218 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)I243.CB) [> 3.3618 = 5.6030 < 7.2839] w=0.7208 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)L172.CB) [> 4.3721 = 7.2868 < 9.4729] w=0.7197 to align
# Constraint # added constraint: constraint((T0294)T183.CB, (T0294)F199.CB) [> 4.0703 = 6.7838 < 8.8190] w=0.7173 to align
# Constraint # added constraint: constraint((T0294)L151.CB, (T0294)G176.CA) [> 3.9336 = 6.5561 < 8.5229] w=0.7155 to align
# Constraint # added constraint: constraint((T0294)V116.CB, (T0294)I168.CB) [> 3.6560 = 6.0934 < 7.9214] w=0.7150 to align
# Constraint # added constraint: constraint((T0294)C216.CB, (T0294)L225.CB) [> 3.7392 = 6.2320 < 8.1016] w=0.7106 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)A215.CB) [> 4.5593 = 7.5988 < 9.8784] w=0.7081 to align
# Constraint # added constraint: constraint((T0294)L181.CB, (T0294)V200.CB) [> 3.6542 = 6.0903 < 7.9174] w=0.7081 to align
# Constraint # added constraint: constraint((T0294)L119.CB, (T0294)I241.CB) [> 3.4946 = 5.8244 < 7.5718] w=0.7077 to align
# Constraint # added constraint: constraint((T0294)A169.CB, (T0294)A197.CB) [> 3.5043 = 5.8405 < 7.5926] w=0.7060 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)L225.CB) [> 3.7224 = 6.2040 < 8.0652] w=0.7015 to align
# Constraint # added constraint: constraint((T0294)C226.CB, (T0294)V249.CB) [> 2.6297 = 4.3829 < 5.6978] w=0.6958 to align
# Constraint # added constraint: constraint((T0294)T202.CB, (T0294)F230.CB) [> 4.0973 = 6.8288 < 8.8774] w=0.6873 to align
# Constraint # added constraint: constraint((T0294)A112.CB, (T0294)I164.CB) [> 3.2941 = 5.4902 < 7.1372] w=0.6867 to align
# Constraint # added constraint: constraint((T0294)C123.CB, (T0294)V239.CB) [> 3.8495 = 6.4159 < 8.3407] w=0.6823 to align
# Constraint # added constraint: constraint((T0294)F211.CB, (T0294)F240.CB) [> 4.4612 = 7.4354 < 9.6660] w=0.6796 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)G184.CA) [> 3.3453 = 5.5755 < 7.2481] w=0.6750 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)T183.CB) [> 4.4717 = 7.4529 < 9.6888] w=0.6686 to align
# Constraint # added constraint: constraint((T0294)I164.CB, (T0294)I243.CB) [> 3.7737 = 6.2895 < 8.1764] w=0.6682 to align
# Constraint # added constraint: constraint((T0294)V213.CB, (T0294)N242.CB) [> 4.3529 = 7.2548 < 9.4313] w=0.6669 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)L181.CB) [> 4.1795 = 6.9658 < 9.0555] w=0.6667 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)G184.CA) [> 3.9640 = 6.6067 < 8.5887] w=0.6586 to align
# Constraint # added constraint: constraint((T0294)A169.CB, (T0294)F180.CB) [> 3.1639 = 5.2732 < 6.8552] w=0.6496 to align
# Constraint # added constraint: constraint((T0294)L119.CB, (T0294)V213.CB) [> 3.9172 = 6.5287 < 8.4874] w=0.6454 to align
# Constraint # added constraint: constraint((T0294)A169.CB, (T0294)Y182.CB) [> 3.7824 = 6.3039 < 8.1951] w=0.6411 to align
# Constraint # added constraint: constraint((T0294)I78.CB, (T0294)V100.CB) [> 3.2207 = 5.3678 < 6.9781] w=0.6373 to align
# Constraint # added constraint: constraint((T0294)Y182.CB, (T0294)E198.CB) [> 4.2137 = 7.0228 < 9.1297] w=0.6361 to align
# Constraint # added constraint: constraint((T0294)T152.CB, (T0294)F175.CB) [> 3.3282 = 5.5471 < 7.2112] w=0.6355 to align
# Constraint # added constraint: constraint((T0294)L181.CB, (T0294)S209.CB) [> 3.8858 = 6.4763 < 8.4192] w=0.6332 to align
# Constraint # added constraint: constraint((T0294)T155.CB, (T0294)L181.CB) [> 3.8614 = 6.4356 < 8.3663] w=0.6326 to align
# Constraint # added constraint: constraint((T0294)T183.CB, (T0294)T202.CB) [> 3.3045 = 5.5075 < 7.1598] w=0.6318 to align
# Constraint # added constraint: constraint((T0294)V77.CB, (T0294)R99.CB) [> 3.3409 = 5.5681 < 7.2385] w=0.6288 to align
# Constraint # added constraint: constraint((T0294)S79.CB, (T0294)G101.CA) [> 3.4855 = 5.8092 < 7.5519] w=0.6288 to align
# Constraint # added constraint: constraint((T0294)T80.CB, (T0294)Y102.CB) [> 3.2357 = 5.3928 < 7.0106] w=0.6288 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)F240.CB) [> 4.3876 = 7.3126 < 9.5064] w=0.6259 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)I168.CB) [> 3.2860 = 5.4767 < 7.1197] w=0.6251 to align
# Constraint # added constraint: constraint((T0294)C123.CB, (T0294)F211.CB) [> 4.0764 = 6.7940 < 8.8322] w=0.6224 to align
# Constraint # added constraint: constraint((T0294)I78.CB, (T0294)G101.CA) [> 3.9406 = 6.5677 < 8.5380] w=0.6203 to align
# Constraint # added constraint: constraint((T0294)G224.CA, (T0294)V248.CB) [> 3.7392 = 6.2320 < 8.1016] w=0.6109 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)I241.CB) [> 4.2173 = 7.0288 < 9.1374] w=0.6061 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)L254.CB) [> 3.9808 = 6.6347 < 8.6251] w=0.6057 to align
# Constraint # added constraint: constraint((T0294)K76.CB, (T0294)I98.CB) [> 3.9396 = 6.5660 < 8.5358] w=0.6033 to align
# Constraint # added constraint: constraint((T0294)V77.CB, (T0294)I98.CB) [> 3.8225 = 6.3708 < 8.2820] w=0.6033 to align
# Constraint # added constraint: constraint((T0294)K228.CB, (T0294)N250.CB) [> 4.0093 = 6.6822 < 8.6869] w=0.6032 to align
# Constraint # added constraint: constraint((T0294)Q208.CB, (T0294)K235.CB) [> 4.2592 = 7.0986 < 9.2282] w=0.6030 to align
# Constraint # added constraint: constraint((T0294)G224.CA, (T0294)V249.CB) [> 3.9311 = 6.5518 < 8.5173] w=0.6023 to align
# Constraint # added constraint: constraint((T0294)A169.CB, (T0294)F195.CB) [> 3.6155 = 6.0259 < 7.8337] w=0.6022 to align
# Constraint # added constraint: constraint((T0294)N227.CB, (T0294)N250.CB) [> 2.9687 = 4.9478 < 6.4321] w=0.6004 to align
# Constraint # added constraint: constraint((T0294)A112.CB, (T0294)R171.CB) [> 3.4792 = 5.7987 < 7.5384] w=0.5997 to align
# Constraint # added constraint: constraint((T0294)C123.CB, (T0294)Y149.CB) [> 3.1583 = 5.2637 < 6.8429] w=0.5984 to align
# Constraint # added constraint: constraint((T0294)C226.CB, (T0294)N250.CB) [> 3.7636 = 6.2726 < 8.1544] w=0.5948 to align
# Constraint # added constraint: constraint((T0294)L225.CB, (T0294)V249.CB) [> 4.4021 = 7.3369 < 9.5380] w=0.5947 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)I164.CB) [> 3.9205 = 6.5342 < 8.4945] w=0.5919 to align
# Constraint # added constraint: constraint((T0294)L151.CB, (T0294)L172.CB) [> 4.1370 = 6.8949 < 8.9634] w=0.5895 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)V248.CB) [> 3.1648 = 5.2746 < 6.8570] w=0.5887 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)V249.CB) [> 4.1243 = 6.8738 < 8.9360] w=0.5874 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)L205.CB) [> 4.0227 = 6.7044 < 8.7158] w=0.5864 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)D253.CB) [> 3.6826 = 6.1377 < 7.9790] w=0.5862 to align
# Constraint # added constraint: constraint((T0294)A112.CB, (T0294)I168.CB) [> 2.9303 = 4.8838 < 6.3490] w=0.5854 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)T183.CB) [> 4.3917 = 7.3195 < 9.5154] w=0.5834 to align
# Constraint # added constraint: constraint((T0294)E113.CB, (T0294)R171.CB) [> 4.2458 = 7.0763 < 9.1992] w=0.5825 to align
# Constraint # added constraint: constraint((T0294)C123.CB, (T0294)L151.CB) [> 3.5939 = 5.9898 < 7.7867] w=0.5815 to align
# Constraint # added constraint: constraint((T0294)R124.CB, (T0294)G148.CA) [> 3.5243 = 5.8739 < 7.6360] w=0.5794 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)V249.CB) [> 4.1251 = 6.8752 < 8.9377] w=0.5769 to align
# Constraint # added constraint: constraint((T0294)S217.CB, (T0294)S244.CB) [> 3.9059 = 6.5099 < 8.4629] w=0.5710 to align
# Constraint # added constraint: constraint((T0294)T80.CB, (T0294)T103.CB) [> 3.9490 = 6.5816 < 8.5561] w=0.5699 to align
# Constraint # added constraint: constraint((T0294)P203.CB, (T0294)F230.CB) [> 3.8311 = 6.3852 < 8.3008] w=0.5694 to align
# Constraint # added constraint: constraint((T0294)V77.CB, (T0294)V100.CB) [> 4.1013 = 6.8356 < 8.8862] w=0.5692 to align
# Constraint # added constraint: constraint((T0294)L75.CB, (T0294)I98.CB) [> 3.4060 = 5.6768 < 7.3798] w=0.5692 to align
# Constraint # added constraint: constraint((T0294)T183.CB, (T0294)V200.CB) [> 3.3340 = 5.5567 < 7.2237] w=0.5676 to align
# Constraint # added constraint: constraint((T0294)C123.CB, (T0294)G148.CA) [> 3.9174 = 6.5291 < 8.4878] w=0.5643 to align
# Constraint # added constraint: constraint((T0294)L119.CB, (T0294)F211.CB) [> 3.6568 = 6.0947 < 7.9231] w=0.5626 to align
# Constraint # added constraint: constraint((T0294)V116.CB, (T0294)L172.CB) [> 4.1511 = 6.9184 < 8.9939] w=0.5596 to align
# Constraint # added constraint: constraint((T0294)T111.CB, (T0294)I164.CB) [> 2.9620 = 4.9367 < 6.4177] w=0.5554 to align
# Constraint # added constraint: constraint((T0294)V239.CB, (T0294)A264.CB) [> 3.4618 = 5.7697 < 7.5006] w=0.5518 to align
# Constraint # added constraint: constraint((T0294)Y182.CB, (T0294)A197.CB) [> 3.0295 = 5.0492 < 6.5640] w=0.5508 to align
# Constraint # added constraint: constraint((T0294)N227.CB, (T0294)D253.CB) [> 3.5206 = 5.8676 < 7.6279] w=0.5508 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)I263.CB) [> 3.5642 = 5.9403 < 7.7224] w=0.5465 to align
# Constraint # added constraint: constraint((T0294)L120.CB, (T0294)L151.CB) [> 3.9468 = 6.5779 < 8.5513] w=0.5456 to align
# Constraint # added constraint: constraint((T0294)I78.CB, (T0294)I98.CB) [> 3.6556 = 6.0927 < 7.9205] w=0.5444 to align
# Constraint # added constraint: constraint((T0294)S154.CB, (T0294)R179.CB) [> 4.2960 = 7.1600 < 9.3080] w=0.5406 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)V213.CB) [> 3.5053 = 5.8422 < 7.5949] w=0.5370 to align
# Constraint # added constraint: constraint((T0294)V239.CB, (T0294)I263.CB) [> 4.1724 = 6.9540 < 9.0402] w=0.5361 to align
# Constraint # added constraint: constraint((T0294)C123.CB, (T0294)G150.CA) [> 3.6722 = 6.1203 < 7.9563] w=0.5302 to align
# Constraint # added constraint: constraint((T0294)T108.CB, (T0294)R163.CB) [> 2.7787 = 4.6312 < 6.0206] w=0.5297 to align
# Constraint # added constraint: constraint((T0294)L225.CB, (T0294)V248.CB) [> 3.2663 = 5.4439 < 7.0770] w=0.5297 to align
# Constraint # added constraint: constraint((T0294)M81.CB, (T0294)T103.CB) [> 3.7519 = 6.2532 < 8.1292] w=0.5281 to align
# Constraint # added constraint: constraint((T0294)S79.CB, (T0294)V100.CB) [> 4.4030 = 7.3384 < 9.5399] w=0.5267 to align
# Constraint # added constraint: constraint((T0294)A238.CB, (T0294)I263.CB) [> 3.4593 = 5.7654 < 7.4950] w=0.5187 to align
# Constraint # added constraint: constraint((T0294)L118.CB, (T0294)I241.CB) [> 3.3685 = 5.6142 < 7.2984] w=0.5175 to align
# Constraint # added constraint: constraint((T0294)A238.CB, (T0294)A264.CB) [> 3.8596 = 6.4327 < 8.3624] w=0.5161 to align
# Constraint # added constraint: constraint((T0294)L218.CB, (T0294)S244.CB) [> 3.9299 = 6.5499 < 8.5149] w=0.5159 to align
# Constraint # added constraint: constraint((T0294)E223.CB, (T0294)V248.CB) [> 3.9801 = 6.6335 < 8.6235] w=0.5090 to align
# Constraint # added constraint: constraint((T0294)T108.CB, (T0294)I164.CB) [> 3.2377 = 5.3961 < 7.0150] w=0.5088 to align
# Constraint # added constraint: constraint((T0294)T80.CB, (T0294)G101.CA) [> 3.6776 = 6.1294 < 7.9682] w=0.5018 to align
# Constraint # added constraint: constraint((T0294)T80.CB, (T0294)V100.CB) [> 4.0589 = 6.7648 < 8.7942] w=0.5018 to align
# Constraint # added constraint: constraint((T0294)I78.CB, (T0294)R99.CB) [> 4.3307 = 7.2179 < 9.3833] w=0.5018 to align
# Constraint # added constraint: constraint((T0294)C57.CB, (T0294)S79.CB) [> 3.9577 = 6.5962 < 8.5751] w=0.5018 to align
# Constraint # added constraint: constraint((T0294)V83.CB, (T0294)Y102.CB) [> 3.6156 = 6.0261 < 7.8339] w=0.5011 to align
# Constraint # added constraint: constraint((T0294)A112.CB, (T0294)G165.CA) [> 4.1113 = 6.8522 < 8.9079] w=0.4965 to align
# Constraint # added constraint: constraint((T0294)T103.CB, (T0294)M305.CB) [> 3.2713 = 5.4521 < 7.0877] w=0.4960 to align
# Constraint # added constraint: constraint((T0294)L218.CB, (T0294)V248.CB) [> 3.7238 = 6.2064 < 8.0683] w=0.4957 to align
# Constraint # added constraint: constraint((T0294)T111.CB, (T0294)I243.CB) [> 3.4971 = 5.8285 < 7.5770] w=0.4927 to align
# Constraint # added constraint: constraint((T0294)L119.CB, (T0294)V239.CB) [> 3.9727 = 6.6211 < 8.6074] w=0.4920 to align
# Constraint # added constraint: constraint((T0294)T103.CB, (T0294)A309.CB) [> 3.3861 = 5.6436 < 7.3366] w=0.4876 to align
# Constraint # added constraint: constraint((T0294)V77.CB, (T0294)G101.CA) [> 4.2850 = 7.1416 < 9.2841] w=0.4845 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)L254.CB) [> 4.0700 = 6.7833 < 8.8183] w=0.4842 to align
# Constraint # added constraint: constraint((T0294)V239.CB, (T0294)A265.CB) [> 3.1656 = 5.2761 < 6.8589] w=0.4833 to align
# Constraint # added constraint: constraint((T0294)T103.CB, (T0294)L308.CB) [> 2.8272 = 4.7120 < 6.1255] w=0.4798 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)A266.CB) [> 3.1262 = 5.2104 < 6.7735] w=0.4775 to align
# Constraint # added constraint: constraint((T0294)L55.CB, (T0294)L75.CB) [> 3.8463 = 6.4104 < 8.3335] w=0.4769 to align
# Constraint # added constraint: constraint((T0294)K173.CB, (T0294)A197.CB) [> 4.2727 = 7.1212 < 9.2576] w=0.4765 to align
# Constraint # added constraint: constraint((T0294)R170.CB, (T0294)F195.CB) [> 3.7797 = 6.2996 < 8.1894] w=0.4763 to align
# Constraint # added constraint: constraint((T0294)R124.CB, (T0294)Y149.CB) [> 4.3047 = 7.1746 < 9.3270] w=0.4706 to align
# Constraint # added constraint: constraint((T0294)K173.CB, (T0294)F195.CB) [> 3.5710 = 5.9516 < 7.7371] w=0.4698 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)S79.CB) [> 3.5153 = 5.8588 < 7.6165] w=0.4684 to align
# Constraint # added constraint: constraint((T0294)L90.CB, (T0294)V100.CB) [> 3.8558 = 6.4263 < 8.3542] w=0.4645 to align
# Constraint # added constraint: constraint((T0294)L120.CB, (T0294)F175.CB) [> 4.2786 = 7.1310 < 9.2703] w=0.4632 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)A266.CB) [> 4.3260 = 7.2099 < 9.3729] w=0.4609 to align
# Constraint # added constraint: constraint((T0294)H53.CB, (T0294)L75.CB) [> 3.8868 = 6.4781 < 8.4215] w=0.4599 to align
# Constraint # added constraint: constraint((T0294)T110.CB, (T0294)T301.CB) [> 3.0352 = 5.0586 < 6.5762] w=0.4593 to align
# Constraint # added constraint: constraint((T0294)S82.CB, (T0294)Y102.CB) [> 4.1076 = 6.8460 < 8.8997] w=0.4592 to align
# Constraint # added constraint: constraint((T0294)C216.CB, (T0294)V248.CB) [> 3.6976 = 6.1626 < 8.0114] w=0.4590 to align
# Constraint # added constraint: constraint((T0294)S79.CB, (T0294)Y102.CB) [> 4.4746 = 7.4577 < 9.6950] w=0.4585 to align
# Constraint # added constraint: constraint((T0294)T237.CB, (T0294)A264.CB) [> 2.7635 = 4.6058 < 5.9876] w=0.4581 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)I241.CB) [> 3.5366 = 5.8944 < 7.6627] w=0.4552 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)A169.CB) [> 4.6041 = 7.6735 < 9.9756] w=0.4545 to align
# Constraint # added constraint: constraint((T0294)M234.CB, (T0294)I263.CB) [> 4.0206 = 6.7010 < 8.7113] w=0.4539 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)A265.CB) [> 4.3326 = 7.2210 < 9.3872] w=0.4527 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)I263.CB) [> 4.0839 = 6.8065 < 8.8484] w=0.4521 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)A257.CB) [> 2.9238 = 4.8730 < 6.3349] w=0.4518 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)A265.CB) [> 2.6995 = 4.4991 < 5.8489] w=0.4514 to align
# Constraint # added constraint: constraint((T0294)T222.CB, (T0294)V248.CB) [> 3.5753 = 5.9588 < 7.7465] w=0.4510 to align
# Constraint # added constraint: constraint((T0294)C57.CB, (T0294)I78.CB) [> 4.0347 = 6.7245 < 8.7418] w=0.4507 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)V31.CB) [> 3.1424 = 5.2373 < 6.8085] w=0.4507 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)F240.CB) [> 4.3885 = 7.3142 < 9.5084] w=0.4500 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)G267.CA) [> 4.0165 = 6.6942 < 8.7025] w=0.4496 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)G267.CA) [> 3.0859 = 5.1432 < 6.6861] w=0.4496 to align
# Constraint # added constraint: constraint((T0294)T202.CB, (T0294)L225.CB) [> 3.9878 = 6.6463 < 8.6402] w=0.4493 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)V239.CB) [> 3.0787 = 5.1312 < 6.6706] w=0.4484 to align
# Constraint # added constraint: constraint((T0294)C226.CB, (T0294)L254.CB) [> 4.1614 = 6.9357 < 9.0164] w=0.4450 to align
# Constraint # added constraint: constraint((T0294)L55.CB, (T0294)S79.CB) [> 4.2429 = 7.0715 < 9.1930] w=0.4422 to align
# Constraint # added constraint: constraint((T0294)L114.CB, (T0294)I294.CB) [> 3.8838 = 6.4730 < 8.4149] w=0.4422 to align
# Constraint # added constraint: constraint((T0294)S217.CB, (T0294)R245.CB) [> 4.2179 = 7.0299 < 9.1388] w=0.4409 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)G267.CA) [> 4.1262 = 6.8771 < 8.9402] w=0.4408 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)L268.CB) [> 3.0793 = 5.1322 < 6.6719] w=0.4406 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)V214.CB) [> 4.4873 = 7.4789 < 9.7226] w=0.4398 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)A192.CB) [> 3.3660 = 5.6100 < 7.2930] w=0.4387 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)E32.CB) [> 4.2588 = 7.0979 < 9.2273] w=0.4336 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)E32.CB) [> 3.2821 = 5.4702 < 7.1112] w=0.4334 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)D269.CB) [> 2.9379 = 4.8965 < 6.3654] w=0.4323 to align
# Constraint # added constraint: constraint((T0294)L88.CB, (T0294)V100.CB) [> 3.8150 = 6.3584 < 8.2659] w=0.4317 to align
# Constraint # added constraint: constraint((T0294)E236.CB, (T0294)K262.CB) [> 3.4152 = 5.6921 < 7.3997] w=0.4314 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)Q33.CB) [> 2.9878 = 4.9797 < 6.4736] w=0.4304 to align
# Constraint # added constraint: constraint((T0294)K65.CB, (T0294)E92.CB) [> 3.3906 = 5.6510 < 7.3463] w=0.4304 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)E32.CB) [> 4.2817 = 7.1362 < 9.2771] w=0.4297 to align
# Constraint # added constraint: constraint((T0294)I164.CB, (T0294)S244.CB) [> 3.9831 = 6.6385 < 8.6300] w=0.4278 to align
# Constraint # added constraint: constraint((T0294)L218.CB, (T0294)G246.CA) [> 4.1183 = 6.8638 < 8.9229] w=0.4267 to align
# Constraint # added constraint: constraint((T0294)L118.CB, (T0294)I243.CB) [> 4.3081 = 7.1802 < 9.3343] w=0.4259 to align
# Constraint # added constraint: constraint((T0294)L55.CB, (T0294)I78.CB) [> 3.4688 = 5.7813 < 7.5157] w=0.4258 to align
# Constraint # added constraint: constraint((T0294)E223.CB, (T0294)D247.CB) [> 3.3650 = 5.6084 < 7.2909] w=0.4240 to align
# Constraint # added constraint: constraint((T0294)V239.CB, (T0294)A266.CB) [> 4.3197 = 7.1994 < 9.3592] w=0.4238 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)V31.CB) [> 3.8003 = 6.3339 < 8.2341] w=0.4212 to align
# Constraint # added constraint: constraint((T0294)G165.CA, (T0294)Y182.CB) [> 4.5172 = 7.5287 < 9.7873] w=0.4209 to align
# Constraint # added constraint: constraint((T0294)S79.CB, (T0294)A309.CB) [> 3.1287 = 5.2144 < 6.7788] w=0.4205 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)E30.CB) [> 4.1909 = 6.9849 < 9.0803] w=0.4185 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)V77.CB) [> 3.3820 = 5.6366 < 7.3276] w=0.4173 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)W34.CB) [> 4.0890 = 6.8151 < 8.8596] w=0.4166 to align
# Constraint # added constraint: constraint((T0294)L254.CB, (T0294)A266.CB) [> 3.5135 = 5.8558 < 7.6125] w=0.4160 to align
# Constraint # added constraint: constraint((T0294)L118.CB, (T0294)G267.CA) [> 3.2171 = 5.3618 < 6.9703] w=0.4158 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)L268.CB) [> 4.2993 = 7.1655 < 9.3152] w=0.4158 to align
# Constraint # added constraint: constraint((T0294)K8.CB, (T0294)E32.CB) [> 4.0481 = 6.7468 < 8.7709] w=0.4135 to align
# Constraint # added constraint: constraint((T0294)F180.CB, (T0294)Q196.CB) [> 4.0205 = 6.7009 < 8.7112] w=0.4120 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)A266.CB) [> 4.3449 = 7.2415 < 9.4140] w=0.4098 to align
# Constraint # added constraint: