# INITIALIZE InFilePrefix /projects/compbio/experiments/undertaker/atoms-inputs/ ReadTrainingAtoms dunbrack-2191.atoms ReadRotamerLibrary dunbrack-2191.rot InFilePrefix /projects/compbio/experiments/undertaker/spots/ ReadAtomType exp-pdb.types ReadClashTable exp-pdb-2191-2symm.clash SetClashDefinition exp-pdb-2191-2symm InFilePrefix /projects/compbio/experiments/protein-predict/casp7/T0383/ ReadTargetSeq T0383.a2m 1 # READ CONSTRAINTS InFilePrefix /projects/compbio/experiments/protein-predict/casp7/T0383/ # current best set of constraints Include constraint-optimized_bonus-0.4.costfcn # READ SERVERS (local) InFilePrefix Include servers-clean.under # EXTRACT NEW CONSTRAINTS ExtractConstraints 30 quit