# INITIALIZE InFilePrefix /projects/compbio/experiments/undertaker/atoms-inputs/ ReadTrainingAtoms dunbrack-2191.atoms ReadRotamerLibrary dunbrack-2191.rot InFilePrefix /projects/compbio/experiments/undertaker/spots/ ReadAtomType exp-pdb.types ReadClashTable exp-pdb-2191-2symm.clash SetClashDefinition exp-pdb-2191-2symm InFilePrefix /projects/compbio/experiments/protein-predict/casp7/T0ID/ ReadTargetSeq T0ID.a2m 1 # READ CONSTRAINTS InFilePrefix /projects/compbio/experiments/protein-predict/casp7/T0ID/ # current best set of constraints Include USECONSTRAINTS # READ SERVERS (local) InFilePrefix Include servers-clean.under # EXTRACT NEW CONSTRAINTS ExtractConstraints ALPHA quit