constraint((T0294)L218.CB, (T0294)R245.CB) [> 2.5831 = 4.3051 < 5.5967] w=0.4097 to align
# Constraint # added constraint: constraint((T0294)L58.CB, (T0294)T80.CB) [> 4.0549 = 6.7581 < 8.7856] w=0.4088 to align
# Constraint # added constraint: constraint((T0294)G84.CA, (T0294)Y102.CB) [> 3.7269 = 6.2115 < 8.0750] w=0.4088 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)K76.CB) [> 3.6718 = 6.1196 < 7.9555] w=0.4088 to align
# Constraint # added constraint: constraint((T0294)K8.CB, (T0294)E30.CB) [> 2.8990 = 4.8316 < 6.2811] w=0.4088 to align
# Constraint # added constraint: constraint((T0294)L181.CB, (T0294)Q208.CB) [> 3.8830 = 6.4717 < 8.4132] w=0.4086 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)A215.CB) [> 4.5180 = 7.5301 < 9.7891] w=0.4084 to align
# Constraint # added constraint: constraint((T0294)I78.CB, (T0294)I93.CB) [> 3.9894 = 6.6491 < 8.6438] w=0.4081 to align
# Constraint # added constraint: constraint((T0294)E32.CB, (T0294)A52.CB) [> 4.3196 = 7.1994 < 9.3592] w=0.4070 to align
# Constraint # added constraint: constraint((T0294)T237.CB, (T0294)I263.CB) [> 4.3445 = 7.2408 < 9.4131] w=0.4063 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)C29.CB) [> 3.2690 = 5.4484 < 7.0829] w=0.4059 to align
# Constraint # added constraint: constraint((T0294)Q153.CB, (T0294)R179.CB) [> 4.0636 = 6.7726 < 8.8044] w=0.4020 to align
# Constraint # added constraint: constraint((T0294)R20.CB, (T0294)V31.CB) [> 3.3096 = 5.5159 < 7.1707] w=0.4010 to align
# Constraint # added constraint: constraint((T0294)L254.CB, (T0294)I263.CB) [> 3.9593 = 6.5989 < 8.5786] w=0.4003 to align
# Constraint # added constraint: constraint((T0294)L55.CB, (T0294)V77.CB) [> 3.8661 = 6.4434 < 8.3764] w=0.4003 to align
# Constraint # added constraint: constraint((T0294)R125.CB, (T0294)G148.CA) [> 3.5453 = 5.9088 < 7.6815] w=0.3982 to align
# Constraint # added constraint: constraint((T0294)L68.CB, (T0294)I93.CB) [> 3.6267 = 6.0444 < 7.8577] w=0.3978 to align
# Constraint # added constraint: constraint((T0294)A265.CB, (T0294)V289.CB) [> 4.2393 = 7.0655 < 9.1851] w=0.3953 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)Q208.CB) [> 4.5485 = 7.5808 < 9.8551] w=0.3934 to align
# Constraint # added constraint: constraint((T0294)G101.CA, (T0294)N312.CB) [> 3.6096 = 6.0160 < 7.8209] w=0.3918 to align
# Constraint # added constraint: constraint((T0294)L58.CB, (T0294)M81.CB) [> 3.4674 = 5.7790 < 7.5128] w=0.3918 to align
# Constraint # added constraint: constraint((T0294)T202.CB, (T0294)C226.CB) [> 4.2008 = 7.0014 < 9.1018] w=0.3894 to align
# Constraint # added constraint: constraint((T0294)V77.CB, (T0294)L313.CB) [> 3.6976 = 6.1627 < 8.0114] w=0.3864 to align
# Constraint # added constraint: constraint((T0294)D64.CB, (T0294)A89.CB) [> 3.5131 = 5.8552 < 7.6117] w=0.3833 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)I78.CB) [> 4.0276 = 6.7127 < 8.7266] w=0.3825 to align
# Constraint # added constraint: constraint((T0294)L59.CB, (T0294)T80.CB) [> 4.1376 = 6.8961 < 8.9649] w=0.3825 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)V270.CB) [> 3.8835 = 6.4726 < 8.4143] w=0.3824 to align
# Constraint # added constraint: constraint((T0294)T12.CB, (T0294)W34.CB) [> 3.3555 = 5.5925 < 7.2703] w=0.3822 to align
# Constraint # added constraint: constraint((T0294)V213.CB, (T0294)F240.CB) [> 4.5433 = 7.5721 < 9.8437] w=0.3819 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)V270.CB) [> 3.6134 = 6.0223 < 7.8290] w=0.3819 to align
# Constraint # added constraint: constraint((T0294)A265.CB, (T0294)C288.CB) [> 4.0858 = 6.8096 < 8.8525] w=0.3809 to align
# Constraint # added constraint: constraint((T0294)I85.CB, (T0294)V100.CB) [> 3.8400 = 6.4000 < 8.3199] w=0.3805 to align
# Constraint # added constraint: constraint((T0294)T111.CB, (T0294)A167.CB) [> 4.0715 = 6.7859 < 8.8216] w=0.3768 to align
# Constraint # added constraint: constraint((T0294)C57.CB, (T0294)M81.CB) [> 3.9938 = 6.6563 < 8.6532] w=0.3748 to align
# Constraint # added constraint: constraint((T0294)A52.CB, (T0294)N74.CB) [> 4.0190 = 6.6984 < 8.7079] w=0.3748 to align
# Constraint # added constraint: constraint((T0294)C57.CB, (T0294)T80.CB) [> 3.7977 = 6.3295 < 8.2284] w=0.3748 to align
# Constraint # added constraint: constraint((T0294)V63.CB, (T0294)L88.CB) [> 3.2100 = 5.3500 < 6.9550] w=0.3748 to align
# Constraint # added constraint: constraint((T0294)Y182.CB, (T0294)A192.CB) [> 3.2423 = 5.4038 < 7.0249] w=0.3729 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)R188.CB) [> 3.1178 = 5.1963 < 6.7552] w=0.3722 to align
# Constraint # added constraint: constraint((T0294)V77.CB, (T0294)G316.CA) [> 3.7689 = 6.2815 < 8.1660] w=0.3693 to align
# Constraint # added constraint: constraint((T0294)T103.CB, (T0294)N312.CB) [> 4.1892 = 6.9820 < 9.0766] w=0.3690 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)A266.CB) [> 4.2628 = 7.1047 < 9.2360] w=0.3686 to align
# Constraint # added constraint: constraint((T0294)M81.CB, (T0294)S306.CB) [> 3.7251 = 6.2086 < 8.0711] w=0.3663 to align
# Constraint # added constraint: constraint((T0294)S79.CB, (T0294)N312.CB) [> 3.3302 = 5.5504 < 7.2155] w=0.3663 to align
# Constraint # added constraint: constraint((T0294)D269.CB, (T0294)I294.CB) [> 3.7287 = 6.2144 < 8.0788] w=0.3663 to align
# Constraint # added constraint: constraint((T0294)A265.CB, (T0294)N287.CB) [> 2.6463 = 4.4104 < 5.7336] w=0.3663 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)G267.CA) [> 3.7467 = 6.2445 < 8.1178] w=0.3660 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)W34.CB) [> 4.1166 = 6.8610 < 8.9193] w=0.3655 to align
# Constraint # added constraint: constraint((T0294)G246.CA, (T0294)V270.CB) [> 2.7379 = 4.5631 < 5.9321] w=0.3651 to align
# Constraint # added constraint: constraint((T0294)A266.CB, (T0294)V289.CB) [> 4.3898 = 7.3163 < 9.5112] w=0.3639 to align
# Constraint # added constraint: constraint((T0294)A266.CB, (T0294)C288.CB) [> 3.1835 = 5.3058 < 6.8975] w=0.3639 to align
# Constraint # added constraint: constraint((T0294)V106.CB, (T0294)L308.CB) [> 3.5630 = 5.9383 < 7.7198] w=0.3634 to align
# Constraint # added constraint: constraint((T0294)S79.CB, (T0294)T103.CB) [> 3.9817 = 6.6361 < 8.6270] w=0.3626 to align
# Constraint # added constraint: constraint((T0294)L119.CB, (T0294)V156.CB) [> 4.5265 = 7.5441 < 9.8074] w=0.3603 to align
# Constraint # added constraint: constraint((T0294)L258.CB, (T0294)N287.CB) [> 3.7092 = 6.1820 < 8.0366] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)V289.CB) [> 3.5800 = 5.9667 < 7.7567] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)T121.CB, (T0294)V289.CB) [> 3.4950 = 5.8250 < 7.5725] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)L118.CB, (T0294)V289.CB) [> 3.4239 = 5.7065 < 7.4184] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)L114.CB, (T0294)I243.CB) [> 3.5047 = 5.8412 < 7.5935] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)T110.CB, (T0294)G295.CA) [> 3.5819 = 5.9698 < 7.7607] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)L107.CB, (T0294)T301.CB) [> 2.7489 = 4.5815 < 5.9559] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)I85.CB, (T0294)Y102.CB) [> 3.3759 = 5.6266 < 7.3145] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)M81.CB, (T0294)A309.CB) [> 2.7322 = 4.5537 < 5.9199] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)M81.CB, (T0294)M305.CB) [> 3.0055 = 5.0092 < 6.5120] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)L258.CB, (T0294)C288.CB) [> 4.1115 = 6.8525 < 8.9082] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)A264.CB, (T0294)N287.CB) [> 3.9855 = 6.6425 < 8.6353] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)A266.CB, (T0294)N287.CB) [> 4.3050 = 7.1751 < 9.3276] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)G267.CA, (T0294)C288.CB) [> 3.7532 = 6.2554 < 8.1320] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)G267.CA, (T0294)V289.CB) [> 2.6110 = 4.3516 < 5.6571] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)G267.CA, (T0294)I290.CB) [> 4.0248 = 6.7079 < 8.7203] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)L268.CB, (T0294)V289.CB) [> 4.5030 = 7.5049 < 9.7564] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)L268.CB, (T0294)I290.CB) [> 3.4146 = 5.6910 < 7.3983] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)L268.CB, (T0294)L291.CB) [> 4.4910 = 7.4850 < 9.7305] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)D269.CB, (T0294)L291.CB) [> 2.7794 = 4.6323 < 6.0219] w=0.3578 to align
# Constraint # added constraint: constraint((T0294)I168.CB, (T0294)I243.CB) [> 4.2220 = 7.0366 < 9.1476] w=0.3575 to align
# Constraint # added constraint: constraint((T0294)G246.CA, (T0294)T271.CB) [> 3.4294 = 5.7157 < 7.4304] w=0.3571 to align
# Constraint # added constraint: constraint((T0294)L68.CB, (T0294)A89.CB) [> 3.8513 = 6.4188 < 8.3444] w=0.3565 to align
# Constraint # added constraint: constraint((T0294)R20.CB, (T0294)Q33.CB) [> 3.8098 = 6.3497 < 8.2546] w=0.3558 to align
# Constraint # added constraint: constraint((T0294)L119.CB, (T0294)L172.CB) [> 4.4564 = 7.4273 < 9.6555] w=0.3506 to align
# Constraint # added constraint: constraint((T0294)M234.CB, (T0294)A257.CB) [> 4.5544 = 7.5906 < 9.8678] w=0.3496 to align
# Constraint # added constraint: constraint((T0294)K8.CB, (T0294)V31.CB) [> 4.5124 = 7.5206 < 9.7768] w=0.3493 to align
# Constraint # added constraint: constraint((T0294)V106.CB, (T0294)T301.CB) [> 3.1829 = 5.3049 < 6.8963] w=0.3492 to align
# Constraint # added constraint: constraint((T0294)L59.CB, (T0294)S82.CB) [> 3.5282 = 5.8803 < 7.6444] w=0.3492 to align
# Constraint # added constraint: constraint((T0294)V83.CB, (T0294)P104.CB) [> 3.5596 = 5.9327 < 7.7125] w=0.3492 to align
# Constraint # added constraint: constraint((T0294)D247.CB, (T0294)S272.CB) [> 3.3141 = 5.5236 < 7.1806] w=0.3492 to align
# Constraint # added constraint: constraint((T0294)L68.CB, (T0294)R96.CB) [> 3.5814 = 5.9690 < 7.7597] w=0.3489 to align
# Constraint # added constraint: constraint((T0294)V63.CB, (T0294)H87.CB) [> 3.7771 = 6.2952 < 8.1838] w=0.3488 to align
# Constraint # added constraint: constraint((T0294)V63.CB, (T0294)A89.CB) [> 3.9246 = 6.5410 < 8.5033] w=0.3485 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)V31.CB) [> 4.5377 = 7.5628 < 9.8316] w=0.3482 to align
# Constraint # added constraint: constraint((T0294)E236.CB, (T0294)G261.CA) [> 4.0861 = 6.8101 < 8.8531] w=0.3411 to align
# Constraint # added constraint: constraint((T0294)D269.CB, (T0294)G295.CA) [> 3.2415 = 5.4025 < 7.0232] w=0.3407 to align
# Constraint # added constraint: constraint((T0294)P127.CB, (T0294)V289.CB) [> 3.4293 = 5.7155 < 7.4301] w=0.3407 to align
# Constraint # added constraint: constraint((T0294)A52.CB, (T0294)L75.CB) [> 3.7431 = 6.2385 < 8.1100] w=0.3407 to align
# Constraint # added constraint: constraint((T0294)S244.CB, (T0294)V270.CB) [> 3.9453 = 6.5756 < 8.5482] w=0.3400 to align
# Constraint # added constraint: constraint((T0294)D269.CB, (T0294)H293.CB) [> 3.4444 = 5.7407 < 7.4629] w=0.3397 to align
# Constraint # added constraint: constraint((T0294)V270.CB, (T0294)H293.CB) [> 3.4151 = 5.6918 < 7.3993] w=0.3397 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)D269.CB) [> 4.1168 = 6.8614 < 8.9198] w=0.3393 to align
# Constraint # added constraint: constraint((T0294)K8.CB, (T0294)C29.CB) [> 4.2441 = 7.0735 < 9.1955] w=0.3376 to align
# Constraint # added constraint: constraint((T0294)G184.CA, (T0294)F199.CB) [> 3.9701 = 6.6168 < 8.6018] w=0.3366 to align
# Constraint # added constraint: constraint((T0294)H62.CB, (T0294)H87.CB) [> 3.3849 = 5.6416 < 7.3340] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)S82.CB, (T0294)T103.CB) [> 3.9164 = 6.5273 < 8.4855] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)S82.CB, (T0294)M305.CB) [> 4.0045 = 6.6743 < 8.6765] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)V83.CB, (T0294)T103.CB) [> 3.9833 = 6.6389 < 8.6305] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)T110.CB, (T0294)T298.CB) [> 2.7832 = 4.6386 < 6.0302] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)T111.CB, (T0294)G295.CA) [> 3.0528 = 5.0880 < 6.6144] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)L114.CB, (T0294)D269.CB) [> 3.8859 = 6.4766 < 8.4195] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)L114.CB, (T0294)L291.CB) [> 4.4857 = 7.4762 < 9.7190] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)L114.CB, (T0294)G295.CA) [> 2.5372 = 4.2286 < 5.4972] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)G295.CA) [> 3.7375 = 6.2292 < 8.0980] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)G246.CA, (T0294)S272.CB) [> 3.0497 = 5.0829 < 6.6077] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)L258.CB, (T0294)L285.CB) [> 3.3347 = 5.5578 < 7.2251] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)E274.CB, (T0294)H293.CB) [> 3.7539 = 6.2565 < 8.1334] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)I78.CB, (T0294)L88.CB) [> 3.6945 = 6.1575 < 8.0048] w=0.3322 to align
# Constraint # added constraint: constraint((T0294)R245.CB, (T0294)V270.CB) [> 3.3949 = 5.6582 < 7.3557] w=0.3315 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)A197.CB) [> 4.4360 = 7.3933 < 9.6113] w=0.3310 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)L56.CB) [> 3.6839 = 6.1398 < 7.9817] w=0.3293 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)F199.CB) [> 4.5541 = 7.5902 < 9.8672] w=0.3293 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)R185.CB) [> 4.6283 = 7.7138 < 10.0280] w=0.3278 to align
# Constraint # added constraint: constraint((T0294)T155.CB, (T0294)Q178.CB) [> 2.9296 = 4.8827 < 6.3475] w=0.3248 to align
# Constraint # added constraint: constraint((T0294)A169.CB, (T0294)R179.CB) [> 3.1830 = 5.3050 < 6.8966] w=0.3248 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)R179.CB) [> 3.8819 = 6.4698 < 8.4107] w=0.3248 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)R179.CB) [> 3.8545 = 6.4241 < 8.3513] w=0.3248 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)Q178.CB) [> 4.1639 = 6.9399 < 9.0219] w=0.3248 to align
# Constraint # added constraint: constraint((T0294)H53.CB, (T0294)N74.CB) [> 3.4634 = 5.7723 < 7.5040] w=0.3237 to align
# Constraint # added constraint: constraint((T0294)Y255.CB, (T0294)L282.CB) [> 3.8802 = 6.4670 < 8.4071] w=0.3232 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)L56.CB) [> 4.1864 = 6.9774 < 9.0706] w=0.3218 to align
# Constraint # added constraint: constraint((T0294)L68.CB, (T0294)I98.CB) [> 4.0425 = 6.7375 < 8.7587] w=0.3160 to align
# Constraint # added constraint: constraint((T0294)G51.CA, (T0294)N74.CB) [> 3.3820 = 5.6366 < 7.3276] w=0.3152 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)I78.CB) [> 4.2128 = 7.0213 < 9.1277] w=0.3151 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)A197.CB) [> 4.4792 = 7.4654 < 9.7050] w=0.3148 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)A206.CB) [> 4.2371 = 7.0619 < 9.1805] w=0.3123 to align
# Constraint # added constraint: constraint((T0294)Q166.CB, (T0294)F195.CB) [> 4.0676 = 6.7794 < 8.8132] w=0.3118 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)A264.CB) [> 4.3019 = 7.1699 < 9.3209] w=0.3092 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)L55.CB) [> 3.3699 = 5.6165 < 7.3014] w=0.3090 to align
# Constraint # added constraint: constraint((T0294)F180.CB, (T0294)S209.CB) [> 3.9256 = 6.5427 < 8.5055] w=0.3083 to align
# Constraint # added constraint: constraint((T0294)A169.CB, (T0294)L181.CB) [> 3.7540 = 6.2567 < 8.1337] w=0.3081 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)L181.CB) [> 3.1674 = 5.2790 < 6.8628] w=0.3081 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)L181.CB) [> 4.1545 = 6.9241 < 9.0014] w=0.3081 to align
# Constraint # added constraint: constraint((T0294)Q251.CB, (T0294)S272.CB) [> 3.4192 = 5.6986 < 7.4082] w=0.3067 to align
# Constraint # added constraint: constraint((T0294)L107.CB, (T0294)S296.CB) [> 2.9325 = 4.8874 < 6.3537] w=0.3067 to align
# Constraint # added constraint: constraint((T0294)D105.CB, (T0294)R163.CB) [> 3.6399 = 6.0665 < 7.8864] w=0.3067 to align
# Constraint # added constraint: constraint((T0294)T80.CB, (T0294)A309.CB) [> 4.2295 = 7.0492 < 9.1639] w=0.3067 to align
# Constraint # added constraint: constraint((T0294)S60.CB, (T0294)H87.CB) [> 3.8556 = 6.4260 < 8.3539] w=0.3067 to align
# Constraint # added constraint: constraint((T0294)Y255.CB, (T0294)P281.CB) [> 3.1581 = 5.2634 < 6.8425] w=0.3061 to align
# Constraint # added constraint: constraint((T0294)L55.CB, (T0294)A71.CB) [> 4.1917 = 6.9862 < 9.0820] w=0.3057 to align
# Constraint # added constraint: constraint((T0294)V49.CB, (T0294)A71.CB) [> 3.1863 = 5.3104 < 6.9036] w=0.3056 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)L268.CB) [> 4.2370 = 7.0617 < 9.1802] w=0.3050 to align
# Constraint # added constraint: constraint((T0294)L107.CB, (T0294)M305.CB) [> 3.8574 = 6.4290 < 8.3577] w=0.3032 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)Q186.CB) [> 4.4184 = 7.3640 < 9.5732] w=0.3017 to align
# Constraint # added constraint: constraint((T0294)L23.CB, (T0294)A310.CB) [> 3.5171 = 5.8619 < 7.6205] w=0.3012 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)Q33.CB) [> 4.2384 = 7.0640 < 9.1832] w=0.2985 to align
# Constraint # added constraint: constraint((T0294)D61.CB, (T0294)H87.CB) [> 4.0369 = 6.7282 < 8.7466] w=0.2981 to align
# Constraint # added constraint: constraint((T0294)L268.CB, (T0294)C288.CB) [> 4.3012 = 7.1686 < 9.3192] w=0.2981 to align
# Constraint # added constraint: constraint((T0294)G19.CA, (T0294)S306.CB) [> 3.1483 = 5.2471 < 6.8213] w=0.2977 to align
# Constraint # added constraint: constraint((T0294)G184.CA, (T0294)C216.CB) [> 4.4946 = 7.4911 < 9.7384] w=0.2975 to align
# Constraint # added constraint: constraint((T0294)S154.CB, (T0294)Q178.CB) [> 4.2721 = 7.1201 < 9.2561] w=0.2952 to align
# Constraint # added constraint: constraint((T0294)C216.CB, (T0294)R245.CB) [> 4.3790 = 7.2984 < 9.4879] w=0.2921 to align
# Constraint # added constraint: constraint((T0294)I15.CB, (T0294)Q33.CB) [> 3.5398 = 5.8997 < 7.6696] w=0.2912 to align
# Constraint # added constraint: constraint((T0294)L118.CB, (T0294)L291.CB) [> 4.3610 = 7.2683 < 9.4488] w=0.2896 to align
# Constraint # added constraint: constraint((T0294)T110.CB, (T0294)A297.CB) [> 4.2538 = 7.0896 < 9.2165] w=0.2896 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)A52.CB) [> 2.8374 = 4.7291 < 6.1478] w=0.2891 to align
# Constraint # added constraint: constraint((T0294)E46.CB, (T0294)I67.CB) [> 3.9241 = 6.5403 < 8.5023] w=0.2886 to align
# Constraint # added constraint: constraint((T0294)K8.CB, (T0294)A52.CB) [> 2.8312 = 4.7187 < 6.1343] w=0.2882 to align
# Constraint # added constraint: constraint((T0294)F180.CB, (T0294)L205.CB) [> 3.2507 = 5.4178 < 7.0431] w=0.2843 to align
# Constraint # added constraint: constraint((T0294)T111.CB, (T0294)S296.CB) [> 3.4635 = 5.7726 < 7.5043] w=0.2811 to align
# Constraint # added constraint: constraint((T0294)T110.CB, (T0294)S296.CB) [> 3.1478 = 5.2464 < 6.8203] w=0.2811 to align
# Constraint # added constraint: constraint((T0294)R125.CB, (T0294)C147.CB) [> 3.9925 = 6.6541 < 8.6504] w=0.2808 to align
# Constraint # added constraint: constraint((T0294)R179.CB, (T0294)Q196.CB) [> 3.9597 = 6.5996 < 8.5794] w=0.2772 to align
# Constraint # added constraint: constraint((T0294)F180.CB, (T0294)F195.CB) [> 3.9913 = 6.6521 < 8.6477] w=0.2765 to align
# Constraint # added constraint: constraint((T0294)L58.CB, (T0294)S82.CB) [> 3.6081 = 6.0135 < 7.8175] w=0.2726 to align
# Constraint # added constraint: constraint((T0294)L58.CB, (T0294)S79.CB) [> 3.8317 = 6.3861 < 8.3020] w=0.2718 to align
# Constraint # added constraint: constraint((T0294)G162.CA, (T0294)R188.CB) [> 4.2268 = 7.0447 < 9.1581] w=0.2715 to align
# Constraint # added constraint: constraint((T0294)K8.CB, (T0294)G54.CA) [> 4.2565 = 7.0942 < 9.2225] w=0.2712 to align
# Constraint # added constraint: constraint((T0294)G72.CA, (T0294)I98.CB) [> 4.0099 = 6.6832 < 8.6882] w=0.2711 to align
# Constraint # added constraint: constraint((T0294)P187.CB, (T0294)F199.CB) [> 3.8655 = 6.4426 < 8.3753] w=0.2709 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)L55.CB) [> 4.2454 = 7.0757 < 9.1984] w=0.2709 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)L23.CB) [> 