cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0283 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0288 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0289 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0290 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0291 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0292 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0293 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0295 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0296 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0297 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0298 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0299 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0300 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0301 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0302 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0303 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0304 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0305 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0306 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0307 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0308 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0309 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0311 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0312 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0313 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0314 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0315 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0316 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0317 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0318 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0319 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0321 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0322 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0323 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0324 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0325 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0326 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0327 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0328 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0329 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0330 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0331 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0332 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0335 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0338 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0339 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0340 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0341 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0342 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0345 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0346 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0347 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0348 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0349 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0350 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0351 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0353 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0354 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0356 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0357 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0358 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0359 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0360 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0361 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0362 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0363 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0364 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0365 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0367 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0368 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0369 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0370 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0371 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0372 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0373 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0374 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0375 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0376 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0378 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0379 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0380 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0381 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0382 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0383 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0384 rm fraction-local100.under cat alignment_constraints.under|sort -g -k 7 -r|gawk -f ../scripts/bestfraction.awk -v F=-local100 > fraction-local100.under cat fraction-local100.under > constraint-fraction-local100.costfcn echo "SetCost constraints 1" >> constraint-fraction-local100.costfcn cp constraint-fraction-local100.costfcn /projects/compbio/experiments/protein-predict/casp7/T0385 rm fraction-local100.under