3.7907 = 6.3179 < 8.2132] w=0.2699 to align
# Constraint # added constraint: constraint((T0294)R179.CB, (T0294)A197.CB) [> 3.3421 = 5.5702 < 7.2413] w=0.2690 to align
# Constraint # added constraint: constraint((T0294)L59.CB, (T0294)H87.CB) [> 3.7821 = 6.3035 < 8.1946] w=0.2641 to align
# Constraint # added constraint: constraint((T0294)Q251.CB, (T0294)T271.CB) [> 4.2274 = 7.0456 < 9.1593] w=0.2638 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)A52.CB) [> 3.8367 = 6.3945 < 8.3129] w=0.2633 to align
# Constraint # added constraint: constraint((T0294)V49.CB, (T0294)L75.CB) [> 3.8880 = 6.4800 < 8.4241] w=0.2630 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)K262.CB) [> 4.1446 = 6.9077 < 8.9800] w=0.2622 to align
# Constraint # added constraint: constraint((T0294)V77.CB, (T0294)L317.CB) [> 3.9819 = 6.6365 < 8.6274] w=0.2586 to align
# Constraint # added constraint: constraint((T0294)M7.CB, (T0294)E30.CB) [> 4.0079 = 6.6798 < 8.6838] w=0.2557 to align
# Constraint # added constraint: constraint((T0294)M7.CB, (T0294)C29.CB) [> 3.2064 = 5.3440 < 6.9472] w=0.2557 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)M81.CB) [> 3.6776 = 6.1293 < 7.9681] w=0.2555 to align
# Constraint # added constraint: constraint((T0294)H62.CB, (T0294)L88.CB) [> 4.5427 = 7.5711 < 9.8425] w=0.2555 to align
# Constraint # added constraint: constraint((T0294)I85.CB, (T0294)G101.CA) [> 4.3761 = 7.2936 < 9.4816] w=0.2555 to align
# Constraint # added constraint: constraint((T0294)L118.CB, (T0294)D269.CB) [> 4.2531 = 7.0885 < 9.2150] w=0.2555 to align
# Constraint # added constraint: constraint((T0294)G246.CA, (T0294)L268.CB) [> 4.4576 = 7.4294 < 9.6582] w=0.2555 to align
# Constraint # added constraint: constraint((T0294)D269.CB, (T0294)P292.CB) [> 4.4949 = 7.4914 < 9.7388] w=0.2555 to align
# Constraint # added constraint: constraint((T0294)V249.CB, (T0294)L268.CB) [> 4.5287 = 7.5479 < 9.8122] w=0.2555 to align
# Constraint # added constraint: constraint((T0294)K8.CB, (T0294)G51.CA) [> 3.6087 = 6.0144 < 7.8188] w=0.2548 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)L56.CB) [> 2.8873 = 4.8122 < 6.2559] w=0.2548 to align
# Constraint # added constraint: constraint((T0294)C147.CB, (T0294)V239.CB) [> 3.8000 = 6.3334 < 8.2333] w=0.2513 to align
# Constraint # added constraint: constraint((T0294)G19.CA, (T0294)A310.CB) [> 3.2255 = 5.3759 < 6.9887] w=0.2496 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)D35.CB) [> 4.1462 = 6.9104 < 8.9835] w=0.2487 to align
# Constraint # added constraint: constraint((T0294)R99.CB, (T0294)M322.CB) [> 3.8281 = 6.3802 < 8.2943] w=0.2470 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)S79.CB) [> 4.4690 = 7.4483 < 9.6827] w=0.2470 to align
# Constraint # added constraint: constraint((T0294)V49.CB, (T0294)I67.CB) [> 3.8078 = 6.3464 < 8.2503] w=0.2470 to align
# Constraint # added constraint: constraint((T0294)A22.CB, (T0294)A310.CB) [> 3.1232 = 5.2053 < 6.7669] w=0.2466 to align
# Constraint # added constraint: constraint((T0294)V63.CB, (T0294)I93.CB) [> 4.5341 = 7.5568 < 9.8239] w=0.2463 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)G54.CA) [> 3.1051 = 5.1752 < 6.7278] w=0.2463 to align
# Constraint # added constraint: constraint((T0294)K8.CB, (T0294)H53.CB) [> 3.3125 = 5.5209 < 7.1772] w=0.2463 to align
# Constraint # added constraint: constraint((T0294)E46.CB, (T0294)A70.CB) [> 3.2494 = 5.4158 < 7.0405] w=0.2461 to align
# Constraint # added constraint: constraint((T0294)A50.CB, (T0294)A71.CB) [> 4.0602 = 6.7669 < 8.7970] w=0.2460 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)W34.CB) [> 3.9400 = 6.5666 < 8.5366] w=0.2450 to align
# Constraint # added constraint: constraint((T0294)L75.CB, (T0294)R96.CB) [> 4.4770 = 7.4616 < 9.7001] w=0.2434 to align
# Constraint # added constraint: constraint((T0294)P275.CB, (T0294)P292.CB) [> 4.1876 = 6.9793 < 9.0730] w=0.2418 to align
# Constraint # added constraint: constraint((T0294)G101.CA, (T0294)M322.CB) [> 3.8007 = 6.3344 < 8.2348] w=0.2385 to align
# Constraint # added constraint: constraint((T0294)R99.CB, (T0294)E325.CB) [> 3.6989 = 6.1648 < 8.0142] w=0.2385 to align
# Constraint # added constraint: constraint((T0294)H53.CB, (T0294)K76.CB) [> 3.2391 = 5.3986 < 7.0181] w=0.2385 to align
# Constraint # added constraint: constraint((T0294)G246.CA, (T0294)E274.CB) [> 4.3526 = 7.2544 < 9.4307] w=0.2383 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)H53.CB) [> 4.0759 = 6.7932 < 8.8311] w=0.2380 to align
# Constraint # added constraint: constraint((T0294)S82.CB, (T0294)P104.CB) [> 3.7616 = 6.2693 < 8.1501] w=0.2377 to align
# Constraint # added constraint: constraint((T0294)A42.CB, (T0294)I67.CB) [> 3.5786 = 5.9643 < 7.7535] w=0.2374 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)L181.CB) [> 4.3200 = 7.2000 < 9.3600] w=0.2358 to align
# Constraint # added constraint: constraint((T0294)G165.CA, (T0294)L181.CB) [> 4.5305 = 7.5508 < 9.8160] w=0.2340 to align
# Constraint # added constraint: constraint((T0294)C29.CB, (T0294)L314.CB) [> 4.0576 = 6.7627 < 8.7915] w=0.2302 to align
# Constraint # added constraint: constraint((T0294)G101.CA, (T0294)S324.CB) [> 3.3766 = 5.6277 < 7.3160] w=0.2300 to align
# Constraint # added constraint: constraint((T0294)Y102.CB, (T0294)S324.CB) [> 3.3320 = 5.5533 < 7.2194] w=0.2300 to align
# Constraint # added constraint: constraint((T0294)D269.CB, (T0294)I290.CB) [> 4.4993 = 7.4989 < 9.7486] w=0.2300 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)A309.CB) [> 3.5303 = 5.8838 < 7.6490] w=0.2300 to align
# Constraint # added constraint: constraint((T0294)R99.CB, (T0294)G316.CA) [> 4.1906 = 6.9843 < 9.0796] w=0.2300 to align
# Constraint # added constraint: constraint((T0294)V106.CB, (T0294)S296.CB) [> 4.4828 = 7.4714 < 9.7128] w=0.2300 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)N287.CB) [> 4.2527 = 7.0879 < 9.2142] w=0.2300 to align
# Constraint # added constraint: constraint((T0294)E128.CB, (T0294)K286.CB) [> 3.0589 = 5.0981 < 6.6275] w=0.2300 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)V49.CB) [> 3.4181 = 5.6969 < 7.4060] w=0.2299 to align
# Constraint # added constraint: constraint((T0294)V239.CB, (T0294)G267.CA) [> 4.5505 = 7.5841 < 9.8594] w=0.2295 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)G54.CA) [> 3.9267 = 6.5444 < 8.5078] w=0.2295 to align
# Constraint # added constraint: constraint((T0294)L114.CB, (T0294)A297.CB) [> 3.4387 = 5.7312 < 7.4505] w=0.2292 to align
# Constraint # added constraint: constraint((T0294)M81.CB, (T0294)Y102.CB) [> 3.3794 = 5.6323 < 7.3220] w=0.2285 to align
# Constraint # added constraint: constraint((T0294)A71.CB, (T0294)I98.CB) [> 3.7946 = 6.3243 < 8.2216] w=0.2265 to align
# Constraint # added constraint: constraint((T0294)L119.CB, (T0294)I243.CB) [> 3.6055 = 6.0092 < 7.8119] w=0.2253 to align
# Constraint # added constraint: constraint((T0294)V249.CB, (T0294)S272.CB) [> 4.2336 = 7.0560 < 9.1728] w=0.2243 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)L313.CB) [> 3.9196 = 6.5327 < 8.4925] w=0.2215 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)L313.CB) [> 3.9760 = 6.6267 < 8.6147] w=0.2210 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)F211.CB) [> 4.4219 = 7.3698 < 9.5807] w=0.2209 to align
# Constraint # added constraint: constraint((T0294)A206.CB, (T0294)K235.CB) [> 4.5213 = 7.5355 < 9.7961] w=0.2189 to align
# Constraint # added constraint: constraint((T0294)T12.CB, (T0294)Q33.CB) [> 4.2647 = 7.1079 < 9.2402] w=0.2166 to align
# Constraint # added constraint: constraint((T0294)S79.CB, (T0294)A310.CB) [> 4.3743 = 7.2904 < 9.4776] w=0.2160 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)V77.CB) [> 4.1273 = 6.8788 < 8.9424] w=0.2158 to align
# Constraint # added constraint: constraint((T0294)G162.CA, (T0294)T183.CB) [> 4.3275 = 7.2126 < 9.3764] w=0.2156 to align
# Constraint # added constraint: constraint((T0294)A266.CB, (T0294)L285.CB) [> 4.5774 = 7.6290 < 9.9177] w=0.2130 to align
# Constraint # added constraint: constraint((T0294)G101.CA, (T0294)E325.CB) [> 3.2709 = 5.4515 < 7.0870] w=0.2130 to align
# Constraint # added constraint: constraint((T0294)K76.CB, (T0294)G97.CA) [> 4.1790 = 6.9649 < 9.0544] w=0.2130 to align
# Constraint # added constraint: constraint((T0294)A22.CB, (T0294)L307.CB) [> 4.0117 = 6.6861 < 8.6919] w=0.2130 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)N74.CB) [> 3.9408 = 6.5680 < 8.5384] w=0.2129 to align
# Constraint # added constraint: constraint((T0294)C29.CB, (T0294)L317.CB) [> 3.9851 = 6.6418 < 8.6344] w=0.2122 to align
# Constraint # added constraint: constraint((T0294)M81.CB, (T0294)P104.CB) [> 3.9164 = 6.5273 < 8.4854] w=0.2122 to align
# Constraint # added constraint: constraint((T0294)T80.CB, (T0294)P104.CB) [> 3.4236 = 5.7060 < 7.4178] w=0.2122 to align
# Constraint # added constraint: constraint((T0294)F180.CB, (T0294)Q208.CB) [> 3.8586 = 6.4311 < 8.3604] w=0.2118 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)C57.CB) [> 4.2229 = 7.0383 < 9.1497] w=0.2115 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)V289.CB) [> 4.2848 = 7.1413 < 9.2837] w=0.2100 to align
# Constraint # added constraint: constraint((T0294)D109.CB, (T0294)R163.CB) [> 3.4049 = 5.6749 < 7.3773] w=0.2092 to align
# Constraint # added constraint: constraint((T0294)T222.CB, (T0294)D247.CB) [> 4.2170 = 7.0283 < 9.1368] w=0.2089 to align
# Constraint # added constraint: constraint((T0294)G184.CA, (T0294)T202.CB) [> 4.0445 = 6.7408 < 8.7631] w=0.2085 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)M81.CB) [> 4.0738 = 6.7897 < 8.8266] w=0.2055 to align
# Constraint # added constraint: constraint((T0294)A259.CB, (T0294)L285.CB) [> 4.3389 = 7.2315 < 9.4010] w=0.2044 to align
# Constraint # added constraint: constraint((T0294)T271.CB, (T0294)L282.CB) [> 4.3906 = 7.3177 < 9.5131] w=0.2044 to align
# Constraint # added constraint: constraint((T0294)T271.CB, (T0294)H293.CB) [> 4.5046 = 7.5077 < 9.7600] w=0.2044 to align
# Constraint # added constraint: constraint((T0294)V83.CB, (T0294)S296.CB) [> 4.1025 = 6.8376 < 8.8888] w=0.2044 to align
# Constraint # added constraint: constraint((T0294)L107.CB, (T0294)G295.CA) [> 4.2679 = 7.1132 < 9.2471] w=0.2044 to align
# Constraint # added constraint: constraint((T0294)R125.CB, (T0294)N287.CB) [> 4.2083 = 7.0138 < 9.1179] w=0.2044 to align
# Constraint # added constraint: constraint((T0294)P127.CB, (T0294)C288.CB) [> 4.4318 = 7.3863 < 9.6022] w=0.2044 to align
# Constraint # added constraint: constraint((T0294)R20.CB, (T0294)S306.CB) [> 4.1373 = 6.8955 < 8.9642] w=0.2044 to align
# Constraint # added constraint: constraint((T0294)A52.CB, (T0294)A71.CB) [> 4.0336 = 6.7227 < 8.7395] w=0.2044 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)L55.CB) [> 4.4290 = 7.3818 < 9.5963] w=0.2041 to align
# Constraint # added constraint: constraint((T0294)T12.CB, (T0294)L56.CB) [> 4.1885 = 6.9809 < 9.0751] w=0.2040 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)L58.CB) [> 2.6493 = 4.4155 < 5.7402] w=0.2040 to align
# Constraint # added constraint: constraint((T0294)I15.CB, (T0294)S306.CB) [> 3.5300 = 5.8833 < 7.6483] w=0.2039 to align
# Constraint # added constraint: constraint((T0294)L58.CB, (T0294)I78.CB) [> 3.7698 = 6.2830 < 8.1679] w=0.2037 to align
# Constraint # added constraint: constraint((T0294)T12.CB, (T0294)L45.CB) [> 4.2516 = 7.0861 < 9.2119] w=0.2007 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)P187.CB) [> 3.6824 = 6.1373 < 7.9785] w=0.1959 to align
# Constraint # added constraint: constraint((T0294)L59.CB, (T0294)M81.CB) [> 3.6494 = 6.0823 < 7.9071] w=0.1959 to align
# Constraint # added constraint: constraint((T0294)L23.CB, (T0294)L313.CB) [> 4.3405 = 7.2341 < 9.4044] w=0.1954 to align
# Constraint # added constraint: constraint((T0294)T12.CB, (T0294)L58.CB) [> 3.9860 = 6.6433 < 8.6363] w=0.1952 to align
# Constraint # added constraint: constraint((T0294)L59.CB, (T0294)S79.CB) [> 3.2560 = 5.4266 < 7.0546] w=0.1951 to align
# Constraint # added constraint: constraint((T0294)A169.CB, (T0294)Q196.CB) [> 3.5535 = 5.9225 < 7.6992] w=0.1932 to align
# Constraint # added constraint: constraint((T0294)L45.CB, (T0294)I67.CB) [> 3.4489 = 5.7481 < 7.4726] w=0.1895 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)I290.CB) [> 3.1031 = 5.1719 < 6.7234] w=0.1872 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)C57.CB) [> 3.6368 = 6.0614 < 7.8798] w=0.1869 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)G48.CA) [> 3.9234 = 6.5389 < 8.5006] w=0.1869 to align
# Constraint # added constraint: constraint((T0294)E18.CB, (T0294)S306.CB) [> 3.7613 = 6.2689 < 8.1496] w=0.1869 to align
# Constraint # added constraint: constraint((T0294)C147.CB, (T0294)A264.CB) [> 4.0900 = 6.8167 < 8.8618] w=0.1864 to align
# Constraint # added constraint: constraint((T0294)V239.CB, (T0294)V289.CB) [> 2.9164 = 4.8606 < 6.3188] w=0.1850 to align
# Constraint # added constraint: constraint((T0294)T183.CB, (T0294)E204.CB) [> 4.4541 = 7.4234 < 9.6505] w=0.1816 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)R245.CB) [> 3.9150 = 6.5251 < 8.4826] w=0.1808 to align
# Constraint # added constraint: constraint((T0294)Y255.CB, (T0294)L285.CB) [> 3.5955 = 5.9925 < 7.7903] w=0.1789 to align
# Constraint # added constraint: constraint((T0294)S82.CB, (T0294)S296.CB) [> 3.8624 = 6.4373 < 8.3685] w=0.1789 to align
# Constraint # added constraint: constraint((T0294)T271.CB, (T0294)I290.CB) [> 4.4106 = 7.3510 < 9.5563] w=0.1789 to align
# Constraint # added constraint: constraint((T0294)P104.CB, (T0294)R163.CB) [> 4.0190 = 6.6984 < 8.7079] w=0.1789 to align
# Constraint # added constraint: constraint((T0294)Y102.CB, (T0294)L326.CB) [> 3.3664 = 5.6107 < 7.2940] w=0.1789 to align
# Constraint # added constraint: constraint((T0294)G101.CA, (T0294)L326.CB) [> 3.0000 = 5.0000 < 6.4999] w=0.1789 to align
# Constraint # added constraint: constraint((T0294)V100.CB, (T0294)L326.CB) [> 2.5810 = 4.3017 < 5.5922] w=0.1789 to align
# Constraint # added constraint: constraint((T0294)C29.CB, (T0294)L313.CB) [> 4.4508 = 7.4180 < 9.6434] w=0.1789 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)G267.CA) [> 4.5024 = 7.5040 < 9.7552] w=0.1786 to align
# Constraint # added constraint: constraint((T0294)A206.CB, (T0294)A238.CB) [> 4.5483 = 7.5805 < 9.8546] w=0.1775 to align
# Constraint # added constraint: constraint((T0294)L90.CB, (T0294)Y102.CB) [> 3.1713 = 5.2856 < 6.8712] w=0.1749 to align
# Constraint # added constraint: constraint((T0294)G184.CA, (T0294)V200.CB) [> 4.2108 = 7.0181 < 9.1235] w=0.1725 to align
# Constraint # added constraint: constraint((T0294)V116.CB, (T0294)I164.CB) [> 2.7209 = 4.5348 < 5.8953] w=0.1723 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)L291.CB) [> 3.0193 = 5.0322 < 6.5419] w=0.1707 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)L291.CB) [> 4.1170 = 6.8616 < 8.9201] w=0.1707 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)T80.CB) [> 4.6299 = 7.7165 < 10.0314] w=0.1704 to align
# Constraint # added constraint: constraint((T0294)A26.CB, (T0294)L314.CB) [> 3.3359 = 5.5599 < 7.2278] w=0.1699 to align
# Constraint # added constraint: constraint((T0294)W34.CB, (T0294)E44.CB) [> 3.9631 = 6.6052 < 8.5868] w=0.1676 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)R185.CB) [> 4.4253 = 7.3754 < 9.5880] w=0.1672 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)I290.CB) [> 3.9490 = 6.5817 < 8.5562] w=0.1668 to align
# Constraint # added constraint: constraint((T0294)V116.CB, (T0294)I243.CB) [> 4.1704 = 6.9506 < 9.0358] w=0.1667 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)A257.CB) [> 4.1761 = 6.9601 < 9.0482] w=0.1642 to align
# Constraint # added constraint: constraint((T0294)S36.CB, (T0294)L45.CB) [> 4.0630 = 6.7716 < 8.8031] w=0.1637 to align
# Constraint # added constraint: constraint((T0294)L225.CB, (T0294)S244.CB) [> 4.5497 = 7.5828 < 9.8576] w=0.1634 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)P292.CB) [> 3.7782 = 6.2969 < 8.1860] w=0.1622 to align
# Constraint # added constraint: constraint((T0294)L58.CB, (T0294)H87.CB) [> 4.3779 = 7.2965 < 9.4855] w=0.1618 to align
# Constraint # added constraint: constraint((T0294)E32.CB, (T0294)G48.CA) [> 3.7543 = 6.2572 < 8.1343] w=0.1618 to align
# Constraint # added constraint: constraint((T0294)S296.CB, (T0294)M305.CB) [> 4.3650 = 7.2749 < 9.4574] w=0.1617 to align
# Constraint # added constraint: constraint((T0294)T80.CB, (T0294)L90.CB) [> 3.3734 = 5.6224 < 7.3091] w=0.1611 to align
# Constraint # added constraint: constraint((T0294)S60.CB, (T0294)S79.CB) [> 3.8684 = 6.4473 < 8.3815] w=0.1611 to align
# Constraint # added constraint: constraint((T0294)M7.CB, (T0294)H53.CB) [> 3.1934 = 5.3223 < 6.9190] w=0.1609 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)L59.CB) [> 3.7591 = 6.2652 < 8.1448] w=0.1607 to align
# Constraint # added constraint: constraint((T0294)C57.CB, (T0294)L88.CB) [> 4.2712 = 7.1186 < 9.2542] w=0.1599 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)N250.CB) [> 4.5230 = 7.5383 < 9.7998] w=0.1578 to align
# Constraint # added constraint: constraint((T0294)A221.CB, (T0294)S244.CB) [> 3.3424 = 5.5706 < 7.2418] w=0.1552 to align
# Constraint # added constraint: constraint((T0294)A50.CB, (T0294)A73.CB) [> 3.7481 = 6.2469 < 8.1209] w=0.1533 to align
# Constraint # added constraint: constraint((T0294)I85.CB, (T0294)L326.CB) [> 3.3384 = 5.5640 < 7.2333] w=0.1533 to align
# Constraint # added constraint: constraint((T0294)D86.CB, (T0294)R245.CB) [> 4.0480 = 6.7466 < 8.7706] w=0.1533 to align
# Constraint # added constraint: constraint((T0294)L258.CB, (T0294)L282.CB) [> 4.4759 = 7.4597 < 9.6977] w=0.1533 to align
# Constraint # added constraint: constraint((T0294)L107.CB, (T0294)T298.CB) [> 4.0576 = 6.7627 < 8.7916] w=0.1533 to align
# Constraint # added constraint: constraint((T0294)A129.CB, (T0294)L146.CB) [> 3.1119 = 5.1864 < 6.7423] w=0.1533 to align
# Constraint # added constraint: constraint((T0294)G267.CA, (T0294)L291.CB) [> 4.6169 = 7.6949 < 10.0033] w=0.1533 to align
# Constraint # added constraint: constraint((T0294)D109.CB, (T0294)T301.CB) [> 4.1829 = 6.9715 < 9.0630] w=0.1533 to align
# Constraint # added constraint: constraint((T0294)L126.CB, (T0294)V289.CB) [> 3.7102 = 6.1837 < 8.0388] w=0.1528 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)L23.CB) [> 4.2160 = 7.0267 < 9.1348] w=0.1527 to align
# Constraint # added constraint: constraint((T0294)T111.CB, (T0294)I294.CB) [> 3.1031 = 5.1719 < 6.7235] w=0.1526 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)L291.CB) [> 3.7654 = 6.2756 < 8.1582] w=0.1503 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)A264.CB) [> 4.1103 = 6.8505 < 8.9057] w=0.1467 to align
# Constraint # added constraint: constraint((T0294)T121.CB, (T0294)L146.CB) [> 3.8828 = 6.4714 < 8.4128] w=0.1464 to align
# Constraint # added constraint: constraint((T0294)N311.CB, (T0294)P323.CB) [> 4.1121 = 6.8534 < 8.9094] w=0.1451 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)S60.CB) [> 3.6440 = 6.0734 < 7.8954] w=0.1446 to align
# Constraint # added constraint: constraint((T0294)I15.CB, (T0294)L58.CB) [> 3.5798 = 5.9663 < 7.7562] w=0.1443 to align
# Constraint # added constraint: constraint((T0294)E32.CB, (T0294)H53.CB) [> 3.3355 = 5.5592 < 7.2270] w=0.1443 to align
# Constraint # added constraint: constraint((T0294)C57.CB, (T0294)V77.CB) [> 3.8026 = 6.3377 < 8.2390] w=0.1441 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)A206.CB) [> 4.3874 = 7.3123 < 9.5060] w=0.1429 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)S217.CB) [> 4.0729 = 6.7881 < 8.8245] w=0.1427 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)L317.CB) [> 4.1476 = 6.9127 < 8.9865] w=0.1421 to align
# Constraint # added constraint: constraint((T0294)A27.CB, (T0294)A310.CB) [> 4.4078 = 7.3463 < 9.5501] w=0.1419 to align
# Constraint # added constraint: constraint((T0294)T80.CB, (T0294)I93.CB) [> 3.7933 = 6.3221 < 8.2187] w=0.1411 to align
# Constraint # added constraint: constraint((T0294)L120.CB, (T0294)F211.CB) [> 4.4809 = 7.4681 < 9.7086] w=0.1411 to align
# Constraint # added constraint: constraint((T0294)A238.CB, (T0294)V289.CB) [> 4.4664 = 7.4439 < 9.6771] w=0.1396 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)C288.CB) [> 3.7989 = 6.3316 < 8.2310] w=0.1390 to align
# Constraint # added constraint: constraint((T0294)L126.CB, (T0294)V239.CB) [> 3.2511 = 5.4185 < 7.0441] w=0.1390 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)C147.CB) [> 3.7705 = 6.2842 < 8.1695] w=0.1379 to align
# Constraint # added constraint: constraint((T0294)V239.CB, (T0294)I290.CB) [> 4.5861 = 7.6434 < 9.9365] w=0.1366 to align
# Constraint # added constraint: constraint((T0294)I15.CB, (T0294)L56.CB) [> 3.8358 = 6.3930 < 8.3109] w=0.1362 to align
# Constraint # added constraint: constraint((T0294)K76.CB, (T0294)G316.CA) [> 4.3777 = 7.2962 < 9.4851] w=0.1356 to align
# Constraint # added constraint: constraint((T0294)L59.CB, (T0294)I78.CB) [> 4.0753 = 6.7921 < 8.8297] w=0.1356 to align
# Constraint # added constraint: constraint((T0294)R14.CB, (T0294)Q33.CB) [> 3.6920 = 6.1533 < 7.9993] w=0.1353 to align
# Constraint # added constraint: constraint((T0294)L120.CB, (T0294)V213.CB) [> 4.3223 = 7.2039 < 9.3650] w=0.1336 to align
# Constraint # added constraint: constraint((T0294)L6.CB, (T0294)E30.CB) [> 3.6527 = 6.0878 < 7.9142] w=0.1329 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)L291.CB) [> 3.6141 = 6.0236 < 7.8306] w=0.1281 to align
# Constraint # added constraint: constraint((T0294)G84.CA, (T0294)S217.CB) [> 3.9308 = 6.5514 < 8.5168] w=0.1278 to align
# Constraint # added constraint: constraint((T0294)D86.CB, (T0294)S217.CB) [> 4.0768 = 6.7947 < 8.8331] w=0.1278 to align
# Constraint # added constraint: constraint((T0294)D86.CB, (T0294)L218.CB) [> 2.7654 = 4.6090 < 5.9917] w=0.1278 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)D269.CB) [> 4.6723 = 7.7872 < 10.1234] w=0.1278 to align
# Constraint # added constraint: constraint((T0294)L45.CB, (T0294)D61.CB) [> 3.8577 = 6.4294 < 8.3583] w=0.1278 to align
# Constraint # added constraint: constraint((T0294)R14.CB, (T0294)L58.CB) [> 4.1562 = 6.9270 < 9.0051] w=0.1277 to align
# Constraint # added constraint: constraint((T0294)G162.CA, (T0294)C216.CB) [> 4.2789 = 7.1315 < 9.2710] w=0.1273 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)I294.CB) [> 3.5303 = 5.8838 < 7.6489] w=0.1270 to align
# Constraint # added constraint: constraint((T0294)V116.CB, (T0294)R163.CB) [> 3.9952 = 6.6586 < 8.6562] w=0.1270 to align
# Constraint # added constraint: constraint((T0294)L120.CB, (T0294)V156.CB) [> 4.5379 = 7.5631 < 9.8321] w=0.1270 to align
# Constraint # added constraint: constraint((T0294)V116.CB, (T0294)V213.CB) [> 4.5129 = 7.5215 < 9.7780] w=0.1258 to align
# Constraint # added constraint: constraint((T0294)T12.CB, (T0294)I67.CB) [> 4.1958 = 6.9930 < 9.0909] w=0.1245 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)V289.CB) [> 3.9710 = 6.6184 < 8.6039] w=0.1245 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)Q33.CB) [> 3.8344 = 6.3906 < 8.3078] w=0.1240 to align
# Constraint # added constraint: constraint((T0294)L276.CB, (T0294)P292.CB) [> 3.7377 = 6.2295 < 8.0984] w=0.1226 to align
# Constraint # added constraint: constraint((T0294)L276.CB, (T0294)I290.CB) [> 3.7896 = 6.3160 < 8.2108] w=0.1225 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)S79.CB) [> 3.8349 = 6.3915 < 8.3089] w=0.1203 to align
# Constraint # added constraint: constraint((T0294)E132.CB, (T0294)K142.CB) [> 4.3177 = 7.1962 < 9.3550] w=0.1193 to align
# Constraint # added constraint: constraint((T0294)M81.CB, (T0294)L90.CB) [> 4.3148 = 7.1913 < 9.3487] w=0.1192 to align
# Constraint # added constraint: constraint((T0294)Q251.CB, (T0294)P273.CB) [> 4.3284 = 7.2139 < 9.3781] w=0.1188 to align
# Constraint # added constraint: constraint((T0294)M7.CB, (T0294)G54.CA) [> 4.1382 = 6.8970 < 8.9661] w=0.1183 to align
# Constraint # added constraint: constraint((T0294)V106.CB, (T0294)R302.CB) [> 4.5233 = 7.5388 < 9.8004] w=0.1183 to align
# Constraint # added constraint: constraint((T0294)C226.CB, (T0294)A257.CB) [> 4.1020 = 6.8367 < 8.8878] w=0.1177 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)N242.CB) [> 4.4822 = 7.4704 < 9.7115] w=0.1177 to align
# Constraint # added constraint: constraint((T0294)S244.CB, (T0294)D269.CB) [> 4.0514 = 6.7523 < 8.7780] w=0.1173 to align
# Constraint # added constraint: constraint((T0294)L90.CB, (T0294)G101.CA) [> 3.9955 = 6.6592 < 8.6570] w=0.1153 to align
# Constraint # added constraint: constraint((T0294)E274.CB, (T0294)P292.CB) [> 4.2210 = 7.0351 < 9.1456] w=0.1141 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)A265.CB) [> 4.1009 = 6.8348 < 8.8853] w=0.1141 to align
# Constraint # added constraint: constraint((T0294)V239.CB, (T0294)L291.CB) [> 3.8783 = 6.4638 < 8.4029] w=0.1140 to align
# Constraint # added constraint: constraint((T0294)A238.CB, (T0294)C288.CB) [> 2.9654 = 4.9423 < 6.4250] w=0.1140 to align
# Constraint # added constraint: constraint((T0294)T237.CB, (T0294)C288.CB) [> 4.6565 = 7.7609 < 10.0892] w=0.1140 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)C288.CB) [> 3.3961 = 5.6601 < 7.3582] w=0.1140 to align
# Constraint # added constraint: constraint((T0294)M7.CB, (T0294)L317.CB) [> 3.7444 = 6.2407 < 8.1130] w=0.1138 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)M81.CB) [> 4.0587 = 6.7645 < 8.7939] w=0.1118 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)S79.CB) [> 4.1142 = 6.8570 < 8.9141] w=0.1118 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)I78.CB) [> 3.4679 = 5.7799 < 7.5138] w=0.1118 to align
# Constraint # added constraint: constraint((T0294)G84.CA, (T0294)P104.CB) [> 4.3744 = 7.2906 < 9.4778] w=0.1107 to align
# Constraint # added constraint: constraint((T0294)G84.CA, (T0294)R245.CB) [> 4.2693 = 7.1155 < 9.2501] w=0.1107 to align
# Constraint # added constraint: constraint((T0294)C57.CB, (T0294)A309.CB) [> 3.6439 = 6.0731 < 7.8950] w=0.1107 to align
# Constraint # added constraint: constraint((T0294)A26.CB, (T0294)L313.CB) [> 4.3162 = 7.1936 < 9.3517] w=0.1105 to align
# Constraint # added constraint: constraint((T0294)A26.CB, (T0294)L317.CB) [> 3.9879 = 6.6465 < 8.6404] w=0.1103 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)H293.CB) [> 3.3037 = 5.5061 < 7.1580] w=0.1100 to align
# Constraint # added constraint: constraint((T0294)Q33.CB, (T0294)H53.CB) [> 4.1120 = 6.8533 < 8.9093] w=0.1100 to align
# Constraint # added constraint: constraint((T0294)Q33.CB, (T0294)G54.CA) [> 3.2168 = 5.3613 < 6.9697] w=0.1100 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)H293.CB) [> 4.1788 = 6.9647 < 9.0541] w=0.1100 to align
# Constraint # added constraint: constraint((T0294)C147.CB, (T0294)T237.CB) [> 3.2833 = 5.4721 < 7.1138] w=0.1086 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)A265.CB) [> 3.7102 = 6.1836 < 8.0387] w=0.1065 to align
# Constraint # added constraint: constraint((T0294)K8.CB, (T0294)L75.CB) [> 3.0975 = 5.1626 < 6.7113] w=0.1043 to align
# Constraint # added constraint: constraint((T0294)T219.CB, (T0294)N250.CB) [> 3.2451 = 5.4085 < 7.0311] w=0.1043 to align
# Constraint # added constraint: constraint((T0294)M7.CB, (T0294)K76.CB) [> 3.3884 = 5.6473 < 7.3415] w=0.1033 to align
# Constraint # added constraint: constraint((T0294)K8.CB, (T0294)K76.CB) [> 3.3598 = 5.5997 < 7.2796] w=0.1033 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)I78.CB) [> 4.1454 = 6.9089 < 8.9816] w=0.1033 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)S79.CB) [> 3.0503 = 5.0838 < 6.6090] w=0.1033 to align
# Constraint # added constraint: constraint((T0294)T271.CB, (T0294)H280.CB) [> 3.7068 = 6.1780 < 8.0314] w=0.1022 to align
# Constraint # added constraint: constraint((T0294)L107.CB, (T0294)A297.CB) [> 4.5285 = 7.5476 < 9.8118] w=0.1022 to align
# Constraint # added constraint: constraint((T0294)T108.CB, (T0294)G165.CA) [> 4.5787 = 7.6312 < 9.9206] w=0.1022 to align
# Constraint # added constraint: constraint((T0294)T121.CB, (T0294)G267.CA) [> 4.4196 = 7.3661 < 9.5759] w=0.1022 to align
# Constraint # added constraint: constraint((T0294)G19.CA, (T0294)R302.CB) [> 4.1467 = 6.9112 < 8.9846] w=0.1022 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)S217.CB) [> 3.6195 = 6.0325 < 7.8422] w=0.1010 to align
# Constraint # added constraint: constraint((T0294)I15.CB, (T0294)V31.CB) [> 4.4957 = 7.4929 < 9.7408] w=0.1007 to align
# Constraint # added constraint: constraint((T0294)T183.CB, (T0294)C216.CB) [> 4.5917 = 7.6529 < 9.9487] w=0.1001 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)A297.CB) [> 3.9191 = 6.5318 < 8.4914] w=0.0992 to align
# Constraint # added constraint: constraint((T0294)L6.CB, (T0294)C29.CB) [> 4.1709 = 6.9515 < 9.0369] w=0.0989 to align
# Constraint # added constraint: constraint((T0294)T237.CB, (T0294)N287.CB) [> 3.8387 = 6.3979 < 8.3172] w=0.0970 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)K286.CB) [> 3.1929 = 5.3214 < 6.9179] w=0.0970 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)P273.CB) [> 2.9733 = 4.9555 < 6.4421] w=0.0960 to align
# Constraint # added constraint: constraint((T0294)P220.CB, (T0294)D247.CB) [> 4.3739 = 7.2899 < 9.4769] w=0.0958 to align
# Constraint # added constraint: constraint((T0294)M7.CB, (T0294)V77.CB) [> 3.7490 = 6.2484 < 8.1229] w=0.0958 to align
# Constraint # added constraint: constraint((T0294)T12.CB, (T0294)V49.CB) [> 3.4602 = 5.7670 < 7.4971] w=0.0937 to align
# Constraint # added constraint: constraint((T0294)V31.CB, (T0294)A52.CB) [> 3.1348 = 5.2247 < 6.7921] w=0.0932 to align
# Constraint # added constraint: constraint((T0294)V31.CB, (T0294)H53.CB) [> 4.1272 = 6.8787 < 8.9423] w=0.0932 to align
# Constraint # added constraint: constraint((T0294)Y149.CB, (T0294)T237.CB) [> 4.5989 = 7.6648 < 9.9643] w=0.0930 to align
# Constraint # added constraint: constraint((T0294)A24.CB, (T0294)G48.CA) [> 4.1006 = 6.8343 < 8.8846] w=0.0930 to align
# Constraint # added constraint: constraint((T0294)R14.CB, (T0294)L59.CB) [> 3.9327 = 6.5545 < 8.5208] w=0.0927 to align
# Constraint # added constraint: constraint((T0294)L90.CB, (T0294)D105.CB) [> 4.0613 = 6.7688 < 8.7995] w=0.0927 to align
# Constraint # added constraint: constraint((T0294)T12.CB, (T0294)S60.CB) [> 4.1014 = 6.8356 < 8.8863] w=0.0923 to align
# Constraint # added constraint: constraint((T0294)R5.CB, (T0294)C29.CB) [> 4.0931 = 6.8218 < 8.8683] w=0.0920 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)H293.CB) [> 4.2318 = 7.0530 < 9.1689] w=0.0900 to align
# Constraint # added constraint: constraint((T0294)S117.CB, (T0294)A309.CB) [> 4.5221 = 7.5369 < 9.7979] w=0.0900 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)K286.CB) [> 3.3749 = 5.6248 < 7.3123] w=0.0884 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)I290.CB) [> 4.4702 = 7.4503 < 9.6854] w=0.0879 to align
# Constraint # added constraint: constraint((T0294)L59.CB, (T0294)D86.CB) [> 4.2323 = 7.0538 < 9.1699] w=0.0852 to align
# Constraint # added constraint: constraint((T0294)S117.CB, (T0294)A297.CB) [> 4.3610 = 7.2684 < 9.4489] w=0.0851 to align
# Constraint # added constraint: constraint((T0294)R245.CB, (T0294)D269.CB) [> 3.4055 = 5.6758 < 7.3785] w=0.0842 to align
# Constraint # added constraint: constraint((T0294)G246.CA, (T0294)D269.CB) [> 4.3731 = 7.2885 < 9.4750] w=0.0842 to align
# Constraint # added constraint: constraint((T0294)L146.CB, (T0294)A265.CB) [> 4.3796 = 7.2993 < 9.4892] w=0.0836 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)S296.CB) [> 4.3019 = 7.1699 < 9.3209] w=0.0822 to align
# Constraint # added constraint: constraint((T0294)W138.CB, (T0294)T237.CB) [> 3.7699 = 6.2832 < 8.1682] w=0.0804 to align
# Constraint # added constraint: constraint((T0294)L283.CB, (T0294)P292.CB) [> 4.1206 = 6.8677 < 8.9279] w=0.0799 to align
# Constraint # added constraint: constraint((T0294)R245.CB, (T0294)S272.CB) [> 4.3169 = 7.1948 < 9.3532] w=0.0797 to align
# Constraint # added constraint: constraint((T0294)T108.CB, (T0294)G162.CA) [> 4.7592 = 7.9321 < 10.3117] w=0.0792 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)A264.CB) [> 4.1964 = 6.9939 < 9.0921] w=0.0786 to align
# Constraint # added constraint: constraint((T0294)V213.CB, (T0294)S244.CB) [> 3.7191 = 6.1986 < 8.0581] w=0.0781 to align
# Constraint # added constraint: constraint((T0294)G84.CA, (T0294)L218.CB) [> 4.6064 = 7.6774 < 9.9806] w=0.0767 to align
# Constraint # added constraint: constraint((T0294)V83.CB, (T0294)T108.CB) [> 4.0533 = 6.7555 < 8.7822] w=0.0767 to align
# Constraint # added constraint: constraint((T0294)S82.CB, (T0294)R245.CB) [> 3.6988 = 6.1647 < 8.0141] w=0.0767 to align
# Constraint # added constraint: constraint((T0294)L120.CB, (T0294)Y149.CB) [> 4.3495 = 7.2491 < 9.4239] w=0.0767 to align
# Constraint # added constraint: constraint((T0294)A169.CB, (T0294)V213.CB) [> 4.2279 = 7.0465 < 9.1605] w=0.0767 to align
# Constraint # added constraint: constraint((T0294)V4.CB, (T0294)C29.CB) [> 2.9687 = 4.9479 < 6.4323] w=0.0767 to align
# Constraint # added constraint: constraint((T0294)V4.CB, (T0294)D28.CB) [> 3.4322 = 5.7203 < 7.4364] w=0.0767 to align
# Constraint # added constraint: constraint((T0294)A112.CB, (T0294)G162.CA) [> 4.5216 = 7.5360 < 9.7968] w=0.0766 to align
# Constraint # added constraint: constraint((T0294)L126.CB, (T0294)L291.CB) [> 3.6287 = 6.0479 < 7.8623] w=0.0762 to align
# Constraint # added constraint: constraint((T0294)L6.CB, (T0294)D28.CB) [> 4.4570 = 7.4283 < 9.6568] w=0.0752 to align
# Constraint # added constraint: constraint((T0294)R5.CB, (T0294)E30.CB) [> 3.4818 = 5.8030 < 7.5439] w=0.0750 to align
# Constraint # added constraint: constraint((T0294)A169.CB, (T0294)E194.CB) [> 4.4169 = 7.3614 < 9.5698] w=0.0747 to align
# Constraint # added constraint: constraint((T0294)A238.CB, (T0294)A265.CB) [> 4.4550 = 7.4250 < 9.6525] w=0.0739 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)T80.CB) [> 4.3099 = 7.1831 < 9.3380] w=0.0739 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)S244.CB) [> 3.9764 = 6.6274 < 8.6157] w=0.0732 to align
# Constraint # added constraint: constraint((T0294)R245.CB, (T0294)P273.CB) [> 3.1870 = 5.3116 < 6.9051] w=0.0705 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)S244.CB) [> 4.3134 = 7.1891 < 9.3458] w=0.0703 to align
# Constraint # added constraint: constraint((T0294)T202.CB, (T0294)N227.CB) [> 4.6580 = 7.7633 < 10.0922] w=0.0686 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)L258.CB) [> 2.7378 = 4.5631 < 5.9320] w=0.0685 to align
# Constraint # added constraint: constraint((T0294)L90.CB, (T0294)L326.CB) [> 3.7316 = 6.2194 < 8.0852] w=0.0681 to align
# Constraint # added constraint: constraint((T0294)R245.CB, (T0294)H293.CB) [> 4.2873 = 7.1455 < 9.2892] w=0.0681 to align
# Constraint # added constraint: constraint((T0294)W141.CB, (T0294)V156.CB) [> 4.6901 = 7.8168 < 10.1619] w=0.0680 to align
# Constraint # added constraint: constraint((T0294)R185.CB, (T0294)T202.CB) [> 3.8742 = 6.4571 < 8.3942] w=0.0678 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)P273.CB) [> 3.7738 = 6.2896 < 8.1765] w=0.0674 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)I243.CB) [> 4.2570 = 7.0951 < 9.2236] w=0.0672 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)G261.CA) [> 3.7675 = 6.2791 < 8.1628] w=0.0663 to align
# Constraint # added constraint: constraint((T0294)Q251.CB, (T0294)G267.CA) [> 3.8028 = 6.3380 < 8.2394] w=0.0663 to align
# Constraint # added constraint: constraint((T0294)R14.CB, (T0294)V83.CB) [> 4.3411 = 7.2352 < 9.4057] w=0.0662 to align
# Constraint # added constraint: constraint((T0294)M7.CB, (T0294)V31.CB) [> 3.4072 = 5.6787 < 7.3823] w=0.0653 to align
# Constraint # added constraint: constraint((T0294)R245.CB, (T0294)P292.CB) [> 2.7995 = 4.6658 < 6.0656] w=0.0632 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)T271.CB) [> 4.3024 = 7.1707 < 9.3219] w=0.0630 to align
# Constraint # added constraint: constraint((T0294)W141.CB, (T0294)F211.CB) [> 4.1660 = 6.9433 < 9.0263] w=0.0627 to align
# Constraint # added constraint: constraint((T0294)G246.CA, (T0294)P273.CB) [> 4.5683 = 7.6139 < 9.8980] w=0.0625 to align
# Constraint # added constraint: constraint((T0294)W141.CB, (T0294)A238.CB) [> 3.8341 = 6.3901 < 8.3072] w=0.0622 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)N242.CB) [> 3.5140 = 5.8567 < 7.6137] w=0.0618 to align
# Constraint # added constraint: constraint((T0294)L146.CB, (T0294)A264.CB) [> 3.9118 = 6.5197 < 8.4757] w=0.0617 to align
# Constraint # added constraint: constraint((T0294)A215.CB, (T0294)R245.CB) [> 3.2360 = 5.3934 < 7.0114] w=0.0611 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)I78.CB) [> 4.1375 = 6.8959 < 8.9647] w=0.0607 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)T80.CB) [> 3.9221 = 6.5368 < 8.4978] w=0.0607 to align
# Constraint # added constraint: constraint((T0294)M81.CB, (T0294)R302.CB) [> 4.6269 = 7.7116 < 10.0250] w=0.0596 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)G148.CA) [> 4.3903 = 7.3172 < 9.5123] w=0.0596 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)V83.CB) [> 2.6265 = 4.3775 < 5.6908] w=0.0596 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)G295.CA) [> 4.7269 = 7.8782 < 10.2417] w=0.0596 to align
# Constraint # added constraint: constraint((T0294)C147.CB, (T0294)L268.CB) [> 4.1331 = 6.8886 < 8.9551] w=0.0594 to align
# Constraint # added constraint: constraint((T0294)L146.CB, (T0294)L268.CB) [> 2.9557 = 4.9261 < 6.4040] w=0.0594 to align
# Constraint # added constraint: constraint((T0294)C147.CB, (T0294)A265.CB) [> 4.5724 = 7.6207 < 9.9069] w=0.0593 to align
# Constraint # added constraint: constraint((T0294)P174.CB, (T0294)Q196.CB) [> 4.6272 = 7.7120 < 10.0256] w=0.0593 to align
# Constraint # added constraint: constraint((T0294)E30.CB, (T0294)H53.CB) [> 4.0235 = 6.7058 < 8.7175] w=0.0592 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)S244.CB) [> 4.2275 = 7.0458 < 9.1595] w=0.0580 to align
# Constraint # added constraint: constraint((T0294)Q251.CB, (T0294)A266.CB) [> 2.5704 = 4.2840 < 5.5691] w=0.0580 to align
# Constraint # added constraint: constraint((T0294)T237.CB, (T0294)A265.CB) [> 4.5980 = 7.6633 < 9.9623] w=0.0580 to align
# Constraint # added constraint: constraint((T0294)W145.CB, (T0294)D210.CB) [> 4.1065 = 6.8442 < 8.8975] w=0.0580 to align
# Constraint # added constraint: constraint((T0294)L55.CB, (T0294)G316.CA) [> 4.3151 = 7.1919 < 9.3494] w=0.0569 to align
# Constraint # added constraint: constraint((T0294)S244.CB, (T0294)H293.CB) [> 4.1526 = 6.9210 < 8.9973] w=0.0567 to align
# Constraint # added constraint: constraint((T0294)L126.CB, (T0294)W138.CB) [> 3.0743 = 5.1238 < 6.6610] w=0.0553 to align
# Constraint # added constraint: constraint((T0294)L126.CB, (T0294)I241.CB) [> 4.6072 = 7.6786 < 9.9822] w=0.0551 to align
# Constraint # added constraint: constraint((T0294)A129.CB, (T0294)K142.CB) [> 4.2320 = 7.0533 < 9.1692] w=0.0549 to align
# Constraint # added constraint: constraint((T0294)A264.CB, (T0294)V289.CB) [> 4.2369 = 7.0615 < 9.1800] w=0.0545 to align
# Constraint # added constraint: constraint((T0294)T271.CB, (T0294)T304.CB) [> 3.5590 = 5.9316 < 7.7111] w=0.0542 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)S82.CB) [> 3.7047 = 6.1745 < 8.0268] w=0.0541 to align
# Constraint # added constraint: constraint((T0294)A27.CB, (T0294)M322.CB) [> 3.8657 = 6.4428 < 8.3757] w=0.0541 to align
# Constraint # added constraint: constraint((T0294)S244.CB, (T0294)P273.CB) [> 3.3095 = 5.5159 < 7.1706] w=0.0539 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)P273.CB) [> 3.4694 = 5.7823 < 7.5170] w=0.0539 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)L258.CB) [> 3.4983 = 5.8306 < 7.5798] w=0.0537 to align
# Constraint # added constraint: constraint((T0294)F211.CB, (T0294)N242.CB) [> 3.7273 = 6.2121 < 8.0757] w=0.0536 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)I243.CB) [> 4.0204 = 6.7006 < 8.7108] w=0.0531 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)I243.CB) [> 4.5773 = 7.6289 < 9.9176] w=0.0531 to align
# Constraint # added constraint: constraint((T0294)G162.CA, (T0294)Q186.CB) [> 4.6039 = 7.6732 < 9.9752] w=0.0528 to align
# Constraint # added constraint: constraint((T0294)T12.CB, (T0294)M81.CB) [> 3.4207 = 5.7012 < 7.4115] w=0.0522 to align
# Constraint # added constraint: constraint((T0294)E274.CB, (T0294)I290.CB) [> 4.1766 = 6.9610 < 9.0492] w=0.0515 to align
# Constraint # added constraint: constraint((T0294)P16.CB, (T0294)H299.CB) [> 4.2539 = 7.0899 < 9.2168] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)L56.CB) [> 4.1597 = 6.9329 < 9.0128] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)V100.CB, (T0294)L328.CB) [> 3.7731 = 6.2886 < 8.1751] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)I85.CB, (T0294)S217.CB) [> 4.3007 = 7.1679 < 9.3182] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)S79.CB, (T0294)M322.CB) [> 4.5648 = 7.6079 < 9.8903] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)C147.CB, (T0294)N287.CB) [> 4.4357 = 7.3929 < 9.6107] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)E132.CB, (T0294)K286.CB) [> 4.0839 = 6.8065 < 8.8485] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)I130.CB, (T0294)K286.CB) [> 3.6216 = 6.0359 < 7.8467] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)S82.CB, (T0294)A297.CB) [> 4.4435 = 7.4059 < 9.6276] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)T108.CB, (T0294)R300.CB) [> 2.7483 = 4.5806 < 5.9548] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)R13.CB, (T0294)S79.CB) [> 3.9314 = 6.5523 < 8.5180] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)V4.CB, (T0294)A27.CB) [> 2.2448 = 3.7413 < 4.8637] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)L146.CB, (T0294)G267.CA) [> 4.0283 = 6.7138 < 8.7280] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)P277.CB) [> 4.2234 = 7.0390 < 9.1507] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)L172.CB, (T0294)A197.CB) [> 4.7336 = 7.8893 < 10.2561] w=0.0511 to align
# Constraint # added constraint: constraint((T0294)P277.CB, (T0294)I290.CB) [> 3.2558 = 5.4264 < 7.0543] w=0.0510 to align
# Constraint # added constraint: constraint((T0294)A42.CB, (T0294)G54.CA) [> 3.7536 = 6.2561 < 8.1329] w=0.0506 to align
# Constraint # added constraint: constraint((T0294)L23.CB, (T0294)L56.CB) [> 4.6212 = 7.7020 < 10.0126] w=0.0506 to align
# Constraint # added constraint: constraint((T0294)G162.CA, (T0294)S244.CB) [> 4.4144 = 7.3573 < 9.5645] w=0.0506 to align
# Constraint # added constraint: constraint((T0294)P143.CB, (T0294)T237.CB) [> 3.6390 = 6.0649 < 7.8844] w=0.0504 to align
# Constraint # added constraint: constraint((T0294)W145.CB, (T0294)S154.CB) [> 2.5170 = 4.1950 < 5.4535] w=0.0504 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)F231.CB) [> 4.2655 = 7.1092 < 9.2420] w=0.0503 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)V270.CB) [> 3.6974 = 6.1623 < 8.0110] w=0.0494 to align
# Constraint # added constraint: constraint((T0294)E223.CB, (T0294)G246.CA) [> 4.0024 = 6.6706 < 8.6718] w=0.0492 to align
# Constraint # added constraint: constraint((T0294)A22.CB, (T0294)M81.CB) [> 4.1702 = 6.9503 < 9.0354] w=0.0492 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)E30.CB) [> 3.1160 = 5.1934 < 6.7514] w=0.0484 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)F230.CB) [> 4.1569 = 6.9282 < 9.0066] w=0.0482 to align
# Constraint # added constraint: constraint((T0294)C147.CB, (T0294)V289.CB) [> 3.2253 = 5.3755 < 6.9881] w=0.0482 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)S296.CB) [> 4.4300 = 7.3834 < 9.5984] w=0.0482 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)A297.CB) [> 3.8587 = 6.4312 < 8.3606] w=0.0482 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)H293.CB) [> 2.8815 = 4.8026 < 6.2433] w=0.0482 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)S296.CB) [> 3.9438 = 6.5730 < 8.5449] w=0.0482 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)A297.CB) [> 4.1382 = 6.8970 < 8.9661] w=0.0482 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)A297.CB) [> 2.9857 = 4.9761 < 6.4689] w=0.0482 to align
# Constraint # added constraint: constraint((T0294)T237.CB, (T0294)V289.CB) [> 4.0780 = 6.7966 < 8.8356] w=0.0459 to align
# Constraint # added constraint: constraint((T0294)W138.CB, (T0294)V239.CB) [> 2.9691 = 4.9485 < 6.4331] w=0.0457 to align
# Constraint # added constraint: constraint((T0294)W138.CB, (T0294)F211.CB) [> 4.3503 = 7.2506 < 9.4257] w=0.0457 to align
# Constraint # added constraint: constraint((T0294)K94.CB, (T0294)V106.CB) [> 4.2503 = 7.0839 < 9.2091] w=0.0453 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)F240.CB) [> 3.0591 = 5.0986 < 6.6282] w=0.0451 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)S244.CB) [> 3.0816 = 5.1361 < 6.6769] w=0.0451 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)N242.CB) [> 3.7002 = 6.1669 < 8.0170] w=0.0451 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)A169.CB) [> 4.7255 = 7.8759 < 10.2386] w=0.0440 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)A266.CB) [> 4.4912 = 7.4853 < 9.7309] w=0.0440 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)F231.CB) [> 4.1687 = 6.9478 < 9.0322] w=0.0439 to align
# Constraint # added constraint: constraint((T0294)L146.CB, (T0294)V239.CB) [> 3.5482 = 5.9136 < 7.6877] w=0.0433 to align
# Constraint # added constraint: constraint((T0294)L90.CB, (T0294)L328.CB) [> 3.6579 = 6.0965 < 7.9255] w=0.0426 to align
# Constraint # added constraint: constraint((T0294)G97.CA, (T0294)L328.CB) [> 4.6170 = 7.6950 < 10.0035] w=0.0426 to align
# Constraint # added constraint: constraint((T0294)R99.CB, (T0294)L328.CB) [> 3.4680 = 5.7799 < 7.5139] w=0.0426 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)E30.CB) [> 4.2631 = 7.1051 < 9.2366] w=0.0426 to align
# Constraint # added constraint: constraint((T0294)C57.CB, (T0294)I98.CB) [> 4.5863 = 7.6439 < 9.9371] w=0.0426 to align
# Constraint # added constraint: constraint((T0294)T237.CB, (T0294)V270.CB) [> 4.4765 = 7.4609 < 9.6991] w=0.0426 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)T278.CB) [> 4.3878 = 7.3130 < 9.5069] w=0.0426 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)N279.CB) [> 3.7815 = 6.3025 < 8.1933] w=0.0426 to align
# Constraint # added constraint: constraint((T0294)R245.CB, (T0294)T298.CB) [> 3.9792 = 6.6319 < 8.6215] w=0.0426 to align
# Constraint # added constraint: constraint((T0294)G295.CA, (T0294)M305.CB) [> 3.4101 = 5.6835 < 7.3885] w=0.0425 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)D269.CB) [> 4.5755 = 7.6258 < 9.9136] w=0.0421 to align
# Constraint # added constraint: constraint((T0294)G246.CA, (T0294)P275.CB) [> 4.1429 = 6.9048 < 8.9762] w=0.0421 to align
# Constraint # added constraint: constraint((T0294)A215.CB, (T0294)N242.CB) [> 3.4113 = 5.6855 < 7.3912] w=0.0421 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)L23.CB) [> 3.4644 = 5.7740 < 7.5062] w=0.0413 to align
# Constraint # added constraint: constraint((T0294)L6.CB, (T0294)H53.CB) [> 3.5509 = 5.9181 < 7.6935] w=0.0412 to align
# Constraint # added constraint: constraint((T0294)R5.CB, (T0294)H53.CB) [> 3.5238 = 5.8729 < 7.6348] w=0.0412 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)V270.CB) [> 3.2154 = 5.3590 < 6.9667] w=0.0411 to align
# Constraint # added constraint: constraint((T0294)G19.CA, (T0294)M81.CB) [> 4.1602 = 6.9336 < 9.0137] w=0.0406 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)N242.CB) [> 3.2920 = 5.4868 < 7.1328] w=0.0401 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)V289.CB) [> 4.5898 = 7.6496 < 9.9445] w=0.0393 to align
# Constraint # added constraint: constraint((T0294)I130.CB, (T0294)W145.CB) [> 4.0043 = 6.6738 < 8.6759] w=0.0379 to align
# Constraint # added constraint: constraint((T0294)R185.CB, (T0294)S201.CB) [> 4.5538 = 7.5896 < 9.8665] w=0.0377 to align
# Constraint # added constraint: constraint((T0294)L276.CB, (T0294)L291.CB) [> 4.1264 = 6.8774 < 8.9406] w=0.0374 to align
# Constraint # added constraint: constraint((T0294)A26.CB, (T0294)P323.CB) [> 3.7595 = 6.2658 < 8.1456] w=0.0371 to align
# Constraint # added constraint: constraint((T0294)L23.CB, (T0294)M322.CB) [> 2.1373 = 3.5622 < 4.6308] w=0.0371 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)T271.CB) [> 4.2342 = 7.0570 < 9.1741] w=0.0369 to align
# Constraint # added constraint: constraint((T0294)D91.CB, (T0294)S217.CB) [> 4.2758 = 7.1264 < 9.2643] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)L146.CB, (T0294)I241.CB) [> 4.6925 = 7.8209 < 10.1672] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)A129.CB, (T0294)V289.CB) [> 3.8477 = 6.4129 < 8.3368] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)A129.CB, (T0294)P143.CB) [> 2.4755 = 4.1259 < 5.3637] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)L283.CB) [> 4.2486 = 7.0809 < 9.2052] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)S117.CB, (T0294)I294.CB) [> 3.4299 = 5.7165 < 7.4314] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)S117.CB, (T0294)H293.CB) [> 4.1826 = 6.9710 < 9.0623] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)D269.CB, (T0294)T284.CB) [> 4.2495 = 7.0825 < 9.2073] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)G267.CA, (T0294)L283.CB) [> 3.2692 = 5.4486 < 7.0832] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)C147.CB, (T0294)L282.CB) [> 4.5306 = 7.5510 < 9.8163] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)S272.CB, (T0294)K286.CB) [> 4.7193 = 7.8656 < 10.2252] w=0.0341 to align
# Constraint # added constraint: constraint((T0294)R245.CB, (T0294)I294.CB) [> 4.1114 = 6.8524 < 8.9081] w=0.0340 to align
# Constraint # added constraint: constraint((T0294)I294.CB, (T0294)M305.CB) [> 2.8370 = 4.7284 < 6.1469] w=0.0340 to align
# Constraint # added constraint: constraint((T0294)I85.CB, (T0294)G162.CA) [> 2.6352 = 4.3920 < 5.7095] w=0.0338 to align
# Constraint # added constraint: constraint((T0294)G84.CA, (T0294)R163.CB) [> 3.9880 = 6.6466 < 8.6406] w=0.0338 to align
# Constraint # added constraint: constraint((T0294)L144.CB, (T0294)S154.CB) [> 4.0740 = 6.7900 < 8.8270] w=0.0336 to align
# Constraint # added constraint: constraint((T0294)W145.CB, (T0294)V156.CB) [> 4.1874 = 6.9790 < 9.0727] w=0.0336 to align
# Constraint # added constraint: constraint((T0294)W145.CB, (T0294)F211.CB) [> 4.3186 = 7.1976 < 9.3569] w=0.0336 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)V270.CB) [> 4.6391 = 7.7318 < 10.0513] w=0.0336 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)V270.CB) [> 4.2914 = 7.1523 < 9.2980] w=0.0336 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)R245.CB) [> 3.7719 = 6.2864 < 8.1723] w=0.0336 to align
# Constraint # added constraint: constraint((T0294)G148.CA, (T0294)T237.CB) [> 4.2954 = 7.1590 < 9.3067] w=0.0334 to align
# Constraint # added constraint: constraint((T0294)G162.CA, (T0294)G184.CA) [> 4.7161 = 7.8601 < 10.2181] w=0.0332 to align
# Constraint # added constraint: constraint((T0294)L55.CB, (T0294)R99.CB) [> 4.5179 = 7.5299 < 9.7889] w=0.0327 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)R99.CB) [> 3.2837 = 5.4728 < 7.1147] w=0.0327 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)I98.CB) [> 2.7399 = 4.5665 < 5.9364] w=0.0327 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)V100.CB) [> 4.6259 = 7.7099 < 10.0229] w=0.0327 to align
# Constraint # added constraint: constraint((T0294)C57.CB, (T0294)V100.CB) [> 4.0439 = 6.7398 < 8.7618] w=0.0327 to align
# Constraint # added constraint: constraint((T0294)P174.CB, (T0294)T304.CB) [> 4.2789 = 7.1316 < 9.2710] w=0.0325 to align
# Constraint # added constraint: constraint((T0294)A264.CB, (T0294)P292.CB) [> 3.9905 = 6.6508 < 8.6460] w=0.0317 to align
# Constraint # added constraint: constraint((T0294)G136.CA, (T0294)V289.CB) [> 3.7076 = 6.1794 < 8.0332] w=0.0313 to align
# Constraint # added constraint: constraint((T0294)A215.CB, (T0294)I241.CB) [> 4.5818 = 7.6363 < 9.9271] w=0.0311 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)A297.CB) [> 3.8944 = 6.4907 < 8.4379] w=0.0311 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)M81.CB) [> 3.7666 = 6.2776 < 8.1609] w=0.0294 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)T80.CB) [> 4.3313 = 7.2189 < 9.3845] w=0.0294 to align
# Constraint # added constraint: constraint((T0294)A129.CB, (T0294)W141.CB) [> 3.1288 = 5.2146 < 6.7790] w=0.0294 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)I243.CB) [> 4.3665 = 7.2775 < 9.4607] w=0.0281 to align
# Constraint # added constraint: constraint((T0294)G148.CA, (T0294)V239.CB) [> 4.2212 = 7.0353 < 9.1458] w=0.0273 to align
# Constraint # added constraint: constraint((T0294)S244.CB, (T0294)A264.CB) [> 4.2748 = 7.1247 < 9.2621] w=0.0270 to align
# Constraint # added constraint: constraint((T0294)N242.CB, (T0294)A264.CB) [> 3.8496 = 6.4161 < 8.3409] w=0.0270 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)A265.CB) [> 2.9181 = 4.8635 < 6.3225] w=0.0260 to align
# Constraint # added constraint: constraint((T0294)S244.CB, (T0294)A265.CB) [> 4.4478 = 7.4130 < 9.6369] w=0.0260 to align
# Constraint # added constraint: constraint((T0294)V83.CB, (T0294)G295.CA) [> 3.0695 = 5.1159 < 6.6507] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)L254.CB) [> 4.7696 = 7.9493 < 10.3341] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)A264.CB) [> 4.7525 = 7.9208 < 10.2970] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)I294.CB) [> 4.4970 = 7.4950 < 9.7435] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)S244.CB, (T0294)I294.CB) [> 3.9456 = 6.5761 < 8.5489] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)E113.CB, (T0294)G295.CA) [> 4.7268 = 7.8781 < 10.2415] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)V133.CB, (T0294)T298.CB) [> 2.8665 = 4.7774 < 6.2106] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)V133.CB, (T0294)T301.CB) [> 3.2559 = 5.4265 < 7.0545] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)G162.CA, (T0294)P220.CB) [> 3.7354 = 6.2257 < 8.0934] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)G162.CA, (T0294)I243.CB) [> 4.1541 = 6.9235 < 9.0006] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)G267.CA, (T0294)I294.CB) [> 4.0094 = 6.6824 < 8.6871] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)D269.CB, (T0294)T298.CB) [> 3.3533 = 5.5888 < 7.2655] w=0.0256 to align
# Constraint # added constraint: constraint((T0294)I85.CB, (T0294)L308.CB) [> 2.7018 = 4.5030 < 5.8539] w=0.0255 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)I85.CB) [> 3.5298 = 5.8831 < 7.6480] w=0.0255 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)G84.CA) [> 4.0915 = 6.8192 < 8.8649] w=0.0255 to align
# Constraint # added constraint: constraint((T0294)L55.CB, (T0294)I85.CB) [> 3.3409 = 5.5682 < 7.2387] w=0.0255 to align
# Constraint # added constraint: constraint((T0294)L55.CB, (T0294)G84.CA) [> 4.0628 = 6.7714 < 8.8028] w=0.0255 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)I85.CB) [> 3.3463 = 5.5771 < 7.2502] w=0.0255 to align
# Constraint # added constraint: constraint((T0294)T80.CB, (T0294)T108.CB) [> 4.7831 = 7.9719 < 10.3634] w=0.0255 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)F231.CB) [> 4.1985 = 6.9975 < 9.0968] w=0.0255 to align
# Constraint # added constraint: constraint((T0294)T219.CB, (T0294)D252.CB) [> 4.3963 = 7.3271 < 9.5253] w=0.0255 to align
# Constraint # added constraint: constraint((T0294)L126.CB, (T0294)Y149.CB) [> 3.7332 = 6.2221 < 8.0887] w=0.0252 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)L268.CB) [> 4.3642 = 7.2736 < 9.4557] w=0.0251 to align
# Constraint # added constraint: constraint((T0294)V239.CB, (T0294)L268.CB) [> 3.9248 = 6.5413 < 8.5036] w=0.0251 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)I241.CB) [> 2.8533 = 4.7555 < 6.1821] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)N242.CB) [> 3.7555 = 6.2592 < 8.1369] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)I158.CB, (T0294)I241.CB) [> 4.4258 = 7.3764 < 9.5893] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)I241.CB) [> 4.5423 = 7.5706 < 9.8418] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)I243.CB) [> 4.4971 = 7.4951 < 9.7436] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)R245.CB) [> 3.1831 = 5.3052 < 6.8967] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)F240.CB) [> 4.1929 = 6.9883 < 9.0847] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)N242.CB) [> 4.1293 = 6.8822 < 8.9469] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)I241.CB) [> 4.3336 = 7.2226 < 9.3894] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)F240.CB) [> 3.0633 = 5.1055 < 6.6372] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)V239.CB) [> 4.0844 = 6.8074 < 8.8496] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)V289.CB) [> 3.5545 = 5.9242 < 7.7014] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)V239.CB, (T0294)N287.CB) [> 3.4371 = 5.7285 < 7.4471] w=0.0250 to align
# Constraint # added constraint: constraint((T0294)L6.CB, (T0294)G54.CA) [> 4.4670 = 7.4450 < 9.6785] w=0.0249 to align
# Constraint # added constraint: constraint((T0294)A265.CB, (T0294)I294.CB) [> 4.0262 = 6.7104 < 8.7235] w=0.0246 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)A264.CB) [> 4.1597 = 6.9329 < 9.0128] w=0.0245 to align
# Constraint # added constraint: constraint((T0294)W145.CB, (T0294)T237.CB) [> 4.1184 = 6.8639 < 8.9231] w=0.0244 to align
# Constraint # added constraint: constraint((T0294)F211.CB, (T0294)A265.CB) [> 4.3515 = 7.2526 < 9.4283] w=0.0242 to align
# Constraint # added constraint: constraint((T0294)V49.CB, (T0294)R96.CB) [> 3.2147 = 5.3578 < 6.9652] w=0.0241 to align
# Constraint # added constraint: constraint((T0294)V133.CB, (T0294)I241.CB) [> 4.3737 = 7.2894 < 9.4762] w=0.0240 to align
# Constraint # added constraint: constraint((T0294)A42.CB, (T0294)V83.CB) [> 3.6092 = 6.0153 < 7.8199] w=0.0228 to align
# Constraint # added constraint: constraint((T0294)L45.CB, (T0294)G84.CA) [> 3.8138 = 6.3564 < 8.2633] w=0.0228 to align
# Constraint # added constraint: constraint((T0294)G150.CA, (T0294)V239.CB) [> 4.3246 = 7.2077 < 9.3699] w=0.0227 to align
# Constraint # added constraint: constraint((T0294)F211.CB, (T0294)T237.CB) [> 4.6700 = 7.7833 < 10.1183] w=0.0227 to align
# Constraint # added constraint: constraint((T0294)Y149.CB, (T0294)V289.CB) [> 3.8676 = 6.4460 < 8.3798] w=0.0226 to align
# Constraint # added constraint: constraint((T0294)S79.CB, (T0294)P104.CB) [> 2.8943 = 4.8239 < 6.2710] w=0.0226 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)V133.CB) [> 3.6720 = 6.1199 < 7.9559] w=0.0208 to align
# Constraint # added constraint: constraint((T0294)V213.CB, (T0294)A265.CB) [> 4.2880 = 7.1467 < 9.2907] w=0.0184 to align
# Constraint # added constraint: constraint((T0294)S244.CB, (T0294)A266.CB) [> 3.9645 = 6.6074 < 8.5897] w=0.0184 to align
# Constraint # added constraint: constraint((T0294)V133.CB, (T0294)V289.CB) [> 4.1313 = 6.8856 < 8.9512] w=0.0181 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)A27.CB) [> 2.4367 = 4.0611 < 5.2795] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)V133.CB, (T0294)L144.CB) [> 3.3461 = 5.5768 < 7.2498] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)A115.CB, (T0294)P292.CB) [> 2.9703 = 4.9504 < 6.4356] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)S117.CB, (T0294)L151.CB) [> 3.8242 = 6.3737 < 8.2858] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)L276.CB) [> 3.8814 = 6.4690 < 8.4098] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)G19.CA, (T0294)L56.CB) [> 4.7311 = 7.8852 < 10.2507] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)R302.CB) [> 4.2193 = 7.0321 < 9.1418] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)G162.CA, (T0294)R185.CB) [> 4.7234 = 7.8723 < 10.2340] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)V83.CB, (T0294)R245.CB) [> 4.6755 = 7.7926 < 10.1303] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)P292.CB) [> 4.6409 = 7.7347 < 10.0552] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)L254.CB, (T0294)G295.CA) [> 2.5608 = 4.2679 < 5.5483] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)A266.CB, (T0294)I294.CB) [> 4.4872 = 7.4787 < 9.7223] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)G267.CA, (T0294)G295.CA) [> 3.7002 = 6.1670 < 8.0172] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)G267.CA, (T0294)T298.CB) [> 3.8809 = 6.4681 < 8.4085] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)L285.CB) [> 3.9081 = 6.5135 < 8.4676] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)H53.CB, (T0294)V83.CB) [> 4.0412 = 6.7354 < 8.7560] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)V83.CB) [> 2.8650 = 4.7750 < 6.2075] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)G54.CA, (T0294)G84.CA) [> 3.6483 = 6.0805 < 7.9046] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)L55.CB, (T0294)V83.CB) [> 3.2548 = 5.4247 < 7.0522] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)D86.CB) [> 2.4943 = 4.1572 < 5.4044] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)T103.CB, (T0294)P174.CB) [> 3.6860 = 6.1434 < 7.9864] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)P281.CB, (T0294)G295.CA) [> 3.9410 = 6.5683 < 8.5389] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)V213.CB) [> 3.8484 = 6.4141 < 8.3383] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)H299.CB) [> 4.4028 = 7.3380 < 9.5394] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)I243.CB, (T0294)P292.CB) [> 4.1736 = 6.9559 < 9.0427] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)A27.CB, (T0294)H299.CB) [> 2.6615 = 4.4358 < 5.7666] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)R99.CB, (T0294)T298.CB) [> 4.4684 = 7.4473 < 9.6815] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)A169.CB, (T0294)T183.CB) [> 3.8040 = 6.3401 < 8.2421] w=0.0170 to align
# Constraint # added constraint: constraint((T0294)Y182.CB, (T0294)I212.CB) [> 4.6708 = 7.7846 < 10.1200] w=0.0168 to align
# Constraint # added constraint: constraint((T0294)A27.CB, (T0294)H53.CB) [> 4.4860 = 7.4767 < 9.7197] w=0.0168 to align
# Constraint # added constraint: constraint((T0294)L144.CB, (T0294)T237.CB) [> 4.1133 = 6.8555 < 8.9121] w=0.0168 to align
# Constraint # added constraint: constraint((T0294)P143.CB, (T0294)E236.CB) [> 4.1478 = 6.9130 < 8.9869] w=0.0168 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)V270.CB) [> 3.0765 = 5.1274 < 6.6657] w=0.0168 to align
# Constraint # added constraint: constraint((T0294)L181.CB, (T0294)V213.CB) [> 4.0011 = 6.6685 < 8.6691] w=0.0167 to align
# Constraint # added constraint: constraint((T0294)V213.CB, (T0294)F231.CB) [> 3.7709 = 6.2849 < 8.1703] w=0.0167 to align
# Constraint # added constraint: constraint((T0294)R185.CB, (T0294)V214.CB) [> 4.3025 = 7.1708 < 9.3221] w=0.0167 to align
# Constraint # added constraint: constraint((T0294)Y182.CB, (T0294)V213.CB) [> 3.6665 = 6.1108 < 7.9440] w=0.0167 to align
# Constraint # added constraint: constraint((T0294)H53.CB, (T0294)R99.CB) [> 4.7619 = 7.9365 < 10.3174] w=0.0166 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)L268.CB) [> 3.5703 = 5.9506 < 7.7357] w=0.0166 to align
# Constraint # added constraint: constraint((T0294)V213.CB, (T0294)V239.CB) [> 4.4700 = 7.4501 < 9.6851] w=0.0161 to align
# Constraint # added constraint: constraint((T0294)G157.CA, (T0294)V214.CB) [> 3.7160 = 6.1933 < 8.0512] w=0.0161 to align
# Constraint # added constraint: constraint((T0294)V156.CB, (T0294)V214.CB) [> 3.8917 = 6.4862 < 8.4320] w=0.0161 to align
# Constraint # added constraint: constraint((T0294)L268.CB, (T0294)I294.CB) [> 4.5321 = 7.5535 < 9.8196] w=0.0161 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)V239.CB) [> 4.2825 = 7.1376 < 9.2788] w=0.0151 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)N242.CB) [> 4.1450 = 6.9084 < 8.9809] w=0.0151 to align
# Constraint # added constraint: constraint((T0294)T12.CB, (T0294)S82.CB) [> 3.5599 = 5.9331 < 7.7131] w=0.0144 to align
# Constraint # added constraint: constraint((T0294)G148.CA, (T0294)A264.CB) [> 4.7133 = 7.8555 < 10.2121] w=0.0143 to align
# Constraint # added constraint: constraint((T0294)Q153.CB, (T0294)F211.CB) [> 4.1254 = 6.8756 < 8.9383] w=0.0143 to align
# Constraint # added constraint: constraint((T0294)R245.CB, (T0294)A266.CB) [> 3.5551 = 5.9251 < 7.7027] w=0.0123 to align
# Constraint # added constraint: constraint((T0294)H53.CB, (T0294)I78.CB) [> 4.4531 = 7.4218 < 9.6483] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)C57.CB, (T0294)A115.CB) [> 3.7056 = 6.1761 < 8.0289] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)D86.CB, (T0294)P292.CB) [> 4.0859 = 6.8098 < 8.8527] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)S79.CB, (T0294)R99.CB) [> 4.2275 = 7.0458 < 9.1595] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)T80.CB, (T0294)A115.CB) [> 3.4133 = 5.6888 < 7.3955] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)P104.CB, (T0294)L328.CB) [> 4.2312 = 7.0519 < 9.1675] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)I130.CB, (T0294)L144.CB) [> 4.0247 = 6.7078 < 8.7202] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)I241.CB, (T0294)P292.CB) [> 4.5219 = 7.5365 < 9.7975] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)K134.CB, (T0294)L144.CB) [> 3.6239 = 6.0398 < 7.8517] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)P273.CB) [> 4.2696 = 7.1160 < 9.2508] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)S82.CB) [> 4.3844 = 7.3074 < 9.4996] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)A264.CB) [> 3.5601 = 5.9336 < 7.7136] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)A264.CB) [> 2.8929 = 4.8215 < 6.2680] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)L56.CB, (T0294)V83.CB) [> 3.3367 = 5.5612 < 7.2296] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)A215.CB, (T0294)F240.CB) [> 4.1658 = 6.9429 < 9.0258] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)V83.CB) [> 3.5640 = 5.9399 < 7.7219] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)V11.CB, (T0294)S82.CB) [> 2.6450 = 4.4083 < 5.7308] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)F10.CB, (T0294)V83.CB) [> 4.8000 = 7.9999 < 10.3999] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)V9.CB, (T0294)M81.CB) [> 3.3606 = 5.6010 < 7.2813] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)S260.CB) [> 3.9955 = 6.6592 < 8.6570] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)T122.CB, (T0294)V156.CB) [> 4.4963 = 7.4939 < 9.7421] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)G150.CA, (T0294)F211.CB) [> 4.5437 = 7.5728 < 9.8446] w=0.0085 to align
# Constraint # added constraint: constraint((T0294)G148.CA, (T0294)F240.CB) [> 4.2647 = 7.1078 < 9.2401] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)R179.CB, (T0294)F211.CB) [> 4.3447 = 7.2412 < 9.4136] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)L181.CB, (T0294)F211.CB) [> 4.1058 = 6.8430 < 8.8959] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)L181.CB, (T0294)I212.CB) [> 2.9084 = 4.8473 < 6.3015] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)Y182.CB, (T0294)V214.CB) [> 4.6771 = 7.7952 < 10.1337] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)R179.CB) [> 4.6530 = 7.7550 < 10.0815] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)G160.CA, (T0294)R179.CB) [> 4.0298 = 6.7163 < 8.7311] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)L161.CB, (T0294)R179.CB) [> 3.5340 = 5.8900 < 7.6569] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)A265.CB) [> 3.9740 = 6.6234 < 8.6104] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)F240.CB, (T0294)D269.CB) [> 3.1060 = 5.1767 < 6.7297] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)T237.CB, (T0294)L268.CB) [> 4.5819 = 7.6365 < 9.9274] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)T237.CB, (T0294)G267.CA) [> 3.5290 = 5.8817 < 7.6462] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)T237.CB, (T0294)A266.CB) [> 4.6015 = 7.6692 < 9.9700] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)Q232.CB, (T0294)A265.CB) [> 3.6577 = 6.0961 < 7.9250] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)F231.CB, (T0294)A266.CB) [> 3.5392 = 5.8986 < 7.6682] w=0.0083 to align
# Constraint # added constraint: constraint((T0294)A215.CB, (T0294)V239.CB) [> 3.9891 = 6.6485 < 8.6430] w=0.0076 to align
# Constraint # added constraint: constraint((T0294)V213.CB, (T0294)R245.CB) [> 4.2364 = 7.0607 < 9.1789] w=0.0076 to align
# Constraint # added constraint: constraint((T0294)I212.CB, (T0294)S244.CB) [> 4.3717 = 7.2861 < 9.4720] w=0.0076 to align
# Constraint # added constraint: constraint((T0294)F211.CB, (T0294)I243.CB) [> 3.9411 = 6.5684 < 8.5389] w=0.0076 to align
# Constraint # added constraint: constraint((T0294)I159.CB, (T0294)D269.CB) [> 4.1954 = 6.9922 < 9.0899] w=0.0075 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)A265.CB) [> 4.4616 = 7.4359 < 9.6667] w=0.0075 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)L268.CB) [> 4.4711 = 7.4518 < 9.6874] w=0.0075 to align
# Constraint # added constraint: constraint((T0294)V214.CB, (T0294)D269.CB) [> 2.1096 = 3.5160 < 4.5708] w=0.0075 to align
# Constraint # added constraint: constraint((T0294)A215.CB, (T0294)D269.CB) [> 4.1296 = 6.8827 < 8.9475] w=0.0075 to align
# Constraint # added constraint: constraint((T0294)S244.CB, (T0294)L268.CB) [> 3.9961 = 6.6602 < 8.6583] w=0.0075 to align
# Constraint # added constraint: constraint((T0294)A265.CB, (T0294)H293.CB) [> 2.3066 = 3.8444 < 4.9977] w=0.0075 to align
# Constraint # added constraint: constraint((T0294)G267.CA, (T0294)H293.CB) [> 4.4281 = 7.3802 < 9.5942] w=0.0075 to align
# Constraint # added constraint: constraint((T0294)L268.CB, (T0294)H293.CB) [> 2.3159 = 3.8599 < 5.0179] w=0.0075 to align
# SetCost created cost = 
#	( 1.0000 * align )
# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/constraints_v3/T0294/
# command:# reading script from file servers-clean.under
# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0294/decoys/
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_POPULUS_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_POPULUS_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_RECOM_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_RECOM_TS5
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS1
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS2
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS3
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS4
# ReadConformPDB reading from PDB file servers/3D-JIGSAW_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation 3D-JIGSAW_TS5
# ReadConformPDB reading from PDB file servers/3Dpro_TS1.pdb.gz looking for model 1
# choosing archetypes in rotamer library
# Found a chain break before 323
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS1
# ReadConformPDB reading from PDB file servers/3Dpro_TS2.pdb.gz looking for model 1
# Found a chain break before 326
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS2
# ReadConformPDB reading from PDB file servers/3Dpro_TS3.pdb.gz looking for model 1
# Found a chain break before 306
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS3
# ReadConformPDB reading from PDB file servers/3Dpro_TS4.pdb.gz looking for model 1
# Found a chain break before 321
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS4
# ReadConformPDB reading from PDB file servers/3Dpro_TS5.pdb.gz looking for model 1
# Found a chain break before 326
# copying to AlignedFragments data structure
# naming current conformation 3Dpro_TS5
# ReadConformPDB reading from PDB file servers/ABIpro_TS1.pdb.gz looking for model 1
# Found a chain break before 325
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS1
# ReadConformPDB reading from PDB file servers/ABIpro_TS2.pdb.gz looking for model 1
# Found a chain break before 320
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS2
# ReadConformPDB reading from PDB file servers/ABIpro_TS3.pdb.gz looking for model 1
# Found a chain break before 326
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS3
# ReadConformPDB reading from PDB file servers/ABIpro_TS4.pdb.gz looking for model 1
# Found a chain break before 313
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS4
# ReadConformPDB reading from PDB file servers/ABIpro_TS5.pdb.gz looking for model 1
# Found a chain break before 217
# copying to AlignedFragments data structure
# naming current conformation ABIpro_TS5
# ReadConformPDB reading from PDB file servers/BayesHH_TS1.pdb.gz looking for model 1
# Found a chain break before 223
# copying to AlignedFragments data structure
# naming current conformation BayesHH_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS1.pdb.gz looking for model 1
# Found a chain break before 323
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS1
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS2.pdb.gz looking for model 1
# Found a chain break before 277
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS2
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS3.pdb.gz looking for model 1
# Found a chain break before 242
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS3
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS4.pdb.gz looking for model 1
# Found a chain break before 246
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS4
# ReadConformPDB reading from PDB file servers/Bilab-ENABLE_TS5.pdb.gz looking for model 1
# Found a chain break before 299
# copying to AlignedFragments data structure
# naming current conformation Bilab-ENABLE_TS5
# ReadConformPDB reading from PDB file servers/CIRCLE_TS1.pdb.gz looking for model 1
# Found a chain break before 302
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS1
# ReadConformPDB reading from PDB file servers/CIRCLE_TS2.pdb.gz looking for model 1
# Found a chain break before 322
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS2
# ReadConformPDB reading from PDB file servers/CIRCLE_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation CIRCLE_TS3
# ReadConformPDB reading from PDB file servers/CIRCLE_TS4.pdb.gz looking for model 1
# Found a chain break before 322
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS4
# ReadConformPDB reading from PDB file servers/CIRCLE_TS5.pdb.gz looking for model 1
# Found a chain break before 295
# copying to AlignedFragments data structure
# naming current conformation CIRCLE_TS5
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS1
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS2
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS3
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS4
# ReadConformPDB reading from PDB file servers/CaspIta-FOX_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation CaspIta-FOX_TS5
# ReadConformPDB reading from PDB file servers/Distill_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Distill_TS1
# ReadConformPDB reading from PDB file servers/Distill_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Distill_TS2
# ReadConformPDB reading from PDB file servers/Distill_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Distill_TS3
# ReadConformPDB reading from PDB file servers/Distill_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Distill_TS4
# ReadConformPDB reading from PDB file servers/Distill_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Distill_TS5
# ReadConformPDB reading from PDB file servers/FAMSD_TS1.pdb.gz looking for model 1
# Found a chain break before 277
# copying to AlignedFragments data structure
# naming current conformation FAMSD_TS1
# ReadConformPDB reading from PDB file servers/FAMSD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS2
# ReadConformPDB reading from PDB file servers/FAMSD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS3
# ReadConformPDB reading from PDB file servers/FAMSD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS4
# ReadConformPDB reading from PDB file servers/FAMSD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FAMSD_TS5
# ReadConformPDB reading from PDB file servers/FAMS_TS1.pdb.gz looking for model 1
# Found a chain break before 302
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS1
# ReadConformPDB reading from PDB file servers/FAMS_TS2.pdb.gz looking for model 1
# Found a chain break before 322
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS2
# ReadConformPDB reading from PDB file servers/FAMS_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FAMS_TS3
# ReadConformPDB reading from PDB file servers/FAMS_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FAMS_TS4
# ReadConformPDB reading from PDB file servers/FAMS_TS5.pdb.gz looking for model 1
# Found a chain break before 322
# copying to AlignedFragments data structure
# naming current conformation FAMS_TS5
# ReadConformPDB reading from PDB file servers/FOLDpro_TS1.pdb.gz looking for model 1
# Found a chain break before 293
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS1
# ReadConformPDB reading from PDB file servers/FOLDpro_TS2.pdb.gz looking for model 1
# Found a chain break before 299
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS2
# ReadConformPDB reading from PDB file servers/FOLDpro_TS3.pdb.gz looking for model 1
# Found a chain break before 255
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS3
# ReadConformPDB reading from PDB file servers/FOLDpro_TS4.pdb.gz looking for model 1
# Found a chain break before 214
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS4
# ReadConformPDB reading from PDB file servers/FOLDpro_TS5.pdb.gz looking for model 1
# Found a chain break before 300
# copying to AlignedFragments data structure
# naming current conformation FOLDpro_TS5
# ReadConformPDB reading from PDB file servers/FORTE1_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL1
# ReadConformPDB reading from PDB file servers/FORTE1_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL2
# ReadConformPDB reading from PDB file servers/FORTE1_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL3
# ReadConformPDB reading from PDB file servers/FORTE1_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL4
# ReadConformPDB reading from PDB file servers/FORTE1_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FORTE1_AL5
# ReadConformPDB reading from PDB file servers/FORTE2_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL1
# ReadConformPDB reading from PDB file servers/FORTE2_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL2
# ReadConformPDB reading from PDB file servers/FORTE2_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL3
# ReadConformPDB reading from PDB file servers/FORTE2_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL4
# ReadConformPDB reading from PDB file servers/FORTE2_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FORTE2_AL5
# ReadConformPDB reading from PDB file servers/FPSOLVER-SERVER_TS1.pdb.gz looking for model 1
# Found a chain break before 327
# copying to AlignedFragments data structure
# naming current conformation FPSOLVER-SERVER_TS1
# ReadConformPDB reading from PDB file servers/FUGMOD_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS1
# ReadConformPDB reading from PDB file servers/FUGMOD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS2
# ReadConformPDB reading from PDB file servers/FUGMOD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS3
# ReadConformPDB reading from PDB file servers/FUGMOD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS4
# ReadConformPDB reading from PDB file servers/FUGMOD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUGMOD_TS5
# ReadConformPDB reading from PDB file servers/FUGUE_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL1
# ReadConformPDB reading from PDB file servers/FUGUE_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL2
# ReadConformPDB reading from PDB file servers/FUGUE_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL3
# ReadConformPDB reading from PDB file servers/FUGUE_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL4
# ReadConformPDB reading from PDB file servers/FUGUE_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUGUE_AL5
# ReadConformPDB reading from PDB file servers/FUNCTION_TS1.pdb.gz looking for model 1
# Found a chain break before 318
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS1
# ReadConformPDB reading from PDB file servers/FUNCTION_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUNCTION_TS2
# ReadConformPDB reading from PDB file servers/FUNCTION_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation FUNCTION_TS3
# ReadConformPDB reading from PDB file servers/FUNCTION_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUNCTION_TS4
# ReadConformPDB reading from PDB file servers/FUNCTION_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation FUNCTION_TS5
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS1.pdb.gz looking for model 1
# Found a chain break before 246
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS1
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS2
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS3
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS4
# ReadConformPDB reading from PDB file servers/GeneSilicoMetaServer_TS5.pdb.gz looking for model 1
# Found a chain break before 320
# copying to AlignedFragments data structure
# naming current conformation GeneSilicoMetaServer_TS5
# ReadConformPDB reading from PDB file servers/HHpred1_TS1.pdb.gz looking for model 1
# Found a chain break before 293
# copying to AlignedFragments data structure
# naming current conformation HHpred1_TS1
# ReadConformPDB reading from PDB file servers/HHpred2_TS1.pdb.gz looking for model 1
# Found a chain break before 323
# copying to AlignedFragments data structure
# naming current conformation HHpred2_TS1
# ReadConformPDB reading from PDB file servers/HHpred3_TS1.pdb.gz looking for model 1
# Found a chain break before 323
# copying to AlignedFragments data structure
# naming current conformation HHpred3_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS1
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS2
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS3
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS4
# ReadConformPDB reading from PDB file servers/Huber-Torda-Server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Huber-Torda-Server_TS5
# ReadConformPDB reading from PDB file servers/LOOPP_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS1
# ReadConformPDB reading from PDB file servers/LOOPP_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS2
# ReadConformPDB reading from PDB file servers/LOOPP_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation LOOPP_TS3
# ReadConformPDB reading from PDB file servers/LOOPP_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS4
# ReadConformPDB reading from PDB file servers/LOOPP_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation LOOPP_TS5
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS1.pdb.gz looking for model 1
# Found a chain break before 214
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS1
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS2.pdb.gz looking for model 1
# Found a chain break before 214
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS2
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS3.pdb.gz looking for model 1
# Found a chain break before 293
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS3
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS4.pdb.gz looking for model 1
# Found a chain break before 272
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS4
# ReadConformPDB reading from PDB file servers/Ma-OPUS-server_TS5.pdb.gz looking for model 1
# Found a chain break before 319
# copying to AlignedFragments data structure
# naming current conformation Ma-OPUS-server_TS5
# ReadConformPDB reading from PDB file servers/MetaTasser_TS1.pdb.gz looking for model 1
# Found a chain break before 323
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS1
# ReadConformPDB reading from PDB file servers/MetaTasser_TS2.pdb.gz looking for model 1
# Found a chain break before 324
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS2
# ReadConformPDB reading from PDB file servers/MetaTasser_TS3.pdb.gz looking for model 1
# Found a chain break before 327
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS3
# ReadConformPDB reading from PDB file servers/MetaTasser_TS4.pdb.gz looking for model 1
# Found a chain break before 325
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS4
# ReadConformPDB reading from PDB file servers/MetaTasser_TS5.pdb.gz looking for model 1
# Found a chain break before 327
# copying to AlignedFragments data structure
# naming current conformation MetaTasser_TS5
# ReadConformPDB reading from PDB file servers/NN_PUT_lab_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation NN_PUT_lab_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS1.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS2.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS3.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS4.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO-AB_TS5.pdb.gz looking for model 1
# naming current conformation PROTINFO-AB_TS5
# ReadConformPDB reading from PDB file servers/PROTINFO_TS1.pdb.gz looking for model 1
# Found a chain break before 278
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS1
# ReadConformPDB reading from PDB file servers/PROTINFO_TS2.pdb.gz looking for model 1
# Found a chain break before 274
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS2
# ReadConformPDB reading from PDB file servers/PROTINFO_TS3.pdb.gz looking for model 1
# naming current conformation PROTINFO_TS3
# ReadConformPDB reading from PDB file servers/PROTINFO_TS4.pdb.gz looking for model 1
# Found a chain break before 276
# copying to AlignedFragments data structure
# naming current conformation PROTINFO_TS4
# ReadConformPDB reading from PDB file servers/PROTINFO_TS5.pdb.gz looking for model 1
# naming current conformation PROTINFO_TS5
# ReadConformPDB reading from PDB file servers/Pcons6_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS1
# ReadConformPDB reading from PDB file servers/Pcons6_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS2
# ReadConformPDB reading from PDB file servers/Pcons6_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS3
# ReadConformPDB reading from PDB file servers/Pcons6_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS4
# ReadConformPDB reading from PDB file servers/Pcons6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Pcons6_TS5
# ReadConformPDB reading from PDB file servers/Phyre-1_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Phyre-1_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS1
# ReadConformPDB reading from PDB file servers/Phyre-2_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS2
# ReadConformPDB reading from PDB file servers/Phyre-2_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS3
# ReadConformPDB reading from PDB file servers/Phyre-2_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS4
# ReadConformPDB reading from PDB file servers/Phyre-2_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Phyre-2_TS5
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS1
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS2
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation Pmodeller6_TS3
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS4
# ReadConformPDB reading from PDB file servers/Pmodeller6_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation Pmodeller6_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS1.pdb.gz looking for model 1
# Found a chain break before 214
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS2.pdb.gz looking for model 1
# Found a chain break before 293
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS3.pdb.gz looking for model 1
# Found a chain break before 320
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS4.pdb.gz looking for model 1
# Found a chain break before 320
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR-ACE_TS5.pdb.gz looking for model 1
# Found a chain break before 293
# copying to AlignedFragments data structure
# naming current conformation RAPTOR-ACE_TS5
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS1.pdb.gz looking for model 1
# Found a chain break before 272
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS1
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS2.pdb.gz looking for model 1
# Found a chain break before 85
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS2
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS3.pdb.gz looking for model 1
# Found a chain break before 291
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS3
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS4.pdb.gz looking for model 1
# Found a chain break before 272
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS4
# ReadConformPDB reading from PDB file servers/RAPTORESS_TS5.pdb.gz looking for model 1
# Found a chain break before 323
# copying to AlignedFragments data structure
# naming current conformation RAPTORESS_TS5
# ReadConformPDB reading from PDB file servers/RAPTOR_TS1.pdb.gz looking for model 1
# Found a chain break before 320
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS1
# ReadConformPDB reading from PDB file servers/RAPTOR_TS2.pdb.gz looking for model 1
# Found a chain break before 281
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS2
# ReadConformPDB reading from PDB file servers/RAPTOR_TS3.pdb.gz looking for model 1
# Found a chain break before 295
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS3
# ReadConformPDB reading from PDB file servers/RAPTOR_TS4.pdb.gz looking for model 1
# Found a chain break before 285
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS4
# ReadConformPDB reading from PDB file servers/RAPTOR_TS5.pdb.gz looking for model 1
# Found a chain break before 294
# copying to AlignedFragments data structure
# naming current conformation RAPTOR_TS5
# ReadConformPDB reading from PDB file servers/ROBETTA_TS1.pdb.gz looking for model 1
# Found a chain break before 138
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS1
# ReadConformPDB reading from PDB file servers/ROBETTA_TS2.pdb.gz looking for model 1
# Found a chain break before 71
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS2
# ReadConformPDB reading from PDB file servers/ROBETTA_TS3.pdb.gz looking for model 1
# Found a chain break before 294
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS3
# ReadConformPDB reading from PDB file servers/ROBETTA_TS4.pdb.gz looking for model 1
# Found a chain break before 188
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS4
# ReadConformPDB reading from PDB file servers/ROBETTA_TS5.pdb.gz looking for model 1
# Found a chain break before 185
# copying to AlignedFragments data structure
# naming current conformation ROBETTA_TS5
# ReadConformPDB reading from PDB file servers/ROKKY_TS1.pdb.gz looking for model 1
# Found a chain break before 242
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS1
# ReadConformPDB reading from PDB file servers/ROKKY_TS2.pdb.gz looking for model 1
# Found a chain break before 283
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS2
# ReadConformPDB reading from PDB file servers/ROKKY_TS3.pdb.gz looking for model 1
# Found a chain break before 242
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS3
# ReadConformPDB reading from PDB file servers/ROKKY_TS4.pdb.gz looking for model 1
# Found a chain break before 293
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS4
# ReadConformPDB reading from PDB file servers/ROKKY_TS5.pdb.gz looking for model 1
# Found a chain break before 274
# copying to AlignedFragments data structure
# naming current conformation ROKKY_TS5
# ReadConformPDB reading from PDB file servers/SAM-T02_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL1
# ReadConformPDB reading from PDB file servers/SAM-T02_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL2
# ReadConformPDB reading from PDB file servers/SAM-T02_AL3.pdb.gz looking for model 1
Skipped atom 431, because occupancy 1 <= existing 1.000 in servers/SAM-T02_AL3.pdb.gz
Skipped atom 440, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL3.pdb.gz
Skipped atom 757, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL3.pdb.gz
Skipped atom 1106, because occupancy 1.000 <= existing 1.000 in servers/SAM-T02_AL3.pdb.gz
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL3
# ReadConformPDB reading from PDB file servers/SAM-T02_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL4
# ReadConformPDB reading from PDB file servers/SAM-T02_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM-T02_AL5
# ReadConformPDB reading from PDB file servers/SAM-T99_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL1
# ReadConformPDB reading from PDB file servers/SAM-T99_AL2.pdb.gz looking for model 1
Skipped atom 39, because occupancy 1.000 <= existing 1.000 in servers/SAM-T99_AL2.pdb.gz
Skipped atom 420, because occupancy 1.000 <= existing 1.000 in servers/SAM-T99_AL2.pdb.gz
Skipped atom 429, because occupancy 1.000 <= existing 1.000 in servers/SAM-T99_AL2.pdb.gz
Skipped atom 838, because occupancy 1.000 <= existing 1.000 in servers/SAM-T99_AL2.pdb.gz
Skipped atom 895, because occupancy 1.000 <= existing 1.000 in servers/SAM-T99_AL2.pdb.gz
Skipped atom 1076, because occupancy 1.000 <= existing 1.000 in servers/SAM-T99_AL2.pdb.gz
Skipped atom 1097, because occupancy 1.000 <= existing 1.000 in servers/SAM-T99_AL2.pdb.gz
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL2
# ReadConformPDB reading from PDB file servers/SAM-T99_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL3
# ReadConformPDB reading from PDB file servers/SAM-T99_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL4
# ReadConformPDB reading from PDB file servers/SAM-T99_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM-T99_AL5
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS1.pdb.gz looking for model 1
# Found a chain break before 324
# copying to AlignedFragments data structure
# naming current conformation SAM_T06_server_TS1
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS2
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS3
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS4
# ReadConformPDB reading from PDB file servers/SAM_T06_server_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation SAM_T06_server_TS5
# ReadConformPDB reading from PDB file servers/SP3_TS1.pdb.gz looking for model 1
# Found a chain break before 242
# copying to AlignedFragments data structure
# naming current conformation SP3_TS1
# ReadConformPDB reading from PDB file servers/SP3_TS2.pdb.gz looking for model 1
# Found a chain break before 214
# copying to AlignedFragments data structure
# naming current conformation SP3_TS2
# ReadConformPDB reading from PDB file servers/SP3_TS3.pdb.gz looking for model 1
# Found a chain break before 293
# copying to AlignedFragments data structure
# naming current conformation SP3_TS3
# ReadConformPDB reading from PDB file servers/SP3_TS4.pdb.gz looking for model 1
# Found a chain break before 274
# copying to AlignedFragments data structure
# naming current conformation SP3_TS4
# ReadConformPDB reading from PDB file servers/SP3_TS5.pdb.gz looking for model 1
# Found a chain break before 320
# copying to AlignedFragments data structure
# naming current conformation SP3_TS5
# ReadConformPDB reading from PDB file servers/SP4_TS1.pdb.gz looking for model 1
# Found a chain break before 242
# copying to AlignedFragments data structure
# naming current conformation SP4_TS1
# ReadConformPDB reading from PDB file servers/SP4_TS2.pdb.gz looking for model 1
# Found a chain break before 296
# copying to AlignedFragments data structure
# naming current conformation SP4_TS2
# ReadConformPDB reading from PDB file servers/SP4_TS3.pdb.gz looking for model 1
# Found a chain break before 293
# copying to AlignedFragments data structure
# naming current conformation SP4_TS3
# ReadConformPDB reading from PDB file servers/SP4_TS4.pdb.gz looking for model 1
# Found a chain break before 246
# copying to AlignedFragments data structure
# naming current conformation SP4_TS4
# ReadConformPDB reading from PDB file servers/SP4_TS5.pdb.gz looking for model 1
# Found a chain break before 320
# copying to AlignedFragments data structure
# naming current conformation SP4_TS5
# ReadConformPDB reading from PDB file servers/SPARKS2_TS1.pdb.gz looking for model 1
# Found a chain break before 214
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS1
# ReadConformPDB reading from PDB file servers/SPARKS2_TS2.pdb.gz looking for model 1
# Found a chain break before 214
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS2
# ReadConformPDB reading from PDB file servers/SPARKS2_TS3.pdb.gz looking for model 1
# Found a chain break before 242
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS3
# ReadConformPDB reading from PDB file servers/SPARKS2_TS4.pdb.gz looking for model 1
# Found a chain break before 320
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS4
# ReadConformPDB reading from PDB file servers/SPARKS2_TS5.pdb.gz looking for model 1
# Found a chain break before 274
# copying to AlignedFragments data structure
# naming current conformation SPARKS2_TS5
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS2
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS3
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS4
# ReadConformPDB reading from PDB file servers/UNI-EID_bnmx_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation UNI-EID_bnmx_TS5
# ReadConformPDB reading from PDB file servers/UNI-EID_expm_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation UNI-EID_expm_TS1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL1
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL2.pdb.gz looking for model 1
Skipped atom 431, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz
Skipped atom 440, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz
Skipped atom 757, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz
Skipped atom 1106, because occupancy 1.000 <= existing 1.000 in servers/UNI-EID_sfst_AL2.pdb.gz
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL2
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL3
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL4
# ReadConformPDB reading from PDB file servers/UNI-EID_sfst_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation UNI-EID_sfst_AL5
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS1.pdb.gz looking for model 1
# Found a chain break before 293
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS1
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS2.pdb.gz looking for model 1
# Found a chain break before 295
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS2
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS3.pdb.gz looking for model 1
# Found a chain break before 319
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS3
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS4.pdb.gz looking for model 1
# Found a chain break before 280
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS4
# ReadConformPDB reading from PDB file servers/Zhang-Server_TS5.pdb.gz looking for model 1
# Found a chain break before 214
# copying to AlignedFragments data structure
# naming current conformation Zhang-Server_TS5
# ReadConformPDB reading from PDB file servers/beautshot_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation beautshot_TS1
# ReadConformPDB reading from PDB file servers/beautshotbase_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation beautshotbase_TS1
# ReadConformPDB reading from PDB file servers/forecast-s_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL1
# ReadConformPDB reading from PDB file servers/forecast-s_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL2
# ReadConformPDB reading from PDB file servers/forecast-s_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL3
# ReadConformPDB reading from PDB file servers/forecast-s_AL4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL4
# ReadConformPDB reading from PDB file servers/forecast-s_AL5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation forecast-s_AL5
# ReadConformPDB reading from PDB file servers/gtg_AL1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation gtg_AL1
# ReadConformPDB reading from PDB file servers/gtg_AL2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation gtg_AL2
# ReadConformPDB reading from PDB file servers/gtg_AL3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation gtg_AL3
# ReadConformPDB reading from PDB file servers/gtg_AL4.pdb.gz looking for model 1
Skipped atom 586, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL4.pdb.gz
Skipped atom 588, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL4.pdb.gz
Skipped atom 590, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL4.pdb.gz
Skipped atom 592, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL4.pdb.gz
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation gtg_AL4
# ReadConformPDB reading from PDB file servers/gtg_AL5.pdb.gz looking for model 1
Skipped atom 586, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz
Skipped atom 588, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz
Skipped atom 590, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz
Skipped atom 592, because occupancy 1.000 <= existing 1.000 in servers/gtg_AL5.pdb.gz
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation gtg_AL5
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS1.pdb.gz looking for model 1
# Found a chain break before 294
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS2.pdb.gz looking for model 1
# Found a chain break before 294
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS3.pdb.gz looking for model 1
# Found a chain break before 312
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS4.pdb.gz looking for model 1
# Found a chain break before 294
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv.2_TS5.pdb.gz looking for model 1
# Found a chain break before 323
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.2_TS5
# ReadConformPDB reading from PDB file servers/karypis.srv.4_TS1.pdb.gz looking for model 1
WARNING: atoms too close: (T0294)A52.O and (T0294)H53.N only 0.000 apart, marking (T0294)H53.N as missing
WARNING: atoms too close: (T0294)G72.O and (T0294)A73.N only 0.000 apart, marking (T0294)A73.N as missing
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation karypis.srv.4_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS1
# ReadConformPDB reading from PDB file servers/karypis.srv_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS2
# ReadConformPDB reading from PDB file servers/karypis.srv_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS3
# ReadConformPDB reading from PDB file servers/karypis.srv_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS4
# ReadConformPDB reading from PDB file servers/karypis.srv_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation karypis.srv_TS5
# ReadConformPDB reading from PDB file servers/keasar-server_TS1.pdb.gz looking for model 1
# Found a chain break before 157
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS1
# ReadConformPDB reading from PDB file servers/keasar-server_TS2.pdb.gz looking for model 1
# Found a chain break before 181
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS2
# ReadConformPDB reading from PDB file servers/keasar-server_TS3.pdb.gz looking for model 1
# Found a chain break before 241
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS3
# ReadConformPDB reading from PDB file servers/keasar-server_TS4.pdb.gz looking for model 1
# Found a chain break before 180
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS4
# ReadConformPDB reading from PDB file servers/keasar-server_TS5.pdb.gz looking for model 1
# Found a chain break before 213
# copying to AlignedFragments data structure
# naming current conformation keasar-server_TS5
# ReadConformPDB reading from PDB file servers/mGen-3D_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation mGen-3D_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS1
# ReadConformPDB reading from PDB file servers/nFOLD_TS2.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS2
# ReadConformPDB reading from PDB file servers/nFOLD_TS3.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS3
# ReadConformPDB reading from PDB file servers/nFOLD_TS4.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# naming current conformation nFOLD_TS4
# ReadConformPDB reading from PDB file servers/nFOLD_TS5.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation nFOLD_TS5
# ReadConformPDB reading from PDB file servers/shub_TS1.pdb.gz looking for model 1
# WARNING: incomplete conformation T0294 can't currently be optimized by undertaker
# copying to AlignedFragments data structure
# naming current conformation shub_TS1
# command:Using radius: 8.0000
Metaserver mode
NUMB_ALIGNS: 248
model score -0.4171
model score -0.4574
model score -0.4574
model score -0.4593
model score -0.4431
model score -0.4524
model score -0.4478
model score -0.4051
model score -0.3890
model score -0.4415
model score -0.3930
model score -0.3864
model score -0.4541
model score -0.4255
model score -0.3640
model score -0.4946
model score 1.0221
model score 1.5434
model score 1.6291
model score 2.0106
model score 1.5928
model score 1.7430
model score 1.7861
model score 1.6524
model score 1.6425
model score -0.3676
model score -0.3968
model score -0.4000
model score -0.3777
model score -0.2753
model score -0.2841
model score -0.4414
model score -0.4400
model score -0.4512
model score -0.4222
model score -0.4188
model score -0.3783
model score -0.3309
model score -0.4325
model score -0.4546
model score -0.4025
model score 1.2727
model score 1.2748
model score 1.2740
model score 1.2739
model score 1.2747
model score -0.3798
model score -0.3664
model score -0.4105
model score -0.4134
model score -0.4334
model score -0.4414
model score -0.4400
model score -0.4512
model score -0.4334
model score -0.4222
model score -0.5112
model score 0.7643
model score 1.3721
model score 0.6310
model score 2.0879
model score 1.2743
model score 1.2741
model score 1.2741
model score 1.2736
model score 1.2744
model score 1.2743
model score 1.2741
model score 1.2741
model score 1.2736
model score 1.2744
model score 2.4506
model score -0.3776
model score -0.4075
model score -0.3923
model score 0.9357
model score 1.0119
model score 1.2741
model score 1.2744
model score 1.2744
model score 1.2771
model score 1.2771
model score -0.4456
model score -0.3841
model score -0.4345
model score -0.4496
model score -0.4025
model score -0.4089
model score -0.4187
model score -0.4217
model score -0.4180
model score -0.4145
model score -0.4174
model score -0.3618
model score -0.3618
model score -0.3790
model score -0.3457
model score -0.3451
model score -0.3383
model score -0.3605
model score -0.4136
model score -0.4270
model score -0.4714
model score -0.4465
model score -0.4093
model score -0.3799
model score -0.4086
model score -0.4349
model score -0.3998
model score -0.4187
model score -0.3453
model score -0.3076
model score -0.3173
model score -0.3116
model score -0.2985
model score -0.4208
model score -0.3346
model score -0.3230
model score -0.3234
model score -0.3311
model score -0.3265
model score -0.3715
model score -0.3657
model score -0.2778
model score -0.2753
model score -0.2960
model score -0.4206
model score -0.4310
model score -0.4113
model score -0.3885
model score -0.3977
model score -0.4181
model score -0.4401
model score -0.4401
model score -0.4401
model score -0.4401
model score -0.4401
model score -0.4236
model score -0.4529
model score -0.4432
model score -0.4491
model score -0.4660
model score -0.4235
model score -0.4172
model score -0.4101
model score -0.4165
model score -0.3909
model score -0.4104
model score -0.3849
model score -0.3428
model score -0.3724
model score -0.4360
model score -0.4236
model score -0.4018
model score -0.3873
model score -0.4112
model score -0.4157
model score -0.4120
model score -0.3743
model score -0.4373
model score -0.4665
model score -0.4558
model score -0.3953
model score 0.8969
model score -0.3628
model score -0.3339
model score -0.3992
model score 1.2743
model score 1.2736
model score 1.2744
model score 1.2731
model score 1.2741
model score 1.2745
model score 1.2743
model score 1.2744
model score 1.2749
model score 1.2744
model score -0.4734
model score -0.4688
model score -0.3152
model score -0.5013
model score -0.4586
model score -0.4522
model score -0.4256
model score -0.4362
model score -0.4604
model score -0.4291
model score -0.4446
model score -0.4196
model score -0.4362
model score -0.4577
model score -0.4230
model score -0.4515
model score -0.4239
model score -0.4338
model score -0.4169
model score -0.4545
model score 1.2741
model score 1.2744
model score 1.2744
model score 1.2734
model score 1.2744
model score -0.3744
model score 1.2741
model score 1.2744
model score 1.2744
model score 1.2734
model score 1.2744
model score -0.4655
model score -0.4567
model score -0.4437
model score -0.4167
model score -0.4542
model score -0.4081
model score -0.4406
model score 1.2752
model score 1.2741
model score 1.2737
model score 1.2738
model score 1.2730
model score 1.2714
model score 1.2715
model score 1.2716
model score 1.2713
model score 1.2712
model score -0.0085
model score 0.0339
model score 0.1073
model score 0.0217
model score 0.0606
model score 2.1634
model score 0.0845
model score -0.0766
model score -0.0741
model score -0.0626
model score -0.0933
model score -0.2484
model score -0.2476
model score -0.2628
model score -0.3937
model score -0.2975
model score -0.4479
model score -0.4245
model score -0.4166
model score -0.4281
model score -0.4280
model score -0.2505
model score -0.4028
weight: 0.9714 eval: -0.4171 min: -0.5112 max: 2.4506
weight: 0.9837 eval: -0.4574 min: -0.5112 max: 2.4506
weight: 0.9837 eval: -0.4574 min: -0.5112 max: 2.4506
weight: 0.9842 eval: -0.4593 min: -0.5112 max: 2.4506
weight: 0.9793 eval: -0.4431 min: -0.5112 max: 2.4506
weight: 0.9821 eval: -0.4524 min: -0.5112 max: 2.4506
weight: 0.9807 eval: -0.4478 min: -0.5112 max: 2.4506
weight: 0.9678 eval: -0.4051 min: -0.5112 max: 2.4506
weight: 0.9629 eval: -0.3890 min: -0.5112 max: 2.4506
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weight: 0.9621 eval: -0.3864 min: -0.5112 max: 2.4506
weight: 0.9827 eval: -0.4541 min: -0.5112 max: 2.4506
weight: 0.9740 eval: -0.4255 min: -0.5112 max: 2.4506
weight: 0.9553 eval: -0.3640 min: -0.5112 max: 2.4506
weight: 0.9949 eval: -0.4946 min: -0.5112 max: 2.4506
weight: 0.5341 eval: 1.0221 min: -0.5112 max: 2.4506
weight: 0.3757 eval: 1.5434 min: -0.5112 max: 2.4506
weight: 0.3496 eval: 1.6291 min: -0.5112 max: 2.4506
weight: 0.2337 eval: 2.0106 min: -0.5112 max: 2.4506
weight: 0.3607 eval: 1.5928 min: -0.5112 max: 2.4506
weight: 0.3150 eval: 1.7430 min: -0.5112 max: 2.4506
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weight: 0.9310 eval: -0.2841 min: -0.5112 max: 2.4506
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weight: 0.1000 eval: 2.4506 min: -0.5112 max: 2.4506
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weight: 0.4574 eval: 1.2744 min: -0.5112 max: 2.4506
weight: 0.4566 eval: 1.2771 min: -0.5112 max: 2.4506
weight: 0.4566 eval: 1.2771 min: -0.5112 max: 2.4506
weight: 0.9801 eval: -0.4456 min: -0.5112 max: 2.4506
weight: 0.9614 eval: -0.3841 min: -0.5112 max: 2.4506
weight: 0.9767 eval: -0.4345 min: -0.5112 max: 2.4506
weight: 0.9813 eval: -0.4496 min: -0.5112 max: 2.4506
weight: 0.9670 eval: -0.4025 min: -0.5112 max: 2.4506
weight: 0.9689 eval: -0.4089 min: -0.5112 max: 2.4506
weight: 0.9719 eval: -0.4187 min: -0.5112 max: 2.4506
weight: 0.9728 eval: -0.4217 min: -0.5112 max: 2.4506
weight: 0.9717 eval: -0.4180 min: -0.5112 max: 2.4506
weight: 0.9706 eval: -0.4145 min: -0.5112 max: 2.4506
weight: 0.9715 eval: -0.4174 min: -0.5112 max: 2.4506
weight: 0.9546 eval: -0.3618 min: -0.5112 max: 2.4506
weight: 0.9546 eval: -0.3618 min: -0.5112 max: 2.4506
weight: 0.9598 eval: -0.3790 min: -0.5112 max: 2.4506
weight: 0.9497 eval: -0.3457 min: -0.5112 max: 2.4506
weight: 0.9495 eval: -0.3451 min: -0.5112 max: 2.4506
weight: 0.9475 eval: -0.3383 min: -0.5112 max: 2.4506
weight: 0.9542 eval: -0.3605 min: -0.5112 max: 2.4506
weight: 0.9704 eval: -0.4136 min: -0.5112 max: 2.4506
weight: 0.9744 eval: -0.4270 min: -0.5112 max: 2.4506
weight: 0.9879 eval: -0.4714 min: -0.5112 max: 2.4506
weight: 0.9804 eval: -0.4465 min: -0.5112 max: 2.4506
weight: 0.9690 eval: -0.4093 min: -0.5112 max: 2.4506
weight: 0.9601 eval: -0.3799 min: -0.5112 max: 2.4506
weight: 0.9688 eval: -0.4086 min: -0.5112 max: 2.4506
weight: 0.9768 eval: -0.4349 min: -0.5112 max: 2.4506
weight: 0.9661 eval: -0.3998 min: -0.5112 max: 2.4506
weight: 0.9719 eval: -0.4187 min: -0.5112 max: 2.4506
weight: 0.9496 eval: -0.3453 min: -0.5112 max: 2.4506
weight: 0.9381 eval: -0.3076 min: -0.5112 max: 2.4506
weight: 0.9411 eval: -0.3173 min: -0.5112 max: 2.4506
weight: 0.9393 eval: -0.3116 min: -0.5112 max: 2.4506
weight: 0.9354 eval: -0.2985 min: -0.5112 max: 2.4506
weight: 0.9725 eval: -0.4208 min: -0.5112 max: 2.4506
weight: 0.9463 eval: -0.3346 min: -0.5112 max: 2.4506
weight: 0.9428 eval: -0.3230 min: -0.5112 max: 2.4506
weight: 0.9429 eval: -0.3234 min: -0.5112 max: 2.4506
weight: 0.9453 eval: -0.3311 min: -0.5112 max: 2.4506
weight: 0.9439 eval: -0.3265 min: -0.5112 max: 2.4506
weight: 0.9576 eval: -0.3715 min: -0.5112 max: 2.4506
weight: 0.9558 eval: -0.3657 min: -0.5112 max: 2.4506
weight: 0.9291 eval: -0.2778 min: -0.5112 max: 2.4506
weight: 0.9283 eval: -0.2753 min: -0.5112 max: 2.4506
weight: 0.9346 eval: -0.2960 min: -0.5112 max: 2.4506
weight: 0.9725 eval: -0.4206 min: -0.5112 max: 2.4506
weight: 0.9756 eval: -0.4310 min: -0.5112 max: 2.4506
weight: 0.9696 eval: -0.4113 min: -0.5112 max: 2.4506
weight: 0.9627 eval: -0.3885 min: -0.5112 max: 2.4506
weight: 0.9655 eval: -0.3977 min: -0.5112 max: 2.4506
weight: 0.9717 eval: -0.4181 min: -0.5112 max: 2.4506
weight: 0.9784 eval: -0.4401 min: -0.5112 max: 2.4506
weight: 0.9784 eval: -0.4401 min: -0.5112 max: 2.4506
weight: 0.9784 eval: -0.4401 min: -0.5112 max: 2.4506
weight: 0.9784 eval: -0.4401 min: -0.5112 max: 2.4506
weight: 0.9784 eval: -0.4401 min: -0.5112 max: 2.4506
weight: 0.9734 eval: -0.4236 min: -0.5112 max: 2.4506
weight: 0.9823 eval: -0.4529 min: -0.5112 max: 2.4506
weight: 0.9793 eval: -0.4432 min: -0.5112 max: 2.4506
weight: 0.9811 eval: -0.4491 min: -0.5112 max: 2.4506
weight: 0.9863 eval: -0.4660 min: -0.5112 max: 2.4506
weight: 0.9734 eval: -0.4235 min: -0.5112 max: 2.4506
weight: 0.9714 eval: -0.4172 min: -0.5112 max: 2.4506
weight: 0.9693 eval: -0.4101 min: -0.5112 max: 2.4506
weight: 0.9712 eval: -0.4165 min: -0.5112 max: 2.4506
weight: 0.9635 eval: -0.3909 min: -0.5112 max: 2.4506
weight: 0.9694 eval: -0.4104 min: -0.5112 max: 2.4506
weight: 0.9616 eval: -0.3849 min: -0.5112 max: 2.4506
weight: 0.9488 eval: -0.3428 min: -0.5112 max: 2.4506
weight: 0.9578 eval: -0.3724 min: -0.5112 max: 2.4506
weight: 0.9772 eval: -0.4360 min: -0.5112 max: 2.4506
weight: 0.9734 eval: -0.4236 min: -0.5112 max: 2.4506
weight: 0.9668 eval: -0.4018 min: -0.5112 max: 2.4506
weight: 0.9624 eval: -0.3873 min: -0.5112 max: 2.4506
weight: 0.9696 eval: -0.4112 min: -0.5112 max: 2.4506
weight: 0.9710 eval: -0.4157 min: -0.5112 max: 2.4506
weight: 0.9699 eval: -0.4120 min: -0.5112 max: 2.4506
weight: 0.9584 eval: -0.3743 min: -0.5112 max: 2.4506
weight: 0.9775 eval: -0.4373 min: -0.5112 max: 2.4506
weight: 0.9864 eval: -0.4665 min: -0.5112 max: 2.4506
weight: 0.9832 eval: -0.4558 min: -0.5112 max: 2.4506
weight: 0.9648 eval: -0.3953 min: -0.5112 max: 2.4506
weight: 0.5721 eval: 0.8969 min: -0.5112 max: 2.4506
weight: 0.9549 eval: -0.3628 min: -0.5112 max: 2.4506
weight: 0.9461 eval: -0.3339 min: -0.5112 max: 2.4506
weight: 0.9660 eval: -0.3992 min: -0.5112 max: 2.4506
weight: 0.4575 eval: 1.2743 min: -0.5112 max: 2.4506
weight: 0.4577 eval: 1.2736 min: -0.5112 max: 2.4506
weight: 0.4574 eval: 1.2744 min: -0.5112 max: 2.4506
weight: 0.4578 eval: 1.2731 min: -0.5112 max: 2.4506
weight: 0.4575 eval: 1.2741 min: -0.5112 max: 2.4506
weight: 0.4574 eval: 1.2745 min: -0.5112 max: 2.4506
weight: 0.4575 eval: 1.2743 min: -0.5112 max: 2.4506
weight: 0.4574 eval: 1.2744 min: -0.5112 max: 2.4506
weight: 0.4573 eval: 1.2749 min: -0.5112 max: 2.4506
weight: 0.4574 eval: 1.2744 min: -0.5112 max: 2.4506
weight: 0.9885 eval: -0.4734 min: -0.5112 max: 2.4506
weight: 0.9871 eval: -0.4688 min: -0.5112 max: 2.4506
weight: 0.9405 eval: -0.3152 min: -0.5112 max: 2.4506
weight: 0.9970 eval: -0.5013 min: -0.5112 max: 2.4506
weight: 0.9840 eval: -0.4586 min: -0.5112 max: 2.4506
weight: 0.9821 eval: -0.4522 min: -0.5112 max: 2.4506
weight: 0.9740 eval: -0.4256 min: -0.5112 max: 2.4506
weight: 0.9772 eval: -0.4362 min: -0.5112 max: 2.4506
weight: 0.9846 eval: -0.4604 min: -0.5112 max: 2.4506
weight: 0.9751 eval: -0.4291 min: -0.5112 max: 2.4506
weight: 0.9798 eval: -0.4446 min: -0.5112 max: 2.4506
weight: 0.9722 eval: -0.4196 min: -0.5112 max: 2.4506
weight: 0.9772 eval: -0.4362 min: -0.5112 max: 2.4506
weight: 0.9837 eval: -0.4577 min: -0.5112 max: 2.4506
weight: 0.9732 eval: -0.4230 min: -0.5112 max: 2.4506
weight: 0.9819 eval: -0.4515 min: -0.5112 max: 2.4506
weight: 0.9735 eval: -0.4239 min: -0.5112 max: 2.4506
weight: 0.9765 eval: -0.4338 min: -0.5112 max: 2.4506
weight: 0.9714 eval: -0.4169 min: -0.5112 max: 2.4506
weight: 0.9828 eval: -0.4545 min: -0.5112 max: 2.4506
weight: 0.4575 eval: 1.2741 min: -0.5112 max: 2.4506
weight: 0.4574 eval: 1.2744 min: -0.5112 max: 2.4506
weight: 0.4574 eval: 1.2744 min: -0.5112 max: 2.4506
weight: 0.4577 eval: 1.2734 min: -0.5112 max: 2.4506
weight: 0.4574 eval: 1.2744 min: -0.5112 max: 2.4506
weight: 0.9584 eval: -0.3744 min: -0.5112 max: 2.4506
weight: 0.4575 eval: 1.2741 min: -0.5112 max: 2.4506
weight: 0.4574 eval: 1.2744 min: -0.5112 max: 2.4506
weight: 0.4574 eval: 1.2744 min: -0.5112 max: 2.4506
weight: 0.4577 eval: 1.2734 min: -0.5112 max: 2.4506
weight: 0.4574 eval: 1.2744 min: -0.5112 max: 2.4506
weight: 0.9861 eval: -0.4655 min: -0.5112 max: 2.4506
weight: 0.9835 eval: -0.4567 min: -0.5112 max: 2.4506
weight: 0.9795 eval: -0.4437 min: -0.5112 max: 2.4506
weight: 0.9713 eval: -0.4167 min: -0.5112 max: 2.4506
weight: 0.9827 eval: -0.4542 min: -0.5112 max: 2.4506
weight: 0.9687 eval: -0.4081 min: -0.5112 max: 2.4506
weight: 0.9786 eval: -0.4406 min: -0.5112 max: 2.4506
weight: 0.4572 eval: 1.2752 min: -0.5112 max: 2.4506
weight: 0.4575 eval: 1.2741 min: -0.5112 max: 2.4506
weight: 0.4576 eval: 1.2737 min: -0.5112 max: 2.4506
weight: 0.4576 eval: 1.2738 min: -0.5112 max: 2.4506
weight: 0.4578 eval: 1.2730 min: -0.5112 max: 2.4506
weight: 0.4583 eval: 1.2714 min: -0.5112 max: 2.4506
weight: 0.4583 eval: 1.2715 min: -0.5112 max: 2.4506
weight: 0.4583 eval: 1.2716 min: -0.5112 max: 2.4506
weight: 0.4584 eval: 1.2713 min: -0.5112 max: 2.4506
weight: 0.4584 eval: 1.2712 min: -0.5112 max: 2.4506
weight: 0.8472 eval: -0.0085 min: -0.5112 max: 2.4506
weight: 0.8344 eval: 0.0339 min: -0.5112 max: 2.4506
weight: 0.8121 eval: 0.1073 min: -0.5112 max: 2.4506
weight: 0.8381 eval: 0.0217 min: -0.5112 max: 2.4506
weight: 0.8263 eval: 0.0606 min: -0.5112 max: 2.4506
weight: 0.1873 eval: 2.1634 min: -0.5112 max: 2.4506
weight: 0.8190 eval: 0.0845 min: -0.5112 max: 2.4506
weight: 0.8679 eval: -0.0766 min: -0.5112 max: 2.4506
weight: 0.8672 eval: -0.0741 min: -0.5112 max: 2.4506
weight: 0.8637 eval: -0.0626 min: -0.5112 max: 2.4506
weight: 0.8730 eval: -0.0933 min: -0.5112 max: 2.4506
weight: 0.9201 eval: -0.2484 min: -0.5112 max: 2.4506
weight: 0.9199 eval: -0.2476 min: -0.5112 max: 2.4506
weight: 0.9245 eval: -0.2628 min: -0.5112 max: 2.4506
weight: 0.9643 eval: -0.3937 min: -0.5112 max: 2.4506
weight: 0.9351 eval: -0.2975 min: -0.5112 max: 2.4506
weight: 0.9808 eval: -0.4479 min: -0.5112 max: 2.4506
weight: 0.9737 eval: -0.4245 min: -0.5112 max: 2.4506
weight: 0.9713 eval: -0.4166 min: -0.5112 max: 2.4506
weight: 0.9748 eval: -0.4281 min: -0.5112 max: 2.4506
weight: 0.9747 eval: -0.4280 min: -0.5112 max: 2.4506
weight: 0.9208 eval: -0.2505 min: -0.5112 max: 2.4506
weight: 0.9671 eval: -0.4028 min: -0.5112 max: 2.4506
Adding 9897 constraints to all2.constraints
Done adding distance constraints
# command:Reading probabilities from probabilities.dat
Reading constraints from ConstraintSet all2.constraints
maxweight: 1.0000
Optimizing...
 Probability sum: -542.5987, CN propb: -542.5987 weights: 0.4219 constraints: 1165
# command:Found ConstraintSet
# PrintContacts align.constraints_meta02
Number of constraints in align2.constraints 1165
# command:Found ConstraintSet
# PrintContacts align_bonus.constraints_meta02
Number of constraints in align2.constraints.bonus 1165
# command:Found ConstraintSet
# PrintContacts rejected.constraints_meta02
Number of constraints in rejected2.constraints 8732
# command:Found ConstraintSet
# PrintContacts rejected_bonus.constraints_meta02
Number of constraints in rejected2.constraints.bonus 8732
# command:Found ConstraintSet
# PrintContacts non_contacts.constraints_meta02
Number of constraints in noncontact2.constraints 0
# command:Found ConstraintSet
# PrintContacts non_contacts_bonus.constraints_meta02
Number of constraints in noncontact2.constraints.bonus 0
# command:Found ConstraintSet
# PrintContacts all.constraints_meta02
Number of constraints in all2.constraints 9897
# command: