# command:# Prefix for input files set to /projects/compbio/experiments/undertaker/atoms-inputs/ # command:# reading dunbrack-2191.atoms # #computed average backbone with maximum peptide_sq_deviance = 0.002 # computed average trans backbone unit from 53157 examples # computed average trans backbone unit before proline from 2010 examples # computed average cis backbone unit from 97 examples # trans (non-proline) backbone unit: # CA= -2.2087 1.0126 -0.0030 # O= -0.1499 2.2440 0.0016 # C= -0.6889 1.1368 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4581 -0.0000 0.0000 # cis backbone unit: # CA= -0.1436 2.4534 -0.0002 # O= -2.0284 0.9742 0.0015 # C= -0.8018 1.0771 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4668 0.0000 0.0000 # trans backbone unit before proline: # CA= -2.2100 1.0631 -0.0014 # O= -0.1236 2.2458 0.0075 # C= -0.6872 1.1517 -0.0000 # N+1= 0.0000 0.0000 0.0000 # CA+1= 1.4660 0.0000 0.0000 # After reading dunbrack-2191.atoms have 2191 chains in training database # Count of chains,residues,atoms: 2191,500310,3902258 # 493341 residues have no bad marker # 3226 residues lack atoms needed to compute omega # 1453 residues have cis peptide # number of each bad type: # NON_STANDARD_RESIDUE 4 # HAS_OXT 1167 # TOO_MANY_ATOMS 1 # TOO_FEW_ATOMS 3052 # HAS_UNKNOWN_ATOMS 9 # HAS_DUPLICATE_ATOMS 0 # CHAIN_BREAK_BEFORE 979 # NON_PLANAR_PEPTIDE 888 # BAD_PEPTIDE 2680 # Note: may sum to more than number of residues, # because one residue may have multiple problems # command:# Reading rotamer library from dunbrack-2191.rot # command:# Prefix for input files set to /projects/compbio/experiments/undertaker/spots/ # command:# ReadAtomType exp-pdb.types Read AtomType exp-pdb with 49 types. # command:# ReadClashTable exp-pdb-2191-2symm.clash # Read ClashTable exp-pdb-2191-2symm checking bonds symmetric at MaxSep 2 # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0359/ # command:# Making conformation for sequence T0359 numbered 1 through 97 Created new target T0359 from T0359.a2m # command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/casp7/T0359/ # command:# reading script from file T0359.t04.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0359-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2fe5A expands to /projects/compbio/data/pdb/2fe5.pdb.gz 2fe5A:Skipped atom 9, because occupancy 0.3 <= existing 0.700 in 2fe5A Skipped atom 13, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 15, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 17, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 19, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 42, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 44, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 47, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 51, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 53, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 55, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 57, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 59, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 294, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 296, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 298, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 300, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 302, because occupancy 0.400 <= existing 0.600 in 2fe5A Skipped atom 317, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 320, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 431, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 433, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 435, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 437, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 439, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 441, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 443, because occupancy 0.300 <= existing 0.700 in 2fe5A Skipped atom 593, because occupancy 0.250 <= existing 0.750 in 2fe5A Skipped atom 597, because occupancy 0.250 <= existing 0.750 in 2fe5A Skipped atom 599, because occupancy 0.250 <= existing 0.750 in 2fe5A Skipped atom 618, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 620, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 622, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 624, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 626, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 628, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 630, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 632, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 634, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 636, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 638, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 640, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 642, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 644, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 646, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 648, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 650, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 652, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 654, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 656, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 658, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 660, because occupancy 0.500 <= existing 0.500 in 2fe5A Skipped atom 662, because occupancy 0.500 <= existing 0.500 in 2fe5A # T0359 read from 2fe5A/T0359-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0359-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2fe5A to template set # found chain 2fe5A in template set Warning: unaligning (T0359)E94 because last residue in template chain is (2fe5A)S314 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIGNQHI # choosing archetypes in rotamer library T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=2 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1583571042.pdb -s /var/tmp/to_scwrl_1583571042.seq -o /var/tmp/from_scwrl_1583571042.pdb > /var/tmp/scwrl_1583571042.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1583571042.pdb Number of alignments=1 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/T0359-2fneA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2fneA expands to /projects/compbio/data/pdb/2fne.pdb.gz 2fneA:Skipped atom 15, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 19, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 21, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 23, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 25, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 27, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 658, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 662, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 664, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 666, because occupancy 0.500 <= existing 0.500 in 2fneA Skipped atom 668, because occupancy 0.500 <= existing 0.500 in 2fneA # T0359 read from 2fneA/T0359-2fneA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fneA read from 2fneA/T0359-2fneA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2fneA to template set # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2fneA 1980 :PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 2 number of extra gaps= 0 total=4 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_559301039.pdb -s /var/tmp/to_scwrl_559301039.seq -o /var/tmp/from_scwrl_559301039.pdb > /var/tmp/scwrl_559301039.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_559301039.pdb Number of alignments=2 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0359-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 1g9oA/T0359-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0359-1g9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1g9oA)R9 T0359 3 :SETFDVELTKNVQGLGITIAGY 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGE T0359 30 :LEPSGIFVKSITKSSAVEHDG 1g9oA 32 :KGKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET T0359 95 :TSV 1g9oA 97 :EQL Number of specific fragments extracted= 4 number of extra gaps= 0 total=8 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1395132001.pdb -s /var/tmp/to_scwrl_1395132001.seq -o /var/tmp/from_scwrl_1395132001.pdb > /var/tmp/scwrl_1395132001.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1395132001.pdb Number of alignments=3 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0359-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 1tp5A expands to /projects/compbio/data/pdb/1tp5.pdb.gz 1tp5A:# T0359 read from 1tp5A/T0359-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0359-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1tp5A to template set # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGY 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 331 :EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRR 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=11 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1186090427.pdb -s /var/tmp/to_scwrl_1186090427.seq -o /var/tmp/from_scwrl_1186090427.pdb > /var/tmp/scwrl_1186090427.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1186090427.pdb Number of alignments=4 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0359-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2fcfA expands to /projects/compbio/data/pdb/2fcf.pdb.gz 2fcfA:Skipped atom 598, because occupancy 0.500 <= existing 0.500 in 2fcfA Skipped atom 602, because occupancy 0.500 <= existing 0.500 in 2fcfA Skipped atom 604, because occupancy 0.500 <= existing 0.500 in 2fcfA Skipped atom 606, because occupancy 0.500 <= existing 0.500 in 2fcfA # T0359 read from 2fcfA/T0359-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0359-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2fcfA to template set # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 1 :SMSETFDVELTKN 2fcfA 1145 :QSMQPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=14 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1974806402.pdb -s /var/tmp/to_scwrl_1974806402.seq -o /var/tmp/from_scwrl_1974806402.pdb > /var/tmp/scwrl_1974806402.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1974806402.pdb Number of alignments=5 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavA/T0359-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 1qavA expands to /projects/compbio/data/pdb/1qav.pdb.gz 1qavA:# T0359 read from 1qavA/T0359-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1qavA read from 1qavA/T0359-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1qavA to template set # found chain 1qavA in template set T0359 2 :MSETFDVELTKNVQ 1qavA 76 :SLQRRRVTVRKADA T0359 16 :GLGITIAGY 1qavA 91 :GLGISIKGG T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1qavA 100 :RENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 3 number of extra gaps= 0 total=17 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1473144499.pdb -s /var/tmp/to_scwrl_1473144499.seq -o /var/tmp/from_scwrl_1473144499.pdb > /var/tmp/scwrl_1473144499.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1473144499.pdb Number of alignments=6 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2h2bA/T0359-2h2bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2h2bA expands to /projects/compbio/data/pdb/2h2b.pdb.gz 2h2bA:# T0359 read from 2h2bA/T0359-2h2bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2h2bA read from 2h2bA/T0359-2h2bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2h2bA to template set # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIG 2h2bA 33 :GFGIAISGGRD T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h2bA 46 :HFQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG T0359 96 :SV 2h2bA 116 :RT Number of specific fragments extracted= 5 number of extra gaps= 0 total=22 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1739000680.pdb -s /var/tmp/to_scwrl_1739000680.seq -o /var/tmp/from_scwrl_1739000680.pdb > /var/tmp/scwrl_1739000680.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1739000680.pdb Number of alignments=7 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2h3lA/T0359-2h3lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2h3lA expands to /projects/compbio/data/pdb/2h3l.pdb.gz 2h3lA:# T0359 read from 2h3lA/T0359-2h3lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2h3lA read from 2h3lA/T0359-2h3lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2h3lA to template set # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 T0359 5 :TFDVELTKNV 2h3lA 1321 :EIRVRVEKDP T0359 16 :GLGITIAGYIG 2h3lA 1331 :ELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVEH 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPASK T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1368 :LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 1 total=26 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1498617646.pdb -s /var/tmp/to_scwrl_1498617646.seq -o /var/tmp/from_scwrl_1498617646.pdb > /var/tmp/scwrl_1498617646.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1498617646.pdb Number of alignments=8 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0359-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2f0aA expands to /projects/compbio/data/pdb/2f0a.pdb.gz 2f0aA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0359 read from 2f0aA/T0359-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0359-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2f0aA to template set # found chain 2f0aA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVELT 2f0aA 252 :IITVTLN T0359 16 :GLGITIAGYIG 2f0aA 264 :FLGISIVGQSN T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=30 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_669908538.pdb -s /var/tmp/to_scwrl_669908538.seq -o /var/tmp/from_scwrl_669908538.pdb > /var/tmp/scwrl_669908538.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_669908538.pdb Number of alignments=9 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/T0359-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 2f5yA expands to /projects/compbio/data/pdb/2f5y.pdb.gz 2f5yA:Skipped atom 397, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 401, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 403, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 405, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 407, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 409, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 411, because occupancy 0.500 <= existing 0.500 in 2f5yA Skipped atom 413, because occupancy 0.500 <= existing 0.500 in 2f5yA # T0359 read from 2f5yA/T0359-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f5yA read from 2f5yA/T0359-2f5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 2f5yA to template set # found chain 2f5yA in template set Warning: unaligning (T0359)S3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=34 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1387036158.pdb -s /var/tmp/to_scwrl_1387036158.seq -o /var/tmp/from_scwrl_1387036158.pdb > /var/tmp/scwrl_1387036158.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1387036158.pdb Number of alignments=10 # command:# reading script from file T0359.t06.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/T0359-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2fneA/T0359-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fneA read from 2fneA/T0359-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGSPH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2fneA 1982 :GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETS Number of specific fragments extracted= 2 number of extra gaps= 0 total=36 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_12895151.pdb -s /var/tmp/to_scwrl_12895151.seq -o /var/tmp/from_scwrl_12895151.pdb > /var/tmp/scwrl_12895151.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_12895151.pdb Number of alignments=11 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0359-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2fe5A/T0359-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0359-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fe5A in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fe5A)S221 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=38 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1144522534.pdb -s /var/tmp/to_scwrl_1144522534.seq -o /var/tmp/from_scwrl_1144522534.pdb > /var/tmp/scwrl_1144522534.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1144522534.pdb Number of alignments=12 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0359-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 1tp5A/T0359-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0359-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRR 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=41 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1812282133.pdb -s /var/tmp/to_scwrl_1812282133.seq -o /var/tmp/from_scwrl_1812282133.pdb > /var/tmp/scwrl_1812282133.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1812282133.pdb Number of alignments=13 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0359-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 1g9oA/T0359-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0359-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=44 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1328104338.pdb -s /var/tmp/to_scwrl_1328104338.seq -o /var/tmp/from_scwrl_1328104338.pdb > /var/tmp/scwrl_1328104338.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1328104338.pdb Number of alignments=14 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0359-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2fcfA/T0359-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0359-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 1 :SMSETFDVELTKN 2fcfA 1145 :QSMQPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=47 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1380171691.pdb -s /var/tmp/to_scwrl_1380171691.seq -o /var/tmp/from_scwrl_1380171691.pdb > /var/tmp/scwrl_1380171691.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1380171691.pdb Number of alignments=15 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavA/T0359-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 1qavA/T0359-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1qavA read from 1qavA/T0359-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1qavA in template set T0359 1 :SMSETFDVELTKNVQG 1qavA 75 :GSLQRRRVTVRKADAG T0359 17 :LGITIAGYIG 1qavA 92 :LGISIKGGRE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1qavA 102 :NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 3 number of extra gaps= 0 total=50 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1113502214.pdb -s /var/tmp/to_scwrl_1113502214.seq -o /var/tmp/from_scwrl_1113502214.pdb > /var/tmp/scwrl_1113502214.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1113502214.pdb Number of alignments=16 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2h2bA/T0359-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2h2bA/T0359-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2h2bA read from 2h2bA/T0359-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIGD 2h2bA 33 :GFGIAISGGRDN T0359 28 :KKLEPSGIFVKSITKSSAVE 2h2bA 47 :FQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGG Number of specific fragments extracted= 4 number of extra gaps= 0 total=54 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_860516127.pdb -s /var/tmp/to_scwrl_860516127.seq -o /var/tmp/from_scwrl_860516127.pdb > /var/tmp/scwrl_860516127.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_860516127.pdb Number of alignments=17 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2h3lA/T0359-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2h3lA/T0359-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2h3lA read from 2h3lA/T0359-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 T0359 4 :ETFDVELTKNV 2h3lA 1320 :QEIRVRVEKDP T0359 16 :GLGITIAGYIGDKKL 2h3lA 1331 :ELGFSISGGVGGRGN T0359 31 :EPSGIFVKSITKSSAVE 2h3lA 1350 :DDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1367 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 1 total=58 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_777720504.pdb -s /var/tmp/to_scwrl_777720504.seq -o /var/tmp/from_scwrl_777720504.pdb > /var/tmp/scwrl_777720504.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_777720504.pdb Number of alignments=18 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0359-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2f0aA/T0359-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0359-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVELT 2f0aA 252 :IITVTLN T0359 16 :GLGITIAGYIGDK 2f0aA 264 :FLGISIVGQSNER T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=62 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1543755628.pdb -s /var/tmp/to_scwrl_1543755628.seq -o /var/tmp/from_scwrl_1543755628.pdb > /var/tmp/scwrl_1543755628.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1543755628.pdb Number of alignments=19 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/T0359-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2f5yA/T0359-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f5yA read from 2f5yA/T0359-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f5yA in template set Warning: unaligning (T0359)S3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIA 2f5yA 16 :YRQITIPRGKDGFGFTIC T0359 31 :EPSGIFVKSITKSSAVEHDG 2f5yA 34 :CDSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=66 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1722060048.pdb -s /var/tmp/to_scwrl_1722060048.seq -o /var/tmp/from_scwrl_1722060048.pdb > /var/tmp/scwrl_1722060048.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1722060048.pdb Number of alignments=20 # command:# reading script from file T0359.t2k.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0359-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2fe5A/T0359-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0359-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fe5A in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 247 :QHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=68 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1455590963.pdb -s /var/tmp/to_scwrl_1455590963.seq -o /var/tmp/from_scwrl_1455590963.pdb > /var/tmp/scwrl_1455590963.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1455590963.pdb Number of alignments=21 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0359-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 1g9oA/T0359-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0359-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGK T0359 33 :SGIFVKSITKSSAVEHDG 1g9oA 35 :LGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=71 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_328298285.pdb -s /var/tmp/to_scwrl_328298285.seq -o /var/tmp/from_scwrl_328298285.pdb > /var/tmp/scwrl_328298285.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_328298285.pdb Number of alignments=22 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/T0359-2fneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2fneA/T0359-2fneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fneA read from 2fneA/T0359-2fneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2fneA 1980 :PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETS Number of specific fragments extracted= 2 number of extra gaps= 0 total=73 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_70636429.pdb -s /var/tmp/to_scwrl_70636429.seq -o /var/tmp/from_scwrl_70636429.pdb > /var/tmp/scwrl_70636429.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_70636429.pdb Number of alignments=23 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0359-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 1tp5A/T0359-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0359-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRR 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=76 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_136495343.pdb -s /var/tmp/to_scwrl_136495343.seq -o /var/tmp/from_scwrl_136495343.pdb > /var/tmp/scwrl_136495343.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_136495343.pdb Number of alignments=24 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0359-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2fcfA/T0359-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0359-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fcfA in template set Warning: unaligning (T0359)N13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 2 :MSETFDVELT 2fcfA 1146 :SMQPRRVELW T0359 12 :K 2fcfA 1157 :E T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 4 number of extra gaps= 1 total=80 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1472576334.pdb -s /var/tmp/to_scwrl_1472576334.seq -o /var/tmp/from_scwrl_1472576334.pdb > /var/tmp/scwrl_1472576334.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1472576334.pdb Number of alignments=25 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2h3lA/T0359-2h3lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2h3lA/T0359-2h3lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2h3lA read from 2h3lA/T0359-2h3lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2h3lA in template set T0359 2 :MSETFDVELTKNVQ 2h3lA 1318 :AKQEIRVRVEKDPE T0359 17 :LGITIAGYIG 2h3lA 1332 :LGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2h3lA 1366 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVRE Number of specific fragments extracted= 4 number of extra gaps= 0 total=84 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_402903177.pdb -s /var/tmp/to_scwrl_402903177.seq -o /var/tmp/from_scwrl_402903177.pdb > /var/tmp/scwrl_402903177.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_402903177.pdb Number of alignments=26 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2h2bA/T0359-2h2bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2h2bA/T0359-2h2bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2h2bA read from 2h2bA/T0359-2h2bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTK 2h2bA 18 :IWEQHTVTLHR T0359 13 :NVQGLGITIAGYIG 2h2bA 30 :PGFGFGIAISGGRD T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h2bA 46 :HFQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGGW Number of specific fragments extracted= 4 number of extra gaps= 0 total=88 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1329202899.pdb -s /var/tmp/to_scwrl_1329202899.seq -o /var/tmp/from_scwrl_1329202899.pdb > /var/tmp/scwrl_1329202899.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1329202899.pdb Number of alignments=27 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/T0359-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 1wf7A expands to /projects/compbio/data/pdb/1wf7.pdb.gz 1wf7A:# T0359 read from 1wf7A/T0359-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1wf7A read from 1wf7A/T0359-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1wf7A to template set # found chain 1wf7A in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1wf7A 3 :SGSSGSVSLVGPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAAK Number of specific fragments extracted= 3 number of extra gaps= 0 total=91 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1503885237.pdb -s /var/tmp/to_scwrl_1503885237.seq -o /var/tmp/from_scwrl_1503885237.pdb > /var/tmp/scwrl_1503885237.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1503885237.pdb Number of alignments=28 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n99A/T0359-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always 1n99A expands to /projects/compbio/data/pdb/1n99.pdb.gz 1n99A:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0359 read from 1n99A/T0359-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1n99A read from 1n99A/T0359-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # adding 1n99A to template set # found chain 1n99A in template set Warning: unaligning (T0359)T5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELT 1n99A 113 :REVILC T0359 12 :KNVQGLGITIAGY 1n99A 120 :DQDGKIGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQAFG T0359 84 :TVLL 1n99A 185 :KITM T0359 90 :MRRGE 1n99A 191 :RDRPF Number of specific fragments extracted= 6 number of extra gaps= 1 total=97 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1219407970.pdb -s /var/tmp/to_scwrl_1219407970.seq -o /var/tmp/from_scwrl_1219407970.pdb > /var/tmp/scwrl_1219407970.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1219407970.pdb Number of alignments=29 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0359-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2f0aA/T0359-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0359-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f0aA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVEL 2f0aA 252 :IITVTL T0359 16 :GLGITIAGYIGD 2f0aA 264 :FLGISIVGQSNE T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 276 :RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=101 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_2416949.pdb -s /var/tmp/to_scwrl_2416949.seq -o /var/tmp/from_scwrl_2416949.pdb > /var/tmp/scwrl_2416949.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_2416949.pdb Number of alignments=30 # command:# reading script from file T0359.undertaker-align.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/T0359-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2fe5A/T0359-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fe5A read from 2fe5A/T0359-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fe5A in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 247 :QHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=103 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_12260289.pdb -s /var/tmp/to_scwrl_12260289.seq -o /var/tmp/from_scwrl_12260289.pdb > /var/tmp/scwrl_12260289.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_12260289.pdb Number of alignments=31 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/T0359-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2fneA/T0359-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fneA read from 2fneA/T0359-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGSPH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2fneA 1982 :GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETS Number of specific fragments extracted= 2 number of extra gaps= 0 total=105 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_655495367.pdb -s /var/tmp/to_scwrl_655495367.seq -o /var/tmp/from_scwrl_655495367.pdb > /var/tmp/scwrl_655495367.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_655495367.pdb Number of alignments=32 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/T0359-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 1g9oA/T0359-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1g9oA read from 1g9oA/T0359-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1g9oA in training set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=108 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_561717988.pdb -s /var/tmp/to_scwrl_561717988.seq -o /var/tmp/from_scwrl_561717988.pdb > /var/tmp/scwrl_561717988.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_561717988.pdb Number of alignments=33 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/T0359-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 1tp5A/T0359-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1tp5A read from 1tp5A/T0359-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRR 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=111 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1407392291.pdb -s /var/tmp/to_scwrl_1407392291.seq -o /var/tmp/from_scwrl_1407392291.pdb > /var/tmp/scwrl_1407392291.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1407392291.pdb Number of alignments=34 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/T0359-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2fcfA/T0359-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2fcfA read from 2fcfA/T0359-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 1 :SMSETFDVELTKN 2fcfA 1145 :QSMQPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=114 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1841585794.pdb -s /var/tmp/to_scwrl_1841585794.seq -o /var/tmp/from_scwrl_1841585794.pdb > /var/tmp/scwrl_1841585794.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1841585794.pdb Number of alignments=35 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavA/T0359-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 1qavA/T0359-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1qavA read from 1qavA/T0359-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1qavA in template set T0359 1 :SMSETFDVELTKNVQG 1qavA 75 :GSLQRRRVTVRKADAG T0359 17 :LGITIAGYIG 1qavA 92 :LGISIKGGRE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1qavA 102 :NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 3 number of extra gaps= 0 total=117 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_389040743.pdb -s /var/tmp/to_scwrl_389040743.seq -o /var/tmp/from_scwrl_389040743.pdb > /var/tmp/scwrl_389040743.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_389040743.pdb Number of alignments=36 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2h2bA/T0359-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2h2bA/T0359-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2h2bA read from 2h2bA/T0359-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIGD 2h2bA 33 :GFGIAISGGRDN T0359 28 :KKLEPSGIFVKSITKSSAVE 2h2bA 47 :FQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGG Number of specific fragments extracted= 4 number of extra gaps= 0 total=121 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_733053144.pdb -s /var/tmp/to_scwrl_733053144.seq -o /var/tmp/from_scwrl_733053144.pdb > /var/tmp/scwrl_733053144.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_733053144.pdb Number of alignments=37 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2h3lA/T0359-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2h3lA/T0359-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2h3lA read from 2h3lA/T0359-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 T0359 4 :ETFDVELTKNV 2h3lA 1320 :QEIRVRVEKDP T0359 16 :GLGITIAGYIGDKKL 2h3lA 1331 :ELGFSISGGVGGRGN T0359 31 :EPSGIFVKSITKSSAVE 2h3lA 1350 :DDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1367 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 1 total=125 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1433102828.pdb -s /var/tmp/to_scwrl_1433102828.seq -o /var/tmp/from_scwrl_1433102828.pdb > /var/tmp/scwrl_1433102828.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1433102828.pdb Number of alignments=38 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/T0359-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 2f0aA/T0359-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 2f0aA read from 2f0aA/T0359-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVELT 2f0aA 252 :IITVTLN T0359 16 :GLGITIAGYIGDK 2f0aA 264 :FLGISIVGQSNER T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=129 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1887658389.pdb -s /var/tmp/to_scwrl_1887658389.seq -o /var/tmp/from_scwrl_1887658389.pdb > /var/tmp/scwrl_1887658389.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1887658389.pdb Number of alignments=39 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/T0359-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m with NO bystroff filtering # adding to alignment library always # T0359 read from 1wf7A/T0359-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # 1wf7A read from 1wf7A/T0359-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m # found chain 1wf7A in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1wf7A 3 :SGSSGSVSLVGPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAAK Number of specific fragments extracted= 3 number of extra gaps= 0 total=132 Will force an alignment to be made, even if fragment is small # request to SCWRL produces command: ulimit -t 88 ; scwrl3 -i /var/tmp/to_scwrl_1402961681.pdb -s /var/tmp/to_scwrl_1402961681.seq -o /var/tmp/from_scwrl_1402961681.pdb > /var/tmp/scwrl_1402961681.log # Trying to read SCWRLed conformation from /var/tmp/from_scwrl_1402961681.pdb Number of alignments=40 # command:Warning: Couldn't open file /projects/compbio/experiments/protein-predict/casp7/T0359//projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0359/manyalignments-local.under or /projects/compbio/experiments/protein-predict/casp7/T0359//projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0359/manyalignments-local.under.gz for input Trying /projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0359/manyalignments-local.under # reading script from file /projects/compbio/experiments/protein-predict/casp7/constraints_v2/T0359/manyalignments-local.under # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ky9B/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ky9B expands to /projects/compbio/data/pdb/1ky9.pdb.gz 1ky9B:# T0359 read from 1ky9B/merged-local-a2m # 1ky9B read from 1ky9B/merged-local-a2m # adding 1ky9B to template set # found chain 1ky9B in template set Warning: unaligning (T0359)F6 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G79 Warning: unaligning (T0359)K12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)A86 Warning: unaligning (T0359)V14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)A86 Warning: unaligning (T0359)L78 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0359)H80 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0359 4 :ET 1ky9B 49 :FF T0359 8 :VELT 1ky9B 80 :QQQK T0359 15 :QGLGITIAGY 1ky9B 87 :LGSGVIIDAD T0359 25 :IGDK 1ky9B 282 :VDAQ T0359 33 :SGIFVKSITKSSAVEHDG 1ky9B 286 :RGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEV 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQVG T0359 81 :TGQTVLLTLMRRGET 1ky9B 333 :VGSKLTLGLLRDGKQ Number of specific fragments extracted= 7 number of extra gaps= 0 total=139 Number of alignments=41 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0359)F6 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G79 Warning: unaligning (T0359)K12 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)A86 Warning: unaligning (T0359)V14 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)A86 Warning: unaligning (T0359)L78 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0359)H80 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0359 4 :ET 1ky9B 49 :FF T0359 8 :VELT 1ky9B 80 :QQQK T0359 15 :QGLGITIAGYIG 1ky9B 87 :LGSGVIIDADKG T0359 27 :DK 1ky9B 284 :AQ T0359 33 :SGIFVKSITKSSAVEHDG 1ky9B 286 :RGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEV 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQVG T0359 81 :TGQTVLLTLMRRGET 1ky9B 333 :VGSKLTLGLLRDGKQ Number of specific fragments extracted= 7 number of extra gaps= 0 total=146 Number of alignments=42 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0359)L78 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0359)H80 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0359 34 :GIFVKSITKSSAVEHDG 1ky9B 287 :GAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEV 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQVG T0359 81 :TGQTVLLTLMRRGE 1ky9B 333 :VGSKLTLGLLRDGK Number of specific fragments extracted= 3 number of extra gaps= 0 total=149 Number of alignments=43 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0359)L78 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0359)H80 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0359 33 :SGIFVKSITKSSAVEHDG 1ky9B 286 :RGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEV 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQVG T0359 81 :TGQTVLLTLMRRGE 1ky9B 333 :VGSKLTLGLLRDGK Number of specific fragments extracted= 3 number of extra gaps= 0 total=152 Number of alignments=44 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set T0359 30 :LEPSGIFVKSITKSSAVEHDG 1ky9B 283 :DAQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQG 1ky9B 304 :IKAGDVITSLNGKPISS T0359 71 :NQQAVEVLR 1ky9B 321 :FAALRAQVG T0359 82 :GQTVLLTLMRRGE 1ky9B 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 4 number of extra gaps= 0 total=156 Number of alignments=45 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)K281 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)K281 Warning: unaligning (T0359)H80 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 T0359 30 :LEPS 1ky9B 282 :VDAQ T0359 34 :GIFVKSITKSSAVEHDG 1ky9B 287 :GAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQG 1ky9B 304 :IKAGDVITSLNGKPISS T0359 71 :NQQAVEVLR 1ky9B 321 :FAALRAQVG T0359 82 :GQTVLLTLMRRGE 1ky9B 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 5 number of extra gaps= 0 total=161 Number of alignments=46 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0359)L78 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0359)H80 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0359 34 :GIFVKSITKSSAVEHDG 1ky9B 287 :GAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEV 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQVG T0359 81 :TGQTVLLTLMRRGE 1ky9B 333 :VGSKLTLGLLRDGK Number of specific fragments extracted= 3 number of extra gaps= 0 total=164 Number of alignments=47 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0359)L78 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 Warning: unaligning (T0359)H80 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)P332 T0359 34 :GIFVKSITKSSAVEHDG 1ky9B 287 :GAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEV 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQVG T0359 81 :TGQTVLLTLMRRGE 1ky9B 333 :VGSKLTLGLLRDGK Number of specific fragments extracted= 3 number of extra gaps= 0 total=167 Number of alignments=48 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0359)H80 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1ky9B 282 :VDAQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQG 1ky9B 304 :IKAGDVITSLNGKPISS T0359 71 :NQQAVEVLR 1ky9B 321 :FAALRAQVG T0359 82 :GQTVLLTLMRRGET 1ky9B 334 :GSKLTLGLLRDGKQ Number of specific fragments extracted= 4 number of extra gaps= 0 total=171 Number of alignments=49 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0359)I21 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G269 Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)G269 Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)K281 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)K281 Warning: unaligning (T0359)H80 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 T0359 18 :G 1ky9B 266 :G T0359 24 :YI 1ky9B 270 :TE T0359 30 :L 1ky9B 282 :V T0359 31 :EPSGIFVKSITKSSAVEHDG 1ky9B 284 :AQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQG 1ky9B 304 :IKAGDVITSLNGKPISS T0359 71 :NQQAVEVLR 1ky9B 321 :FAALRAQVG T0359 82 :GQTVLLTLMRRGET 1ky9B 334 :GSKLTLGLLRDGKQ Number of specific fragments extracted= 7 number of extra gaps= 0 total=178 Number of alignments=50 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set T0359 34 :GIFVKSITKSSAVEHDG 1ky9B 287 :GAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAV 1ky9B 304 :IKAGDVITSLNGKPISSFAALRAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=180 Number of alignments=51 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set T0359 32 :PSGIFVKSITKSSAVEHDG 1ky9B 285 :QRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQA 1ky9B 304 :IKAGDVITSLNGKPISSFAALRA Number of specific fragments extracted= 2 number of extra gaps= 0 total=182 Number of alignments=52 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0359)I19 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G269 Warning: unaligning (T0359)I21 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)G269 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)K281 T0359 22 :AGYIG 1ky9B 270 :TELNS T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1ky9B 282 :VDAQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQG 1ky9B 304 :IKAGDVITSLNGKPISS T0359 71 :NQQAVE 1ky9B 321 :FAALRA Number of specific fragments extracted= 4 number of extra gaps= 0 total=186 Number of alignments=53 # 1ky9B read from 1ky9B/merged-local-a2m # found chain 1ky9B in template set Warning: unaligning (T0359)I21 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)G269 Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ky9B)G269 Warning: unaligning (T0359)H80 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ky9B)P332 T0359 19 :IT 1ky9B 265 :LG T0359 24 :YIGDKK 1ky9B 270 :TELNSE T0359 30 :LEPSGIFVKSITKSSAVEHDG 1ky9B 283 :DAQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQG 1ky9B 304 :IKAGDVITSLNGKPISS T0359 71 :NQQAVEVLR 1ky9B 321 :FAALRAQVG T0359 81 :TGQTVLLTLMRRG 1ky9B 333 :VGSKLTLGLLRDG Number of specific fragments extracted= 6 number of extra gaps= 0 total=192 Number of alignments=54 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1um7A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1um7A expands to /projects/compbio/data/pdb/1um7.pdb.gz 1um7A:# T0359 read from 1um7A/merged-local-a2m # 1um7A read from 1um7A/merged-local-a2m # adding 1um7A to template set # found chain 1um7A in template set T0359 1 :SMSETFDVELTKNVQGLGITIAGYIG 1um7A 12 :DAREPRKIILHKGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1um7A 38 :GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=194 Number of alignments=55 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGY 1um7A 13 :AREPRKIILHKGSTGLGFNIVGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1um7A 36 :EDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=196 Number of alignments=56 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0359 1 :SMSETFDVELTKNVQGLGITIAGYIG 1um7A 12 :DAREPRKIILHKGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1um7A 38 :GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEY Number of specific fragments extracted= 2 number of extra gaps= 0 total=198 Number of alignments=57 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1um7A 13 :AREPRKIILHKGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1um7A 38 :GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=200 Number of alignments=58 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1um7A 13 :AREPRKIILHKGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1um7A 39 :EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=202 Number of alignments=59 # 1um7A read from 1um7A/merged-local-a2m # found chain 1um7A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1um7A 15 :EPRKIILHKGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1um7A 39 :EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=204 Number of alignments=60 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1bfeA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1bfeA expands to /projects/compbio/data/pdb/1bfe.pdb.gz 1bfeA:# T0359 read from 1bfeA/merged-local-a2m # 1bfeA read from 1bfeA/merged-local-a2m # adding 1bfeA to template set # found chain 1bfeA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1bfeA 310 :EPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=206 Number of alignments=61 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1bfeA 309 :REPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=208 Number of alignments=62 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 4 :ETFDVELTKNVQGLGITIAG 1bfeA 310 :EPRRIVIHRGSTGLGFNIIG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1bfeA 331 :EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=210 Number of alignments=63 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=212 Number of alignments=64 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 3 :SETFDVELTKNVQGLGITIAGY 1bfeA 309 :REPRRIVIHRGSTGLGFNIIGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1bfeA 331 :EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=214 Number of alignments=65 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGY 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1bfeA 331 :EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=216 Number of alignments=66 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYI 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1bfeA 332 :DGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=218 Number of alignments=67 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEY Number of specific fragments extracted= 2 number of extra gaps= 0 total=220 Number of alignments=68 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1bfeA 309 :REPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=222 Number of alignments=69 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=224 Number of alignments=70 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=226 Number of alignments=71 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1bfeA 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=228 Number of alignments=72 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1bfeA 310 :EPRRIVIHRGSTGLGFNIIGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1bfeA 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=230 Number of alignments=73 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1bfeA 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=232 Number of alignments=74 # 1bfeA read from 1bfeA/merged-local-a2m # found chain 1bfeA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1bfeA 308 :PREPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1bfeA 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=234 Number of alignments=75 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1m5zA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1m5zA expands to /projects/compbio/data/pdb/1m5z.pdb.gz 1m5zA:# T0359 read from 1m5zA/merged-local-a2m # 1m5zA read from 1m5zA/merged-local-a2m # adding 1m5zA to template set # found chain 1m5zA in template set T0359 4 :ETFDVELTKNVQ 1m5zA 21 :ELHKVTLYKDSG T0359 16 :GLGITIAGYIG 1m5zA 35 :DFGFSVADGLL T0359 32 :PSGIFVKSITKSSAVEHDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=238 Number of alignments=76 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0359 4 :ETFDVELTKNVQ 1m5zA 21 :ELHKVTLYKDSG T0359 16 :GLGITIAGYIG 1m5zA 35 :DFGFSVADGLL T0359 32 :PSGIFVKSITKSSAVEHDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=242 Number of alignments=77 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0359)G93 because last residue in template chain is (1m5zA)P106 T0359 4 :ETFDVELTKNVQ 1m5zA 21 :ELHKVTLYKDSG T0359 16 :GLGITIAG 1m5zA 35 :DFGFSVAD T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1m5zA 43 :GLLEKGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=246 Number of alignments=78 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0359 4 :ETFDVELTKNVQ 1m5zA 21 :ELHKVTLYKDSG T0359 16 :GLGITIAGY 1m5zA 35 :DFGFSVADG T0359 30 :LEPSGIFVKSITKSSAVEHDG 1m5zA 44 :LLEKGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=250 Number of alignments=79 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0359)G93 because last residue in template chain is (1m5zA)P106 T0359 2 :MSETFDVELTKNVQ 1m5zA 19 :PVELHKVTLYKDSG T0359 16 :GLGITIAGY 1m5zA 35 :DFGFSVADG T0359 30 :LEPSGIFVKSITKSSAVEHDG 1m5zA 44 :LLEKGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=254 Number of alignments=80 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0359 1 :SMSE 1m5zA 16 :SPTP T0359 5 :TFDVELTKNVQ 1m5zA 22 :LHKVTLYKDSG T0359 16 :GLGITIAGY 1m5zA 35 :DFGFSVADG T0359 30 :LEPSGIFVKSITKSSAVEHDG 1m5zA 44 :LLEKGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 5 number of extra gaps= 0 total=259 Number of alignments=81 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0359)G93 because last residue in template chain is (1m5zA)P106 T0359 4 :ETFDVELTKNVQ 1m5zA 21 :ELHKVTLYKDSG T0359 16 :GLGITIAGYIG 1m5zA 35 :DFGFSVADGLL T0359 32 :PSGIFVKSITKSSAVEHDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=263 Number of alignments=82 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0359 4 :ETFDVELTKNVQ 1m5zA 21 :ELHKVTLYKDSG T0359 16 :GLGITIAGYI 1m5zA 35 :DFGFSVADGL T0359 31 :EPSGIFVKSITKSSAVEHDG 1m5zA 45 :LEKGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=267 Number of alignments=83 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0359)G93 because last residue in template chain is (1m5zA)P106 T0359 2 :MSETFDVELTKNVQ 1m5zA 19 :PVELHKVTLYKDSG T0359 16 :GLGITIAGYI 1m5zA 35 :DFGFSVADGL T0359 31 :EPSGIFVKSITKSSAVEHDG 1m5zA 45 :LEKGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=271 Number of alignments=84 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0359 1 :SMS 1m5zA 16 :SPT T0359 4 :ETFDVELTKNVQ 1m5zA 21 :ELHKVTLYKDSG T0359 16 :GLGITIAGYIG 1m5zA 35 :DFGFSVADGLL T0359 32 :PSGIFVKSITKSSAVEHDG 1m5zA 46 :EKGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 5 number of extra gaps= 0 total=276 Number of alignments=85 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0359)G93 because last residue in template chain is (1m5zA)P106 T0359 6 :FDVELTKNVQGLGITIAGYIGD 1m5zA 25 :VTLYKDSGMEDFGFSVADGLLE T0359 33 :SGIFVKSITKSSAVEHDG 1m5zA 47 :KGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 3 number of extra gaps= 0 total=279 Number of alignments=86 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0359 7 :DVELTKNVQGLGITIAGYIGD 1m5zA 26 :TLYKDSGMEDFGFSVADGLLE T0359 33 :SGIFVKSITKSSAVEHDG 1m5zA 47 :KGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISR Number of specific fragments extracted= 3 number of extra gaps= 0 total=282 Number of alignments=87 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set Warning: unaligning (T0359)G93 because last residue in template chain is (1m5zA)P106 T0359 2 :MSETFDVELTKNV 1m5zA 19 :PVELHKVTLYKDS T0359 15 :QGLGITIAGYIGD 1m5zA 34 :EDFGFSVADGLLE T0359 33 :SGIFVKSITKSSAVEHDG 1m5zA 47 :KGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=286 Number of alignments=88 # 1m5zA read from 1m5zA/merged-local-a2m # found chain 1m5zA in template set T0359 2 :MSETFDVELTKNV 1m5zA 19 :PVELHKVTLYKDS T0359 15 :QGLGITIAGYIGD 1m5zA 34 :EDFGFSVADGLLE T0359 33 :SGIFVKSITKSSAVEHDG 1m5zA 47 :KGVYVKNIRPAGPGDLGG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1m5zA 65 :LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN Number of specific fragments extracted= 4 number of extra gaps= 0 total=290 Number of alignments=89 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1d5gA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1d5gA expands to /projects/compbio/data/pdb/1d5g.pdb.gz 1d5gA:# T0359 read from 1d5gA/merged-local-a2m # 1d5gA read from 1d5gA/merged-local-a2m # adding 1d5gA to template set # found chain 1d5gA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)T28 Warning: unaligning (T0359)Q83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0359)T84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0359 1 :SMSETFDVELTKN 1d5gA 2 :KPGDIFEVELAKN T0359 16 :GLGITIAGYI 1d5gA 17 :SLGISVTGGV T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1d5gA 29 :SVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0359 85 :VLLTLMRRGE 1d5gA 85 :VHLLLEKGQS Number of specific fragments extracted= 4 number of extra gaps= 3 total=294 # 1d5gA read from 1d5gA/merged-local-a2m # found chain 1d5gA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)T28 Warning: unaligning (T0359)Q83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0359)T84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0359 2 :MSETFDVELTKN 1d5gA 3 :PGDIFEVELAKN T0359 16 :GLGITIAGYI 1d5gA 17 :SLGISVTGGV T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1d5gA 29 :SVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0359 85 :VLLTLMRR 1d5gA 85 :VHLLLEKG Number of specific fragments extracted= 4 number of extra gaps= 3 total=298 # 1d5gA read from 1d5gA/merged-local-a2m # found chain 1d5gA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)T28 Warning: unaligning (T0359)Q83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0359)T84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0359 1 :SMSETFDVELTKN 1d5gA 2 :KPGDIFEVELAKN T0359 16 :GLGITIAGYI 1d5gA 17 :SLGISVTGGV T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1d5gA 29 :SVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0359 85 :VLLTLMRRGET 1d5gA 85 :VHLLLEKGQSP Number of specific fragments extracted= 4 number of extra gaps= 3 total=302 # 1d5gA read from 1d5gA/merged-local-a2m # found chain 1d5gA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)T28 Warning: unaligning (T0359)Q83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0359)T84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0359 2 :MSETFDVELTKN 1d5gA 3 :PGDIFEVELAKN T0359 16 :GLGITIAGYI 1d5gA 17 :SLGISVTGGV T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1d5gA 29 :SVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0359 85 :VLLTLMRR 1d5gA 85 :VHLLLEKG Number of specific fragments extracted= 4 number of extra gaps= 3 total=306 # 1d5gA read from 1d5gA/merged-local-a2m # found chain 1d5gA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)T28 Warning: unaligning (T0359)Q83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0359)T84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0359 2 :MSETFDVELTKN 1d5gA 3 :PGDIFEVELAKN T0359 16 :GLGITIAGYI 1d5gA 17 :SLGISVTGGV T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1d5gA 29 :SVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0359 85 :VLLTL 1d5gA 85 :VHLLL Number of specific fragments extracted= 4 number of extra gaps= 3 total=310 # 1d5gA read from 1d5gA/merged-local-a2m # found chain 1d5gA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)N16 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)N16 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)T28 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)T28 Warning: unaligning (T0359)Q83 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1d5gA)V84 Warning: unaligning (T0359)T84 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1d5gA)V84 T0359 4 :ETFDVELTKN 1d5gA 5 :DIFEVELAKN T0359 16 :GLGITIAGYI 1d5gA 17 :SLGISVTGGV T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1d5gA 29 :SVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG T0359 85 :VLLTL 1d5gA 85 :VHLLL Number of specific fragments extracted= 4 number of extra gaps= 3 total=314 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1qavA/merged-local-a2m # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 6 :FDVELTKN 1qavA 80 :RRVTVRKA T0359 14 :VQGLGITIAGY 1qavA 89 :AGGLGISIKGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1qavA 101 :ENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 3 number of extra gaps= 0 total=317 Number of alignments=90 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 1 :SMSETFDVELTKNV 1qavA 75 :GSLQRRRVTVRKAD T0359 15 :QGLGITIAGYIG 1qavA 90 :GGLGISIKGGRE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1qavA 102 :NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVK Number of specific fragments extracted= 3 number of extra gaps= 0 total=320 Number of alignments=91 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 4 :ETFDVELTKNV 1qavA 78 :QRRRVTVRKAD T0359 15 :QGLGITIAGYIG 1qavA 90 :GGLGISIKGGRE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1qavA 102 :NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVK Number of specific fragments extracted= 3 number of extra gaps= 0 total=323 Number of alignments=92 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set Warning: unaligning (T0359)G93 because last residue in template chain is (1qavA)K164 T0359 4 :ETFDVELTK 1qavA 78 :QRRRVTVRK T0359 13 :NVQGLGITIAGYIGDKK 1qavA 88 :DAGGLGISIKGGRENKM T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1qavA 105 :PILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 3 number of extra gaps= 0 total=326 Number of alignments=93 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 4 :ETFDVELTK 1qavA 78 :QRRRVTVRK T0359 13 :NVQGLGITIAGYIGDKK 1qavA 88 :DAGGLGISIKGGRENKM T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1qavA 105 :PILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 3 number of extra gaps= 0 total=329 Number of alignments=94 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 2 :MSETFDVELTKNV 1qavA 76 :SLQRRRVTVRKAD T0359 15 :QGLGITIAGYIGD 1qavA 90 :GGLGISIKGGREN T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1qavA 103 :KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEV Number of specific fragments extracted= 3 number of extra gaps= 0 total=332 Number of alignments=95 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 4 :ETFDVELTKNV 1qavA 78 :QRRRVTVRKAD T0359 15 :QGLGITIAGYIGD 1qavA 90 :GGLGISIKGGREN T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1qavA 103 :KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVK Number of specific fragments extracted= 3 number of extra gaps= 0 total=335 Number of alignments=96 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 4 :ETFDVELTK 1qavA 78 :QRRRVTVRK T0359 13 :NVQGLGITIAGY 1qavA 88 :DAGGLGISIKGG T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1qavA 100 :RENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 3 number of extra gaps= 0 total=338 Number of alignments=97 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 4 :ETFDVELTKNV 1qavA 78 :QRRRVTVRKAD T0359 15 :QGLGITIAGY 1qavA 90 :GGLGISIKGG T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1qavA 100 :RENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 3 number of extra gaps= 0 total=341 Number of alignments=98 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 1 :SMSETFDVELTKNV 1qavA 75 :GSLQRRRVTVRKAD T0359 15 :QGLGITIAGY 1qavA 90 :GGLGISIKGG T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1qavA 100 :RENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 3 number of extra gaps= 0 total=344 Number of alignments=99 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 2 :MSETFDVELTKNVQ 1qavA 76 :SLQRRRVTVRKADA T0359 16 :GLGITIAGY 1qavA 91 :GLGISIKGG T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1qavA 100 :RENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 3 number of extra gaps= 0 total=347 Number of alignments=100 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 4 :ETFDVELTKNV 1qavA 78 :QRRRVTVRKAD T0359 15 :QGLGITIAGYIG 1qavA 90 :GGLGISIKGGRE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1qavA 102 :NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEV Number of specific fragments extracted= 3 number of extra gaps= 0 total=350 Number of alignments=101 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 5 :TFDVELTKNV 1qavA 79 :RRRVTVRKAD T0359 15 :QGLGITIAGYIG 1qavA 90 :GGLGISIKGGRE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1qavA 102 :NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 3 number of extra gaps= 0 total=353 Number of alignments=102 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 1 :SMSETFDVELTKNV 1qavA 75 :GSLQRRRVTVRKAD T0359 15 :QGLGITIAGYIG 1qavA 90 :GGLGISIKGGRE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1qavA 102 :NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 3 number of extra gaps= 0 total=356 Number of alignments=103 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 1 :SMSETFDVELTKNVQG 1qavA 75 :GSLQRRRVTVRKADAG T0359 17 :LGITIAGYIG 1qavA 92 :LGISIKGGRE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1qavA 102 :NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 3 number of extra gaps= 0 total=359 Number of alignments=104 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set Warning: unaligning (T0359)G93 because last residue in template chain is (1qavA)K164 T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1qavA 77 :LQRRRVTVRKADAGGLGISIKGGREN T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1qavA 103 :KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 2 number of extra gaps= 0 total=361 Number of alignments=105 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1qavA 79 :RRRVTVRKADAGGLGISIKGGREN T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1qavA 103 :KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 2 number of extra gaps= 0 total=363 Number of alignments=106 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set Warning: unaligning (T0359)G93 because last residue in template chain is (1qavA)K164 T0359 1 :SMSETFDVELTKNVQGLGITIAGYIGD 1qavA 76 :SLQRRRVTVRKADAGGLGISIKGGREN T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1qavA 103 :KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM Number of specific fragments extracted= 2 number of extra gaps= 0 total=365 Number of alignments=107 # 1qavA read from 1qavA/merged-local-a2m # found chain 1qavA in template set T0359 2 :MSETFDVELT 1qavA 76 :SLQRRRVTVR T0359 12 :KNVQGLGITIAGYIGD 1qavA 87 :ADAGGLGISIKGGREN T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1qavA 103 :KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY Number of specific fragments extracted= 3 number of extra gaps= 0 total=368 Number of alignments=108 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qavB/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1qavB expands to /projects/compbio/data/pdb/1qav.pdb.gz 1qavB:# T0359 read from 1qavB/merged-local-a2m # 1qavB read from 1qavB/merged-local-a2m # adding 1qavB to template set # found chain 1qavB in template set T0359 6 :FDVELTKN 1qavB 1016 :ISVRLFKR T0359 14 :VQGLGITIAGY 1qavB 1025 :VGGLGFLVKER T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1qavB 1036 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA T0359 83 :QTVLLTLMRRGET 1qavB 1091 :THVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=372 Number of alignments=109 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0359 4 :ETFDVELTKNVQ 1qavB 1014 :NVISVRLFKRKV T0359 16 :GLGITIAGYIG 1qavB 1027 :GLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGET 1qavB 1089 :SETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=376 Number of alignments=110 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0359 4 :ETFDVELTKNVQ 1qavB 1014 :NVISVRLFKRKV T0359 16 :GLGITIAGYIG 1qavB 1027 :GLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGET 1qavB 1089 :SETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=380 Number of alignments=111 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0359 3 :SETFDVELTKNV 1qavB 1013 :PNVISVRLFKRK T0359 15 :QGLGITIAG 1qavB 1026 :GGLGFLVKE T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qavB 1035 :RVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1qavB 1090 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=384 Number of alignments=112 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0359 3 :SETFDVELTKNV 1qavB 1013 :PNVISVRLFKRK T0359 15 :QGLGITIAGY 1qavB 1026 :GGLGFLVKER T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qavB 1036 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRG 1qavB 1090 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=388 Number of alignments=113 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1qavB)Q1012 T0359 3 :SETFDVELTKNV 1qavB 1013 :PNVISVRLFKRK T0359 15 :QGLGITIAG 1qavB 1026 :GGLGFLVKE T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qavB 1035 :RVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1qavB 1090 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=392 Number of alignments=114 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1qavB)Q1012 T0359 3 :SETFDVELTKNVQ 1qavB 1013 :PNVISVRLFKRKV T0359 16 :GLGITIAGY 1qavB 1027 :GLGFLVKER T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qavB 1036 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1qavB 1090 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=396 Number of alignments=115 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0359 3 :SETFDVELTKNV 1qavB 1013 :PNVISVRLFKRK T0359 15 :QGLGITIAGYIG 1qavB 1026 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGETS 1qavB 1089 :SETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=400 Number of alignments=116 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0359 3 :SETFDVELTKNV 1qavB 1013 :PNVISVRLFKRK T0359 15 :QGLGITIAGYIG 1qavB 1026 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRR 1qavB 1090 :ETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=404 Number of alignments=117 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1qavB)Q1012 T0359 3 :SETFDVELTKNV 1qavB 1013 :PNVISVRLFKRK T0359 15 :QGLGITIAGYIG 1qavB 1026 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGET 1qavB 1090 :ETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=408 Number of alignments=118 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1qavB)Q1012 T0359 3 :SETFDVELTKNV 1qavB 1013 :PNVISVRLFKRK T0359 15 :QGLGITIAGYIG 1qavB 1026 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qavB 1038 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGET 1qavB 1090 :ETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=412 Number of alignments=119 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1qavB 1013 :PNVISVRLFKRKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1qavB 1039 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGP Number of specific fragments extracted= 2 number of extra gaps= 0 total=414 Number of alignments=120 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1qavB 1016 :ISVRLFKRKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1qavB 1039 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGP Number of specific fragments extracted= 2 number of extra gaps= 0 total=416 Number of alignments=121 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1qavB 1013 :PNVISVRLFKRKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1qavB 1039 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILR Number of specific fragments extracted= 2 number of extra gaps= 0 total=418 Number of alignments=122 # 1qavB read from 1qavB/merged-local-a2m # found chain 1qavB in template set T0359 3 :SETFDVELT 1qavB 1013 :PNVISVRLF T0359 12 :KNVQGLGITIAGYIGD 1qavB 1023 :RKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQT 1qavB 1039 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASE T0359 85 :VLLTLMRRGE 1qavB 1093 :VVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=422 Number of alignments=123 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1pdr/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1pdr expands to /projects/compbio/data/pdb/1pdr.pdb.gz 1pdr:Warning: there is no chain 1pdr will retry with 1pdrA # T0359 read from 1pdr/merged-local-a2m # 1pdr read from 1pdr/merged-local-a2m # adding 1pdr to template set # found chain 1pdr in template set T0359 4 :ETFDVELTKNVQGLGITIAG 1pdr 463 :EPRKVVLHRGSTGLGFNIVG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1pdr 484 :EDGEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRP Number of specific fragments extracted= 2 number of extra gaps= 0 total=424 Number of alignments=124 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1pdr 463 :EPRKVVLHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=426 Number of alignments=125 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1pdr 463 :EPRKVVLHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=428 Number of alignments=126 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1pdr 462 :REPRKVVLHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=430 Number of alignments=127 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 3 :SETFDVELTKNVQGLGITIAGY 1pdr 462 :REPRKVVLHRGSTGLGFNIVGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1pdr 484 :EDGEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=432 Number of alignments=128 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 2 :MSETFDVELTKNVQGLGITIAGY 1pdr 461 :TREPRKVVLHRGSTGLGFNIVGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1pdr 484 :EDGEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=434 Number of alignments=129 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 1 :SMSETFDVELTKNVQGLGITIAGY 1pdr 460 :ITREPRKVVLHRGSTGLGFNIVGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1pdr 484 :EDGEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=436 Number of alignments=130 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1pdr 462 :REPRKVVLHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPEEY Number of specific fragments extracted= 2 number of extra gaps= 0 total=438 Number of alignments=131 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1pdr 462 :REPRKVVLHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=440 Number of alignments=132 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1pdr 461 :TREPRKVVLHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=442 Number of alignments=133 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1pdr 461 :TREPRKVVLHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1pdr 486 :GEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=444 Number of alignments=134 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1pdr 462 :REPRKVVLHRGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1pdr 487 :EGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=446 Number of alignments=135 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1pdr 463 :EPRKVVLHRGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1pdr 487 :EGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=448 Number of alignments=136 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 1 :SMSETFDVELTKNVQGLGITIAGYIGD 1pdr 460 :ITREPRKVVLHRGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1pdr 487 :EGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=450 Number of alignments=137 # 1pdr read from 1pdr/merged-local-a2m # found chain 1pdr in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1pdr 461 :TREPRKVVLHRGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1pdr 487 :EGIFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYR Number of specific fragments extracted= 2 number of extra gaps= 0 total=452 Number of alignments=138 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1fc6A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1fc6A/merged-local-a2m # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 12 :KNVQGLGITIAGYIGDKK 1fc6A 158 :GSVTGVGLEITYDGGSGK T0359 34 :GIFVKSITKSSAVEHD 1fc6A 176 :DVVVLTPAPGGPAEKA T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 1fc6A 192 :GARAGDVIVTVDGTAVKGMSLYDVSDLLQGEAD T0359 84 :TV 1fc6A 226 :QV Number of specific fragments extracted= 4 number of extra gaps= 0 total=456 Number of alignments=139 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 2 :MSETFDVELTKNVQ 1fc6A 149 :LAALRRGTAGSVTG T0359 16 :GLGITIAGYIG 1fc6A 164 :GLEITYDGGSG T0359 33 :SGIFVKSITKSSAVEHDG 1fc6A 175 :KDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0359 82 :GQTVLLTLMRRGETS 1fc6A 224 :DSQVEVVLHAPGAPS Number of specific fragments extracted= 5 number of extra gaps= 0 total=461 Number of alignments=140 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 3 :SETFDVELTKNVQ 1fc6A 150 :AALRRGTAGSVTG T0359 16 :GLGITIAGYIG 1fc6A 164 :GLEITYDGGSG T0359 33 :SGIFVKSITKSSAVEHDG 1fc6A 175 :KDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0359 82 :GQTVLLTLMRRGET 1fc6A 224 :DSQVEVVLHAPGAP Number of specific fragments extracted= 5 number of extra gaps= 0 total=466 Number of alignments=141 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1fc6A 150 :AALRRGTAGSVTGVGLEITYDGG T0359 31 :EPSGIFVKSITKSSAVEHDG 1fc6A 173 :SGKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLR 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQ T0359 80 :HTGQTVLLTLMRRG 1fc6A 222 :EADSQVEVVLHAPG Number of specific fragments extracted= 4 number of extra gaps= 0 total=470 Number of alignments=142 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1fc6A 150 :AALRRGTAGSVTGVGLEITYDGG T0359 31 :EPSGIFVKSITKSSAVEHDG 1fc6A 173 :SGKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLR 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQ T0359 80 :HTGQTVLLTLMRRGE 1fc6A 222 :EADSQVEVVLHAPGA Number of specific fragments extracted= 4 number of extra gaps= 0 total=474 Number of alignments=143 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDK 1fc6A 150 :AALRRGTAGSVTGVGLEITYDGGSG T0359 33 :SGIFVKSITKSSAVEHDG 1fc6A 175 :KDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRH 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQG T0359 81 :TGQTVLLTLMRRGE 1fc6A 223 :ADSQVEVVLHAPGA Number of specific fragments extracted= 4 number of extra gaps= 0 total=478 Number of alignments=144 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 5 :TFDVELTKNVQGLGITIAGYIG 1fc6A 151 :ALRRGTAGSVTGVGLEITYDGG T0359 33 :SGIFVKSITKSSAVEHDG 1fc6A 175 :KDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRH 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQG T0359 81 :TGQTVLLTLMRRGE 1fc6A 223 :ADSQVEVVLHAPGA Number of specific fragments extracted= 4 number of extra gaps= 0 total=482 Number of alignments=145 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 16 :GLGITIAGY 1fc6A 162 :GVGLEITYD T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1fc6A 171 :GGSGKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRH 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQG Number of specific fragments extracted= 3 number of extra gaps= 0 total=485 Number of alignments=146 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 7 :DVELTKNVQ 1fc6A 149 :LAALRRGTA T0359 16 :GLGITIAGY 1fc6A 162 :GVGLEITYD T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1fc6A 171 :GGSGKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0359 82 :GQTVLLTL 1fc6A 224 :DSQVEVVL Number of specific fragments extracted= 5 number of extra gaps= 0 total=490 Number of alignments=147 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 16 :GLGITIAGY 1fc6A 162 :GVGLEITYD T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1fc6A 171 :GGSGKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVL 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0359 79 :RHTGQTVLLTLMRRGE 1fc6A 221 :GEADSQVEVVLHAPGA Number of specific fragments extracted= 4 number of extra gaps= 0 total=494 Number of alignments=148 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 13 :NVQ 1fc6A 157 :AGS T0359 16 :GLGITIAGY 1fc6A 162 :GVGLEITYD T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1fc6A 171 :GGSGKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVL 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0359 81 :TGQTVLLTLMRRG 1fc6A 223 :ADSQVEVVLHAPG Number of specific fragments extracted= 5 number of extra gaps= 0 total=499 Number of alignments=149 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 16 :GLGITIAGYIG 1fc6A 162 :GVGLEITYDGG T0359 31 :EPSGIFVKSITKSSAVEHDG 1fc6A 173 :SGKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRH 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQG Number of specific fragments extracted= 3 number of extra gaps= 0 total=502 Number of alignments=150 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 6 :FDVELTKNVQ 1fc6A 148 :RLAALRRGTA T0359 16 :GLGITIAGYIG 1fc6A 162 :GVGLEITYDGG T0359 31 :EPSGIFVKSITKSSAVEHDG 1fc6A 173 :SGKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0359 82 :GQTVLLTL 1fc6A 224 :DSQVEVVL Number of specific fragments extracted= 5 number of extra gaps= 0 total=507 Number of alignments=151 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 15 :QGLGITIAGYIG 1fc6A 161 :TGVGLEITYDGG T0359 31 :EPSGIFVKSITKSSAVEHDG 1fc6A 173 :SGKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE T0359 82 :GQTVLLTLMRRGET 1fc6A 224 :DSQVEVVLHAPGAP Number of specific fragments extracted= 4 number of extra gaps= 0 total=511 Number of alignments=152 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 13 :NVQ 1fc6A 157 :AGS T0359 16 :GLGITIAGYIG 1fc6A 162 :GVGLEITYDGG T0359 31 :EPSGIFVKSITKSSAVEHDG 1fc6A 173 :SGKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVL 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0359 81 :TGQTVLLTLMRRG 1fc6A 223 :ADSQVEVVLHAPG Number of specific fragments extracted= 5 number of extra gaps= 0 total=516 Number of alignments=153 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 16 :GLGITIAGYIGD 1fc6A 162 :GVGLEITYDGGS T0359 32 :PSGIFVKSITKSSAVEHDG 1fc6A 174 :GKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPG Number of specific fragments extracted= 3 number of extra gaps= 0 total=519 Number of alignments=154 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 13 :NVQGLGITIAGYIGD 1fc6A 159 :SVTGVGLEITYDGGS T0359 32 :PSGIFVKSITKSSAVEHDG 1fc6A 174 :GKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAP Number of specific fragments extracted= 3 number of extra gaps= 0 total=522 Number of alignments=155 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 12 :KNVQGLGITIAGYIGD 1fc6A 158 :GSVTGVGLEITYDGGS T0359 32 :PSGIFVKSITKSSAVEHDG 1fc6A 174 :GKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLR 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLLQ T0359 80 :HTGQTVLLTLMRRG 1fc6A 222 :EADSQVEVVLHAPG Number of specific fragments extracted= 4 number of extra gaps= 0 total=526 Number of alignments=156 # 1fc6A read from 1fc6A/merged-local-a2m # found chain 1fc6A in training set T0359 12 :KNVQGLGITIAGYIGD 1fc6A 158 :GSVTGVGLEITYDGGS T0359 32 :PSGIFVKSITKSSAVEHDG 1fc6A 174 :GKDVVVLTPAPGGPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVL 1fc6A 193 :ARAGDVIVTVDGTAVKGMSLYDVSDLL T0359 79 :RHTGQTVLLTLMR 1fc6A 221 :GEADSQVEVVLHA Number of specific fragments extracted= 4 number of extra gaps= 0 total=530 Number of alignments=157 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n7eA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1n7eA expands to /projects/compbio/data/pdb/1n7e.pdb.gz 1n7eA:# T0359 read from 1n7eA/merged-local-a2m # 1n7eA read from 1n7eA/merged-local-a2m # adding 1n7eA to template set # found chain 1n7eA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1n7eA 669 :IIYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7eA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=532 Number of alignments=158 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1n7eA 669 :IIYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1n7eA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD Number of specific fragments extracted= 2 number of extra gaps= 0 total=534 Number of alignments=159 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEEP T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1n7eA 693 :FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD Number of specific fragments extracted= 2 number of extra gaps= 0 total=536 Number of alignments=160 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1n7eA 669 :IIYTVELKRYGGPLGITISGTEEP T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1n7eA 693 :FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD Number of specific fragments extracted= 2 number of extra gaps= 0 total=538 Number of alignments=161 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1n7eA 669 :IIYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1n7eA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD Number of specific fragments extracted= 2 number of extra gaps= 0 total=540 Number of alignments=162 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 6 :FDVELTKNVQGLGITIAGYIG 1n7eA 671 :YTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1n7eA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD Number of specific fragments extracted= 2 number of extra gaps= 0 total=542 Number of alignments=163 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 5 :TFDVELTKNVQGLGITIAGY 1n7eA 670 :IYTVELKRYGGPLGITISGT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1n7eA 690 :EEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD Number of specific fragments extracted= 2 number of extra gaps= 0 total=544 Number of alignments=164 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 5 :TFDVELTKNVQGLGITIAGY 1n7eA 670 :IYTVELKRYGGPLGITISGT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1n7eA 690 :EEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD Number of specific fragments extracted= 2 number of extra gaps= 0 total=546 Number of alignments=165 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1n7eA)G667 T0359 3 :SETFDVELTKNVQGLGITIAGY 1n7eA 668 :AIIYTVELKRYGGPLGITISGT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1n7eA 690 :EEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD T0359 96 :SV 1n7eA 757 :QP Number of specific fragments extracted= 3 number of extra gaps= 0 total=549 Number of alignments=166 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1n7eA)G667 T0359 3 :SETFDVELTKNVQGLGITIAGY 1n7eA 668 :AIIYTVELKRYGGPLGITISGT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1n7eA 690 :EEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD T0359 96 :SV 1n7eA 758 :PA Number of specific fragments extracted= 3 number of extra gaps= 0 total=552 Number of alignments=167 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIG 1n7eA 670 :IYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1n7eA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD Number of specific fragments extracted= 2 number of extra gaps= 0 total=554 Number of alignments=168 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIG 1n7eA 670 :IYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1n7eA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQT Number of specific fragments extracted= 2 number of extra gaps= 0 total=556 Number of alignments=169 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1n7eA)G667 T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1n7eA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=558 Number of alignments=170 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1n7eA)G667 T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1n7eA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQP Number of specific fragments extracted= 2 number of extra gaps= 0 total=560 Number of alignments=171 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1n7eA 669 :IIYTVELKRYGGPLGITISGTEEP T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1n7eA 693 :FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKI Number of specific fragments extracted= 2 number of extra gaps= 0 total=562 Number of alignments=172 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1n7eA 669 :IIYTVELKRYGGPLGITISGTEEP T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1n7eA 693 :FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=564 Number of alignments=173 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1n7eA)G667 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEEP T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1n7eA 693 :FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQP Number of specific fragments extracted= 2 number of extra gaps= 0 total=566 Number of alignments=174 # 1n7eA read from 1n7eA/merged-local-a2m # found chain 1n7eA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1n7eA)G667 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1n7eA 668 :AIIYTVELKRYGGPLGITISGTEEP T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1n7eA 693 :FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQP Number of specific fragments extracted= 2 number of extra gaps= 0 total=568 Number of alignments=175 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1nf3C/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1nf3C expands to /projects/compbio/data/pdb/1nf3.pdb.gz 1nf3C:# T0359 read from 1nf3C/merged-local-a2m # 1nf3C read from 1nf3C/merged-local-a2m # adding 1nf3C to template set # found chain 1nf3C in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1nf3C)N253 T0359 1 :SMSETFDVELTKNVQGLGITIAGYIGDKKL 1nf3C 153 :ETHRRVRLCKYGTEKPLGFYIRDGSSVRVT T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1nf3C 188 :KVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=570 Number of alignments=176 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDK 1nf3C 156 :RRVRLCKYGTEKPLGFYIRDGSSVR T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1nf3C 186 :LEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=572 Number of alignments=177 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1nf3C)N253 T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKLEPS 1nf3C 156 :RRVRLCKYGTEKPLGFYIRDGSSVRVTPHG T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=574 Number of alignments=178 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKLEPS 1nf3C 156 :RRVRLCKYGTEKPLGFYIRDGSSVRVTPHG T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=576 Number of alignments=179 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0359 4 :ETFDVELTK 1nf3C 154 :THRRVRLCK T0359 13 :NVQGLGITIAGYIG 1nf3C 165 :TEKPLGFYIRDGSS T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1nf3C 184 :HGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=579 Number of alignments=180 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0359 4 :ETFDVELTK 1nf3C 154 :THRRVRLCK T0359 13 :NVQGLGITIAGYIG 1nf3C 165 :TEKPLGFYIRDGSS T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1nf3C 184 :HGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=582 Number of alignments=181 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0359 6 :FDVELTKNV 1nf3C 156 :RRVRLCKYG T0359 15 :QGLGITIAGYIGDKKLEPS 1nf3C 167 :KPLGFYIRDGSSVRVTPHG T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRP Number of specific fragments extracted= 3 number of extra gaps= 0 total=585 Number of alignments=182 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0359 5 :TFDVELTKNV 1nf3C 155 :HRRVRLCKYG T0359 15 :QGLGITIAGYIGDKKLEP 1nf3C 167 :KPLGFYIRDGSSVRVTPH T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=588 Number of alignments=183 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1nf3C)N253 T0359 2 :MSETFDVELTKNVQ 1nf3C 152 :PETHRRVRLCKYGT T0359 16 :GLGITIAGYIG 1nf3C 168 :PLGFYIRDGSS T0359 27 :DKKLEP 1nf3C 183 :PHGLEK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1nf3C 190 :PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 4 number of extra gaps= 0 total=592 Number of alignments=184 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1nf3C)N253 T0359 2 :MSETFDVELTKNVQ 1nf3C 152 :PETHRRVRLCKYGT T0359 16 :GLGITIAGYIG 1nf3C 168 :PLGFYIRDGSS T0359 27 :DKKLEP 1nf3C 183 :PHGLEK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1nf3C 190 :PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 4 number of extra gaps= 0 total=596 Number of alignments=185 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0359 2 :MSETFDVELTKNV 1nf3C 152 :PETHRRVRLCKYG T0359 15 :QGLGITIAGYIGDKKLEPS 1nf3C 167 :KPLGFYIRDGSSVRVTPHG T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRP Number of specific fragments extracted= 3 number of extra gaps= 0 total=599 Number of alignments=186 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0359 5 :TFDVELTKNV 1nf3C 155 :HRRVRLCKYG T0359 15 :QGLGITIAGYIGDKKLEPS 1nf3C 167 :KPLGFYIRDGSSVRVTPHG T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPAN Number of specific fragments extracted= 3 number of extra gaps= 0 total=602 Number of alignments=187 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1nf3C)N253 T0359 2 :MSETFDVELTKNV 1nf3C 152 :PETHRRVRLCKYG T0359 15 :QGLGITIAGYIGDKKLEPS 1nf3C 167 :KPLGFYIRDGSSVRVTPHG T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1nf3C 191 :GIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=605 Number of alignments=188 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1nf3C)N253 T0359 2 :MSETFDVELTKNV 1nf3C 152 :PETHRRVRLCKYG T0359 15 :QGLGITIAGYI 1nf3C 167 :KPLGFYIRDGS T0359 26 :GDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1nf3C 183 :PHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=608 Number of alignments=189 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1nf3C 156 :RRVRLCKYGTEKPLGFYIRDGSS T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1nf3C 184 :HGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=610 Number of alignments=190 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set T0359 6 :FDVELTKNVQGLGITIAGYIG 1nf3C 158 :VRLCKYGTEKPLGFYIRDGSS T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1nf3C 184 :HGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPA Number of specific fragments extracted= 2 number of extra gaps= 0 total=612 Number of alignments=191 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1nf3C)N253 T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1nf3C 155 :HRRVRLCKYGTEKPLGFYIRDGSS T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1nf3C 184 :HGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 2 number of extra gaps= 0 total=614 Number of alignments=192 # 1nf3C read from 1nf3C/merged-local-a2m # found chain 1nf3C in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1nf3C)N253 T0359 4 :ETFDVELT 1nf3C 154 :THRRVRLC T0359 12 :KNVQGLGITIAGYIG 1nf3C 164 :GTEKPLGFYIRDGSS T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1nf3C 184 :HGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=617 Number of alignments=193 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1r6jA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1r6jA/merged-local-a2m # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 1 :SMSETFDVELTKNVQG 1r6jA 192 :GAMDPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 0 total=621 Number of alignments=194 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 3 :SETFDVELTKNVQG 1r6jA 194 :MDPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 0 total=625 Number of alignments=195 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 1 :SMSETFDVELTKNVQG 1r6jA 192 :GAMDPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 0 total=629 Number of alignments=196 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 3 :SETFDVELTKNVQG 1r6jA 194 :MDPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 0 total=633 Number of alignments=197 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 4 :ETFDVELTKNV 1r6jA 195 :DPRTITMHKDS T0359 15 :QGLGITIA 1r6jA 207 :GHVGFIFK T0359 34 :GIFVKSITKSSAVEHDG 1r6jA 215 :NGKITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 0 total=637 Number of alignments=198 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 5 :TFDVELTKNV 1r6jA 196 :PRTITMHKDS T0359 15 :QGLGITIA 1r6jA 207 :GHVGFIFK T0359 34 :GIFVKSITKSSAVEHDG 1r6jA 215 :NGKITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 0 total=641 Number of alignments=199 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set Warning: unaligning (T0359)G93 because last residue in template chain is (1r6jA)F273 T0359 1 :SMSETFDVELTKNVQG 1r6jA 192 :GAMDPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 0 total=645 Number of alignments=200 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 3 :SETFDVELTKNVQG 1r6jA 194 :MDPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 0 total=649 Number of alignments=201 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set Warning: unaligning (T0359)G93 because last residue in template chain is (1r6jA)F273 T0359 1 :SMSETFDVELTKNVQG 1r6jA 192 :GAMDPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 0 total=653 Number of alignments=202 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 1 :SMSETFDVELTKNVQ 1r6jA 192 :GAMDPRTITMHKDST T0359 16 :GLGITIAGY 1r6jA 208 :HVGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 0 total=657 Number of alignments=203 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 4 :ETFDVELTKNVQG 1r6jA 195 :DPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 0 total=661 Number of alignments=204 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 4 :ETFDVELTKNVQG 1r6jA 195 :DPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 0 total=665 Number of alignments=205 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set Warning: unaligning (T0359)G93 because last residue in template chain is (1r6jA)F273 T0359 1 :SMSETFDVELTKNVQG 1r6jA 192 :GAMDPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 0 total=669 Number of alignments=206 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 1 :SMSETFDVELTKNVQG 1r6jA 192 :GAMDPRTITMHKDSTG T0359 17 :LGITIAGY 1r6jA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 0 total=673 Number of alignments=207 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 2 :MSETFDVELTKNVQGLGITIAGY 1r6jA 194 :MDPRTITMHKDSTGHVGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 0 total=676 Number of alignments=208 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 4 :ETFDVELTKNVQGLGITIAGYI 1r6jA 196 :PRTITMHKDSTGHVGFIFKNGK T0359 37 :VKSITKSSAVEHDG 1r6jA 218 :ITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM Number of specific fragments extracted= 3 number of extra gaps= 0 total=679 Number of alignments=209 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 2 :MSETFDVELTKNVQGLGITIAGY 1r6jA 194 :MDPRTITMHKDSTGHVGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 0 total=682 Number of alignments=210 # 1r6jA read from 1r6jA/merged-local-a2m # found chain 1r6jA in training set T0359 3 :SETFDVELT 1r6jA 194 :MDPRTITMH T0359 12 :KNVQGLGITIAGY 1r6jA 204 :DSTGHVGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1r6jA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1r6jA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 0 total=686 Number of alignments=211 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1zokA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1zokA expands to /projects/compbio/data/pdb/1zok.pdb.gz 1zokA:# T0359 read from 1zokA/merged-local-a2m # 1zokA read from 1zokA/merged-local-a2m # adding 1zokA to template set # found chain 1zokA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1zokA)E221 T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 1zokA 222 :YEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1zokA 249 :DDSSIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRR Number of specific fragments extracted= 2 number of extra gaps= 0 total=688 Number of alignments=212 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 1zokA 222 :YEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1zokA 249 :DDSSIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRRK Number of specific fragments extracted= 2 number of extra gaps= 0 total=690 Number of alignments=213 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1zokA)E221 Warning: unaligning (T0359)T95 because last residue in template chain is (1zokA)F313 T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 1zokA 222 :YEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1zokA 249 :DDSSIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRRKA Number of specific fragments extracted= 2 number of extra gaps= 0 total=692 Number of alignments=214 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 1zokA 222 :YEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1zokA 249 :DDSSIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRRK Number of specific fragments extracted= 2 number of extra gaps= 0 total=694 Number of alignments=215 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1zokA)E221 T0359 5 :TFDVELTKNVQGLGITIAGYIGDKK 1zokA 222 :YEEITLERGNSGLGFSIAGGTDNPH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1zokA 248 :GDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRRK Number of specific fragments extracted= 2 number of extra gaps= 0 total=696 Number of alignments=216 # 1zokA read from 1zokA/merged-local-a2m # found chain 1zokA in template set T0359 6 :FDVELTKNVQGLGITIAGYIGDKK 1zokA 223 :EEITLERGNSGLGFSIAGGTDNPH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1zokA 248 :GDDSSIFITKIITGGAAAQDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRRK Number of specific fragments extracted= 2 number of extra gaps= 0 total=698 Number of alignments=217 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1rgrA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1rgrA expands to /projects/compbio/data/pdb/1rgr.pdb.gz 1rgrA:# T0359 read from 1rgrA/merged-local-a2m # 1rgrA read from 1rgrA/merged-local-a2m # adding 1rgrA to template set # found chain 1rgrA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1rgrA)E62 Warning: unaligning (T0359)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0359)A22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)H87 Warning: unaligning (T0359)K29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)H87 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0359)F69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0359 5 :TFDVELTKNVQGLGIT 1rgrA 63 :YEEITLERGNSGLGFS T0359 24 :YIGD 1rgrA 82 :GTDN T0359 30 :L 1rgrA 88 :I T0359 31 :EPSGIFVKSITKSSAVEHDGR 1rgrA 90 :DDPSIFITKIIPGGAAAQDGR T0359 54 :IGDQIIAVDGTNLQG 1rgrA 113 :VNDSILFVNEVDVRE T0359 71 :NQQAVEVLRHTGQTVLLTLMRRGE 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 6 number of extra gaps= 4 total=704 Number of alignments=218 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0359)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0359)A22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)H87 Warning: unaligning (T0359)K29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)H87 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0359)F69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0359 5 :TFDVELTKNVQGLGIT 1rgrA 63 :YEEITLERGNSGLGFS T0359 24 :YIGD 1rgrA 82 :GTDN T0359 30 :L 1rgrA 88 :I T0359 31 :EPSGIFVKSITKSSAVEHDGR 1rgrA 90 :DDPSIFITKIIPGGAAAQDGR T0359 54 :IGDQIIAVDGTNLQG 1rgrA 113 :VNDSILFVNEVDVRE T0359 71 :NQQAVEVLRHTGQTVLLTLMRRGE 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 6 number of extra gaps= 4 total=710 Number of alignments=219 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1rgrA)E62 Warning: unaligning (T0359)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0359)A22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)H87 Warning: unaligning (T0359)K29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)H87 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0359)F69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 Warning: unaligning (T0359)T95 because last residue in template chain is (1rgrA)P154 T0359 5 :TFDVELTKNVQGLGIT 1rgrA 63 :YEEITLERGNSGLGFS T0359 24 :YIGD 1rgrA 82 :GTDN T0359 30 :L 1rgrA 88 :I T0359 31 :EPSGIFVKSITKSSAVEHDGR 1rgrA 90 :DDPSIFITKIIPGGAAAQDGR T0359 54 :IGDQIIAVDGTNLQG 1rgrA 113 :VNDSILFVNEVDVRE T0359 71 :NQQAVEVLRHTGQTVLLTLMRRGE 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 6 number of extra gaps= 4 total=716 Number of alignments=220 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0359)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0359)A22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)H87 Warning: unaligning (T0359)K29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)H87 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0359)F69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0359 5 :TFDVELTKNVQGLGIT 1rgrA 63 :YEEITLERGNSGLGFS T0359 24 :YIGD 1rgrA 82 :GTDN T0359 30 :L 1rgrA 88 :I T0359 31 :EPSGIFVKSITKSSAVEHDGR 1rgrA 90 :DDPSIFITKIIPGGAAAQDGR T0359 54 :IGDQIIAVDGTNLQG 1rgrA 113 :VNDSILFVNEVDVRE T0359 71 :NQQAVEVLRHTGQTVLLTLMRRGE 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 6 number of extra gaps= 4 total=722 Number of alignments=221 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1rgrA)E62 Warning: unaligning (T0359)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0359)A22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)H87 Warning: unaligning (T0359)K29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)H87 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0359)F69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0359 5 :TFDVELTKNVQGLGIT 1rgrA 63 :YEEITLERGNSGLGFS T0359 24 :YIGD 1rgrA 82 :GTDN T0359 30 :LEPSGIFVKSITKSSAVEHDGR 1rgrA 89 :GDDPSIFITKIIPGGAAAQDGR T0359 54 :IGDQIIAVDGTNLQG 1rgrA 113 :VNDSILFVNEVDVRE T0359 71 :NQQAVEVLRHTGQTVLLTLMRRGE 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 5 number of extra gaps= 4 total=727 # 1rgrA read from 1rgrA/merged-local-a2m # found chain 1rgrA in template set Warning: unaligning (T0359)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)A80 Warning: unaligning (T0359)A22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)A80 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)G81 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)H87 Warning: unaligning (T0359)K29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)H87 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)R112 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)R112 Warning: unaligning (T0359)F69 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1rgrA)T129 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1rgrA)T129 T0359 6 :FDVELTKNVQGLGIT 1rgrA 64 :EEITLERGNSGLGFS T0359 24 :YIGD 1rgrA 82 :GTDN T0359 30 :LEPSGIFVKSITKSSAVEHDGR 1rgrA 89 :GDDPSIFITKIIPGGAAAQDGR T0359 54 :IGDQIIAVDGTNLQG 1rgrA 113 :VNDSILFVNEVDVRE T0359 71 :NQQAVEVLRHTGQTVLLTLMRRGE 1rgrA 130 :HSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 5 number of extra gaps= 4 total=732 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fe5A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 2fe5A/merged-local-a2m # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKLEPS 2fe5A 223 :TIMEVNLLKGPKGLGFSIAGGIGNQHIPGD T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=734 Number of alignments=222 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKLEPS 2fe5A 223 :TIMEVNLLKGPKGLGFSIAGGIGNQHIPGD T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 254 :SIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=736 Number of alignments=223 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 223 :TIMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=738 Number of alignments=224 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 223 :TIMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=740 Number of alignments=225 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 5 :TFDVELTKNVQGLGITIAGYIG 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIG T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2fe5A 247 :QHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=742 Number of alignments=226 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 6 :FDVELTKNVQGLGITIAGYIG 2fe5A 225 :MEVNLLKGPKGLGFSIAGGIG T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2fe5A 247 :QHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=744 Number of alignments=227 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0359)E94 because last residue in template chain is (2fe5A)S314 T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=746 Number of alignments=228 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=748 Number of alignments=229 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fe5A)S221 Warning: unaligning (T0359)E94 because last residue in template chain is (2fe5A)S314 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=750 Number of alignments=230 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0359)E94 because last residue in template chain is (2fe5A)S314 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=752 Number of alignments=231 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=754 Number of alignments=232 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=756 Number of alignments=233 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fe5A)S221 Warning: unaligning (T0359)E94 because last residue in template chain is (2fe5A)S314 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=758 Number of alignments=234 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fe5A)S221 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKKL 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 251 :GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=760 Number of alignments=235 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKK 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIGNQH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 2fe5A 250 :PGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKV Number of specific fragments extracted= 2 number of extra gaps= 0 total=762 Number of alignments=236 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKK 2fe5A 224 :IMEVNLLKGPKGLGFSIAGGIGNQH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 2fe5A 250 :PGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAK Number of specific fragments extracted= 2 number of extra gaps= 0 total=764 Number of alignments=237 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fe5A)S221 Warning: unaligning (T0359)E94 because last residue in template chain is (2fe5A)S314 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKK 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIGNQH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 250 :PGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=766 Number of alignments=238 # 2fe5A read from 2fe5A/merged-local-a2m # found chain 2fe5A in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 2fe5A 222 :MTIMEVNLLKGPKGLGFSIAGGIG T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fe5A 247 :QHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPG Number of specific fragments extracted= 2 number of extra gaps= 0 total=768 Number of alignments=239 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1wf7A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1wf7A/merged-local-a2m # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 8 :VELTKN 1wf7A 9 :VSLVGP T0359 15 :QGLGITIAGYIGD 1wf7A 15 :APWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAA Number of specific fragments extracted= 4 number of extra gaps= 0 total=772 Number of alignments=240 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 7 :DVELTKN 1wf7A 8 :SVSLVGP T0359 15 :QGLGITIAGYIGD 1wf7A 15 :APWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA Number of specific fragments extracted= 4 number of extra gaps= 0 total=776 Number of alignments=241 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 4 :ETFDVELTKNV 1wf7A 5 :SSGSVSLVGPA T0359 16 :GLGITIAGYIGD 1wf7A 16 :PWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASA Number of specific fragments extracted= 4 number of extra gaps= 0 total=780 Number of alignments=242 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 4 :ETFDVELTKNV 1wf7A 5 :SSGSVSLVGPA T0359 16 :GLGITIAGYIG 1wf7A 16 :PWGFRLQGGKD T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASA Number of specific fragments extracted= 4 number of extra gaps= 0 total=784 Number of alignments=243 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 13 :NVQGLGITIAGYIGD 1wf7A 13 :GPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=787 Number of alignments=244 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 13 :NVQGLGITIAGYIGD 1wf7A 13 :GPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASA Number of specific fragments extracted= 3 number of extra gaps= 0 total=790 Number of alignments=245 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 13 :NVQGLGITIAGYIGD 1wf7A 13 :GPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=793 Number of alignments=246 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 13 :NVQGLGITIAGYIGD 1wf7A 13 :GPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 3 number of extra gaps= 0 total=796 Number of alignments=247 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 1 :SMSETFDVELT 1wf7A 2 :SSGSSGSVSLV T0359 13 :NVQGLGITIAGYIGD 1wf7A 13 :GPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASA Number of specific fragments extracted= 4 number of extra gaps= 0 total=800 Number of alignments=248 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 2 :MSETFDVELT 1wf7A 3 :SGSSGSVSLV T0359 13 :NVQGLGITIAGYIGD 1wf7A 13 :GPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASA T0359 97 :V 1wf7A 94 :E Number of specific fragments extracted= 5 number of extra gaps= 0 total=805 Number of alignments=249 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 13 :NVQGLGITIAGYIG 1wf7A 13 :GPAPWGFRLQGGKD T0359 31 :EPSGIFVKSITKSSAVEHDG 1wf7A 27 :FNMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=808 Number of alignments=250 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 13 :NVQGLGITIAGYIG 1wf7A 13 :GPAPWGFRLQGGKD T0359 31 :EPSGIFVKSITKSSAVEHDG 1wf7A 27 :FNMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS Number of specific fragments extracted= 3 number of extra gaps= 0 total=811 Number of alignments=251 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 1 :SMSETFDVELT 1wf7A 2 :SSGSSGSVSLV T0359 13 :NVQGLGITIAGYIG 1wf7A 13 :GPAPWGFRLQGGKD T0359 31 :EPSGIFVKSITKSSAVEHDG 1wf7A 27 :FNMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAA Number of specific fragments extracted= 4 number of extra gaps= 0 total=815 Number of alignments=252 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 2 :MSETFDVELT 1wf7A 3 :SGSSGSVSLV T0359 13 :NVQGLGITIAGYIGD 1wf7A 13 :GPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAA Number of specific fragments extracted= 4 number of extra gaps= 0 total=819 Number of alignments=253 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 13 :NVQGLGITIAGYIGD 1wf7A 13 :GPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQR Number of specific fragments extracted= 3 number of extra gaps= 0 total=822 Number of alignments=254 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 13 :NVQGLGITIAGYIGD 1wf7A 13 :GPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRA Number of specific fragments extracted= 3 number of extra gaps= 0 total=825 Number of alignments=255 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 1 :SMSETFDVELTKNVQGLGITIAGYIGD 1wf7A 1 :GSSGSSGSVSLVGPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAAK Number of specific fragments extracted= 3 number of extra gaps= 0 total=828 Number of alignments=256 # 1wf7A read from 1wf7A/merged-local-a2m # found chain 1wf7A in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1wf7A 3 :SGSSGSVSLVGPAPWGFRLQGGKDF T0359 32 :PSGIFVKSITKSSAVEHDG 1wf7A 28 :NMPLTISSLKDGGKASQAH T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1wf7A 47 :VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAAAK Number of specific fragments extracted= 3 number of extra gaps= 0 total=831 Number of alignments=257 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1i16/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1i16 expands to /projects/compbio/data/pdb/1i16.pdb.gz 1i16:Warning: there is no chain 1i16 will retry with 1i16A # T0359 read from 1i16/merged-local-a2m # 1i16 read from 1i16/merged-local-a2m # adding 1i16 to template set # found chain 1i16 in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKLEPS 1i16 29 :TVCTVTLEKMSAGLGFSLEGGKGSLHGDKP T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 1i16 59 :LTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPD T0359 84 :TVLLTLMRR 1i16 109 :PVTIVIRRK Number of specific fragments extracted= 3 number of extra gaps= 0 total=834 Number of alignments=258 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKK 1i16 29 :TVCTVTLEKMSAGLGFSLEGGKGSLH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQT 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG T0359 85 :VLLTLMRRGE 1i16 110 :VTIVIRRKSL Number of specific fragments extracted= 3 number of extra gaps= 0 total=837 Number of alignments=259 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKK 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGKGSLH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQT 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG T0359 85 :VLLTLMRRGE 1i16 110 :VTIVIRRKSL Number of specific fragments extracted= 3 number of extra gaps= 0 total=840 Number of alignments=260 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1i16 30 :VCTVTLEKMSAGLGFSLEGGKGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i16 53 :LHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0359 82 :GQTVLLTLMRR 1i16 107 :DGPVTIVIRRK Number of specific fragments extracted= 3 number of extra gaps= 0 total=843 Number of alignments=261 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDK 1i16 29 :TVCTVTLEKMSAGLGFSLEGGKGSL T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i16 54 :HGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0359 82 :GQTVLLTLMRR 1i16 107 :DGPVTIVIRRK Number of specific fragments extracted= 3 number of extra gaps= 0 total=846 Number of alignments=262 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 3 :SE 1i16 26 :AE T0359 5 :TFDVELTKNVQGLGITIAGYIGDK 1i16 30 :VCTVTLEKMSAGLGFSLEGGKGSL T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i16 54 :HGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0359 82 :GQTVLLTLMRRGETSV 1i16 107 :DGPVTIVIRRKSLQSK Number of specific fragments extracted= 4 number of extra gaps= 0 total=850 Number of alignments=263 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDK 1i16 30 :VCTVTLEKMSAGLGFSLEGGKGSL T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i16 54 :HGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0359 82 :GQTVLLTLMRRGE 1i16 107 :DGPVTIVIRRKSL T0359 96 :S 1i16 122 :K Number of specific fragments extracted= 4 number of extra gaps= 0 total=854 Number of alignments=264 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKK 1i16 30 :VCTVTLEKMSAGLGFSLEGGKGSLH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0359 82 :GQTVLLTLMRR 1i16 107 :DGPVTIVIRRK Number of specific fragments extracted= 3 number of extra gaps= 0 total=857 Number of alignments=265 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKK 1i16 30 :VCTVTLEKMSAGLGFSLEGGKGSLH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0359 82 :GQTVLLTLMRRG 1i16 107 :DGPVTIVIRRKS Number of specific fragments extracted= 3 number of extra gaps= 0 total=860 Number of alignments=266 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKK 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGKGSLH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0359 82 :GQTVLLTLMRRGETS 1i16 107 :DGPVTIVIRRKSLQS Number of specific fragments extracted= 3 number of extra gaps= 0 total=863 Number of alignments=267 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKK 1i16 29 :TVCTVTLEKMSAGLGFSLEGGKGSLH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i16 55 :GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL T0359 82 :GQTVLLTLMRRGETS 1i16 107 :DGPVTIVIRRKSLQS Number of specific fragments extracted= 3 number of extra gaps= 0 total=866 Number of alignments=268 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1i16 30 :VCTVTLEKMSAGLGFSLEGGKGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1i16 53 :LHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRK Number of specific fragments extracted= 2 number of extra gaps= 0 total=868 Number of alignments=269 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1i16 30 :VCTVTLEKMSAGLGFSLEGGKGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1i16 53 :LHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRK Number of specific fragments extracted= 2 number of extra gaps= 0 total=870 Number of alignments=270 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1i16 27 :EATVCTVTLEKMSAGLGFSLEGGKGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1i16 53 :LHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKSLQS Number of specific fragments extracted= 2 number of extra gaps= 0 total=872 Number of alignments=271 # 1i16 read from 1i16/merged-local-a2m # found chain 1i16 in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1i16 28 :ATVCTVTLEKMSAGLGFSLEGGKGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1i16 53 :LHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALP T0359 83 :QTVLLTLMRRGETSV 1i16 108 :GPVTIVIRRKSLQSK Number of specific fragments extracted= 3 number of extra gaps= 0 total=875 Number of alignments=272 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ihjA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1ihjA/merged-local-a2m # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 4 :ETFDVELTKNVQ 1ihjA 14 :LIHMVTLDKTGK T0359 16 :GLGITIAGY 1ihjA 27 :SFGICIVRG T0359 25 :IG 1ihjA 38 :KD T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=879 Number of alignments=273 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 4 :ETFDVELTKNVQ 1ihjA 14 :LIHMVTLDKTGK T0359 16 :GLGITIAGY 1ihjA 27 :SFGICIVRG T0359 25 :IG 1ihjA 38 :KD T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=883 Number of alignments=274 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)L30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)E31 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 5 :TFDVELTKNVQ 1ihjA 15 :IHMVTLDKTGK T0359 16 :GLGITIAGYIGDK 1ihjA 27 :SFGICIVRGEVKD T0359 32 :PS 1ihjA 43 :TK T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=887 Number of alignments=275 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)L30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)E31 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 5 :TFDVELTKNVQ 1ihjA 15 :IHMVTLDKTGK T0359 16 :GLGITIAGYIGDK 1ihjA 27 :SFGICIVRGEVKD T0359 32 :PS 1ihjA 43 :TK T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1ihjA 47 :GIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=891 Number of alignments=276 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 5 :TFDVELTK 1ihjA 15 :IHMVTLDK T0359 13 :NVQGLGITIAGYIGDK 1ihjA 24 :GKKSFGICIVRGEVKD T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEI Number of specific fragments extracted= 3 number of extra gaps= 1 total=894 Number of alignments=277 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 5 :TFDVELTK 1ihjA 15 :IHMVTLDK T0359 13 :NVQGLGITIAGYIGDK 1ihjA 24 :GKKSFGICIVRGEVKD T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEI Number of specific fragments extracted= 3 number of extra gaps= 1 total=897 Number of alignments=278 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)R92 because last residue in template chain is (1ihjA)F105 T0359 4 :ETFDVELTK 1ihjA 14 :LIHMVTLDK T0359 13 :NVQGLGITIAG 1ihjA 24 :GKKSFGICIVR T0359 30 :LE 1ihjA 36 :EV T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1ihjA 45 :TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 0 total=901 Number of alignments=279 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 5 :TFDVELTKNVQ 1ihjA 15 :IHMVTLDKTGK T0359 16 :GLGITIAGY 1ihjA 27 :SFGICIVRG T0359 25 :IG 1ihjA 38 :KD T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=905 Number of alignments=280 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 5 :TFDVELTKNVQ 1ihjA 15 :IHMVTLDKTGK T0359 16 :GLGITIAGY 1ihjA 27 :SFGICIVRG T0359 25 :IG 1ihjA 38 :KD T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 1 total=909 Number of alignments=281 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 Warning: unaligning (T0359)R92 because last residue in template chain is (1ihjA)F105 T0359 3 :SETFDVELTKNVQ 1ihjA 13 :ELIHMVTLDKTGK T0359 16 :GLGITIAGYI 1ihjA 27 :SFGICIVRGE T0359 26 :G 1ihjA 39 :D T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 1 total=913 Number of alignments=282 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 Warning: unaligning (T0359)R92 because last residue in template chain is (1ihjA)F105 T0359 4 :ETFDVELTKNV 1ihjA 14 :LIHMVTLDKTG T0359 15 :QGLGITIAGYI 1ihjA 26 :KSFGICIVRGE T0359 26 :G 1ihjA 39 :D T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 1 total=917 Number of alignments=283 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 5 :TFDVELTKNVQ 1ihjA 15 :IHMVTLDKTGK T0359 16 :GLGITIAGYI 1ihjA 27 :SFGICIVRGE T0359 26 :G 1ihjA 39 :D T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=921 Number of alignments=284 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 5 :TFDVELTKNV 1ihjA 15 :IHMVTLDKTG T0359 15 :QGLGITIAGYI 1ihjA 26 :KSFGICIVRGE T0359 26 :G 1ihjA 39 :D T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 1 total=925 Number of alignments=285 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 Warning: unaligning (T0359)R92 because last residue in template chain is (1ihjA)F105 T0359 3 :SETFDVELTKNV 1ihjA 13 :ELIHMVTLDKTG T0359 15 :QGLGITIAGYI 1ihjA 26 :KSFGICIVRGE T0359 26 :G 1ihjA 39 :D T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 1 total=929 Number of alignments=286 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 Warning: unaligning (T0359)R92 because last residue in template chain is (1ihjA)F105 T0359 3 :SETFDVELTKNV 1ihjA 13 :ELIHMVTLDKTG T0359 15 :QGLGITIAGYI 1ihjA 26 :KSFGICIVRGE T0359 26 :G 1ihjA 39 :D T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 4 number of extra gaps= 1 total=933 Number of alignments=287 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1ihjA 15 :IHMVTLDKTGKKSFGICIVRGEV T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 2 number of extra gaps= 1 total=935 Number of alignments=288 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1ihjA 15 :IHMVTLDKTGKKSFGICIVRGEV T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQ Number of specific fragments extracted= 2 number of extra gaps= 1 total=937 Number of alignments=289 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 Warning: unaligning (T0359)R92 because last residue in template chain is (1ihjA)F105 T0359 3 :SETFDVELTKNV 1ihjA 13 :ELIHMVTLDKTG T0359 15 :QGLGITIAGYIG 1ihjA 26 :KSFGICIVRGEV T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 3 number of extra gaps= 1 total=940 Number of alignments=290 # 1ihjA read from 1ihjA/merged-local-a2m # found chain 1ihjA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1ihjA)G12 Warning: unaligning (T0359)D27 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1ihjA)P41 Warning: unaligning (T0359)K28 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)P41 Warning: unaligning (T0359)K29 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1ihjA)N42 Warning: unaligning (T0359)R92 because last residue in template chain is (1ihjA)F105 T0359 3 :SETFDVELTKNV 1ihjA 13 :ELIHMVTLDKTG T0359 15 :QGLGITIAGYIG 1ihjA 26 :KSFGICIVRGEV T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1ihjA 43 :TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQT Number of specific fragments extracted= 3 number of extra gaps= 1 total=943 Number of alignments=291 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1q3oA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1q3oA/merged-local-a2m # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 2 :MSETFDVELT 1q3oA 586 :IIKEKTVLLQ T0359 12 :KNVQGLGITIAGYIGDKKLE 1q3oA 597 :KDSEGFGFVLRGAKAQTPIE T0359 32 :PSGIFVKSITKSSAVEHDG 1q3oA 625 :PALQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMV Number of specific fragments extracted= 4 number of extra gaps= 0 total=947 Number of alignments=292 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 4 :ETFDVELT 1q3oA 588 :KEKTVLLQ T0359 12 :KNVQGLGITIAGYIGDKKLE 1q3oA 597 :KDSEGFGFVLRGAKAQTPIE T0359 32 :PSGIFVKSITKSSAVEHDG 1q3oA 625 :PALQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMV Number of specific fragments extracted= 4 number of extra gaps= 0 total=951 Number of alignments=293 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0359)R92 because last residue in template chain is (1q3oA)H687 T0359 6 :FDVELTK 1q3oA 590 :KTVLLQK T0359 13 :NVQGLGITIAGYIGDKKLE 1q3oA 598 :DSEGFGFVLRGAKAQTPIE T0359 32 :PSGIFVKSITKSSAVEHDG 1q3oA 625 :PALQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV T0359 91 :R 1q3oA 686 :R Number of specific fragments extracted= 5 number of extra gaps= 0 total=956 Number of alignments=294 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 4 :ETFDVELTK 1q3oA 588 :KEKTVLLQK T0359 13 :NVQGLGITIAGYIGDKKLE 1q3oA 598 :DSEGFGFVLRGAKAQTPIE T0359 32 :PSGIFVKSITKSSAVEHDG 1q3oA 625 :PALQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV T0359 91 :R 1q3oA 686 :R Number of specific fragments extracted= 5 number of extra gaps= 0 total=961 Number of alignments=295 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 2 :MSETFDVELTKNVQ 1q3oA 586 :IIKEKTVLLQKKDS T0359 16 :GLGITIAGYIG 1q3oA 601 :GFGFVLRGAKA T0359 27 :DKKLEPSGIFVKSITKSSAVEHDG 1q3oA 620 :PTPAFPALQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=965 Number of alignments=296 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 4 :ETFDVELTKNVQ 1q3oA 588 :KEKTVLLQKKDS T0359 16 :GLGITIAGYIG 1q3oA 601 :GFGFVLRGAKA T0359 27 :DKKLEPSGIFVKSITKSSAVEHDG 1q3oA 620 :PTPAFPALQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=969 Number of alignments=297 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 4 :ETFDVELTKNVQ 1q3oA 588 :KEKTVLLQKKDS T0359 16 :GLGITIAGYIGDKKLEPS 1q3oA 601 :GFGFVLRGAKAQTPIEEF T0359 34 :GIFVKSITKSSAVEHDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=973 Number of alignments=298 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 5 :TFDVELTK 1q3oA 589 :EKTVLLQK T0359 13 :NVQGLGITIAGYIGDKKLEPS 1q3oA 598 :DSEGFGFVLRGAKAQTPIEEF T0359 34 :GIFVKSITKSSAVEHDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVM Number of specific fragments extracted= 4 number of extra gaps= 0 total=977 Number of alignments=299 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0359)T95 because last residue in template chain is (1q3oA)H687 T0359 6 :FDVELTKNVQ 1q3oA 590 :KTVLLQKKDS T0359 16 :GLGITIAGYIGDKKLEPS 1q3oA 601 :GFGFVLRGAKAQTPIEEF T0359 34 :GIFVKSITKSSAVEHDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 4 number of extra gaps= 0 total=981 Number of alignments=300 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0359)T95 because last residue in template chain is (1q3oA)H687 T0359 6 :FDVELTKNVQ 1q3oA 590 :KTVLLQKKDS T0359 16 :GLGITIAGYIGDKKLEPS 1q3oA 601 :GFGFVLRGAKAQTPIEEF T0359 34 :GIFVKSITKSSAVEHDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 4 number of extra gaps= 0 total=985 Number of alignments=301 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 6 :FDVELTK 1q3oA 590 :KTVLLQK T0359 13 :NVQGLGITIAGYIGDKKLEPS 1q3oA 598 :DSEGFGFVLRGAKAQTPIEEF T0359 34 :GIFVKSITKSSAVEHDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=989 Number of alignments=302 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 6 :FDVELTK 1q3oA 590 :KTVLLQK T0359 13 :NVQGLGITIAGYIGDKKLEPS 1q3oA 598 :DSEGFGFVLRGAKAQTPIEEF T0359 34 :GIFVKSITKSSAVEHDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=993 Number of alignments=303 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0359)T95 because last residue in template chain is (1q3oA)H687 T0359 6 :FDVELTKNV 1q3oA 590 :KTVLLQKKD T0359 15 :QGLGITIAGYIGDKKLEPS 1q3oA 600 :EGFGFVLRGAKAQTPIEEF T0359 34 :GIFVKSITKSSAVEHDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 4 number of extra gaps= 0 total=997 Number of alignments=304 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0359)T95 because last residue in template chain is (1q3oA)H687 T0359 6 :FDVELTKNVQG 1q3oA 590 :KTVLLQKKDSE T0359 17 :LGITIAGYIGDKKLEPS 1q3oA 602 :FGFVLRGAKAQTPIEEF T0359 34 :GIFVKSITKSSAVEHDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 4 number of extra gaps= 0 total=1001 Number of alignments=305 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1q3oA 587 :IKEKTVLLQKKDSEGFGFVLRGAKA T0359 27 :DKKLEPSGIFVKSITKSSAVEHDG 1q3oA 620 :PTPAFPALQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVM Number of specific fragments extracted= 3 number of extra gaps= 0 total=1004 Number of alignments=306 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1q3oA 589 :EKTVLLQKKDSEGFGFVLRGAKA T0359 27 :DKKLEPSGIFVKSITKSSAVEHDG 1q3oA 620 :PTPAFPALQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMV Number of specific fragments extracted= 3 number of extra gaps= 0 total=1007 Number of alignments=307 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0359)T95 because last residue in template chain is (1q3oA)H687 T0359 6 :FDVELTKNVQGLGITIAGYIG 1q3oA 591 :TVLLQKKDSEGFGFVLRGAKA T0359 27 :DKKLEPSGIFVKSITKSSAVEHDG 1q3oA 620 :PTPAFPALQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1010 Number of alignments=308 # 1q3oA read from 1q3oA/merged-local-a2m # found chain 1q3oA in training set Warning: unaligning (T0359)T95 because last residue in template chain is (1q3oA)H687 T0359 5 :TFDVELT 1q3oA 589 :EKTVLLQ T0359 12 :KNVQGLGITIAGYIGDKKLEPS 1q3oA 597 :KDSEGFGFVLRGAKAQTPIEEF T0359 34 :GIFVKSITKSSAVEHDG 1q3oA 627 :LQYLESVDEGGVAWRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1q3oA 644 :LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR Number of specific fragments extracted= 4 number of extra gaps= 0 total=1014 Number of alignments=309 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kefA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1kefA expands to /projects/compbio/data/pdb/1kef.pdb.gz 1kefA:# T0359 read from 1kefA/merged-local-a2m # 1kefA read from 1kefA/merged-local-a2m # adding 1kefA to template set # found chain 1kefA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kefA)E1 T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 1kefA 2 :YEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kefA 29 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1016 Number of alignments=310 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 1kefA 2 :YEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kefA 29 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1018 Number of alignments=311 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kefA)E1 Warning: unaligning (T0359)T95 because last residue in template chain is (1kefA)P93 T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 1kefA 2 :YEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kefA 29 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1020 Number of alignments=312 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 1kefA 2 :YEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kefA 29 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1022 Number of alignments=313 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kefA)E1 T0359 5 :TFDVELTKNVQGLGITIAGYIGDKK 1kefA 2 :YEEITLERGNSGLGFSIAGGTDNPH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kefA 28 :GDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1024 Number of alignments=314 # 1kefA read from 1kefA/merged-local-a2m # found chain 1kefA in template set T0359 6 :FDVELTKNVQGLGITIAGYIGDKK 1kefA 3 :EEITLERGNSGLGFSIAGGTDNPH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kefA 28 :GDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1026 Number of alignments=315 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1b8qA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1b8qA expands to /projects/compbio/data/pdb/1b8q.pdb.gz 1b8qA:# T0359 read from 1b8qA/merged-local-a2m # 1b8qA read from 1b8qA/merged-local-a2m # adding 1b8qA to template set # found chain 1b8qA in template set T0359 4 :ETFDVELTKNVQ 1b8qA 8 :NVISVRLFKRKV T0359 16 :GLGITIAGYIG 1b8qA 21 :GLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1b8qA 84 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1030 Number of alignments=316 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 4 :ETFDVELTKNVQ 1b8qA 8 :NVISVRLFKRKV T0359 16 :GLGITIAGYIG 1b8qA 21 :GLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGET 1b8qA 84 :ETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1034 Number of alignments=317 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 6 :FDVELTKN 1b8qA 10 :ISVRLFKR T0359 14 :VQGLGITIAGY 1b8qA 19 :VGGLGFLVKER T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1b8qA 30 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA T0359 83 :QTVLLTLMRRGET 1b8qA 85 :THVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1038 Number of alignments=318 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 2 :MSETFDVELTKNV 1b8qA 6 :EPNVISVRLFKRK T0359 15 :QGLGITIAG 1b8qA 20 :GGLGFLVKE T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1b8qA 29 :RVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1b8qA 84 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1042 Number of alignments=319 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 3 :SETFDVELTKNV 1b8qA 7 :PNVISVRLFKRK T0359 15 :QGLGITIAGY 1b8qA 20 :GGLGFLVKER T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1b8qA 30 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRG 1b8qA 84 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1046 Number of alignments=320 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 4 :ETFDVELTKNV 1b8qA 8 :NVISVRLFKRK T0359 15 :QGLGITIAG 1b8qA 20 :GGLGFLVKE T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1b8qA 29 :RVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1b8qA 84 :ETHVVLILRGPEG T0359 96 :S 1b8qA 102 :E Number of specific fragments extracted= 5 number of extra gaps= 0 total=1051 Number of alignments=321 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 4 :ETFDVELTKNV 1b8qA 8 :NVISVRLFKRK T0359 15 :QGLGITIAGYI 1b8qA 20 :GGLGFLVKERV T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1b8qA 31 :SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1b8qA 84 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1055 Number of alignments=322 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 3 :SETFDVELTKNV 1b8qA 7 :PNVISVRLFKRK T0359 15 :QGLGITIAGYIG 1b8qA 20 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGETS 1b8qA 83 :SETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1059 Number of alignments=323 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 3 :SETFDVELTKNV 1b8qA 7 :PNVISVRLFKRK T0359 15 :QGLGITIAGYIG 1b8qA 20 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRR 1b8qA 84 :ETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1063 Number of alignments=324 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 4 :ETFDVELTKNV 1b8qA 8 :NVISVRLFKRK T0359 15 :QGLGITIAGYIG 1b8qA 20 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGETS 1b8qA 84 :ETHVVLILRGPEGFT Number of specific fragments extracted= 4 number of extra gaps= 0 total=1067 Number of alignments=325 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 1 :SMSET 1b8qA 1 :GSHMI T0359 6 :FDVELTK 1b8qA 10 :ISVRLFK T0359 13 :NVQGLGITIAGYIG 1b8qA 18 :KVGGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1b8qA 32 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGETS 1b8qA 84 :ETHVVLILRGPEGFT Number of specific fragments extracted= 5 number of extra gaps= 0 total=1072 Number of alignments=326 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1b8qA 7 :PNVISVRLFKRKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1b8qA 33 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1074 Number of alignments=327 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1b8qA 10 :ISVRLFKRKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1b8qA 33 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1076 Number of alignments=328 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1b8qA 9 :VISVRLFKRKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1b8qA 33 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1078 Number of alignments=329 # 1b8qA read from 1b8qA/merged-local-a2m # found chain 1b8qA in template set T0359 2 :MSETFDVELTK 1b8qA 6 :EPNVISVRLFK T0359 13 :NVQGLGITIAGYIGD 1b8qA 18 :KVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1b8qA 33 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1081 Number of alignments=330 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1i92A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1i92A expands to /projects/compbio/data/pdb/1i92.pdb.gz 1i92A:Skipped atom 533, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 543, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 545, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 547, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 549, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 551, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 553, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 555, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 557, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 559, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 561, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 563, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 565, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 567, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 569, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 571, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 573, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 575, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 577, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 579, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 581, because occupancy 0.500 <= existing 0.500 in 1i92A Skipped atom 583, because occupancy 0.500 <= existing 0.500 in 1i92A # T0359 read from 1i92A/merged-local-a2m # 1i92A read from 1i92A/merged-local-a2m # adding 1i92A to template set # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 8 :VELTKNVQGLGITIAGYI 1i92A 15 :CCLEKGPNGYGFHLHGEK T0359 31 :EPSGIFVKSITKSSAVEHDG 1i92A 33 :GKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGE 1i92A 85 :AVRLLVVDPEQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=1085 Number of alignments=331 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 6 :FDVELTKNVQGLGITIAGYI 1i92A 13 :RLCCLEKGPNGYGFHLHGEK T0359 31 :EPSGIFVKSITKSSAVEHDG 1i92A 33 :GKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGE 1i92A 85 :AVRLLVVDPEQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=1089 Number of alignments=332 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 4 :ETFDVELTKNVQGLGITIAG 1i92A 11 :LPRLCCLEKGPNGYGFHLHG T0359 30 :LEPSGIFVKSITKSSAVEHD 1i92A 32 :KGKLGQYIRLVEPGSPAEKA T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 52 :GLLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRG 1i92A 85 :AVRLLVVDPE Number of specific fragments extracted= 4 number of extra gaps= 1 total=1093 Number of alignments=333 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 5 :TFDVELTKNVQGLGITIAG 1i92A 12 :PRLCCLEKGPNGYGFHLHG T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1i92A 31 :EKGKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGE 1i92A 85 :AVRLLVVDPEQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=1097 Number of alignments=334 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 5 :TFDVELTKNVQGLGITIAG 1i92A 12 :PRLCCLEKGPNGYGFHLHG T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1i92A 31 :EKGKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGE 1i92A 85 :AVRLLVVDPEQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=1101 Number of alignments=335 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1i92A)G9 Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 3 :SETFDVELTKNVQGLGITIAG 1i92A 10 :MLPRLCCLEKGPNGYGFHLHG T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1i92A 31 :EKGKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGE 1i92A 85 :AVRLLVVDPEQ T0359 95 :TSV 1i92A 97 :TRL Number of specific fragments extracted= 5 number of extra gaps= 1 total=1106 Number of alignments=336 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1i92A)G9 Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 3 :SETFDVELTKNVQGLGITIAG 1i92A 10 :MLPRLCCLEKGPNGYGFHLHG T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1i92A 31 :EKGKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGE 1i92A 85 :AVRLLVVDPEQ T0359 95 :TS 1i92A 97 :TR Number of specific fragments extracted= 5 number of extra gaps= 1 total=1111 Number of alignments=337 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 5 :TFDVELTKNVQGLGITIAGYIG 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGET 1i92A 85 :AVRLLVVDPEQD Number of specific fragments extracted= 4 number of extra gaps= 1 total=1115 Number of alignments=338 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 5 :TFDVELTKNVQGLGITIAGYIG 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGE 1i92A 85 :AVRLLVVDPEQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=1119 Number of alignments=339 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1i92A 10 :MLPRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGETS 1i92A 85 :AVRLLVVDPEQDT Number of specific fragments extracted= 4 number of extra gaps= 1 total=1123 Number of alignments=340 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1i92A)G9 Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1i92A 10 :MLPRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1i92A 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGETS 1i92A 85 :AVRLLVVDPEQDT Number of specific fragments extracted= 4 number of extra gaps= 1 total=1127 Number of alignments=341 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKGK T0359 33 :SGIFVKSITKSSAVEHDG 1i92A 35 :LGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGE 1i92A 85 :AVRLLVVDPEQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=1131 Number of alignments=342 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1i92A 12 :PRLCCLEKGPNGYGFHLHGEKGK T0359 33 :SGIFVKSITKSSAVEHDG 1i92A 35 :LGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGE 1i92A 85 :AVRLLVVDPEQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=1135 Number of alignments=343 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)M2 because first residue in template chain is (1i92A)G9 Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1i92A 10 :MLPRLCCLEKGPNGYGFHLHGEKGK T0359 33 :SGIFVKSITKSSAVEHDG 1i92A 35 :LGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGETSV 1i92A 85 :AVRLLVVDPEQDTR Number of specific fragments extracted= 4 number of extra gaps= 1 total=1139 Number of alignments=344 # 1i92A read from 1i92A/merged-local-a2m # found chain 1i92A in template set Warning: unaligning (T0359)G82 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1i92A)N84 Warning: unaligning (T0359)Q83 because of BadResidue code TOO_FEW_ATOMS+NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1i92A)N84 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1i92A 10 :MLPRLCCLEKGPNGYGFHLHGEKGK T0359 33 :SGIFVKSITKSSAVEHDG 1i92A 35 :LGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1i92A 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAA T0359 84 :TVLLTLMRRGETSV 1i92A 85 :AVRLLVVDPEQDTR Number of specific fragments extracted= 4 number of extra gaps= 1 total=1143 Number of alignments=345 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2h2bA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 2h2bA/merged-local-a2m # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIGDKKLE 2h2bA 33 :GFGIAISGGRDNPHFQ T0359 32 :PSGIFVKSITKSSAV 2h2bA 51 :ETSIVISDVLKGGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 66 :EGQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1147 Number of alignments=346 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 3 :SETFDVELTKNVQ 2h2bA 19 :WEQHTVTLHRAPG T0359 16 :GLGITIAGYIGDKKLE 2h2bA 33 :GFGIAISGGRDNPHFQ T0359 32 :PSGIFVKSITKSSAV 2h2bA 51 :ETSIVISDVLKGGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 66 :EGQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1151 Number of alignments=347 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIGDKKL 2h2bA 33 :GFGIAISGGRDNPHF T0359 31 :EPSGIFVKSITKSSAV 2h2bA 50 :GETSIVISDVLKGGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h2bA 66 :EGQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1155 Number of alignments=348 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 3 :SETFDVELTKNVQ 2h2bA 19 :WEQHTVTLHRAPG T0359 16 :GLGITIAGYIGDKKL 2h2bA 33 :GFGIAISGGRDNPHF T0359 31 :EPSGIFVKSITKSSAV 2h2bA 50 :GETSIVISDVLKGGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h2bA 66 :EGQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1159 Number of alignments=349 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDK 2h2bA 21 :QHTVTLHRAPGFGFGIAISGGRDNP T0359 29 :KLEPSGIFVKSITKSSAV 2h2bA 48 :QSGETSIVISDVLKGGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 66 :EGQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG Number of specific fragments extracted= 3 number of extra gaps= 0 total=1162 Number of alignments=350 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDK 2h2bA 21 :QHTVTLHRAPGFGFGIAISGGRDNP T0359 29 :KLEPSGIFVKSITKSSAV 2h2bA 48 :QSGETSIVISDVLKGGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 66 :EGQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG Number of specific fragments extracted= 3 number of extra gaps= 0 total=1165 Number of alignments=351 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIGDKKL 2h2bA 33 :GFGIAISGGRDNPHF T0359 31 :EPSGIFVKSITKSSAVE 2h2bA 50 :GETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1169 Number of alignments=352 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 3 :SETFDVELTKNVQ 2h2bA 19 :WEQHTVTLHRAPG T0359 16 :GLGITIAGYIGDKKL 2h2bA 33 :GFGIAISGGRDNPHF T0359 31 :EPSGIFVKSITKSSAVE 2h2bA 50 :GETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1173 Number of alignments=353 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIG 2h2bA 33 :GFGIAISGGRD T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h2bA 46 :HFQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGGW Number of specific fragments extracted= 4 number of extra gaps= 0 total=1177 Number of alignments=354 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIG 2h2bA 33 :GFGIAISGGRD T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h2bA 46 :HFQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG T0359 96 :SV 2h2bA 116 :RT Number of specific fragments extracted= 5 number of extra gaps= 0 total=1182 Number of alignments=355 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIGDKKL 2h2bA 33 :GFGIAISGGRDNPHF T0359 31 :EPSGIFVKSITKSSAVE 2h2bA 50 :GETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1186 Number of alignments=356 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 4 :ETFDVELTKNVQ 2h2bA 20 :EQHTVTLHRAPG T0359 16 :GLGITIAGYIGDKKL 2h2bA 33 :GFGIAISGGRDNPHF T0359 31 :EPSGIFVKSITKSSAVE 2h2bA 50 :GETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKK Number of specific fragments extracted= 4 number of extra gaps= 0 total=1190 Number of alignments=357 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIGDKKL 2h2bA 33 :GFGIAISGGRDNPHF T0359 31 :EPSGIFVKSITKSSAVE 2h2bA 50 :GETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGGW Number of specific fragments extracted= 4 number of extra gaps= 0 total=1194 Number of alignments=358 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQ 2h2bA 18 :IWEQHTVTLHRAPG T0359 16 :GLGITIAGYIGD 2h2bA 33 :GFGIAISGGRDN T0359 28 :KKLEPSGIFVKSITKSSAVE 2h2bA 47 :FQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1198 Number of alignments=359 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 2h2bA 19 :WEQHTVTLHRAPGFGFGIAISGGRD T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h2bA 46 :HFQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG Number of specific fragments extracted= 3 number of extra gaps= 0 total=1201 Number of alignments=360 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 2h2bA 21 :QHTVTLHRAPGFGFGIAISGGRD T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h2bA 46 :HFQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG Number of specific fragments extracted= 3 number of extra gaps= 0 total=1204 Number of alignments=361 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 1 :SMSETFDVELTK 2h2bA 17 :MIWEQHTVTLHR T0359 13 :NVQGLGITIAGYIG 2h2bA 30 :PGFGFGIAISGGRD T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h2bA 46 :HFQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGGW Number of specific fragments extracted= 4 number of extra gaps= 0 total=1208 Number of alignments=362 # 2h2bA read from 2h2bA/merged-local-a2m # found chain 2h2bA in template set T0359 2 :MSETFDVELTK 2h2bA 18 :IWEQHTVTLHR T0359 13 :NVQGLGITIAGYIG 2h2bA 30 :PGFGFGIAISGGRD T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h2bA 46 :HFQSGETSIVISDVLKGGPAE T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2h2bA 67 :GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGGW Number of specific fragments extracted= 4 number of extra gaps= 0 total=1212 Number of alignments=363 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fneA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 2fneA/merged-local-a2m # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYI 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGY T0359 27 :DKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2fneA 1978 :GSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1214 Number of alignments=364 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0359 28 :KKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fneA 1979 :SPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD Number of specific fragments extracted= 2 number of extra gaps= 0 total=1216 Number of alignments=365 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIG 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0359 28 :KKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2fneA 1979 :SPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1218 Number of alignments=366 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYG T0359 28 :KKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fneA 1979 :SPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD Number of specific fragments extracted= 2 number of extra gaps= 0 total=1220 Number of alignments=367 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0359 8 :VELTKNVQGLGITIAGYIG 2fneA 1960 :ITLERGPDGLGFSIVGGYG T0359 28 :KKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2fneA 1979 :SPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1222 Number of alignments=368 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0359 6 :FDVELTKNVQGLGITIAGYIG 2fneA 1958 :KSITLERGPDGLGFSIVGGYG T0359 28 :KKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fneA 1979 :SPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD Number of specific fragments extracted= 2 number of extra gaps= 0 total=1224 Number of alignments=369 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2fneA 1980 :PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1226 Number of alignments=370 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fneA 1980 :PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD Number of specific fragments extracted= 2 number of extra gaps= 0 total=1228 Number of alignments=371 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fneA 1980 :PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETSV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1230 Number of alignments=372 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2fneA 1980 :PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1232 Number of alignments=373 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGSPH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 2fneA 1982 :GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1234 Number of alignments=374 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGSPH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fneA 1982 :GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD Number of specific fragments extracted= 2 number of extra gaps= 0 total=1236 Number of alignments=375 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGSPH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fneA 1982 :GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETSV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1238 Number of alignments=376 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGDKK 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGSPH T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2fneA 1982 :GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1240 Number of alignments=377 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0359 8 :VELTKNVQGLGITIAGYIGD 2fneA 1960 :ITLERGPDGLGFSIVGGYGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 2fneA 1980 :PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1242 Number of alignments=378 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGD 2fneA 1957 :CKSITLERGPDGLGFSIVGGYGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2fneA 1980 :PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1244 Number of alignments=379 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fneA 1980 :PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETSV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1246 Number of alignments=380 # 2fneA read from 2fneA/merged-local-a2m # found chain 2fneA in template set Warning: unaligning (T0359)M2 because first residue in template chain is (2fneA)M1954 T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 2fneA 1955 :PQCKSITLERGPDGLGFSIVGGYGS T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2fneA 1980 :PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSDETS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1248 Number of alignments=381 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n99A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1n99A/merged-local-a2m # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELTKNV 1n99A 113 :REVILCKDQ T0359 15 :QGLGITIAGYIG 1n99A 123 :GKIGLRLKSIDN T0359 34 :GIFVKSITKSSAVEHDG 1n99A 135 :GIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0359 82 :GQTVLL 1n99A 183 :GEKITM T0359 90 :MRRGET 1n99A 191 :RDRPFE Number of specific fragments extracted= 6 number of extra gaps= 1 total=1254 Number of alignments=382 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 8 :VELTKNV 1n99A 115 :VILCKDQ T0359 15 :QGLGITIAGYIG 1n99A 123 :GKIGLRLKSIDN T0359 34 :GIFVKSITKSSAVEHDG 1n99A 135 :GIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0359 82 :GQTVLL 1n99A 183 :GEKITM T0359 90 :MRRGET 1n99A 191 :RDRPFE Number of specific fragments extracted= 6 number of extra gaps= 1 total=1260 Number of alignments=383 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELTKNVQG 1n99A 113 :REVILCKDQDG T0359 17 :LGITIAGY 1n99A 125 :IGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0359 82 :GQTVLL 1n99A 183 :GEKITM T0359 90 :MRRG 1n99A 191 :RDRP Number of specific fragments extracted= 6 number of extra gaps= 1 total=1266 Number of alignments=384 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELTKNVQG 1n99A 113 :REVILCKDQDG T0359 17 :LGITIAGY 1n99A 125 :IGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0359 82 :GQTVLL 1n99A 183 :GEKITM T0359 90 :MRRG 1n99A 191 :RDRP Number of specific fragments extracted= 6 number of extra gaps= 1 total=1272 Number of alignments=385 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELTKNVQG 1n99A 113 :REVILCKDQDG T0359 17 :LGITIAGY 1n99A 125 :IGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0359 82 :GQTVLL 1n99A 183 :GEKITM T0359 90 :MRRG 1n99A 191 :RDRP Number of specific fragments extracted= 6 number of extra gaps= 1 total=1278 Number of alignments=386 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELTKNVQG 1n99A 113 :REVILCKDQDG T0359 17 :LGITIAGY 1n99A 125 :IGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0359 82 :GQTVLL 1n99A 183 :GEKITM T0359 90 :MRR 1n99A 191 :RDR Number of specific fragments extracted= 6 number of extra gaps= 1 total=1284 Number of alignments=387 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELTKNVQG 1n99A 113 :REVILCKDQDG T0359 17 :LGITIAGY 1n99A 125 :IGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0359 82 :GQTVLL 1n99A 183 :GEKITM T0359 90 :MRRGE 1n99A 191 :RDRPF Number of specific fragments extracted= 6 number of extra gaps= 1 total=1290 Number of alignments=388 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELTKNVQG 1n99A 113 :REVILCKDQDG T0359 17 :LGITIAGY 1n99A 125 :IGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0359 82 :GQTVLL 1n99A 183 :GEKITM T0359 90 :MRRGE 1n99A 191 :RDRPF Number of specific fragments extracted= 6 number of extra gaps= 1 total=1296 Number of alignments=389 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELTKNVQG 1n99A 113 :REVILCKDQDG T0359 17 :LGITIAGY 1n99A 125 :IGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0359 82 :GQTVLL 1n99A 183 :GEKITM T0359 90 :MRRGE 1n99A 191 :RDRPF Number of specific fragments extracted= 6 number of extra gaps= 1 total=1302 Number of alignments=390 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELTKNVQG 1n99A 113 :REVILCKDQDG T0359 17 :LGITIAGY 1n99A 125 :IGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQA T0359 82 :GQTVLL 1n99A 183 :GEKITM T0359 90 :MRRGE 1n99A 191 :RDRPF Number of specific fragments extracted= 6 number of extra gaps= 1 total=1308 Number of alignments=391 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 5 :TFDVELTKNVQGLGITIAGY 1n99A 113 :REVILCKDQDGKIGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM T0359 91 :RRGE 1n99A 191 :RDRP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1312 Number of alignments=392 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 5 :TFDVELTKNVQGLGITIAGY 1n99A 113 :REVILCKDQDGKIGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM T0359 91 :RRGE 1n99A 191 :RDRP Number of specific fragments extracted= 4 number of extra gaps= 1 total=1316 Number of alignments=393 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 5 :TFDVELTKNVQGLGITIAGYIG 1n99A 113 :REVILCKDQDGKIGLRLKSIDN T0359 34 :GIFVKSITKSSAVEHDG 1n99A 135 :GIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQT 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGE T0359 85 :VLL 1n99A 186 :ITM T0359 90 :MRRG 1n99A 191 :RDRP Number of specific fragments extracted= 5 number of extra gaps= 1 total=1321 Number of alignments=394 # 1n99A read from 1n99A/merged-local-a2m # found chain 1n99A in template set Warning: unaligning (T0359)T5 because first residue in template chain is (1n99A)P112 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE in next template residue (1n99A)I190 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE at template residue (1n99A)I190 T0359 6 :FDVELT 1n99A 113 :REVILC T0359 12 :KNVQGLGITIAGY 1n99A 120 :DQDGKIGLRLKSI T0359 32 :PSGIFVKSITKSSAVEHDG 1n99A 133 :DNGIFVQLVQANSPASLVG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 1n99A 152 :LRFGDQVLQINGENCAGWSSDKAHKVLKQAFG T0359 84 :TVLL 1n99A 185 :KITM T0359 90 :MRRGE 1n99A 191 :RDRPF Number of specific fragments extracted= 6 number of extra gaps= 1 total=1327 Number of alignments=395 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2bygA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 2bygA expands to /projects/compbio/data/pdb/2byg.pdb.gz 2bygA:# T0359 read from 2bygA/merged-local-a2m # 2bygA read from 2bygA/merged-local-a2m # adding 2bygA to template set # found chain 2bygA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 2bygA 191 :VVEIKLFKGPKGLGFSIAGGVGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2bygA 218 :GDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1329 Number of alignments=396 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKL 2bygA 190 :TVVEIKLFKGPKGLGFSIAGGVGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2bygA 218 :GDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1331 Number of alignments=397 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set Warning: unaligning (T0359)S96 because last residue in template chain is (2bygA)Y283 T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 2bygA 191 :VVEIKLFKGPKGLGFSIAGGVGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 2bygA 218 :GDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKPTTI Number of specific fragments extracted= 2 number of extra gaps= 0 total=1333 Number of alignments=398 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 2bygA 191 :VVEIKLFKGPKGLGFSIAGGVGNQHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2bygA 218 :GDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKPT Number of specific fragments extracted= 2 number of extra gaps= 0 total=1335 Number of alignments=399 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKK 2bygA 191 :VVEIKLFKGPKGLGFSIAGGVGNQH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 2bygA 217 :PGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKV Number of specific fragments extracted= 2 number of extra gaps= 0 total=1337 Number of alignments=400 # 2bygA read from 2bygA/merged-local-a2m # found chain 2bygA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKK 2bygA 191 :VVEIKLFKGPKGLGFSIAGGVGNQH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 2bygA 217 :PGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1339 Number of alignments=401 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1v5lA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1v5lA expands to /projects/compbio/data/pdb/1v5l.pdb.gz 1v5lA:# T0359 read from 1v5lA/merged-local-a2m # 1v5lA read from 1v5lA/merged-local-a2m # adding 1v5lA to template set # found chain 1v5lA in template set T0359 8 :VEL 1v5lA 9 :VVL T0359 12 :KNVQGLGITIAGYIGD 1v5lA 12 :PGPAPWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETRL Number of specific fragments extracted= 4 number of extra gaps= 0 total=1343 Number of alignments=402 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 7 :DVEL 1v5lA 8 :NVVL T0359 12 :KNVQGLGITIAGYIGD 1v5lA 12 :PGPAPWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR Number of specific fragments extracted= 4 number of extra gaps= 0 total=1347 Number of alignments=403 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 9 :ELTKNVQGLGITIAGYIG 1v5lA 9 :VVLPGPAPWGFRLSGGID T0359 31 :EPSGIFVKSITKSSAVEHDG 1v5lA 27 :FNQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1350 Number of alignments=404 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 10 :LTKNVQGLGITIAGYIG 1v5lA 10 :VLPGPAPWGFRLSGGID T0359 31 :EPSGIFVKSITKSSAVEHDG 1v5lA 27 :FNQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1353 Number of alignments=405 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 9 :ELTKNVQGLGITIAGYIGD 1v5lA 9 :VVLPGPAPWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1356 Number of alignments=406 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 10 :LTKNVQGLGITIAGYIGD 1v5lA 10 :VLPGPAPWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET Number of specific fragments extracted= 3 number of extra gaps= 0 total=1359 Number of alignments=407 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 2 :MSETFDVELT 1v5lA 3 :SGSSGNVVLP T0359 13 :NVQGLGITIAGYIGD 1v5lA 13 :GPAPWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET T0359 95 :T 1v5lA 94 :P Number of specific fragments extracted= 5 number of extra gaps= 0 total=1364 Number of alignments=408 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 2 :MSETFDVELTKN 1v5lA 3 :SGSSGNVVLPGP T0359 15 :QGLGITIAGYIGD 1v5lA 15 :APWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET T0359 95 :TS 1v5lA 94 :PQ Number of specific fragments extracted= 5 number of extra gaps= 0 total=1369 Number of alignments=409 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 9 :ELTKNVQGLGITIAGYIG 1v5lA 9 :VVLPGPAPWGFRLSGGID T0359 31 :EPSGIFVKSITKSSAVEHDG 1v5lA 27 :FNQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETRL Number of specific fragments extracted= 3 number of extra gaps= 0 total=1372 Number of alignments=410 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 10 :LTKNVQGLGITIAGYIG 1v5lA 10 :VLPGPAPWGFRLSGGID T0359 31 :EPSGIFVKSITKSSAVEHDG 1v5lA 27 :FNQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET Number of specific fragments extracted= 3 number of extra gaps= 0 total=1375 Number of alignments=411 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 1 :SMSETFDVELT 1v5lA 2 :SSGSSGNVVLP T0359 13 :NVQGLGITIAGYIGD 1v5lA 13 :GPAPWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR Number of specific fragments extracted= 4 number of extra gaps= 0 total=1379 Number of alignments=412 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 4 :ETFDVELTKN 1v5lA 5 :SSGNVVLPGP T0359 15 :QGLGITIAGYIGD 1v5lA 15 :APWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET Number of specific fragments extracted= 4 number of extra gaps= 0 total=1383 Number of alignments=413 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 9 :ELTKNVQGLGITIAGYIGD 1v5lA 9 :VVLPGPAPWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKI Number of specific fragments extracted= 3 number of extra gaps= 0 total=1386 Number of alignments=414 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 10 :LTKNVQGLGITIAGYIGD 1v5lA 10 :VLPGPAPWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1389 Number of alignments=415 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 10 :LTKNVQGLGITIAGYIGD 1v5lA 10 :VLPGPAPWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1392 Number of alignments=416 # 1v5lA read from 1v5lA/merged-local-a2m # found chain 1v5lA in template set T0359 12 :KNVQGLGITIAGYIGD 1v5lA 12 :PGPAPWGFRLSGGIDF T0359 32 :PSGIFVKSITKSSAVEHDG 1v5lA 28 :NQPLVITRITPGSKAAAAN T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1v5lA 47 :LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET Number of specific fragments extracted= 3 number of extra gaps= 0 total=1395 Number of alignments=417 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f5yA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 2f5yA/merged-local-a2m # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)S3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAGYI 2f5yA 16 :YRQITIPRGKDGFGFTICCDS T0359 34 :GIFVKSITKSSAVEHDG 2f5yA 37 :PVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1399 Number of alignments=418 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0359 5 :TFDVELTKNVQGLGITIAGYI 2f5yA 16 :YRQITIPRGKDGFGFTICCDS T0359 34 :GIFVKSITKSSAVEHDG 2f5yA 37 :PVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 2 total=1403 Number of alignments=419 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAGY 2f5yA 16 :YRQITIPRGKDGFGFTICCD T0359 33 :SGIFVKSITKSSAVEHDG 2f5yA 36 :SPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 2 total=1407 Number of alignments=420 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0359 5 :TFDVELTKNVQGLGITIAGY 2f5yA 16 :YRQITIPRGKDGFGFTICCD T0359 33 :SGIFVKSITKSSAVEHDG 2f5yA 36 :SPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 2 total=1411 Number of alignments=421 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0359 23 :GYIGDKKLEPSGIFVKSITKSSAVEHDG 2f5yA 26 :DGFGFTICCDSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWR Number of specific fragments extracted= 3 number of extra gaps= 1 total=1414 Number of alignments=422 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0359 24 :YIGDKKLEPSGIFVKSITKSSAVEHDG 2f5yA 27 :GFGFTICCDSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWR Number of specific fragments extracted= 3 number of extra gaps= 1 total=1417 Number of alignments=423 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 2 total=1421 Number of alignments=424 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 2 total=1425 Number of alignments=425 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)S3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1429 Number of alignments=426 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)S3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1433 Number of alignments=427 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 2 total=1437 Number of alignments=428 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1441 Number of alignments=429 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)S3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1445 Number of alignments=430 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)S3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIA 2f5yA 16 :YRQITIPRGKDGFGFTIC T0359 31 :EPSGIFVKSITKSSAVEHDG 2f5yA 34 :CDSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1449 Number of alignments=431 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWR Number of specific fragments extracted= 4 number of extra gaps= 2 total=1453 Number of alignments=432 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1457 Number of alignments=433 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)S3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1461 Number of alignments=434 # 2f5yA read from 2f5yA/merged-local-a2m # found chain 2f5yA in template set Warning: unaligning (T0359)S3 because first residue in template chain is (2f5yA)M14 Warning: unaligning (T0359)E4 because of BadResidue code BAD_PEPTIDE at template residue (2f5yA)R15 Warning: unaligning (T0359)Q67 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f5yA)H70 Warning: unaligning (T0359)G68 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f5yA)H70 Warning: unaligning (T0359)G93 because last residue in template chain is (2f5yA)V95 T0359 5 :TFDVELTKNVQGLGITIAG 2f5yA 16 :YRQITIPRGKDGFGFTICC T0359 32 :PSGIFVKSITKSSAVEHDG 2f5yA 35 :DSPVRVQAVDSGGPAERAG T0359 52 :IQIGDQIIAVDGTNL 2f5yA 54 :LQQLDTVLQLNERPV T0359 69 :FTNQQAVEVLRHTGQTVLLTLMRR 2f5yA 71 :WKCVELAHEIRSCPSEIILLVWRM Number of specific fragments extracted= 4 number of extra gaps= 1 total=1465 Number of alignments=435 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1iu0A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1iu0A expands to /projects/compbio/data/pdb/1iu0.pdb.gz 1iu0A:# T0359 read from 1iu0A/merged-local-a2m # 1iu0A read from 1iu0A/merged-local-a2m # adding 1iu0A to template set # found chain 1iu0A in template set Warning: unaligning (T0359)R92 because last residue in template chain is (1iu0A)R91 T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKL 1iu0A 2 :EYEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1iu0A 30 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1467 Number of alignments=436 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKL 1iu0A 2 :EYEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1iu0A 30 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1469 Number of alignments=437 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set Warning: unaligning (T0359)R92 because last residue in template chain is (1iu0A)R91 T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKKL 1iu0A 2 :EYEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1iu0A 30 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1471 Number of alignments=438 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKKL 1iu0A 3 :YEEITLERGNSGLGFSIAGGTDNPHI T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1iu0A 30 :DDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1473 Number of alignments=439 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set Warning: unaligning (T0359)R92 because last residue in template chain is (1iu0A)R91 T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKK 1iu0A 2 :EYEEITLERGNSGLGFSIAGGTDNPH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1iu0A 29 :GDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1475 Number of alignments=440 # 1iu0A read from 1iu0A/merged-local-a2m # found chain 1iu0A in template set Warning: unaligning (T0359)R92 because last residue in template chain is (1iu0A)R91 T0359 6 :FDVELTKNVQGLGITIAGYIGDKK 1iu0A 4 :EEITLERGNSGLGFSIAGGTDNPH T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1iu0A 29 :GDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMR Number of specific fragments extracted= 2 number of extra gaps= 0 total=1477 Number of alignments=441 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1l6oA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1l6oA expands to /projects/compbio/data/pdb/1l6o.pdb.gz 1l6oA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0359 read from 1l6oA/merged-local-a2m # 1l6oA read from 1l6oA/merged-local-a2m # adding 1l6oA to template set # found chain 1l6oA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)K12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 T0359 5 :TFD 1l6oA 252 :IIT T0359 10 :LT 1l6oA 257 :LN T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 27 :DK 1l6oA 275 :ER T0359 31 :E 1l6oA 277 :G T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 11 total=1491 Number of alignments=442 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)K12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0359)R92 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0359)G93 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 T0359 6 :FD 1l6oA 253 :IT T0359 10 :LT 1l6oA 257 :LN T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 27 :DK 1l6oA 275 :ER T0359 31 :E 1l6oA 277 :G T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 12 total=1505 Number of alignments=443 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 T0359 6 :FD 1l6oA 253 :IT T0359 10 :LTK 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 27 :DK 1l6oA 275 :ER T0359 31 :E 1l6oA 277 :G T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 12 total=1519 Number of alignments=444 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 T0359 6 :FD 1l6oA 253 :IT T0359 10 :LTK 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 27 :DK 1l6oA 275 :ER T0359 31 :E 1l6oA 277 :G T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 12 total=1533 Number of alignments=445 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0359)R92 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0359)G93 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0359)E94 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 T0359 5 :TFD 1l6oA 252 :IIT T0359 10 :LTK 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 29 :KLE 1l6oA 275 :ERG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 13 total=1546 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0359)R92 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 T0359 6 :FD 1l6oA 253 :IT T0359 10 :LTK 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 29 :KLE 1l6oA 275 :ERG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 13 total=1559 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0359)R92 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0359)G93 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0359)E94 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0359)T95 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 Warning: unaligning (T0359)S96 because last residue in template chain is (1l6oA)H345 T0359 5 :TFD 1l6oA 252 :IIT T0359 10 :LTK 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 29 :KLE 1l6oA 275 :ERG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 13 total=1572 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0359)R92 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0359)G93 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0359)E94 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0359)T95 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 Warning: unaligning (T0359)S96 because last residue in template chain is (1l6oA)H345 T0359 5 :TFD 1l6oA 252 :IIT T0359 10 :LTK 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 29 :KLE 1l6oA 275 :ERG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 13 total=1585 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 T0359 5 :TFD 1l6oA 252 :IIT T0359 10 :LTK 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 29 :KLE 1l6oA 275 :ERG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1598 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0359)R92 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 T0359 6 :FD 1l6oA 253 :IT T0359 10 :LTK 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 29 :KLE 1l6oA 275 :ERG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 13 total=1611 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0359)R92 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0359)G93 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0359)E94 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0359)T95 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 Warning: unaligning (T0359)S96 because last residue in template chain is (1l6oA)H345 T0359 5 :TFD 1l6oA 252 :IIT T0359 10 :LTK 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 29 :KLE 1l6oA 275 :ERG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 13 total=1624 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0359)R92 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0359)G93 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0359)E94 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0359)T95 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 Warning: unaligning (T0359)S96 because last residue in template chain is (1l6oA)H345 T0359 5 :TFD 1l6oA 252 :IIT T0359 10 :LTK 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 27 :DK 1l6oA 275 :ER T0359 31 :E 1l6oA 277 :G T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 13 total=1638 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)D7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)K12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 T0359 4 :ETF 1l6oA 252 :IIT T0359 9 :ELT 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 27 :D 1l6oA 275 :E T0359 30 :LE 1l6oA 276 :RG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I Number of specific fragments extracted= 12 number of extra gaps= 10 total=1650 Number of alignments=446 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)D7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)K12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 T0359 5 :TF 1l6oA 253 :IT T0359 9 :ELT 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 27 :D 1l6oA 275 :E T0359 30 :LE 1l6oA 276 :RG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :TGQT 1l6oA 327 :IVHK Number of specific fragments extracted= 12 number of extra gaps= 10 total=1662 Number of alignments=447 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)D7 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)K12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0359)R92 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0359)G93 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0359)E94 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0359)T95 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 Warning: unaligning (T0359)S96 because last residue in template chain is (1l6oA)H345 T0359 4 :ETF 1l6oA 252 :IIT T0359 9 :ELT 1l6oA 257 :LNM T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 27 :D 1l6oA 275 :E T0359 30 :LE 1l6oA 276 :RG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 80 :HTGQTVL 1l6oA 329 :HKPGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 13 number of extra gaps= 12 total=1675 # 1l6oA read from 1l6oA/merged-local-a2m # found chain 1l6oA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1l6oA)M251 Warning: unaligning (T0359)V8 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T256 Warning: unaligning (T0359)E9 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T256 Warning: unaligning (T0359)K12 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)K261 Warning: unaligning (T0359)N13 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)K261 Warning: unaligning (T0359)V14 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N263 Warning: unaligning (T0359)G16 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)L265 Warning: unaligning (T0359)L17 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)L265 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)S268 Warning: unaligning (T0359)T20 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)S268 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)N274 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)N274 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)G279 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G279 Warning: unaligning (T0359)G34 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)G280 Warning: unaligning (T0359)V46 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)A293 Warning: unaligning (T0359)E47 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)A293 Warning: unaligning (T0359)D62 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D309 Warning: unaligning (T0359)G63 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D309 Warning: unaligning (T0359)N65 because of BadResidue code CHAIN_BREAK_BEFORE in next template residue (1l6oA)F312 Warning: unaligning (T0359)L66 because of BadResidue code CHAIN_BREAK_BEFORE at template residue (1l6oA)F312 Warning: unaligning (T0359)G68 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)M315 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)M315 Warning: unaligning (T0359)T70 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1l6oA)S316 Warning: unaligning (T0359)R79 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)D326 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)D326 Warning: unaligning (T0359)L87 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)T337 Warning: unaligning (T0359)T88 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)T337 Warning: unaligning (T0359)L89 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)A339 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)A339 Warning: unaligning (T0359)R92 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1l6oA)E342 Warning: unaligning (T0359)G93 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1l6oA)E342 Warning: unaligning (T0359)E94 because of BadResidue code BAD_PEPTIDE in next template residue (1l6oA)H344 Warning: unaligning (T0359)T95 because of BadResidue code BAD_PEPTIDE at template residue (1l6oA)H344 Warning: unaligning (T0359)S96 because last residue in template chain is (1l6oA)H345 T0359 5 :TFD 1l6oA 252 :IIT T0359 10 :LT 1l6oA 257 :LN T0359 18 :G 1l6oA 266 :G T0359 21 :IAGY 1l6oA 269 :IVGQ T0359 27 :D 1l6oA 275 :E T0359 30 :LE 1l6oA 276 :RG T0359 35 :IFVKSITKSSA 1l6oA 281 :IYIGSIMKGGA T0359 48 :HDGRIQIGDQIIAV 1l6oA 294 :ADGRIEPGDMLLQV T0359 64 :T 1l6oA 310 :I T0359 67 :Q 1l6oA 313 :E T0359 71 :NQQAVEVL 1l6oA 317 :NDDAVRVL T0359 81 :T 1l6oA 327 :I T0359 82 :GQTVL 1l6oA 331 :PGPIV T0359 91 :R 1l6oA 340 :K Number of specific fragments extracted= 14 number of extra gaps= 12 total=1689 Number of alignments=448 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1qauA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1qauA/merged-local-a2m # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0359 6 :FDVELTKN 1qauA 16 :ISVRLFKR T0359 14 :VQGLGITIAGY 1qauA 25 :VGGLGFLVKER T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1qauA 36 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA T0359 83 :QTVLLTLMRRGET 1qauA 91 :THVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1693 Number of alignments=449 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1qauA)N14 T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAGYIG 1qauA 26 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1qauA 90 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1697 Number of alignments=450 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAGYIG 1qauA 26 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1qauA 90 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1701 Number of alignments=451 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1qauA)N14 T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAGYIG 1qauA 26 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGF Number of specific fragments extracted= 3 number of extra gaps= 0 total=1704 Number of alignments=452 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAGYIG 1qauA 26 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1707 Number of alignments=453 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1qauA)N14 T0359 5 :TFDVELTKNVQ 1qauA 15 :VISVRLFKRKV T0359 16 :GLGITIAGYIG 1qauA 27 :GLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEG Number of specific fragments extracted= 3 number of extra gaps= 0 total=1710 Number of alignments=454 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0359 5 :TFDVELTKNVQ 1qauA 15 :VISVRLFKRKV T0359 16 :GLGITIAGYIG 1qauA 27 :GLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1713 Number of alignments=455 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1qauA)N14 T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAG 1qauA 26 :GGLGFLVKE T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qauA 35 :RVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1qauA 90 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1717 Number of alignments=456 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAGY 1qauA 26 :GGLGFLVKER T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qauA 36 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRG 1qauA 90 :ETHVVLILRGPE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1721 Number of alignments=457 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1qauA)N14 T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAG 1qauA 26 :GGLGFLVKE T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qauA 35 :RVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGET 1qauA 90 :ETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1725 Number of alignments=458 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1qauA)N14 T0359 5 :TFDVELTKNVQ 1qauA 15 :VISVRLFKRKV T0359 16 :GLGITIAGY 1qauA 27 :GLGFLVKER T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qauA 36 :VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGE 1qauA 90 :ETHVVLILRGPEG Number of specific fragments extracted= 4 number of extra gaps= 0 total=1729 Number of alignments=459 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1qauA)N14 T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAGYIG 1qauA 26 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGETS 1qauA 89 :SETHVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1733 Number of alignments=460 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAGYIG 1qauA 26 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRR 1qauA 90 :ETHVVLILRGP Number of specific fragments extracted= 4 number of extra gaps= 0 total=1737 Number of alignments=461 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1qauA)N14 T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAGYIG 1qauA 26 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGETS 1qauA 90 :ETHVVLILRGPEGFT Number of specific fragments extracted= 4 number of extra gaps= 0 total=1741 Number of alignments=462 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1qauA)N14 T0359 5 :TFDVELTKNV 1qauA 15 :VISVRLFKRK T0359 15 :QGLGITIAGYIG 1qauA 26 :GGLGFLVKERVS T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 1qauA 38 :KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI T0359 82 :GQTVLLTLMRRGETS 1qauA 90 :ETHVVLILRGPEGFT Number of specific fragments extracted= 4 number of extra gaps= 0 total=1745 Number of alignments=463 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)S3 because first residue in template chain is (1qauA)N14 T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1qauA 15 :VISVRLFKRKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1qauA 39 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1747 Number of alignments=464 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0359 6 :FDVELTKNVQGLGITIAGYIGD 1qauA 17 :SVRLFKRKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1qauA 39 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1749 Number of alignments=465 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set T0359 6 :FDVELTKNVQGLGITIAGYIGD 1qauA 17 :SVRLFKRKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 1qauA 39 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS T0359 84 :TVLLTLMRRGE 1qauA 92 :HVVLILRGPEG Number of specific fragments extracted= 3 number of extra gaps= 0 total=1752 Number of alignments=466 # 1qauA read from 1qauA/merged-local-a2m # found chain 1qauA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1qauA)N14 T0359 5 :TFDVELT 1qauA 15 :VISVRLF T0359 12 :KNVQGLGITIAGYIGD 1qauA 23 :RKVGGLGFLVKERVSK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 1qauA 39 :PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS T0359 84 :TVLLTLMRRGET 1qauA 92 :HVVLILRGPEGF Number of specific fragments extracted= 4 number of extra gaps= 0 total=1756 Number of alignments=467 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1be9A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1be9A expands to /projects/compbio/data/pdb/1be9.pdb.gz 1be9A:# T0359 read from 1be9A/merged-local-a2m # 1be9A read from 1be9A/merged-local-a2m # adding 1be9A to template set # found chain 1be9A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1be9A 310 :EPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1758 Number of alignments=468 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1be9A 310 :EPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1760 Number of alignments=469 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1be9A 310 :EPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1762 Number of alignments=470 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1be9A 310 :EPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1764 Number of alignments=471 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 4 :ETFDVELTKNVQGLGITIAG 1be9A 310 :EPRRIVIHRGSTGLGFNIIG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1be9A 331 :EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1766 Number of alignments=472 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1768 Number of alignments=473 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 3 :SETFDVELTKNVQGLGITIAGY 1be9A 309 :REPRRIVIHRGSTGLGFNIIGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1be9A 331 :EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1770 Number of alignments=474 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGY 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1be9A 331 :EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1772 Number of alignments=475 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYI 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1be9A 332 :DGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1774 Number of alignments=476 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1776 Number of alignments=477 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1be9A 309 :REPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1778 Number of alignments=478 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1780 Number of alignments=479 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1782 Number of alignments=480 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1be9A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1784 Number of alignments=481 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1be9A 310 :EPRRIVIHRGSTGLGFNIIGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1be9A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1786 Number of alignments=482 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1be9A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1788 Number of alignments=483 # 1be9A read from 1be9A/merged-local-a2m # found chain 1be9A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1be9A 308 :PREPRRIVIHRGSTGLGFNIIGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1be9A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1790 Number of alignments=484 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwaA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1kwaA expands to /projects/compbio/data/pdb/1kwa.pdb.gz 1kwaA:# T0359 read from 1kwaA/merged-local-a2m # 1kwaA read from 1kwaA/merged-local-a2m # adding 1kwaA to template set # found chain 1kwaA in template set T0359 7 :DVELTK 1kwaA 490 :LVQFQK T0359 13 :NVQGLGITIAG 1kwaA 497 :TDEPMGITLKM T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1793 Number of alignments=485 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kwaA)R487 T0359 5 :TFDVELTKNVQ 1kwaA 488 :SRLVQFQKNTD T0359 16 :GLGITIAGY 1kwaA 500 :PMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 3 number of extra gaps= 0 total=1796 Number of alignments=486 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0359 5 :TFDVELTKNVQ 1kwaA 488 :SRLVQFQKNTD T0359 16 :GLGITIAGY 1kwaA 500 :PMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1799 Number of alignments=487 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0359 6 :FDVELTKN 1kwaA 489 :RLVQFQKN T0359 14 :VQGLGITIAGY 1kwaA 498 :DEPMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1802 Number of alignments=488 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0359 6 :FDVELTKN 1kwaA 489 :RLVQFQKN T0359 14 :VQGLGITIAGY 1kwaA 498 :DEPMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1805 Number of alignments=489 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0359 5 :TFDVELTKNVQGLGITIAGY 1kwaA 489 :RLVQFQKNTDEPMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 2 number of extra gaps= 0 total=1807 Number of alignments=490 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0359 6 :FDVELTKNVQGLGITIAGY 1kwaA 490 :LVQFQKNTDEPMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY Number of specific fragments extracted= 2 number of extra gaps= 0 total=1809 Number of alignments=491 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0359 6 :FDVELTKNVQ 1kwaA 489 :RLVQFQKNTD T0359 16 :GLGITIAGY 1kwaA 500 :PMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 3 number of extra gaps= 0 total=1812 Number of alignments=492 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0359 6 :FDVELTKNVQ 1kwaA 489 :RLVQFQKNTD T0359 16 :GLGITIAGY 1kwaA 500 :PMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1815 Number of alignments=493 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kwaA)R487 T0359 5 :TFDVELTKNVQ 1kwaA 488 :SRLVQFQKNTD T0359 16 :GLGITIAG 1kwaA 500 :PMGITLKM T0359 26 :G 1kwaA 508 :N T0359 29 :KLE 1kwaA 509 :ELN T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaA 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 5 number of extra gaps= 0 total=1820 Number of alignments=494 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kwaA)R487 Warning: unaligning (T0359)S96 because last residue in template chain is (1kwaA)F574 T0359 5 :TFDVELTKNVQ 1kwaA 488 :SRLVQFQKNTD T0359 16 :GLGITIAG 1kwaA 500 :PMGITLKM T0359 26 :G 1kwaA 508 :N T0359 29 :KLEP 1kwaA 509 :ELNH T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaA 513 :CIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 5 number of extra gaps= 0 total=1825 Number of alignments=495 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1kwaA)F574 T0359 6 :FDVELTKNV 1kwaA 489 :RLVQFQKNT T0359 15 :QGLGITIAGY 1kwaA 499 :EPMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1828 Number of alignments=496 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0359 6 :FDVELTKNV 1kwaA 489 :RLVQFQKNT T0359 15 :QGLGITIAGY 1kwaA 499 :EPMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY Number of specific fragments extracted= 3 number of extra gaps= 0 total=1831 Number of alignments=497 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kwaA)R487 Warning: unaligning (T0359)S96 because last residue in template chain is (1kwaA)F574 T0359 5 :TFDVELTKNV 1kwaA 488 :SRLVQFQKNT T0359 15 :QGLGITIAGY 1kwaA 499 :EPMGITLKMN T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaA 509 :ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1834 Number of alignments=498 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kwaA)R487 Warning: unaligning (T0359)S96 because last residue in template chain is (1kwaA)F574 T0359 5 :TFDVELTKNVQ 1kwaA 488 :SRLVQFQKNTD T0359 16 :GLGITIAGY 1kwaA 500 :PMGITLKMN T0359 27 :D 1kwaA 509 :E T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaA 510 :LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 4 number of extra gaps= 0 total=1838 Number of alignments=499 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1kwaA 489 :RLVQFQKNTDEPMGITLKMNELN T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1kwaA 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1840 Number of alignments=500 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set T0359 6 :FDVELTKNVQGLGITIAGYIGD 1kwaA 490 :LVQFQKNTDEPMGITLKMNELN T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1kwaA 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVP Number of specific fragments extracted= 2 number of extra gaps= 0 total=1842 Number of alignments=501 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1kwaA)F574 T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1kwaA 489 :RLVQFQKNTDEPMGITLKMNELN T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaA 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 2 number of extra gaps= 0 total=1844 Number of alignments=502 # 1kwaA read from 1kwaA/merged-local-a2m # found chain 1kwaA in template set Warning: unaligning (T0359)S96 because last residue in template chain is (1kwaA)F574 T0359 5 :TFDVELT 1kwaA 488 :SRLVQFQ T0359 12 :KNVQGLGITIAGYIGD 1kwaA 496 :NTDEPMGITLKMNELN T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaA 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 3 number of extra gaps= 0 total=1847 Number of alignments=503 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1gm1A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1gm1A expands to /projects/compbio/data/pdb/1gm1.pdb.gz 1gm1A:# T0359 read from 1gm1A/merged-local-a2m # 1gm1A read from 1gm1A/merged-local-a2m # adding 1gm1A to template set # found chain 1gm1A in template set T0359 1 :SMSETFDVELTKNVQGLGITIAGYIGD 1gm1A 9 :KPGDTFEVELAKTDGSLGISVTGGVNT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1gm1A 36 :SVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1849 Number of alignments=504 # 1gm1A read from 1gm1A/merged-local-a2m # found chain 1gm1A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1gm1A 10 :PGDTFEVELAKTDGSLGISVTGGVNT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1gm1A 36 :SVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEK Number of specific fragments extracted= 2 number of extra gaps= 0 total=1851 Number of alignments=505 # 1gm1A read from 1gm1A/merged-local-a2m # found chain 1gm1A in template set T0359 1 :SMSETFDVELTKNVQGLGITIAGYIG 1gm1A 9 :KPGDTFEVELAKTDGSLGISVTGGVN T0359 28 :KKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1gm1A 35 :TSVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1853 Number of alignments=506 # 1gm1A read from 1gm1A/merged-local-a2m # found chain 1gm1A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1gm1A 10 :PGDTFEVELAKTDGSLGISVTGGVN T0359 28 :KKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1gm1A 35 :TSVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKG Number of specific fragments extracted= 2 number of extra gaps= 0 total=1855 Number of alignments=507 # 1gm1A read from 1gm1A/merged-local-a2m # found chain 1gm1A in template set T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1gm1A 10 :PGDTFEVELAKTDGSLGISVTGGVNT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1gm1A 36 :SVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1857 Number of alignments=508 # 1gm1A read from 1gm1A/merged-local-a2m # found chain 1gm1A in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1gm1A 12 :DTFEVELAKTDGSLGISVTGGVNT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1gm1A 36 :SVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLL Number of specific fragments extracted= 2 number of extra gaps= 0 total=1859 Number of alignments=509 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1te0A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1te0A expands to /projects/compbio/data/pdb/1te0.pdb.gz 1te0A:# T0359 read from 1te0A/merged-local-a2m # 1te0A read from 1te0A/merged-local-a2m # adding 1te0A to template set # found chain 1te0A in template set Warning: unaligning (T0359)I19 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0359)T20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)Y24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 14 :VQGLG 1te0A 263 :GREIA T0359 21 :IA 1te0A 270 :HA T0359 29 :K 1te0A 278 :Q T0359 32 :PSGIFV 1te0A 279 :LQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GFTNQQAVEVLRHTGQTVLLTLMRRGET 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDKQ Number of specific fragments extracted= 9 number of extra gaps= 7 total=1868 Number of alignments=510 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)I19 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0359)T20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)Y24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 14 :VQGLG 1te0A 263 :GREIA T0359 21 :IA 1te0A 270 :HA T0359 29 :K 1te0A 278 :Q T0359 32 :PSGIFV 1te0A 279 :LQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GFTNQQAVEVLRHTGQTVLLTLMRRGET 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDKQ Number of specific fragments extracted= 9 number of extra gaps= 7 total=1877 Number of alignments=511 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)I19 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0359)T20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)Y24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 10 :LTKNVQGLG 1te0A 259 :IGIGGREIA T0359 21 :IA 1te0A 270 :HA T0359 31 :EPSGIFV 1te0A 278 :QLQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GFTNQQAVEVLRHTGQTVLLTLMRRGET 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDKQ Number of specific fragments extracted= 8 number of extra gaps= 7 total=1885 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)I19 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0359)T20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)Y24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)K28 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 9 :ELTKNVQGLG 1te0A 258 :YIGIGGREIA T0359 21 :IA 1te0A 270 :HA T0359 31 :EPSGIFV 1te0A 278 :QLQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GFTNQQAVEVLRHTGQTVLLTLMRRGET 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDKQ Number of specific fragments extracted= 8 number of extra gaps= 7 total=1893 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)I19 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0359)T20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)Y24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)R51 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 14 :VQGLG 1te0A 263 :GREIA T0359 21 :IA 1te0A 270 :HA T0359 31 :EPSGIFV 1te0A 278 :QLQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GFTNQQAVEVLRHTGQTVLLTLMRRGET 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDKQ Number of specific fragments extracted= 8 number of extra gaps= 7 total=1901 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)I19 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0359)T20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0359)G23 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)Y24 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0359)I25 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)G26 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)R51 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 14 :VQGLG 1te0A 263 :GREIA T0359 21 :IA 1te0A 270 :HA T0359 31 :EPSGIFV 1te0A 278 :QLQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GFTNQQAVEVLRHTGQTVLLTLMRRGET 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDKQ Number of specific fragments extracted= 8 number of extra gaps= 7 total=1909 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 33 :SGIFV 1te0A 280 :QGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GF 1te0A 314 :SA Number of specific fragments extracted= 6 number of extra gaps= 5 total=1915 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 34 :GIFV 1te0A 281 :GIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GF 1te0A 314 :SA T0359 72 :QQAVEVLRHT 1te0A 316 :LETMDQVAEI T0359 82 :GQTVLLTLMRR 1te0A 328 :GSVIPVVVMRD Number of specific fragments extracted= 8 number of extra gaps= 5 total=1923 Number of alignments=512 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)K29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0359)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0359)S33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 22 :AGYIGDK 1te0A 261 :IGGREIA T0359 31 :EP 1te0A 270 :HA T0359 34 :GIFV 1te0A 281 :GIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 70 :TNQQAVEVLRHT 1te0A 314 :SALETMDQVAEI T0359 82 :GQTVLLTLMRRGE 1te0A 328 :GSVIPVVVMRDDK Number of specific fragments extracted= 9 number of extra gaps= 7 total=1932 Number of alignments=513 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0359)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)E31 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 18 :GITIAGYI 1te0A 260 :GIGGREIA T0359 28 :KK 1te0A 270 :HA T0359 33 :SGIFV 1te0A 280 :QGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 70 :TNQQAVEVLRHT 1te0A 314 :SALETMDQVAEI T0359 82 :GQTVLLTLMRRGE 1te0A 328 :GSVIPVVVMRDDK Number of specific fragments extracted= 9 number of extra gaps= 7 total=1941 Number of alignments=514 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)I25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 31 :EPSGIFV 1te0A 278 :QLQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GF 1te0A 314 :SA Number of specific fragments extracted= 6 number of extra gaps= 6 total=1947 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)I25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 31 :EPSGIFV 1te0A 278 :QLQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GF 1te0A 314 :SA T0359 72 :QQAVEVLRHT 1te0A 316 :LETMDQVAEI T0359 82 :GQTVLLTLMRRG 1te0A 328 :GSVIPVVVMRDD Number of specific fragments extracted= 8 number of extra gaps= 6 total=1955 Number of alignments=515 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)K12 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1te0A)E227 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G231 Warning: unaligning (T0359)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G231 Warning: unaligning (T0359)L17 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)I232 Warning: unaligning (T0359)K29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0359)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0359)S33 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 13 :NV 1te0A 228 :TP T0359 18 :GITI 1te0A 233 :GFAI T0359 22 :AGYIGDK 1te0A 261 :IGGREIA T0359 31 :EP 1te0A 270 :HA T0359 34 :GIFV 1te0A 281 :GIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 70 :TNQQAVEVLRHT 1te0A 314 :SALETMDQVAEI T0359 82 :GQTVLLTLMRRGET 1te0A 328 :GSVIPVVVMRDDKQ Number of specific fragments extracted= 11 number of extra gaps= 9 total=1966 Number of alignments=516 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L269 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L269 Warning: unaligning (T0359)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)E31 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 17 :LGITIAGYI 1te0A 259 :IGIGGREIA T0359 28 :KK 1te0A 270 :HA T0359 34 :GIFV 1te0A 281 :GIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 70 :TNQQAVEVLRHT 1te0A 314 :SALETMDQVAEI T0359 82 :GQTVLLTLMRRGE 1te0A 328 :GSVIPVVVMRDDK Number of specific fragments extracted= 9 number of extra gaps= 7 total=1975 Number of alignments=517 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)I25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 T0359 27 :D 1te0A 278 :Q T0359 32 :PSGIFV 1te0A 279 :LQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP Number of specific fragments extracted= 6 number of extra gaps= 5 total=1981 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)I25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 31 :EPSGIFV 1te0A 278 :QLQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 68 :GF 1te0A 314 :SA Number of specific fragments extracted= 6 number of extra gaps= 6 total=1987 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0359)D27 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)K28 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)K29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)F69 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 31 :EPSGIFV 1te0A 278 :QLQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 70 :TNQQAVEVLRHTGQTVLLTLMRRGETS 1te0A 314 :SALETMDQVAEIRPGSVIPVVVMRDDK Number of specific fragments extracted= 6 number of extra gaps= 6 total=1993 # 1te0A read from 1te0A/merged-local-a2m # found chain 1te0A in template set Warning: unaligning (T0359)I25 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G273 Warning: unaligning (T0359)G26 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G273 Warning: unaligning (T0359)D27 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G275 Warning: unaligning (T0359)K28 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G275 Warning: unaligning (T0359)K29 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)D277 Warning: unaligning (T0359)L30 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)D277 Warning: unaligning (T0359)K38 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)E286 Warning: unaligning (T0359)S39 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)E286 Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)G291 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)G291 Warning: unaligning (T0359)E47 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1te0A)N295 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1te0A)N295 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)G297 Warning: unaligning (T0359)G50 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)G297 Warning: unaligning (T0359)D56 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1te0A)L303 Warning: unaligning (T0359)Q57 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1te0A)L303 Warning: unaligning (T0359)L66 because of BadResidue code BAD_PEPTIDE in next template residue (1te0A)I313 Warning: unaligning (T0359)Q67 because of BadResidue code BAD_PEPTIDE at template residue (1te0A)I313 T0359 31 :EPSGIFV 1te0A 278 :QLQGIVV T0359 40 :ITK 1te0A 287 :VSP T0359 45 :AV 1te0A 292 :PA T0359 52 :IQIG 1te0A 298 :IQVN T0359 58 :IIAVDGTN 1te0A 304 :IISVDNKP T0359 70 :TNQQAVEVLRHT 1te0A 314 :SALETMDQVAEI T0359 82 :GQTVLLTLMRRGE 1te0A 328 :GSVIPVVVMRDDK Number of specific fragments extracted= 7 number of extra gaps= 6 total=2000 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1kwaB/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1kwaB expands to /projects/compbio/data/pdb/1kwa.pdb.gz 1kwaB:# T0359 read from 1kwaB/merged-local-a2m # 1kwaB read from 1kwaB/merged-local-a2m # adding 1kwaB to template set # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)P32 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0359 7 :DVELTK 1kwaB 490 :LVQFQK T0359 13 :NVQGLGITIA 1kwaB 497 :TDEPMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 3 number of extra gaps= 1 total=2003 Number of alignments=518 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)Y24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0359 5 :TFDVELTKNVQGLGITIA 1kwaB 489 :RLVQFQKNTDEPMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 2 number of extra gaps= 1 total=2005 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)Y24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0359 6 :FDVELTKNVQGLGITIA 1kwaB 490 :LVQFQKNTDEPMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 2 number of extra gaps= 1 total=2007 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)P32 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0359 6 :FDVELTKNVQ 1kwaB 489 :RLVQFQKNTD T0359 16 :GLGITIA 1kwaB 500 :PMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 3 number of extra gaps= 1 total=2010 Number of alignments=519 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)Y24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0359 6 :FDVELTKNVQ 1kwaB 489 :RLVQFQKNTD T0359 16 :GLGITIA 1kwaB 500 :PMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 3 number of extra gaps= 1 total=2013 Number of alignments=520 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)E31 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 Warning: unaligning (T0359)T95 because last residue in template chain is (1kwaB)F574 T0359 5 :TFDVELTKNVQ 1kwaB 488 :SRLVQFQKNTD T0359 16 :GLGITIA 1kwaB 500 :PMGITLK T0359 32 :P 1kwaB 511 :N T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kwaB 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 4 number of extra gaps= 1 total=2017 Number of alignments=521 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)P32 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0359 5 :TFDVELTKNVQ 1kwaB 488 :SRLVQFQKNTD T0359 16 :GLGITIA 1kwaB 500 :PMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY Number of specific fragments extracted= 3 number of extra gaps= 1 total=2020 Number of alignments=522 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)P32 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 Warning: unaligning (T0359)S96 because last residue in template chain is (1kwaB)F574 T0359 6 :FDVELTKNV 1kwaB 489 :RLVQFQKNT T0359 15 :QGLGITIA 1kwaB 499 :EPMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2023 Number of alignments=523 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)P32 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0359 6 :FDVELTKNV 1kwaB 489 :RLVQFQKNT T0359 15 :QGLGITIA 1kwaB 499 :EPMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYR Number of specific fragments extracted= 3 number of extra gaps= 1 total=2026 Number of alignments=524 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)P32 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 Warning: unaligning (T0359)S96 because last residue in template chain is (1kwaB)F574 T0359 5 :TFDVELTKNVQ 1kwaB 488 :SRLVQFQKNTD T0359 16 :GLGITIA 1kwaB 500 :PMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2029 Number of alignments=525 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)E4 because first residue in template chain is (1kwaB)R487 Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)P32 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 Warning: unaligning (T0359)S96 because last residue in template chain is (1kwaB)F574 T0359 5 :TFDVELTKNVQ 1kwaB 488 :SRLVQFQKNTD T0359 16 :GLGITIA 1kwaB 500 :PMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2032 Number of alignments=526 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)Y24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0359 5 :TFDVELTKNVQGLGITIA 1kwaB 489 :RLVQFQKNTDEPMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVP Number of specific fragments extracted= 2 number of extra gaps= 1 total=2034 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)Y24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0359 6 :FDVELTKNVQGLGITIA 1kwaB 490 :LVQFQKNTDEPMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 2 number of extra gaps= 1 total=2036 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)Y24 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 Warning: unaligning (T0359)S96 because last residue in template chain is (1kwaB)F574 T0359 5 :TFDVELTKNVQGLGITIA 1kwaB 489 :RLVQFQKNTDEPMGITLK T0359 25 :I 1kwaB 511 :N T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1kwaB 512 :HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2039 Number of alignments=527 # 1kwaB read from 1kwaB/merged-local-a2m # found chain 1kwaB in template set Warning: unaligning (T0359)G23 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1kwaB)L510 Warning: unaligning (T0359)P32 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1kwaB)L510 T0359 5 :TFDVELT 1kwaB 488 :SRLVQFQ T0359 12 :KNVQGLGITIA 1kwaB 496 :NTDEPMGITLK T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1kwaB 511 :NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPS Number of specific fragments extracted= 3 number of extra gaps= 1 total=2042 Number of alignments=528 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1nteA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1nteA expands to /projects/compbio/data/pdb/1nte.pdb.gz 1nteA:Skipped atom 107, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 281, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 283, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 285, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 287, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 289, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 291, because occupancy 0.400 <= existing 0.600 in 1nteA Skipped atom 332, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 334, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 336, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 338, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 340, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 373, because occupancy 0.500 <= existing 0.500 in 1nteA Skipped atom 595, because occupancy 0.300 <= existing 0.700 in 1nteA Skipped atom 597, because occupancy 0.300 <= existing 0.700 in 1nteA Skipped atom 599, because occupancy 0.300 <= existing 0.700 in 1nteA Skipped atom 601, because occupancy 0.300 <= existing 0.700 in 1nteA # T0359 read from 1nteA/merged-local-a2m # 1nteA read from 1nteA/merged-local-a2m # adding 1nteA to template set # found chain 1nteA in template set Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 1 :SM 1nteA 192 :GA T0359 5 :TFDVELTKNVQG 1nteA 196 :PRTITMHKDSTG T0359 17 :LGITIAGY 1nteA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 5 number of extra gaps= 1 total=2047 Number of alignments=529 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 5 :TFDVELTKNVQG 1nteA 196 :PRTITMHKDSTG T0359 17 :LGITIAGY 1nteA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 1 total=2051 Number of alignments=530 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 5 :TFDVELTKNV 1nteA 196 :PRTITMHKDS T0359 15 :QGLGITIA 1nteA 207 :GHVGFIFK T0359 34 :GIFVKSITKSSAVEHDG 1nteA 215 :NGKITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM Number of specific fragments extracted= 4 number of extra gaps= 1 total=2055 Number of alignments=531 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set T0359 6 :FDVELTKNV 1nteA 197 :RTITMHKDS T0359 15 :QGLGITIA 1nteA 207 :GHVGFIFK T0359 34 :GIFVKSITKSSAVEHDG 1nteA 215 :NGKITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM Number of specific fragments extracted= 4 number of extra gaps= 0 total=2059 Number of alignments=532 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 Warning: unaligning (T0359)G93 because last residue in template chain is (1nteA)F273 T0359 1 :SM 1nteA 192 :GA T0359 5 :TFDVELTKNVQG 1nteA 196 :PRTITMHKDSTG T0359 17 :LGITIAGY 1nteA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 5 number of extra gaps= 1 total=2064 Number of alignments=533 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 5 :TFDVELTKNVQG 1nteA 196 :PRTITMHKDSTG T0359 17 :LGITIAGY 1nteA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 1 total=2068 Number of alignments=534 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 Warning: unaligning (T0359)G93 because last residue in template chain is (1nteA)F273 T0359 1 :SM 1nteA 192 :GA T0359 5 :TFDVELTKNVQG 1nteA 196 :PRTITMHKDSTG T0359 17 :LGITIAGY 1nteA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 5 number of extra gaps= 1 total=2073 Number of alignments=535 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 1 :SM 1nteA 192 :GA T0359 5 :TFDVELTKNVQG 1nteA 196 :PRTITMHKDSTG T0359 17 :LGITIA 1nteA 209 :VGFIFK T0359 32 :PS 1nteA 215 :NG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 6 number of extra gaps= 1 total=2079 Number of alignments=536 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 5 :TFDVELTKNVQG 1nteA 196 :PRTITMHKDSTG T0359 17 :LGITIAGY 1nteA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 1 total=2083 Number of alignments=537 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 5 :TFDVELTKNVQG 1nteA 196 :PRTITMHKDSTG T0359 17 :LGITIAGY 1nteA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 4 number of extra gaps= 1 total=2087 Number of alignments=538 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 Warning: unaligning (T0359)G93 because last residue in template chain is (1nteA)F273 T0359 1 :SM 1nteA 192 :GA T0359 5 :TFDVELTKNVQG 1nteA 196 :PRTITMHKDSTG T0359 17 :LGITIAGY 1nteA 209 :VGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 5 number of extra gaps= 1 total=2092 Number of alignments=539 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 1 :SM 1nteA 192 :GA T0359 5 :TFDVELTKNVQG 1nteA 196 :PRTITMHKDSTG T0359 17 :LGITIA 1nteA 209 :VGFIFK T0359 32 :PS 1nteA 215 :NG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 6 number of extra gaps= 1 total=2098 Number of alignments=540 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)M2 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 4 :ETFDVELTKNVQGLGITIAGY 1nteA 196 :PRTITMHKDSTGHVGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP Number of specific fragments extracted= 3 number of extra gaps= 1 total=2101 Number of alignments=541 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYI 1nteA 196 :PRTITMHKDSTGHVGFIFKNGK T0359 37 :VKSITKSSAVEHDG 1nteA 218 :ITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM Number of specific fragments extracted= 3 number of extra gaps= 0 total=2104 Number of alignments=542 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)M2 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 4 :ETFDVELTKNVQGLGITIAGY 1nteA 196 :PRTITMHKDSTGHVGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 3 number of extra gaps= 1 total=2107 Number of alignments=543 # 1nteA read from 1nteA/merged-local-a2m # found chain 1nteA in template set Warning: unaligning (T0359)S3 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1nteA)D195 Warning: unaligning (T0359)E4 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1nteA)D195 T0359 5 :TFDVELT 1nteA 196 :PRTITMH T0359 12 :KNVQGLGITIAGY 1nteA 204 :DSTGHVGFIFKNG T0359 36 :FVKSITKSSAVEHDG 1nteA 217 :KITSIVKDSSAARNG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1nteA 232 :LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA Number of specific fragments extracted= 4 number of extra gaps= 1 total=2111 Number of alignments=544 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2fcfA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 2fcfA/merged-local-a2m # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 T0359 4 :ETFDVELTKN 2fcfA 1148 :QPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 3 number of extra gaps= 0 total=2114 Number of alignments=545 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 T0359 4 :ETFDVELTKN 2fcfA 1148 :QPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 3 number of extra gaps= 0 total=2117 Number of alignments=546 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 T0359 4 :ETFDVELTKN 2fcfA 1148 :QPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 0 total=2120 Number of alignments=547 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 T0359 4 :ETFDVELTKN 2fcfA 1148 :QPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS Number of specific fragments extracted= 3 number of extra gaps= 0 total=2123 Number of alignments=548 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQ Number of specific fragments extracted= 1 number of extra gaps= 0 total=2124 Number of alignments=549 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQS Number of specific fragments extracted= 1 number of extra gaps= 0 total=2125 Number of alignments=550 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 4 :ETFDVELTKN 2fcfA 1148 :QPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS Number of specific fragments extracted= 3 number of extra gaps= 1 total=2128 Number of alignments=551 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 4 :ETFDVELTKN 2fcfA 1148 :QPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSII Number of specific fragments extracted= 3 number of extra gaps= 1 total=2131 Number of alignments=552 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 1 :SMSETFDVELTKN 2fcfA 1145 :QSMQPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=2134 Number of alignments=553 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 1 :SMSETFDVELTKN 2fcfA 1145 :QSMQPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=2137 Number of alignments=554 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 4 :ETFDVELTKN 2fcfA 1148 :QPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTR Number of specific fragments extracted= 3 number of extra gaps= 1 total=2140 Number of alignments=555 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 4 :ETFDVELTKN 2fcfA 1148 :QPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSII Number of specific fragments extracted= 3 number of extra gaps= 1 total=2143 Number of alignments=556 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 1 :SMSETFDVELTKN 2fcfA 1145 :QSMQPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=2146 Number of alignments=557 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)V14 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 1 :SMSETFDVELTKN 2fcfA 1145 :QSMQPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 3 number of extra gaps= 1 total=2149 Number of alignments=558 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)N13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 2 :MSETFDVELTK 2fcfA 1147 :MQPRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQ Number of specific fragments extracted= 3 number of extra gaps= 1 total=2152 Number of alignments=559 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)N13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 4 :ETFDVELTK 2fcfA 1149 :PRRVELWRE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLM 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQ Number of specific fragments extracted= 3 number of extra gaps= 1 total=2155 Number of alignments=560 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)N13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 2 :MSETFDVEL 2fcfA 1146 :SMQPRRVEL T0359 11 :TK 2fcfA 1156 :RE T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2159 Number of alignments=561 # 2fcfA read from 2fcfA/merged-local-a2m # found chain 2fcfA in template set Warning: unaligning (T0359)N13 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)K1160 Warning: unaligning (T0359)Q15 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)K1160 Warning: unaligning (T0359)I25 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (2fcfA)G1184 Warning: unaligning (T0359)G26 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (2fcfA)G1184 T0359 2 :MSETFDVELT 2fcfA 1146 :SMQPRRVELW T0359 12 :K 2fcfA 1157 :E T0359 16 :GLGITIAGY 2fcfA 1161 :SLGISIVGG T0359 35 :IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 2fcfA 1185 :IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIISTRL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2163 Number of alignments=562 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1vj6A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1vj6A expands to /projects/compbio/data/pdb/1vj6.pdb.gz 1vj6A:# T0359 read from 1vj6A/merged-local-a2m # 1vj6A read from 1vj6A/merged-local-a2m # adding 1vj6A to template set # found chain 1vj6A in template set Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0359)D49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0359 1 :SMSETFDVELTKNVQGLGITIAGYIGD 1vj6A 9 :KPGDTFEVELAKTDGSLGISVTGGVNT T0359 29 :KLEPSGIFVKSITK 1vj6A 36 :SVRHGGIYVKAIIP T0359 45 :AVE 1vj6A 52 :AAE T0359 50 :GR 1vj6A 57 :GR T0359 54 :IGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKG Number of specific fragments extracted= 5 number of extra gaps= 3 total=2168 Number of alignments=563 # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0359)D49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1vj6A 10 :PGDTFEVELAKTDGSLGISVTGGVNT T0359 29 :KLEPSGIFVKSITK 1vj6A 36 :SVRHGGIYVKAIIP T0359 45 :AVE 1vj6A 52 :AAE T0359 50 :GR 1vj6A 57 :GR T0359 54 :IGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEK Number of specific fragments extracted= 5 number of extra gaps= 3 total=2173 Number of alignments=564 # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0359)D49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0359 1 :SMSETFDVELTKNVQGLGITIAGYIG 1vj6A 9 :KPGDTFEVELAKTDGSLGISVTGGVN T0359 28 :KKLEPSGIFVKSITK 1vj6A 35 :TSVRHGGIYVKAIIP T0359 45 :AVE 1vj6A 52 :AAE T0359 50 :GR 1vj6A 57 :GR T0359 54 :IGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKG Number of specific fragments extracted= 5 number of extra gaps= 3 total=2178 Number of alignments=565 # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0359)D49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1vj6A 10 :PGDTFEVELAKTDGSLGISVTGGVN T0359 28 :KKLEPSGIFVKSITK 1vj6A 35 :TSVRHGGIYVKAIIP T0359 45 :AVE 1vj6A 52 :AAE T0359 50 :GR 1vj6A 57 :GR T0359 54 :IGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKG Number of specific fragments extracted= 5 number of extra gaps= 3 total=2183 Number of alignments=566 # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0359)D49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1vj6A 10 :PGDTFEVELAKTDGSLGISVTGGVNT T0359 29 :KLEPSGIFVKSITK 1vj6A 36 :SVRHGGIYVKAIIP T0359 45 :AVE 1vj6A 52 :AAE T0359 50 :GR 1vj6A 57 :GR T0359 54 :IGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLL Number of specific fragments extracted= 5 number of extra gaps= 3 total=2188 Number of alignments=567 # 1vj6A read from 1vj6A/merged-local-a2m # found chain 1vj6A in template set Warning: unaligning (T0359)S43 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)G51 Warning: unaligning (T0359)S44 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)G51 Warning: unaligning (T0359)H48 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)D56 Warning: unaligning (T0359)D49 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)D56 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1vj6A)H60 Warning: unaligning (T0359)Q53 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1vj6A)H60 T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1vj6A 12 :DTFEVELAKTDGSLGISVTGGVNT T0359 29 :KLEPSGIFVKSITK 1vj6A 36 :SVRHGGIYVKAIIP T0359 45 :AVE 1vj6A 52 :AAE T0359 50 :GR 1vj6A 57 :GR T0359 54 :IGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1vj6A 61 :KGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLL Number of specific fragments extracted= 5 number of extra gaps= 3 total=2193 Number of alignments=568 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1tp5A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1tp5A/merged-local-a2m # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1tp5A 310 :EPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGETSV 1tp5A 390 :AQYKPEEYS Number of specific fragments extracted= 3 number of extra gaps= 1 total=2196 Number of alignments=569 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGET 1tp5A 390 :AQYKPEE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2199 Number of alignments=570 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1tp5A 310 :EPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGE 1tp5A 390 :AQYKPE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2202 Number of alignments=571 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGE 1tp5A 390 :AQYKPE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2205 Number of alignments=572 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1tp5A 310 :EPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGE 1tp5A 390 :AQYKPE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2208 Number of alignments=573 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1tp5A 310 :EPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGE 1tp5A 390 :AQYKPE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2211 Number of alignments=574 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGE 1tp5A 390 :AQYKPE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2214 Number of alignments=575 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 3 :SETFDVELTKNVQGLGITIAGY 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 331 :EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGE 1tp5A 390 :AQYKPE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2217 Number of alignments=576 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGY 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 331 :EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMR 1tp5A 390 :AQY Number of specific fragments extracted= 3 number of extra gaps= 1 total=2220 Number of alignments=577 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGY 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGG T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 331 :EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRR 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2223 Number of alignments=578 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGETS 1tp5A 390 :AQYKPEEY Number of specific fragments extracted= 3 number of extra gaps= 1 total=2226 Number of alignments=579 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1tp5A 309 :REPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGE 1tp5A 390 :AQYKPE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2229 Number of alignments=580 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMR 1tp5A 390 :AQY Number of specific fragments extracted= 3 number of extra gaps= 1 total=2232 Number of alignments=581 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGYIG 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGED T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 333 :GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRR 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2235 Number of alignments=582 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRGE 1tp5A 390 :AQYKPE Number of specific fragments extracted= 3 number of extra gaps= 1 total=2238 Number of alignments=583 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1tp5A 310 :EPRRIVIHRGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRRG 1tp5A 390 :AQYKP Number of specific fragments extracted= 3 number of extra gaps= 1 total=2241 Number of alignments=584 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMR 1tp5A 390 :AQY Number of specific fragments extracted= 3 number of extra gaps= 1 total=2244 Number of alignments=585 # 1tp5A read from 1tp5A/merged-local-a2m # found chain 1tp5A in template set Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1tp5A)I389 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1tp5A)I389 T0359 2 :MSETFDVELTKNVQGLGITIAGYIGD 1tp5A 308 :PREPRRIVIHRGSTGLGFNIVGGEDG T0359 33 :SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 1tp5A 334 :EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT T0359 89 :LMRR 1tp5A 390 :AQYK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2247 Number of alignments=586 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1mfgA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1mfgA/merged-local-a2m # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 4 :ETFDVELTKNV 1mfgA 1279 :MEIRVRVEKDP T0359 16 :GLGITIAGYIG 1mfgA 1290 :ELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRR 1mfgA 1365 :IVRE Number of specific fragments extracted= 6 number of extra gaps= 2 total=2253 Number of alignments=587 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 6 :FDVELTKNV 1mfgA 1281 :IRVRVEKDP T0359 16 :GLGITIAGYIG 1mfgA 1290 :ELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRG 1mfgA 1365 :IVREV Number of specific fragments extracted= 6 number of extra gaps= 2 total=2259 Number of alignments=588 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 3 :SETFDVELTKNVQ 1mfgA 1278 :SMEIRVRVEKDPE T0359 17 :LGITIAGYIG 1mfgA 1291 :LGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRGE 1mfgA 1365 :IVREVS Number of specific fragments extracted= 6 number of extra gaps= 2 total=2265 Number of alignments=589 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 5 :TFDVELTKN 1mfgA 1280 :EIRVRVEKD T0359 15 :QGLGITIAGYIG 1mfgA 1289 :PELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPA T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1326 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRG 1mfgA 1365 :IVREV Number of specific fragments extracted= 6 number of extra gaps= 2 total=2271 Number of alignments=590 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 6 :FDVELTKNVQGLGITIAGYIGD 1mfgA 1280 :EIRVRVEKDPELGFSISGGVGG T0359 28 :KKLEPSGIFVKSITKSSAV 1mfgA 1306 :FRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRR 1mfgA 1365 :IVRE Number of specific fragments extracted= 5 number of extra gaps= 2 total=2276 Number of alignments=591 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 6 :FDVELTKNVQGLGITIAGYIGD 1mfgA 1280 :EIRVRVEKDPELGFSISGGVGG T0359 28 :KKLEPSGIFVKSITKSSAV 1mfgA 1306 :FRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRR 1mfgA 1365 :IVRE Number of specific fragments extracted= 5 number of extra gaps= 2 total=2281 Number of alignments=592 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 11 :TKNVQGLGITIAGYIG 1mfgA 1285 :VEKDPELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRGE 1mfgA 1365 :IVREVS Number of specific fragments extracted= 5 number of extra gaps= 2 total=2286 Number of alignments=593 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 8 :VELTKN 1mfgA 1283 :VRVEKD T0359 15 :QGLGITIAGYIG 1mfgA 1289 :PELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVE 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1326 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRG 1mfgA 1365 :IVREV Number of specific fragments extracted= 6 number of extra gaps= 2 total=2292 Number of alignments=594 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 3 :SETFDVELTKNV 1mfgA 1278 :SMEIRVRVEKDP T0359 16 :GLGITIAGYIG 1mfgA 1290 :ELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVEH 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPASK T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1327 :LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRGE 1mfgA 1365 :IVREVS Number of specific fragments extracted= 6 number of extra gaps= 2 total=2298 Number of alignments=595 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 Warning: unaligning (T0359)T95 because last residue in template chain is (1mfgA)S1371 T0359 5 :TFDVELTKNV 1mfgA 1280 :EIRVRVEKDP T0359 16 :GLGITIAGYIG 1mfgA 1290 :ELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVEH 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPASK T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1327 :LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRGE 1mfgA 1365 :IVREVS Number of specific fragments extracted= 6 number of extra gaps= 2 total=2304 Number of alignments=596 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)E4 because first residue in template chain is (1mfgA)G1277 Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 5 :TFDVELTKNVQG 1mfgA 1278 :SMEIRVRVEKDP T0359 17 :LGITIAGYI 1mfgA 1291 :LGFSISGGV T0359 26 :GDKKLEPSGIFVKSITKSSAVE 1mfgA 1304 :NPFRPDDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1326 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRG 1mfgA 1365 :IVREV Number of specific fragments extracted= 6 number of extra gaps= 2 total=2310 Number of alignments=597 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 8 :VELTKN 1mfgA 1283 :VRVEKD T0359 15 :QGLGITIAGYIGDKKL 1mfgA 1289 :PELGFSISGGVGGRGN T0359 31 :EPSGIFVKSITKSSAVEH 1mfgA 1309 :DDDGIFVTRVQPEGPASK T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1327 :LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRG 1mfgA 1365 :IVREV Number of specific fragments extracted= 6 number of extra gaps= 2 total=2316 Number of alignments=598 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1mfgA)G1277 Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 Warning: unaligning (T0359)T95 because last residue in template chain is (1mfgA)S1371 T0359 3 :SETFDVELTKNV 1mfgA 1278 :SMEIRVRVEKDP T0359 16 :GLGITIAGYIGDKKL 1mfgA 1290 :ELGFSISGGVGGRGN T0359 31 :EPSGIFVKSITKSSAVEH 1mfgA 1309 :DDDGIFVTRVQPEGPASK T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1327 :LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRGE 1mfgA 1365 :IVREVS Number of specific fragments extracted= 6 number of extra gaps= 2 total=2322 Number of alignments=599 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1mfgA)G1277 Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 Warning: unaligning (T0359)T95 because last residue in template chain is (1mfgA)S1371 T0359 3 :SETFDVELTKNV 1mfgA 1278 :SMEIRVRVEKDP T0359 16 :GLGITIAGYIGDKKL 1mfgA 1290 :ELGFSISGGVGGRGN T0359 31 :EPSGIFVKSITKSSAVE 1mfgA 1309 :DDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1326 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRGE 1mfgA 1365 :IVREVS Number of specific fragments extracted= 6 number of extra gaps= 2 total=2328 Number of alignments=600 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)S3 because first residue in template chain is (1mfgA)G1277 Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1mfgA 1278 :SMEIRVRVEKDPELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVE 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1326 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMR 1mfgA 1365 :IVR Number of specific fragments extracted= 5 number of extra gaps= 2 total=2333 Number of alignments=601 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 T0359 7 :DVELTKNVQGLGITIAGYIG 1mfgA 1281 :IRVRVEKDPELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVE 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1326 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMR 1mfgA 1365 :IVR Number of specific fragments extracted= 5 number of extra gaps= 2 total=2338 Number of alignments=602 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1mfgA)G1277 Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 Warning: unaligning (T0359)T95 because last residue in template chain is (1mfgA)S1371 T0359 3 :SETFDVELTKNVQ 1mfgA 1278 :SMEIRVRVEKDPE T0359 17 :LGITIAGYIG 1mfgA 1291 :LGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRGE 1mfgA 1365 :IVREVS Number of specific fragments extracted= 6 number of extra gaps= 2 total=2344 Number of alignments=603 # 1mfgA read from 1mfgA/merged-local-a2m # found chain 1mfgA in training set Warning: unaligning (T0359)Q83 because of BadResidue code BAD_PEPTIDE in next template residue (1mfgA)T1360 Warning: unaligning (T0359)T84 because of BadResidue code BAD_PEPTIDE at template residue (1mfgA)T1360 Warning: unaligning (T0359)L87 because of BadResidue code NON_PLANAR_PEPTIDE in next template residue (1mfgA)I1364 Warning: unaligning (T0359)T88 because of BadResidue code NON_PLANAR_PEPTIDE at template residue (1mfgA)I1364 Warning: unaligning (T0359)T95 because last residue in template chain is (1mfgA)S1371 T0359 3 :SETFDVELTKNVQ 1mfgA 1278 :SMEIRVRVEKDPE T0359 17 :LGITIAGYIG 1mfgA 1291 :LGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 1mfgA 1305 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 1mfgA 1325 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ T0359 85 :VL 1mfgA 1361 :VE T0359 89 :LMRRGE 1mfgA 1365 :IVREVS Number of specific fragments extracted= 6 number of extra gaps= 2 total=2350 Number of alignments=604 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1n7fA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1n7fA/merged-local-a2m # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1n7fA 669 :IIYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2352 Number of alignments=605 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1n7fA 669 :IIYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2354 Number of alignments=606 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)S3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 4 :ETFDVELTKNVQGLGITIAGYIGDKK 1n7fA 669 :IIYTVELKRYGGPLGITISGTEEPFD T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 695 :PIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2356 Number of alignments=607 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0359 5 :TFDVELTKNVQGLGITIAGYIGDKK 1n7fA 670 :IYTVELKRYGGPLGITISGTEEPFD T0359 34 :GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 695 :PIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2358 Number of alignments=608 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0359 8 :VELTKNVQGLGITIAGYIG 1n7fA 673 :VELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2360 Number of alignments=609 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0359 7 :DVELTKNVQGLGITIAGYIG 1n7fA 672 :TVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2362 Number of alignments=610 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 5 :TFDVELTKNVQGLGITIAGY 1n7fA 670 :IYTVELKRYGGPLGITISGT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 690 :EEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2364 Number of alignments=611 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 5 :TFDVELTKNVQGLGITIAGY 1n7fA 670 :IYTVELKRYGGPLGITISGT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 690 :EEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2366 Number of alignments=612 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)S3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 4 :ETFDVELTKNVQGLGITIAGY 1n7fA 669 :IIYTVELKRYGGPLGITISGT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 690 :EEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2368 Number of alignments=613 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)S3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 4 :ETFDVELTKNVQGLGITIAGY 1n7fA 669 :IIYTVELKRYGGPLGITISGT T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 690 :EEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2370 Number of alignments=614 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 5 :TFDVELTKNVQGLGITIAGYIG 1n7fA 670 :IYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2372 Number of alignments=615 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 5 :TFDVELTKNVQGLGITIAGYIG 1n7fA 670 :IYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2374 Number of alignments=616 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)S3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1n7fA 669 :IIYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2376 Number of alignments=617 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)S3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1n7fA 669 :IIYTVELKRYGGPLGITISGTEE T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 692 :PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2378 Number of alignments=618 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1n7fA 669 :IIYTVELKRYGGPLGITISGTEEP T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTL 1n7fA 693 :FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKI Number of specific fragments extracted= 2 number of extra gaps= 0 total=2380 Number of alignments=619 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1n7fA 669 :IIYTVELKRYGGPLGITISGTEEP T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 693 :FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2382 Number of alignments=620 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)S3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1n7fA 669 :IIYTVELKRYGGPLGITISGTEEP T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 693 :FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2384 Number of alignments=621 # 1n7fA read from 1n7fA/merged-local-a2m # found chain 1n7fA in training set Warning: unaligning (T0359)S3 because first residue in template chain is (1n7fA)A668 Warning: unaligning (T0359)R92 because last residue in template chain is (1n7fA)Q753 T0359 4 :ETFDVELTKNVQGLGITIAGYIGD 1n7fA 669 :IIYTVELKRYGGPLGITISGTEEP T0359 32 :PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 1n7fA 693 :FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2386 Number of alignments=622 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2f0aA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 2f0aA/merged-local-a2m # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0359 5 :TFDVELT 2f0aA 252 :IITVTLN T0359 12 :KN 2f0aA 260 :EK T0359 16 :GLGITIAGYIGDK 2f0aA 264 :FLGISIVGQSNER T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2391 Number of alignments=623 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0359 6 :FDVELT 2f0aA 253 :ITVTLN T0359 12 :KN 2f0aA 260 :EK T0359 16 :GLGITIAGYIGDK 2f0aA 264 :FLGISIVGQSNER T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2396 Number of alignments=624 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 T0359 5 :TFDVELTKNV 2f0aA 252 :IITVTLNMEK T0359 16 :GLGITIAGYIGDK 2f0aA 264 :FLGISIVGQSNER T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2400 Number of alignments=625 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 T0359 6 :FDVELTKNV 2f0aA 253 :ITVTLNMEK T0359 16 :GLGITIAGYIGDK 2f0aA 264 :FLGISIVGQSNER T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2404 Number of alignments=626 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0359 6 :FDVELTKN 2f0aA 254 :TVTLNMEK T0359 16 :GLGITIAGYIGD 2f0aA 264 :FLGISIVGQSNE T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 276 :RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI Number of specific fragments extracted= 3 number of extra gaps= 1 total=2407 Number of alignments=627 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0359 6 :FDVELTKN 2f0aA 254 :TVTLNMEK T0359 16 :GLGITIAGYIGD 2f0aA 264 :FLGISIVGQSNE T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLL 2f0aA 276 :RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDIVHKPGP Number of specific fragments extracted= 3 number of extra gaps= 1 total=2410 Number of alignments=628 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVELTKNV 2f0aA 252 :IITVTLNMEK T0359 16 :GLGITIAGYIG 2f0aA 264 :FLGISIVGQSN T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2414 Number of alignments=629 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 6 :FDVELTKNV 2f0aA 253 :ITVTLNMEK T0359 16 :GLGITIAGYIG 2f0aA 264 :FLGISIVGQSN T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2418 Number of alignments=630 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVELTKNV 2f0aA 252 :IITVTLNMEK T0359 16 :GLGITIAGYIG 2f0aA 264 :FLGISIVGQSN T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2422 Number of alignments=631 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVELT 2f0aA 252 :IITVTLN T0359 16 :GLGITIAGYIG 2f0aA 264 :FLGISIVGQSN T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2426 Number of alignments=632 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0359)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0359 5 :TFDVELTKNV 2f0aA 252 :IITVTLNMEK T0359 17 :LGITIAGYIG 2f0aA 265 :LGISIVGQSN T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMR 2f0aA 331 :PGPIVLTVAK Number of specific fragments extracted= 4 number of extra gaps= 1 total=2430 Number of alignments=633 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0359)G16 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 6 :FDVELTKNV 2f0aA 253 :ITVTLNMEK T0359 17 :LGITIAGYIG 2f0aA 265 :LGISIVGQSN T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2434 Number of alignments=634 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVELTKNV 2f0aA 252 :IITVTLNMEK T0359 16 :GLGITIAGYIG 2f0aA 264 :FLGISIVGQSN T0359 29 :KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 275 :ERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2438 Number of alignments=635 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVELT 2f0aA 252 :IITVTLN T0359 16 :GLGITIAGYIGDK 2f0aA 264 :FLGISIVGQSNER T0359 31 :EPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 277 :GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2442 Number of alignments=636 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0359 4 :ETFDVELTKN 2f0aA 252 :IITVTLNMEK T0359 16 :GLGITIAGYIGD 2f0aA 264 :FLGISIVGQSNE T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 276 :RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI Number of specific fragments extracted= 3 number of extra gaps= 1 total=2445 Number of alignments=637 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 T0359 5 :TFDVELTKN 2f0aA 253 :ITVTLNMEK T0359 16 :GLGITIAGYIGD 2f0aA 264 :FLGISIVGQSNE T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQT 2f0aA 276 :RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDIVHK Number of specific fragments extracted= 3 number of extra gaps= 1 total=2448 Number of alignments=638 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)V14 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (2f0aA)N263 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVEL 2f0aA 252 :IITVTL T0359 12 :KN 2f0aA 260 :EK T0359 16 :GLGITIAGYIGD 2f0aA 264 :FLGISIVGQSNE T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH 2f0aA 276 :RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRD T0359 81 :TGQTVLLTLMRR 2f0aA 330 :KPGPIVLTVAKL Number of specific fragments extracted= 5 number of extra gaps= 1 total=2453 Number of alignments=639 # 2f0aA read from 2f0aA/merged-local-a2m # found chain 2f0aA in template set Warning: unaligning (T0359)E4 because first residue in template chain is (2f0aA)M251 Warning: unaligning (T0359)Q15 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (2f0aA)N263 Warning: unaligning (T0359)G93 because last residue in template chain is (2f0aA)E342 T0359 5 :TFDVEL 2f0aA 252 :IITVTL T0359 16 :GLGITIAGYIGD 2f0aA 264 :FLGISIVGQSNE T0359 30 :LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 2f0aA 276 :RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDI T0359 82 :GQTVLLTLMRR 2f0aA 331 :PGPIVLTVAKL Number of specific fragments extracted= 4 number of extra gaps= 1 total=2457 Number of alignments=640 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1lcyA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1lcyA expands to /projects/compbio/data/pdb/1lcy.pdb.gz 1lcyA:# T0359 read from 1lcyA/merged-local-a2m # 1lcyA read from 1lcyA/merged-local-a2m # adding 1lcyA to template set # found chain 1lcyA in template set T0359 32 :PSGIFVKSITKSSAVEHDG 1lcyA 255 :QHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVE 1lcyA 274 :LRPGDVILAIGEQMVQNAEDVYEAV T0359 80 :HTGQTVLLTLMRRGET 1lcyA 299 :RTQSQLAVQIRRGRET Number of specific fragments extracted= 3 number of extra gaps= 0 total=2460 Number of alignments=641 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 28 :KKLEPSGIFVKSITKSSAVEHDG 1lcyA 251 :FPDVQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVE 1lcyA 274 :LRPGDVILAIGEQMVQNAEDVYEAV T0359 80 :HTGQTVLLTLMRRGET 1lcyA 299 :RTQSQLAVQIRRGRET Number of specific fragments extracted= 3 number of extra gaps= 0 total=2463 Number of alignments=642 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 15 :QGLGITIAGYIGD 1lcyA 242 :AELQLREPSFPDV T0359 32 :PSGIFVKSITKSSAVEHDG 1lcyA 255 :QHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQG 1lcyA 274 :LRPGDVILAIGEQMVQN T0359 71 :NQQAVEVL 1lcyA 291 :AEDVYEAV T0359 80 :HTGQTVLLTLMRRGET 1lcyA 299 :RTQSQLAVQIRRGRET Number of specific fragments extracted= 5 number of extra gaps= 0 total=2468 Number of alignments=643 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 14 :VQGLGITIAGYIGD 1lcyA 241 :LAELQLREPSFPDV T0359 32 :PSGIFVKSITKSSAVEHDG 1lcyA 255 :QHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQG 1lcyA 274 :LRPGDVILAIGEQMVQN T0359 71 :NQQAVEVL 1lcyA 291 :AEDVYEAV T0359 80 :HTGQTVLLTLMRRGET 1lcyA 299 :RTQSQLAVQIRRGRET Number of specific fragments extracted= 5 number of extra gaps= 0 total=2473 Number of alignments=644 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 14 :VQGLGITIAG 1lcyA 241 :LAELQLREPS T0359 28 :KKLEPSGIFVKSITKSSAVEHDG 1lcyA 251 :FPDVQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQG 1lcyA 274 :LRPGDVILAIGEQMVQN T0359 71 :NQQAVEVLR 1lcyA 291 :AEDVYEAVR T0359 81 :TGQTVLLTLMRRGET 1lcyA 300 :TQSQLAVQIRRGRET Number of specific fragments extracted= 5 number of extra gaps= 0 total=2478 Number of alignments=645 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 16 :GLGITIAG 1lcyA 243 :ELQLREPS T0359 28 :KKLEPSGIFVKSITKSSAVEHDG 1lcyA 251 :FPDVQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQG 1lcyA 274 :LRPGDVILAIGEQMVQN T0359 71 :NQQAVEVLR 1lcyA 291 :AEDVYEAVR T0359 81 :TGQTVLLTLMRRGET 1lcyA 300 :TQSQLAVQIRRGRET Number of specific fragments extracted= 5 number of extra gaps= 0 total=2483 Number of alignments=646 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 34 :GIFVKSITKSSAVEHDG 1lcyA 257 :GVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQGF 1lcyA 274 :LRPGDVILAIGEQMVQNA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2485 Number of alignments=647 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1lcyA 252 :PDVQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQGF 1lcyA 274 :LRPGDVILAIGEQMVQNA T0359 70 :TNQQAVEVLRHTGQTVLLT 1lcyA 300 :TQSQLAVQIRRGRETLTLY Number of specific fragments extracted= 3 number of extra gaps= 0 total=2488 Number of alignments=648 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 28 :KKLEPSGIFVKSITKSSAVEHDG 1lcyA 251 :FPDVQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQG 1lcyA 274 :LRPGDVILAIGEQMVQN T0359 71 :NQQAVEVLRHT 1lcyA 291 :AEDVYEAVRTQ T0359 83 :QTVLLTLMRRGE 1lcyA 302 :SQLAVQIRRGRE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2492 Number of alignments=649 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 26 :GDKKLEP 1lcyA 247 :REPSFPD T0359 33 :SGIFVKSITKSSAVEHDG 1lcyA 256 :HGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQG 1lcyA 274 :LRPGDVILAIGEQMVQN T0359 71 :NQQAVEVLRHTG 1lcyA 291 :AEDVYEAVRTQS T0359 84 :TVLLTLMRRGE 1lcyA 303 :QLAVQIRRGRE Number of specific fragments extracted= 5 number of extra gaps= 0 total=2497 Number of alignments=650 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 34 :GIFVKSITKSSAVEHDG 1lcyA 257 :GVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQGF 1lcyA 274 :LRPGDVILAIGEQMVQNA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2499 Number of alignments=651 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 30 :LEPSGIFVKSITKSSAVEHDG 1lcyA 253 :DVQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQGF 1lcyA 274 :LRPGDVILAIGEQMVQNA T0359 72 :QQAVEVLRH 1lcyA 292 :EDVYEAVRT Number of specific fragments extracted= 3 number of extra gaps= 0 total=2502 Number of alignments=652 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 27 :DKKL 1lcyA 248 :EPSF T0359 31 :EPSGIFVKSITKSSAVEHDG 1lcyA 254 :VQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQG 1lcyA 274 :LRPGDVILAIGEQMVQN T0359 71 :NQQAVEVLRHT 1lcyA 291 :AEDVYEAVRTQ T0359 83 :QTVLLTLMRRGET 1lcyA 302 :SQLAVQIRRGRET Number of specific fragments extracted= 5 number of extra gaps= 0 total=2507 Number of alignments=653 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 16 :GLGITIAG 1lcyA 228 :YIGVMMLT T0359 24 :YIGDKKL 1lcyA 245 :QLREPSF T0359 31 :EPSGIFVKSITKSSAVEHDG 1lcyA 254 :VQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQG 1lcyA 274 :LRPGDVILAIGEQMVQN T0359 71 :NQQAVEVLRHTGQ 1lcyA 291 :AEDVYEAVRTQSQ T0359 85 :VLLTLMRRGET 1lcyA 304 :LAVQIRRGRET Number of specific fragments extracted= 6 number of extra gaps= 0 total=2513 Number of alignments=654 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 28 :KKLEPSGIFVKSITKSSAVEHDG 1lcyA 251 :FPDVQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQGF 1lcyA 274 :LRPGDVILAIGEQMVQNA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2515 Number of alignments=655 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 27 :DKKLEPSGIFVKSITKSSAVEHDG 1lcyA 250 :SFPDVQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQGF 1lcyA 274 :LRPGDVILAIGEQMVQNA T0359 72 :QQAVEVL 1lcyA 292 :EDVYEAV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2518 Number of alignments=656 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 27 :DKKLEPSGIFVKSITKSSAVEHDG 1lcyA 250 :SFPDVQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQG 1lcyA 274 :LRPGDVILAIGEQMVQN T0359 71 :NQQAVEVLRHT 1lcyA 291 :AEDVYEAVRTQ T0359 83 :QTVLLTLMRRG 1lcyA 302 :SQLAVQIRRGR Number of specific fragments extracted= 4 number of extra gaps= 0 total=2522 Number of alignments=657 # 1lcyA read from 1lcyA/merged-local-a2m # found chain 1lcyA in template set T0359 27 :DK 1lcyA 250 :SF T0359 30 :LEPSGIFVKSITKSSAVEHDG 1lcyA 253 :DVQHGVLIHKVILGSPAHRAG T0359 52 :IQIGDQIIAVDGTNLQG 1lcyA 274 :LRPGDVILAIGEQMVQN T0359 71 :NQQAVEVLRHTG 1lcyA 291 :AEDVYEAVRTQS T0359 84 :TVLLTLMRRGE 1lcyA 303 :QLAVQIRRGRE Number of specific fragments extracted= 5 number of extra gaps= 0 total=2527 Number of alignments=658 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1sotA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1sotA expands to /projects/compbio/data/pdb/1sot.pdb.gz 1sotA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0359 read from 1sotA/merged-local-a2m # 1sotA read from 1sotA/merged-local-a2m # adding 1sotA to template set # found chain 1sotA in template set Warning: unaligning (T0359)A22 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)G281 Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)L89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0359 17 :LGITI 1sotA 259 :IGIGG T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLT 1sotA 298 :IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2530 Number of alignments=659 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)L89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLT 1sotA 298 :IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 2 number of extra gaps= 0 total=2532 Number of alignments=660 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)A22 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)G281 Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)L89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0359)T95 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0359 17 :LGITI 1sotA 259 :IGIGG T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLT 1sotA 298 :IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2535 Number of alignments=661 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)L30 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)G281 Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)L89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0359)T95 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0359 15 :QGLGITIAGYIGDKK 1sotA 249 :IRDGRVIRGYIGIGG T0359 35 :IFVKSITKSSAVEHD 1sotA 282 :IVVNEVSPDGPAANA T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLT 1sotA 297 :GIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2538 Number of alignments=662 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQGF 1sotA 298 :IQVNDLIISVDNKPAISA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2540 Number of alignments=663 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)L89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQGF 1sotA 298 :IQVNDLIISVDNKPAISA T0359 72 :QQAVEVLRHT 1sotA 316 :LETMDQVAEI T0359 82 :GQTVLLT 1sotA 328 :GSVIPVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2544 Number of alignments=664 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)L89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQG 1sotA 298 :IQVNDLIISVDNKPAIS T0359 71 :NQQAVEVLRHT 1sotA 315 :ALETMDQVAEI T0359 82 :GQTVLLT 1sotA 328 :GSVIPVV T0359 95 :T 1sotA 342 :L Number of specific fragments extracted= 5 number of extra gaps= 0 total=2549 Number of alignments=665 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQG 1sotA 298 :IQVNDLIISVDNKPAIS T0359 71 :NQQAVEVLRHT 1sotA 315 :ALETMDQVAEI T0359 82 :GQTVLL 1sotA 328 :GSVIPV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2553 Number of alignments=666 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQGF 1sotA 298 :IQVNDLIISVDNKPAISA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2555 Number of alignments=667 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)L89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQGF 1sotA 298 :IQVNDLIISVDNKPAISA T0359 72 :QQAVEVLRHT 1sotA 316 :LETMDQVAEI T0359 82 :GQTVLLT 1sotA 328 :GSVIPVV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2559 Number of alignments=668 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)L89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0359)T95 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQ 1sotA 298 :IQVNDLIISVDNKPAI T0359 70 :TNQQAVEVLRHT 1sotA 314 :SALETMDQVAEI T0359 82 :GQTVLLT 1sotA 328 :GSVIPVV T0359 96 :S 1sotA 342 :L Number of specific fragments extracted= 5 number of extra gaps= 0 total=2564 Number of alignments=669 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)L89 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0359)T95 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQ 1sotA 298 :IQVNDLIISVDNKPAI T0359 70 :TNQQAVEVLRHT 1sotA 314 :SALETMDQVAEI T0359 82 :GQTVLLT 1sotA 328 :GSVIPVV T0359 96 :S 1sotA 342 :L Number of specific fragments extracted= 5 number of extra gaps= 0 total=2569 Number of alignments=670 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTN 1sotA 298 :IQVNDLIISVDNKP Number of specific fragments extracted= 2 number of extra gaps= 0 total=2571 Number of alignments=671 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQGF 1sotA 298 :IQVNDLIISVDNKPAISA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2573 Number of alignments=672 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)R91 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 Warning: unaligning (T0359)V97 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)Q341 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQG 1sotA 298 :IQVNDLIISVDNKPAIS T0359 71 :NQQAVEVLRHTGQTVLLTLM 1sotA 315 :ALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2576 Number of alignments=673 # 1sotA read from 1sotA/merged-local-a2m # found chain 1sotA in template set Warning: unaligning (T0359)G34 because of BadResidue code CHAIN_BREAK_BEFORE+BAD_PEPTIDE at template residue (1sotA)G281 Warning: unaligning (T0359)R91 because of BadResidue code TOO_FEW_ATOMS+CHAIN_BREAK_BEFORE+BAD_PEPTIDE in next template residue (1sotA)Q341 T0359 35 :IFVKSITKSSAVEHDG 1sotA 282 :IVVNEVSPDGPAANAG T0359 52 :IQIGDQIIAVDGTNLQ 1sotA 298 :IQVNDLIISVDNKPAI T0359 70 :TNQQAVEVLRHTGQTVLLTLM 1sotA 314 :SALETMDQVAEIRPGSVIPVV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2579 Number of alignments=674 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1g9oA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 1g9oA/merged-local-a2m # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2582 Number of alignments=675 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETD Number of specific fragments extracted= 3 number of extra gaps= 0 total=2585 Number of alignments=676 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 4 :ETFDVELTKNVQGLGITIAGYI 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEK T0359 31 :EPSGIFVKSITKSSAVEHDG 1g9oA 33 :GKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET Number of specific fragments extracted= 3 number of extra gaps= 0 total=2588 Number of alignments=677 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 4 :ETFDVELTKNVQGLGITIAGYI 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEK T0359 31 :EPSGIFVKSITKSSAVEHDG 1g9oA 33 :GKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET Number of specific fragments extracted= 3 number of extra gaps= 0 total=2591 Number of alignments=678 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 1g9oA 11 :LPRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET Number of specific fragments extracted= 3 number of extra gaps= 0 total=2594 Number of alignments=679 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 5 :TFDVELTKNVQGLGITIAGYIG 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET Number of specific fragments extracted= 3 number of extra gaps= 0 total=2597 Number of alignments=680 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 4 :ETFDVELTKNVQGLGITIAG 1g9oA 11 :LPRLCCLEKGPNGYGFHLHG T0359 30 :LEPSGIFVKSITKSSAVEHD 1g9oA 32 :KGKLGQYIRLVEPGSPAEKA T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1g9oA 52 :GLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2600 Number of alignments=681 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 5 :TFDVELTKNVQGLGITIAG 1g9oA 12 :PRLCCLEKGPNGYGFHLHG T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1g9oA 31 :EKGKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2603 Number of alignments=682 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 5 :TFDVELTKNVQGLGITIAG 1g9oA 12 :PRLCCLEKGPNGYGFHLHG T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1g9oA 31 :EKGKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET Number of specific fragments extracted= 3 number of extra gaps= 0 total=2606 Number of alignments=683 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1g9oA)R9 T0359 3 :SETFDVELTKNVQGLGITIAG 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHG T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1g9oA 31 :EKGKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET T0359 95 :TSV 1g9oA 97 :EQL Number of specific fragments extracted= 4 number of extra gaps= 0 total=2610 Number of alignments=684 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1g9oA)R9 T0359 3 :SETFDVELTKNVQGLGITIAGY 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGE T0359 30 :LEPSGIFVKSITKSSAVEHDG 1g9oA 32 :KGKLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET T0359 95 :TSV 1g9oA 97 :EQL Number of specific fragments extracted= 4 number of extra gaps= 0 total=2614 Number of alignments=685 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 5 :TFDVELTKNVQGLGITIAGYIG 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETD Number of specific fragments extracted= 3 number of extra gaps= 0 total=2617 Number of alignments=686 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 5 :TFDVELTKNVQGLGITIAGYIG 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET Number of specific fragments extracted= 3 number of extra gaps= 0 total=2620 Number of alignments=687 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETS 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2623 Number of alignments=688 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2626 Number of alignments=689 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKGK T0359 33 :SGIFVKSITKSSAVEHDG 1g9oA 35 :LGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET Number of specific fragments extracted= 3 number of extra gaps= 0 total=2629 Number of alignments=690 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 5 :TFDVELTKNVQGLGITIAGYIGD 1g9oA 12 :PRLCCLEKGPNGYGFHLHGEKGK T0359 33 :SGIFVKSITKSSAVEHDG 1g9oA 35 :LGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPET Number of specific fragments extracted= 3 number of extra gaps= 0 total=2632 Number of alignments=691 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set Warning: unaligning (T0359)M2 because first residue in template chain is (1g9oA)R9 T0359 3 :SETFDVELTKNVQGLGITIAGYIG 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKG T0359 32 :PSGIFVKSITKSSAVEHDG 1g9oA 34 :KLGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2635 Number of alignments=692 # 1g9oA read from 1g9oA/merged-local-a2m # found chain 1g9oA in training set T0359 3 :SETFDVELTKNVQGLGITIAGYIGD 1g9oA 10 :MLPRLCCLEKGPNGYGFHLHGEKGK T0359 33 :SGIFVKSITKSSAVEHDG 1g9oA 35 :LGQYIRLVEPGSPAEKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGETSV 1g9oA 53 :LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2638 Number of alignments=693 # Reading fragments from alignment file # Attempting to read fragment alignments from file 2h3lA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments # T0359 read from 2h3lA/merged-local-a2m # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 T0359 2 :MSETFDVELTKNV 2h3lA 1318 :AKQEIRVRVEKDP T0359 16 :GLGITIAGYIGDKKL 2h3lA 1331 :ELGFSISGGVGGRGN T0359 31 :EPSGIFVKSITKSSAV 2h3lA 1350 :DDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1366 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 1 total=2642 Number of alignments=694 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set T0359 3 :SETFDVELTKNV 2h3lA 1319 :KQEIRVRVEKDP T0359 16 :GLGITIAGYIGDKK 2h3lA 1331 :ELGFSISGGVGGRG T0359 30 :LEPSGIFVKSITKSSAV 2h3lA 1349 :PDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1366 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2646 Number of alignments=695 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 T0359 2 :MSETFDVELTKNV 2h3lA 1318 :AKQEIRVRVEKDP T0359 16 :GLGITIAGYIGDKKL 2h3lA 1331 :ELGFSISGGVGGRGN T0359 31 :EPSGIFVKSITKSSAVE 2h3lA 1350 :DDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1367 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 1 total=2650 Number of alignments=696 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set T0359 3 :SETFDVELTKNV 2h3lA 1319 :KQEIRVRVEKDP T0359 16 :GLGITIAGYIGDK 2h3lA 1331 :ELGFSISGGVGGR T0359 29 :KLEPSGIFVKSITKSSAVE 2h3lA 1348 :RPDDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1367 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2654 Number of alignments=697 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 2h3lA 1319 :KQEIRVRVEKDPELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2h3lA 1366 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVRE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2657 Number of alignments=698 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set T0359 4 :ETFDVELTKNVQGLGITIAGYIG 2h3lA 1319 :KQEIRVRVEKDPELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2h3lA 1366 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVRE Number of specific fragments extracted= 3 number of extra gaps= 0 total=2660 Number of alignments=699 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 T0359 11 :TKNVQGLGITIAGYIG 2h3lA 1326 :VEKDPELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1366 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 3 number of extra gaps= 1 total=2663 Number of alignments=700 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set T0359 6 :FDVELTKNV 2h3lA 1322 :IRVRVEKDP T0359 16 :GLGITIAGYIG 2h3lA 1331 :ELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1367 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2667 Number of alignments=701 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 T0359 4 :ETFDVELTKNV 2h3lA 1320 :QEIRVRVEKDP T0359 16 :GLGITIAGYIG 2h3lA 1331 :ELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVEH 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPASK T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1368 :LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 1 total=2671 Number of alignments=702 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 T0359 5 :TFDVELTKNV 2h3lA 1321 :EIRVRVEKDP T0359 16 :GLGITIAGYIG 2h3lA 1331 :ELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVEH 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPASK T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1368 :LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 1 total=2675 Number of alignments=703 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set T0359 11 :TKNVQGLGITIAGYI 2h3lA 1326 :VEKDPELGFSISGGV T0359 26 :GDKKLEPSGIFVKSITKSSAVE 2h3lA 1345 :NPFRPDDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1367 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 3 number of extra gaps= 0 total=2678 Number of alignments=704 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set T0359 6 :FDVELTKN 2h3lA 1322 :IRVRVEKD T0359 15 :QGLGITIAGYIGDKKL 2h3lA 1330 :PELGFSISGGVGGRGN T0359 31 :EPSGIFVKSITKSSAVEH 2h3lA 1350 :DDDGIFVTRVQPEGPASK T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1368 :LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 0 total=2682 Number of alignments=705 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 Warning: unaligning (T0359)T95 because of BadResidue code HAS_OXT+BAD_PEPTIDE at template residue (2h3lA)S1412 T0359 3 :SETFDVELTKNV 2h3lA 1319 :KQEIRVRVEKDP T0359 16 :GLGITIAGYIGDKKL 2h3lA 1331 :ELGFSISGGVGGRGN T0359 31 :EPSGIFVKSITKSSAVEH 2h3lA 1350 :DDDGIFVTRVQPEGPASK T0359 51 :RIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1368 :LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 1 total=2686 Number of alignments=706 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 T0359 4 :ETFDVELTKNV 2h3lA 1320 :QEIRVRVEKDP T0359 16 :GLGITIAGYIGDKKL 2h3lA 1331 :ELGFSISGGVGGRGN T0359 31 :EPSGIFVKSITKSSAVE 2h3lA 1350 :DDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1367 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 1 total=2690 Number of alignments=707 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set T0359 7 :DVELTKNVQGLGITIAGYIG 2h3lA 1322 :IRVRVEKDPELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 2h3lA 1367 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2693 Number of alignments=708 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set T0359 7 :DVELTKNVQGLGITIAGYIG 2h3lA 1322 :IRVRVEKDPELGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAVE 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPAS T0359 50 :GRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMR 2h3lA 1367 :KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR Number of specific fragments extracted= 3 number of extra gaps= 0 total=2696 Number of alignments=709 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set Warning: unaligning (T0359)E94 because of BadResidue code HAS_OXT+BAD_PEPTIDE in next template residue (2h3lA)S1412 T0359 1 :SMSETFDVELTKNVQ 2h3lA 1317 :LAKQEIRVRVEKDPE T0359 17 :LGITIAGYIG 2h3lA 1332 :LGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 2h3lA 1366 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV Number of specific fragments extracted= 4 number of extra gaps= 1 total=2700 Number of alignments=710 # 2h3lA read from 2h3lA/merged-local-a2m # found chain 2h3lA in template set T0359 2 :MSETFDVELTKNVQ 2h3lA 1318 :AKQEIRVRVEKDPE T0359 17 :LGITIAGYIG 2h3lA 1332 :LGFSISGGVG T0359 27 :DKKLEPSGIFVKSITKSSAV 2h3lA 1346 :PFRPDDDGIFVTRVQPEGPA T0359 49 :DGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 2h3lA 1366 :SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVRE Number of specific fragments extracted= 4 number of extra gaps= 0 total=2704 Number of alignments=711 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1y8tA/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1y8tA expands to /projects/compbio/data/pdb/1y8t.pdb.gz 1y8tA:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0359 read from 1y8tA/merged-local-a2m # 1y8tA read from 1y8tA/merged-local-a2m # adding 1y8tA to template set # found chain 1y8tA in template set Warning: unaligning (T0359)L17 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)G224 Warning: unaligning (T0359)G18 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)G224 Warning: unaligning (T0359)I19 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0359)T20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0359)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0359)E31 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)S33 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 8 :VELTKNVQG 1y8tA 214 :KRIADELIS T0359 22 :AGYIGDKKL 1y8tA 228 :HASLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 93 :GET 1y8tA 302 :GGS Number of specific fragments extracted= 8 number of extra gaps= 8 total=2712 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)L17 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)G224 Warning: unaligning (T0359)G18 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)G224 Warning: unaligning (T0359)I19 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0359)T20 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0359)I21 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0359)E31 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)P32 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)S33 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 12 :KNVQG 1y8tA 218 :DELIS T0359 22 :AGYIGDKKL 1y8tA 228 :HASLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 93 :GE 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 8 total=2720 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)I25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)G26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)K28 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 17 :LGITIA 1y8tA 231 :LGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 93 :GET 1y8tA 302 :GGS Number of specific fragments extracted= 7 number of extra gaps= 7 total=2727 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)L17 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)G224 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 15 :QG 1y8tA 221 :IS T0359 18 :GITI 1y8tA 232 :GVQV T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 93 :GET 1y8tA 302 :GGS Number of specific fragments extracted= 8 number of extra gaps= 7 total=2735 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G18 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)I19 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)T20 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)I21 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)A22 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 13 :NVQGL 1y8tA 232 :GVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTL 1y8tA 290 :GATVALTF T0359 93 :GET 1y8tA 302 :GGS Number of specific fragments extracted= 7 number of extra gaps= 6 total=2742 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)R51 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)M90 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTL 1y8tA 290 :GATVALTF T0359 93 :GET 1y8tA 302 :GGS Number of specific fragments extracted= 6 number of extra gaps= 5 total=2748 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)K29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)L30 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)E31 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)P32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)G93 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 16 :GLGITIA 1y8tA 230 :SLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 94 :E 1y8tA 302 :G Number of specific fragments extracted= 7 number of extra gaps= 6 total=2755 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)L30 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)E31 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)P32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)G93 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 14 :VQGLGITIA 1y8tA 228 :HASLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 94 :E 1y8tA 302 :G Number of specific fragments extracted= 7 number of extra gaps= 6 total=2762 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)K29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)L30 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)E31 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)P32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)G93 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 17 :LGITIA 1y8tA 231 :LGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQ 1y8tA 274 :IN T0359 70 :TNQQAVEVLRHT 1y8tA 276 :SADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 94 :ET 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 5 total=2770 Number of alignments=712 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)K29 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)L30 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)E31 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)P32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)G93 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 16 :GLGITIA 1y8tA 230 :SLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQG 1y8tA 274 :INS T0359 71 :NQQAVEVLRHT 1y8tA 277 :ADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 94 :E 1y8tA 302 :G Number of specific fragments extracted= 8 number of extra gaps= 5 total=2778 Number of alignments=713 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)I25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)G26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)P32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 T0359 16 :GLGITIA 1y8tA 230 :SLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 6 total=2784 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)I25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)G26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)P32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 T0359 14 :VQGLGITIA 1y8tA 228 :HASLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 6 total=2790 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)I25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)G26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)P32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)G93 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 16 :GLGITIA 1y8tA 230 :SLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQ 1y8tA 274 :IN T0359 70 :TNQQAVEVLRHT 1y8tA 276 :SADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 94 :ETS 1y8tA 302 :GGS Number of specific fragments extracted= 8 number of extra gaps= 5 total=2798 Number of alignments=714 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)I25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)G26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)P32 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)G93 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 16 :GLGITIA 1y8tA 230 :SLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQG 1y8tA 274 :INS T0359 71 :NQQAVEVLRHT 1y8tA 277 :ADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 94 :ETS 1y8tA 302 :GGS Number of specific fragments extracted= 8 number of extra gaps= 5 total=2806 Number of alignments=715 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)T11 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0359)K12 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0359)N13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)I25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)G26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)G93 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 14 :VQGLGITIA 1y8tA 228 :HASLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 94 :E 1y8tA 302 :G Number of specific fragments extracted= 7 number of extra gaps= 7 total=2813 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)L10 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)G224 Warning: unaligning (T0359)T11 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)K225 Warning: unaligning (T0359)K12 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)S227 Warning: unaligning (T0359)N13 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)S227 Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)I25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)G26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 T0359 14 :VQGLGITIA 1y8tA 228 :HASLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGFTNQQAVEVLR 1y8tA 274 :INSADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ Number of specific fragments extracted= 6 number of extra gaps= 7 total=2819 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)I25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)G26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)H80 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P289 Warning: unaligning (T0359)T81 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P289 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)G93 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 16 :GLGITIA 1y8tA 230 :SLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQGF 1y8tA 274 :INSA T0359 72 :QQAVEVLR 1y8tA 278 :DALVAAVR T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 94 :ET 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 6 total=2827 Number of alignments=716 # 1y8tA read from 1y8tA/merged-local-a2m # found chain 1y8tA in template set Warning: unaligning (T0359)G23 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)D238 Warning: unaligning (T0359)Y24 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)D238 Warning: unaligning (T0359)I25 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)D240 Warning: unaligning (T0359)G26 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)D240 Warning: unaligning (T0359)D27 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)T241 Warning: unaligning (T0359)S33 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)L242 Warning: unaligning (T0359)S44 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A254 Warning: unaligning (T0359)A45 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A254 Warning: unaligning (T0359)H48 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)A258 Warning: unaligning (T0359)D49 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)A258 Warning: unaligning (T0359)G50 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE in next template residue (1y8tA)V260 Warning: unaligning (T0359)I52 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)V260 Warning: unaligning (T0359)G63 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE in next template residue (1y8tA)R272 Warning: unaligning (T0359)T64 because of BadResidue code TOO_FEW_ATOMS+BAD_PEPTIDE at template residue (1y8tA)R272 Warning: unaligning (T0359)N65 because of BadResidue code NON_PLANAR_PEPTIDE+BAD_PEPTIDE at template residue (1y8tA)P273 Warning: unaligning (T0359)R91 because of BadResidue code BAD_PEPTIDE in next template residue (1y8tA)P300 Warning: unaligning (T0359)R92 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)P300 Warning: unaligning (T0359)G93 because of BadResidue code BAD_PEPTIDE at template residue (1y8tA)S301 T0359 16 :GLGITIA 1y8tA 230 :SLGVQVT T0359 34 :GIFVKSITKS 1y8tA 243 :GAKIVEVVAG T0359 46 :VE 1y8tA 255 :AA T0359 53 :QIGDQIIAVD 1y8tA 261 :PKGVVVTKVD T0359 66 :LQG 1y8tA 274 :INS T0359 71 :NQQAVEVLRHT 1y8tA 277 :ADALVAAVRSK T0359 82 :GQTVLLTLM 1y8tA 290 :GATVALTFQ T0359 94 :ET 1y8tA 302 :GG Number of specific fragments extracted= 8 number of extra gaps= 5 total=2835 Number of alignments=717 # Reading fragments from alignment file # Attempting to read fragment alignments from file 1ky9A/merged-local-a2m with NO bystroff filtering # adding to alignment library if long or multiple fragments 1ky9A expands to /projects/compbio/data/pdb/1ky9.pdb.gz 1ky9A:Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M Bad short name: MSE for alphabet: ExtAA Replacing MSE with M # T0359 read from 1ky9A/merged-local-a2m # 1ky9A read from 1ky9A/merged-local-a2m # adding 1ky9A to template set # found chain 1ky9A in template set Warning: unaligning (T0359)T11 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9A)I267 Warning: unaligning (T0359)K12 because of BadResidue code BAD_PEPTIDE at template residue (1ky9A)I267 T0359 8 :VEL 1ky9A 263 :GEL T0359 13 :NVQGLGITIAGYIGDK 1ky9A 268 :MGTELNSELAKAMKVD T0359 31 :EPSGIFVKSITKSSAVEHDG 1ky9A 284 :AQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=2839 Number of alignments=718 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set Warning: unaligning (T0359)T11 because of BadResidue code BAD_PEPTIDE in next template residue (1ky9A)I267 Warning: unaligning (T0359)K12 because of BadResidue code BAD_PEPTIDE at template residue (1ky9A)I267 T0359 9 :EL 1ky9A 264 :EL T0359 13 :NVQGLGITIAGYIGDK 1ky9A 268 :MGTELNSELAKAMKVD T0359 31 :EPSGIFVKSITKSSAVEHDG 1ky9A 284 :AQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGET 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQ Number of specific fragments extracted= 4 number of extra gaps= 1 total=2843 Number of alignments=719 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 34 :GIFVKSITKSSAVEHDG 1ky9A 287 :GAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2845 Number of alignments=720 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 33 :SGIFVKSITKSSAVEHDG 1ky9A 286 :RGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2847 Number of alignments=721 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 31 :EPSGIFVKSITKSSAVEHDG 1ky9A 284 :AQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGF 1ky9A 304 :IKAGDVITSLNGKPISSF T0359 76 :EVLRHT 1ky9A 322 :AALRAQ T0359 82 :GQTVLLTLMRRGE 1ky9A 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 4 number of extra gaps= 0 total=2851 Number of alignments=722 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 32 :PSGIFVKSITKSSAVEHDG 1ky9A 285 :QRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGF 1ky9A 304 :IKAGDVITSLNGKPISSF T0359 72 :QQAVEVLRHT 1ky9A 322 :AALRAQVGTM T0359 82 :GQTVLLTLMRRGE 1ky9A 334 :GSKLTLGLLRDGK T0359 95 :TS 1ky9A 350 :VN Number of specific fragments extracted= 5 number of extra gaps= 0 total=2856 Number of alignments=723 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 34 :GIFVKSITKSSAVEHDG 1ky9A 287 :GAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2858 Number of alignments=724 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 34 :GIFVKSITKSSAVEHDG 1ky9A 287 :GAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRGE 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGK Number of specific fragments extracted= 2 number of extra gaps= 0 total=2860 Number of alignments=725 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 26 :G 1ky9A 283 :D T0359 31 :EPSGIFVKSITKSSAVEHDG 1ky9A 284 :AQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGF 1ky9A 304 :IKAGDVITSLNGKPISSF T0359 72 :QQAVEVLRHT 1ky9A 322 :AALRAQVGTM T0359 82 :GQTVLLTLMRRGET 1ky9A 334 :GSKLTLGLLRDGKQ Number of specific fragments extracted= 5 number of extra gaps= 0 total=2865 Number of alignments=726 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 26 :G 1ky9A 283 :D T0359 31 :EPSGIFVKSITKSSAVEHDG 1ky9A 284 :AQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGF 1ky9A 304 :IKAGDVITSLNGKPISSF T0359 72 :QQAVEVLRHT 1ky9A 322 :AALRAQVGTM T0359 82 :GQTVLLTLMRRGE 1ky9A 334 :GSKLTLGLLRDGK Number of specific fragments extracted= 5 number of extra gaps= 0 total=2870 Number of alignments=727 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 34 :GIFVKSITKSSAVEHDG 1ky9A 287 :GAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQAV 1ky9A 304 :IKAGDVITSLNGKPISSFAALRAQ Number of specific fragments extracted= 2 number of extra gaps= 0 total=2872 Number of alignments=728 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 32 :PSGIFVKSITKSSAVEHDG 1ky9A 285 :QRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGFTNQQA 1ky9A 304 :IKAGDVITSLNGKPISSFAALRA Number of specific fragments extracted= 2 number of extra gaps= 0 total=2874 Number of alignments=729 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 29 :KLEPSGIFVKSITKSSAVEHDG 1ky9A 282 :VDAQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGF 1ky9A 304 :IKAGDVITSLNGKPISSF T0359 76 :EVLRHT 1ky9A 322 :AALRAQ Number of specific fragments extracted= 3 number of extra gaps= 0 total=2877 Number of alignments=730 # 1ky9A read from 1ky9A/merged-local-a2m # found chain 1ky9A in template set T0359 30 :LEPSGIFVKSITKSSAVEHDG 1ky9A 283 :DAQRGAFVSQVLPNSSAAKAG T0359 52 :IQIGDQIIAVDGTNLQGF 1ky9A 304 :IKAGDVITSLNGKPISSF T0359 72 :QQAVEVLRHT 1ky9A 322 :AALRAQVGTM T0359 82 :GQTVLLTLMRRG 1ky9A 334 :GSKLTLGLLRDG Number of specific fragments extracted= 4 number of extra gaps= 0 total=2881 Number of alignments=731 # command:NUMB_ALIGNS: 731 evalue: 0 0.0000, weight 33.8074 evalue: 1 0.0000, weight 33.5422 evalue: 2 0.0000, weight 33.1905 evalue: 3 0.0000, weight 32.8332 evalue: 4 0.0000, weight 31.9722 evalue: 5 0.0000, weight 31.6457 evalue: 6 0.0000, weight 30.1277 evalue: 7 0.0000, weight 28.4435 evalue: 8 0.0000, weight 26.9691 evalue: 9 0.0000, weight 26.5521 evalue: 10 0.0000, weight 35.3042 evalue: 11 0.0000, weight 34.7340 evalue: 12 0.0000, weight 33.4431 evalue: 13 0.0000, weight 33.3576 evalue: 14 0.0000, weight 32.5123 evalue: 15 0.0000, weight 31.2586 evalue: 16 0.0000, weight 29.1897 evalue: 17 0.0000, weight 27.9704 evalue: 18 0.0000, weight 27.7987 evalue: 19 0.0000, weight 26.3973 evalue: 20 0.0000, weight 36.8111 evalue: 21 0.0000, weight 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0.0000, weight 29.0842 evalue: 711 0.0003, weight 8.6467 evalue: 712 0.0003, weight 8.6467 evalue: 713 0.0003, weight 8.6467 evalue: 714 0.0003, weight 8.6467 evalue: 715 0.0003, weight 8.6467 evalue: 716 0.0003, weight 8.6467 evalue: 717 0.1156, weight 2.7642 evalue: 718 0.1156, weight 2.7642 evalue: 719 0.1156, weight 2.7642 evalue: 720 0.1156, weight 2.7642 evalue: 721 0.1156, weight 2.7642 evalue: 722 0.1156, weight 2.7642 evalue: 723 0.1156, weight 2.7642 evalue: 724 0.1156, weight 2.7642 evalue: 725 0.1156, weight 2.7642 evalue: 726 0.1156, weight 2.7642 evalue: 727 0.1156, weight 2.7642 evalue: 728 0.1156, weight 2.7642 evalue: 729 0.1156, weight 2.7642 evalue: 730 0.1156, weight 2.7642 RES2ATOM 0 2 RES2ATOM 1 8 RES2ATOM 2 16 RES2ATOM 3 22 RES2ATOM 4 31 RES2ATOM 5 38 RES2ATOM 6 49 RES2ATOM 7 57 RES2ATOM 8 64 RES2ATOM 9 73 RES2ATOM 10 81 RES2ATOM 11 88 RES2ATOM 12 97 RES2ATOM 13 105 RES2ATOM 14 112 RES2ATOM 16 125 RES2ATOM 18 137 RES2ATOM 19 145 RES2ATOM 20 152 RES2ATOM 21 160 RES2ATOM 23 169 RES2ATOM 24 181 RES2ATOM 26 193 RES2ATOM 27 201 RES2ATOM 28 210 RES2ATOM 29 219 RES2ATOM 30 227 RES2ATOM 31 236 RES2ATOM 32 243 RES2ATOM 34 253 RES2ATOM 35 261 RES2ATOM 36 272 RES2ATOM 37 279 RES2ATOM 38 288 RES2ATOM 39 294 RES2ATOM 40 302 RES2ATOM 41 309 RES2ATOM 42 318 RES2ATOM 43 324 RES2ATOM 44 330 RES2ATOM 45 335 RES2ATOM 46 342 RES2ATOM 47 351 RES2ATOM 48 361 RES2ATOM 50 373 RES2ATOM 51 384 RES2ATOM 52 392 RES2ATOM 53 401 RES2ATOM 55 413 RES2ATOM 56 421 RES2ATOM 57 430 RES2ATOM 58 438 RES2ATOM 59 446 RES2ATOM 60 451 RES2ATOM 61 458 RES2ATOM 63 470 RES2ATOM 64 477 RES2ATOM 65 485 RES2ATOM 66 493 RES2ATOM 68 506 RES2ATOM 69 517 RES2ATOM 70 524 RES2ATOM 71 532 RES2ATOM 72 541 RES2ATOM 73 550 RES2ATOM 74 555 RES2ATOM 75 562 RES2ATOM 76 571 RES2ATOM 77 578 RES2ATOM 78 586 RES2ATOM 79 597 RES2ATOM 80 607 RES2ATOM 82 618 RES2ATOM 83 627 RES2ATOM 84 634 RES2ATOM 85 641 RES2ATOM 86 649 RES2ATOM 87 657 RES2ATOM 88 664 RES2ATOM 89 672 RES2ATOM 90 680 RES2ATOM 91 691 RES2ATOM 93 706 RES2ATOM 94 715 RES2ATOM 95 722 RES2ATOM 96 728 Constraint 295 402 5.1170 6.3963 12.7925 1163.5295 Constraint 273 402 4.4415 5.5519 11.1038 1163.5295 Constraint 273 431 5.4421 6.8026 13.6053 1159.4479 Constraint 273 393 5.4997 6.8746 13.7491 1158.6317 Constraint 295 385 4.6682 5.8352 11.6704 1158.4607 Constraint 273 385 4.8228 6.0285 12.0571 1157.6682 Constraint 273 414 3.6908 4.6135 9.2269 1156.5027 Constraint 262 422 4.3631 5.4538 10.9077 1153.7679 Constraint 262 431 5.7913 7.2391 14.4781 1146.8024 Constraint 289 402 4.9779 6.2223 12.4446 1141.3429 Constraint 280 402 4.9796 6.2245 12.4491 1140.6244 Constraint 452 579 4.9996 6.2495 12.4990 1139.8412 Constraint 452 572 4.2187 5.2734 10.5467 1137.1385 Constraint 262 414 5.4321 6.7901 13.5803 1135.0675 Constraint 471 572 4.7156 5.8945 11.7889 1132.1263 Constraint 161 262 4.4077 5.5096 11.0193 1122.0422 Constraint 153 273 4.9565 6.1956 12.3912 1121.8739 Constraint 153 262 5.3460 6.6824 13.3649 1121.6855 Constraint 254 431 3.7971 4.7463 9.4927 1121.1215 Constraint 153 280 5.1873 6.4841 12.9681 1120.5214 Constraint 161 280 3.6090 4.5113 9.0226 1120.4739 Constraint 153 431 5.5165 6.8957 13.7913 1120.0437 Constraint 431 665 4.6424 5.8030 11.6061 1116.4795 Constraint 459 642 4.4067 5.5084 11.0168 1114.7583 Constraint 138 273 4.3837 5.4797 10.9594 1114.6060 Constraint 146 280 4.0124 5.0155 10.0309 1112.8492 Constraint 146 273 5.8349 7.2936 14.5872 1112.0596 Constraint 138 295 4.1942 5.2427 10.4854 1112.0596 Constraint 138 303 5.5455 6.9319 13.8638 1111.7303 Constraint 146 289 3.6217 4.5272 9.0544 1110.3029 Constraint 439 673 4.5390 5.6737 11.3475 1109.7190 Constraint 138 385 5.0280 6.2850 12.5700 1106.1982 Constraint 459 635 5.1454 6.4318 12.8636 1105.7501 Constraint 439 665 5.1420 6.4276 12.8551 1102.3461 Constraint 254 422 5.4382 6.7977 13.5954 1100.6991 Constraint 126 336 4.4569 5.5711 11.1422 1098.5677 Constraint 254 486 4.3247 5.4059 10.8118 1098.0781 Constraint 138 336 3.5985 4.4981 8.9961 1097.1814 Constraint 254 551 4.0557 5.0696 10.1393 1094.8901 Constraint 126 331 4.3710 5.4638 10.9276 1092.2289 Constraint 161 254 5.9485 7.4357 14.8713 1084.5140 Constraint 422 673 3.7144 4.6430 9.2861 1083.0369 Constraint 153 254 4.2779 5.3474 10.6948 1082.8048 Constraint 422 665 5.0719 6.3399 12.6798 1079.2078 Constraint 452 635 5.2313 6.5391 13.0783 1070.6028 Constraint 414 665 3.4909 4.3636 8.7273 1070.5416 Constraint 138 325 5.7059 7.1324 14.2647 1070.2394 Constraint 254 525 5.4048 6.7559 13.5119 1070.0172 Constraint 431 551 5.6291 7.0364 14.0728 1062.1979 Constraint 414 673 5.4353 6.7942 13.5883 1059.1010 Constraint 385 665 5.5142 6.8928 13.7855 1053.3314 Constraint 459 608 4.7860 5.9825 11.9650 1049.9894 Constraint 138 289 5.3453 6.6816 13.3633 1047.3479 Constraint 452 608 5.3939 6.7424 13.4849 1043.4362 Constraint 452 650 4.6886 5.8607 11.7214 1040.1753 Constraint 452 642 5.7996 7.2494 14.4989 1038.7219 Constraint 153 551 4.9862 6.2327 12.4655 1034.2827 Constraint 74 635 4.0644 5.0805 10.1610 1027.9755 Constraint 74 331 4.1476 5.1844 10.3689 1021.4675 Constraint 58 642 5.7133 7.1417 14.2833 1020.0697 Constraint 126 635 5.0777 6.3471 12.6943 1016.0612 Constraint 126 325 5.5092 6.8865 13.7729 1013.6397 Constraint 295 393 5.5174 6.8968 13.7936 1010.3555 Constraint 447 658 3.3612 4.2016 8.4031 1008.7055 Constraint 431 650 4.7231 5.9039 11.8078 1007.9992 Constraint 447 650 5.6384 7.0480 14.0961 1002.8971 Constraint 65 635 5.6012 7.0015 14.0031 1002.6577 Constraint 65 642 4.1434 5.1793 10.3586 1002.2507 Constraint 439 658 3.7310 4.6637 9.3275 997.7866 Constraint 153 556 5.5214 6.9017 13.8034 997.4182 Constraint 414 681 4.5175 5.6469 11.2938 997.1390 Constraint 126 579 5.3554 6.6942 13.3885 985.6017 Constraint 74 628 5.5593 6.9492 13.8984 977.5568 Constraint 50 642 5.1933 6.4916 12.9832 973.8384 Constraint 431 658 5.9431 7.4289 14.8578 973.6623 Constraint 39 665 4.6632 5.8290 11.6580 973.1210 Constraint 153 525 5.3866 6.7332 13.4664 960.1448 Constraint 89 331 4.6659 5.8324 11.6648 954.6683 Constraint 65 628 4.8996 6.1246 12.2491 953.9340 Constraint 254 507 5.3946 6.7432 13.4865 942.8082 Constraint 273 422 6.2032 7.7540 15.5079 940.4916 Constraint 161 525 5.7925 7.2406 14.4813 938.0968 Constraint 82 628 4.4932 5.6165 11.2329 935.5758 Constraint 58 665 5.0658 6.3323 12.6645 932.0095 Constraint 82 331 4.8547 6.0684 12.1369 926.8818 Constraint 58 650 4.1401 5.1751 10.3503 925.2093 Constraint 74 336 4.9835 6.2293 12.4587 917.6983 Constraint 58 385 4.9132 6.1415 12.2830 917.5215 Constraint 50 658 4.3605 5.4507 10.9013 899.7862 Constraint 39 658 5.7018 7.1272 14.2544 893.0515 Constraint 82 619 5.0362 6.2952 12.5904 884.8615 Constraint 273 665 5.9695 7.4619 14.9237 879.2606 Constraint 89 619 4.8354 6.0442 12.0884 878.8611 Constraint 50 650 5.6536 7.0670 14.1341 869.4335 Constraint 32 673 4.3702 5.4628 10.9256 864.7653 Constraint 32 665 5.5495 6.9369 13.8738 862.8633 Constraint 74 362 4.6922 5.8653 11.7305 852.5513 Constraint 153 579 5.9423 7.4279 14.8558 843.7088 Constraint 486 572 5.5308 6.9135 13.8270 836.8214 Constraint 393 681 5.5801 6.9751 13.9503 836.1713 Constraint 459 572 5.4739 6.8424 13.6848 830.7721 Constraint 74 650 5.4206 6.7757 13.5515 830.5669 Constraint 385 650 5.9253 7.4067 14.8133 829.3633 Constraint 32 439 5.3548 6.6935 13.3870 820.2739 Constraint 170 254 4.9314 6.1643 12.3286 813.2507 Constraint 32 658 4.8243 6.0304 12.0607 797.4734 Constraint 170 244 5.1995 6.4994 12.9988 793.9333 Constraint 89 635 5.3218 6.6522 13.3045 790.3215 Constraint 58 362 4.6941 5.8676 11.7352 784.9328 Constraint 170 525 3.4379 4.2973 8.5947 782.8866 Constraint 452 551 5.4881 6.8601 13.7201 760.1613 Constraint 65 650 5.9180 7.3975 14.7950 741.2223 Constraint 82 635 5.8605 7.3256 14.6512 737.1509 Constraint 74 642 6.0200 7.5250 15.0499 735.1241 Constraint 58 374 3.9760 4.9700 9.9400 730.2061 Constraint 422 681 6.0305 7.5381 15.0763 687.3984 Constraint 273 336 6.1618 7.7022 15.4044 675.7327 Constraint 452 658 6.2426 7.8033 15.6066 666.0266 Constraint 170 518 4.0552 5.0690 10.1379 655.5055 Constraint 39 681 5.1503 6.4378 12.8756 636.8277 Constraint 98 331 4.4902 5.6127 11.2255 628.8120 Constraint 170 551 4.6921 5.8651 11.7302 609.2882 Constraint 170 507 4.9136 6.1420 12.2841 595.9819 Constraint 89 628 5.8193 7.2742 14.5484 595.2484 Constraint 447 642 6.1673 7.7091 15.4182 575.3742 Constraint 50 665 5.8727 7.3409 14.6817 569.0248 Constraint 74 385 6.0441 7.5552 15.1104 551.1844 Constraint 414 692 5.4465 6.8081 13.6161 551.0939 Constraint 146 303 6.1073 7.6341 15.2682 547.8699 Constraint 58 658 5.9424 7.4280 14.8560 537.2107 Constraint 182 518 4.5814 5.7268 11.4536 534.2260 Constraint 89 608 5.6584 7.0729 14.1459 531.9793 Constraint 65 362 5.4227 6.7783 13.5567 527.4050 Constraint 39 673 5.8916 7.3645 14.7291 525.5735 Constraint 170 533 5.9411 7.4264 14.8529 524.4840 Constraint 23 673 5.4812 6.8515 13.7030 513.1501 Constraint 170 542 5.8626 7.3283 14.6566 504.7006 Constraint 98 619 4.9763 6.2204 12.4409 463.4483 Constraint 422 692 5.0845 6.3556 12.7112 463.3295 Constraint 113 331 5.2142 6.5178 13.0356 463.2941 Constraint 39 374 5.4094 6.7618 13.5235 454.9669 Constraint 98 325 5.6285 7.0357 14.0713 452.3779 Constraint 32 681 5.8435 7.3044 14.6088 438.5908 Constraint 146 295 6.0941 7.6177 15.2353 436.3177 Constraint 244 494 5.0634 6.3293 12.6586 422.9982 Constraint 138 280 6.1768 7.7210 15.4421 405.8748 Constraint 182 507 5.4679 6.8349 13.6698 396.8072 Constraint 439 650 6.2838 7.8548 15.7096 366.0875 Constraint 17 673 4.9724 6.2155 12.4311 354.2404 Constraint 23 681 4.1989 5.2487 10.4973 342.5574 Constraint 17 681 5.0757 6.3446 12.6892 338.1727 Constraint 182 525 5.6184 7.0230 14.0459 330.9475 Constraint 170 262 4.3171 5.3964 10.7928 324.1703 Constraint 113 325 4.6403 5.8004 11.6007 309.7333 Constraint 161 273 6.1209 7.6511 15.3023 304.1051 Constraint 58 336 6.1366 7.6708 15.3416 293.2356 Constraint 431 579 6.2236 7.7795 15.5590 279.2083 Constraint 74 374 5.3038 6.6297 13.2595 270.0800 Constraint 106 619 5.5178 6.8972 13.7945 265.4940 Constraint 393 692 5.4243 6.7803 13.5607 245.8791 Constraint 74 352 6.1645 7.7056 15.4112 241.2307 Constraint 170 422 5.6925 7.1156 14.2312 236.0936 Constraint 459 650 5.7189 7.1486 14.2973 233.2158 Constraint 254 494 5.9140 7.3926 14.7851 229.7243 Constraint 17 692 5.0267 6.2834 12.5667 228.5924 Constraint 126 608 6.0562 7.5703 15.1406 224.0153 Constraint 39 414 6.1328 7.6660 15.3320 218.9813 Constraint 138 343 6.1499 7.6874 15.3748 217.9064 Constraint 194 518 5.9318 7.4147 14.8294 215.9063 Constraint 194 525 4.3234 5.4043 10.8086 214.5516 Constraint 262 402 5.8686 7.3358 14.6716 213.8050 Constraint 237 494 5.5139 6.8923 13.7846 198.8291 Constraint 374 665 6.2154 7.7693 15.5385 188.0628 Constraint 262 692 5.9837 7.4796 14.9592 184.3949 Constraint 113 303 5.5056 6.8820 13.7639 182.2902 Constraint 431 673 6.1353 7.6691 15.3383 178.4082 Constraint 422 494 6.2161 7.7701 15.5403 176.6028 Constraint 402 692 5.9938 7.4923 14.9846 169.7060 Constraint 50 447 6.1667 7.7084 15.4168 167.4042 Constraint 244 507 6.0564 7.5705 15.1411 166.5748 Constraint 161 244 6.0619 7.5773 15.1546 165.3005 Constraint 254 439 6.1406 7.6758 15.3516 164.3867 Constraint 89 325 6.1080 7.6351 15.2701 161.8610 Constraint 82 352 5.9885 7.4857 14.9714 151.5935 Constraint 237 507 5.7486 7.1858 14.3716 150.8121 Constraint 74 138 6.0065 7.5081 15.0162 150.7759 Constraint 82 362 5.9653 7.4566 14.9133 149.5383 Constraint 331 635 6.2085 7.7606 15.5211 148.9684 Constraint 113 587 5.2607 6.5759 13.1518 142.4542 Constraint 65 374 5.4999 6.8749 13.7498 140.0269 Constraint 23 692 5.7167 7.1458 14.2916 138.6460 Constraint 459 579 5.7181 7.1476 14.2952 133.3655 Constraint 39 650 5.8589 7.3237 14.6474 130.7078 Constraint 113 319 5.0049 6.2561 12.5122 126.0729 Constraint 471 608 5.7313 7.1641 14.3282 124.3288 Constraint 393 665 5.7644 7.2055 14.4109 121.5466 Constraint 244 422 4.9619 6.2024 12.4048 120.5863 Constraint 9 681 5.3738 6.7173 13.4346 118.9250 Constraint 459 598 5.8972 7.3716 14.7431 117.4816 Constraint 459 628 5.8776 7.3470 14.6940 114.0225 Constraint 58 635 5.5484 6.9355 13.8710 111.7517 Constraint 237 422 5.7912 7.2390 14.4779 111.7438 Constraint 414 650 6.2755 7.8444 15.6888 106.2365 Constraint 244 486 5.1536 6.4420 12.8840 104.3291 Constraint 170 486 6.0981 7.6226 15.2453 96.9228 Constraint 244 439 5.0858 6.3573 12.7145 94.4185 Constraint 362 650 6.1416 7.6770 15.3541 92.4002 Constraint 244 518 5.8318 7.2897 14.5794 92.1414 Constraint 65 336 5.2302 6.5377 13.0754 89.6310 Constraint 113 608 5.5337 6.9171 13.8342 88.8078 Constraint 138 579 5.9071 7.3839 14.7678 88.5528 Constraint 431 494 6.3382 7.9227 15.8455 88.3996 Constraint 237 518 5.0454 6.3067 12.6134 85.2970 Constraint 254 556 5.6148 7.0186 14.0371 81.6594 Constraint 579 650 5.9340 7.4175 14.8350 79.2907 Constraint 98 628 5.2420 6.5525 13.1050 77.9560 Constraint 65 331 4.1898 5.2373 10.4746 77.7122 Constraint 138 431 6.2289 7.7862 15.5723 77.6643 Constraint 211 422 5.9299 7.4124 14.8247 77.2924 Constraint 65 385 5.8694 7.3368 14.6736 77.0267 Constraint 98 635 5.6299 7.0373 14.0746 76.9591 Constraint 170 494 5.9804 7.4755 14.9510 75.9656 Constraint 9 692 5.7985 7.2481 14.4962 75.7078 Constraint 106 331 5.1178 6.3972 12.7945 74.4275 Constraint 244 431 5.2970 6.6212 13.2424 73.8277 Constraint 50 385 5.0849 6.3561 12.7122 72.8537 Constraint 98 352 5.9603 7.4504 14.9008 72.8193 Constraint 146 402 6.0521 7.5652 15.1303 72.5483 Constraint 182 254 6.0835 7.6043 15.2087 71.8204 Constraint 113 579 5.6944 7.1180 14.2361 70.9269 Constraint 202 422 6.2849 7.8562 15.7124 68.1179 Constraint 58 628 5.1728 6.4660 12.9320 67.8493 Constraint 39 642 5.2184 6.5230 13.0460 67.7921 Constraint 182 494 4.0380 5.0475 10.0950 66.6038 Constraint 336 650 5.9164 7.3955 14.7911 66.0293 Constraint 74 619 4.8544 6.0680 12.1361 65.9015 Constraint 39 393 5.9524 7.4405 14.8810 65.3929 Constraint 138 402 5.9634 7.4542 14.9084 64.0657 Constraint 244 525 6.0265 7.5332 15.0664 63.9361 Constraint 254 579 5.9017 7.3772 14.7543 63.8196 Constraint 220 518 5.3944 6.7430 13.4860 62.4690 Constraint 228 525 5.7247 7.1559 14.3117 61.9858 Constraint 478 658 6.3640 7.9550 15.9101 60.4429 Constraint 182 533 5.0335 6.2919 12.5839 60.4111 Constraint 202 402 6.1740 7.7175 15.4350 60.2378 Constraint 254 452 6.2619 7.8274 15.6548 60.0230 Constraint 194 280 5.7238 7.1547 14.3095 59.7803 Constraint 237 525 4.8884 6.1105 12.2209 59.6801 Constraint 39 385 5.7201 7.1502 14.3003 58.5497 Constraint 486 650 5.9591 7.4489 14.8977 58.0976 Constraint 194 262 6.1719 7.7149 15.4298 57.6717 Constraint 228 518 4.9033 6.1291 12.2582 56.9039 Constraint 23 665 5.4602 6.8252 13.6505 56.8727 Constraint 50 374 4.2078 5.2598 10.5195 56.3115 Constraint 32 447 5.7958 7.2448 14.4895 55.2237 Constraint 138 331 5.9064 7.3831 14.7661 54.9305 Constraint 161 289 6.2085 7.7606 15.5213 54.6912 Constraint 254 518 5.7376 7.1720 14.3440 54.5986 Constraint 244 551 6.2449 7.8061 15.6122 54.4654 Constraint 98 608 5.5160 6.8951 13.7901 54.2693 Constraint 50 362 4.4412 5.5516 11.1031 53.3178 Constraint 244 673 6.0687 7.5858 15.1717 51.9258 Constraint 228 507 5.1387 6.4234 12.8469 51.7809 Constraint 202 692 6.1570 7.6962 15.3924 51.6515 Constraint 126 385 6.2467 7.8084 15.6168 50.4144 Constraint 194 494 5.1527 6.4409 12.8818 50.2721 Constraint 58 414 6.1369 7.6712 15.3424 49.7544 Constraint 374 681 5.9051 7.3814 14.7628 49.5736 Constraint 228 494 5.3656 6.7069 13.4139 49.5580 Constraint 374 650 5.9646 7.4558 14.9116 49.4285 Constraint 23 658 4.9591 6.1989 12.3978 49.3057 Constraint 220 525 5.3652 6.7065 13.4130 49.0854 Constraint 65 665 5.2117 6.5146 13.0292 48.8495 Constraint 82 650 5.4313 6.7892 13.5783 48.7826 Constraint 295 362 4.9370 6.1712 12.3425 47.6465 Constraint 23 439 5.4120 6.7650 13.5301 46.9758 Constraint 50 673 5.7587 7.1984 14.3968 46.8622 Constraint 452 598 6.3864 7.9830 15.9660 46.8265 Constraint 82 608 5.4202 6.7753 13.5506 46.3791 Constraint 17 422 5.7015 7.1269 14.2538 45.7972 Constraint 459 619 6.1236 7.6545 15.3091 45.6079 Constraint 393 707 6.1550 7.6937 15.3874 45.3887 Constraint 89 352 6.3812 7.9765 15.9530 45.3551 Constraint 82 336 4.5206 5.6508 11.3015 43.1388 Constraint 65 658 5.5529 6.9411 13.8822 42.4438 Constraint 50 681 5.3029 6.6287 13.2573 41.9548 Constraint 202 525 4.6980 5.8725 11.7450 41.7888 Constraint 393 716 5.0363 6.2953 12.5907 41.3578 Constraint 170 431 4.1112 5.1390 10.2779 41.2316 Constraint 170 280 6.2950 7.8687 15.7375 40.8503 Constraint 106 325 5.0410 6.3013 12.6026 39.9424 Constraint 170 556 6.2853 7.8566 15.7132 39.8109 Constraint 126 650 5.4904 6.8631 13.7261 39.5317 Constraint 471 542 6.3393 7.9241 15.8482 38.4730 Constraint 194 507 5.5305 6.9132 13.8264 38.1917 Constraint 422 716 5.4584 6.8230 13.6459 37.7736 Constraint 211 280 6.1894 7.7367 15.4735 37.1150 Constraint 402 723 4.4027 5.5034 11.0067 36.3771 Constraint 138 650 6.2463 7.8079 15.6158 35.7704 Constraint 82 642 5.4156 6.7695 13.5390 35.7196 Constraint 486 658 6.2267 7.7834 15.5669 35.4497 Constraint 82 385 5.8821 7.3526 14.7052 35.1183 Constraint 471 551 4.2148 5.2686 10.5371 34.6180 Constraint 113 619 6.0567 7.5709 15.1419 34.1242 Constraint 17 707 5.4981 6.8727 13.7453 33.6938 Constraint 3 681 5.9848 7.4810 14.9621 33.4932 Constraint 161 228 5.9488 7.4360 14.8720 33.3345 Constraint 447 665 4.9298 6.1623 12.3245 32.6210 Constraint 439 681 4.8958 6.1198 12.2396 31.8469 Constraint 89 336 6.0371 7.5464 15.0927 31.6620 Constraint 254 542 5.9243 7.4054 14.8108 31.3458 Constraint 146 556 5.3474 6.6843 13.3685 30.5127 Constraint 478 551 6.1611 7.7014 15.4028 29.3479 Constraint 471 579 4.3128 5.3910 10.7819 29.3479 Constraint 153 486 5.3043 6.6304 13.2608 29.3479 Constraint 32 692 4.8547 6.0683 12.1367 29.2379 Constraint 32 374 5.4790 6.8488 13.6975 29.1169 Constraint 211 518 3.9026 4.8782 9.7564 28.9834 Constraint 402 716 6.2737 7.8421 15.6842 28.5906 Constraint 211 525 5.3396 6.6744 13.3489 28.5631 Constraint 447 673 4.2147 5.2684 10.5368 28.3215 Constraint 126 587 5.9323 7.4154 14.8309 28.1406 Constraint 452 665 5.1586 6.4483 12.8966 27.3663 Constraint 89 579 5.9620 7.4524 14.9049 27.3138 Constraint 459 658 4.9104 6.1380 12.2760 27.1649 Constraint 106 608 5.7607 7.2008 14.4017 26.5826 Constraint 237 486 4.8514 6.0642 12.1284 26.5321 Constraint 82 374 4.9238 6.1548 12.3096 25.7588 Constraint 237 551 5.5992 6.9990 13.9980 25.5215 Constraint 393 723 5.7967 7.2459 14.4918 25.4597 Constraint 228 422 5.1969 6.4961 12.9923 24.7634 Constraint 3 692 4.2181 5.2726 10.5453 22.8468 Constraint 9 707 5.9028 7.3785 14.7571 22.7149 Constraint 237 439 5.6263 7.0328 14.0657 21.9973 Constraint 182 486 4.9691 6.2114 12.4228 21.2001 Constraint 106 587 5.0504 6.3130 12.6261 21.1096 Constraint 65 352 6.2543 7.8179 15.6359 20.7995 Constraint 50 336 6.0492 7.5615 15.1229 20.7005 Constraint 303 385 6.2212 7.7766 15.5531 20.4917 Constraint 431 681 5.1259 6.4074 12.8149 20.3114 Constraint 89 642 5.3052 6.6315 13.2631 19.8931 Constraint 237 673 4.5740 5.7175 11.4349 19.6440 Constraint 82 325 5.0492 6.3115 12.6230 19.6362 Constraint 182 262 5.9626 7.4532 14.9065 19.1539 Constraint 244 478 5.1383 6.4229 12.8459 18.8549 Constraint 39 439 5.9888 7.4860 14.9720 18.7738 Constraint 414 707 5.9468 7.4335 14.8670 18.5670 Constraint 452 673 6.2980 7.8725 15.7450 18.5336 Constraint 439 692 4.0750 5.0937 10.1875 18.5336 Constraint 471 556 5.9914 7.4893 14.9786 18.3310 Constraint 486 556 6.2259 7.7824 15.5648 18.2332 Constraint 126 303 6.1805 7.7256 15.4512 18.0109 Constraint 211 533 5.1147 6.3934 12.7868 17.4249 Constraint 262 716 5.6106 7.0133 14.0265 17.3083 Constraint 32 414 6.2493 7.8116 15.6233 16.7342 Constraint 9 673 5.1924 6.4906 12.9811 16.7167 Constraint 74 325 4.8908 6.1135 12.2271 16.3469 Constraint 431 507 6.3916 7.9894 15.9789 16.2434 Constraint 106 352 5.6074 7.0092 14.0184 16.2181 Constraint 244 716 6.1542 7.6928 15.3856 16.0949 Constraint 106 319 4.1695 5.2118 10.4237 15.9953 Constraint 23 707 5.3168 6.6460 13.2920 15.8780 Constraint 65 619 5.6783 7.0979 14.1958 15.5679 Constraint 58 331 5.0408 6.3010 12.6020 15.5679 Constraint 58 126 4.8169 6.0211 12.0423 15.5679 Constraint 50 635 5.6992 7.1240 14.2480 15.5679 Constraint 202 518 6.2501 7.8126 15.6252 15.4419 Constraint 89 362 6.3220 7.9026 15.8051 15.3688 Constraint 471 563 6.1228 7.6535 15.3069 15.1599 Constraint 126 459 6.3053 7.8816 15.7633 15.1599 Constraint 106 303 5.1638 6.4548 12.9095 15.1599 Constraint 89 459 5.3339 6.6673 13.3347 15.1599 Constraint 82 343 5.7715 7.2144 14.4287 15.1599 Constraint 74 459 5.4688 6.8360 13.6719 15.1599 Constraint 65 459 5.3301 6.6627 13.3253 15.1599 Constraint 126 452 6.1511 7.6888 15.3777 15.0664 Constraint 385 681 5.5963 6.9954 13.9908 14.7501 Constraint 273 681 6.0747 7.5934 15.1868 14.7501 Constraint 244 692 6.0779 7.5974 15.1948 14.7501 Constraint 39 635 6.1006 7.6257 15.2515 14.6218 Constraint 39 362 5.7969 7.2461 14.4921 14.6218 Constraint 161 551 6.2097 7.7621 15.5242 14.5494 Constraint 153 452 6.2298 7.7873 15.5745 14.1881 Constraint 138 393 6.1987 7.7483 15.4966 14.1881 Constraint 74 608 6.1101 7.6377 15.2753 14.0478 Constraint 3 393 6.2713 7.8392 15.6783 14.0472 Constraint 23 716 5.1655 6.4569 12.9139 13.8462 Constraint 39 447 6.1683 7.7104 15.4208 13.7195 Constraint 126 642 4.8623 6.0779 12.1559 13.3133 Constraint 402 681 5.5170 6.8962 13.7924 13.2444 Constraint 211 507 5.0976 6.3720 12.7440 13.1609 Constraint 106 598 5.9014 7.3768 14.7535 12.7322 Constraint 89 587 5.8078 7.2598 14.5196 12.7237 Constraint 182 542 6.3003 7.8753 15.7507 12.6833 Constraint 32 650 5.9537 7.4422 14.8843 12.5048 Constraint 58 673 5.4280 6.7850 13.5700 12.1020 Constraint 202 280 5.4218 6.7773 13.5546 11.9936 Constraint 32 642 5.1022 6.3778 12.7556 11.7221 Constraint 23 374 5.7750 7.2187 14.4374 11.7221 Constraint 478 673 6.3635 7.9544 15.9087 11.6867 Constraint 228 439 5.6927 7.1159 14.2318 11.6832 Constraint 211 692 5.2412 6.5515 13.1031 11.6193 Constraint 113 598 5.2450 6.5563 13.1126 11.4590 Constraint 65 138 6.1176 7.6470 15.2940 11.4412 Constraint 74 452 5.7942 7.2427 14.4854 11.3504 Constraint 58 452 6.2991 7.8738 15.7477 11.3504 Constraint 452 542 5.5468 6.9335 13.8669 10.9749 Constraint 422 723 6.0764 7.5954 15.1909 10.9174 Constraint 262 723 3.8153 4.7691 9.5383 10.9174 Constraint 74 665 5.0100 6.2625 12.5249 10.9041 Constraint 58 681 4.9157 6.1446 12.2893 10.9041 Constraint 228 673 4.7016 5.8770 11.7540 10.8523 Constraint 280 723 5.9873 7.4841 14.9682 10.7869 Constraint 439 716 5.6455 7.0568 14.1137 9.9517 Constraint 74 658 5.0811 6.3514 12.7029 9.9349 Constraint 98 310 5.1645 6.4557 12.9114 9.8628 Constraint 237 692 5.1502 6.4377 12.8754 9.1734 Constraint 551 635 6.3869 7.9836 15.9673 9.1458 Constraint 39 692 5.7868 7.2335 14.4671 8.9890 Constraint 113 336 6.1417 7.6771 15.3543 8.7745 Constraint 106 628 4.3037 5.3796 10.7592 8.7370 Constraint 89 650 4.5251 5.6563 11.3126 8.7370 Constraint 161 723 6.3453 7.9317 15.8634 8.5471 Constraint 452 556 4.4470 5.5587 11.1175 8.5456 Constraint 32 393 6.0678 7.5847 15.1694 8.2043 Constraint 452 533 5.0566 6.3207 12.6414 8.1148 Constraint 431 533 5.3105 6.6382 13.2763 8.1148 Constraint 254 533 4.4059 5.5074 11.0149 8.1148 Constraint 58 447 6.1178 7.6472 15.2944 8.0204 Constraint 385 673 5.4406 6.8008 13.6016 7.5576 Constraint 273 673 6.1055 7.6319 15.2638 7.5576 Constraint 32 716 5.8419 7.3023 14.6047 7.3390 Constraint 32 385 6.0283 7.5353 15.0707 7.0209 Constraint 74 587 5.7457 7.1822 14.3644 6.9849 Constraint 17 665 5.1317 6.4146 12.8291 6.7450 Constraint 39 533 5.2028 6.5035 13.0070 6.3661 Constraint 273 692 6.2901 7.8626 15.7253 6.2437 Constraint 452 563 5.4817 6.8522 13.7043 6.2326 Constraint 23 723 5.1352 6.4190 12.8380 6.0096 Constraint 126 262 5.2867 6.6084 13.2168 5.8191 Constraint 262 507 5.3957 6.7447 13.4893 5.7149 Constraint 126 658 6.0551 7.5689 15.1377 5.5784 Constraint 459 556 5.3637 6.7046 13.4092 5.1589 Constraint 98 598 4.9120 6.1400 12.2801 5.0929 Constraint 32 563 6.1121 7.6401 15.2802 5.0929 Constraint 32 106 5.9642 7.4552 14.9104 5.0929 Constraint 194 422 5.5803 6.9753 13.9507 5.0424 Constraint 385 658 6.0575 7.5718 15.1437 5.0112 Constraint 244 681 6.1718 7.7148 15.4295 5.0112 Constraint 262 525 5.8571 7.3213 14.6427 4.8508 Constraint 182 422 4.3807 5.4758 10.9517 4.8457 Constraint 23 447 5.6716 7.0895 14.1790 4.7685 Constraint 563 635 5.6000 7.0000 13.9999 4.7320 Constraint 17 374 5.6554 7.0693 14.1385 4.7294 Constraint 153 244 5.1885 6.4857 12.9714 4.6871 Constraint 414 723 6.3030 7.8787 15.7574 4.6834 Constraint 211 681 6.2080 7.7600 15.5200 4.5729 Constraint 211 673 3.5369 4.4211 8.8422 4.5729 Constraint 138 254 5.2003 6.5003 13.0007 4.3031 Constraint 220 692 4.9855 6.2318 12.4636 4.3027 Constraint 17 237 5.2781 6.5976 13.1952 4.3027 Constraint 459 665 5.9878 7.4848 14.9696 4.1127 Constraint 211 431 6.0149 7.5186 15.0373 4.0413 Constraint 202 295 5.9758 7.4698 14.9395 4.0413 Constraint 202 289 3.6855 4.6069 9.2138 4.0413 Constraint 202 273 5.7355 7.1694 14.3387 4.0413 Constraint 194 385 4.4561 5.5702 11.1403 4.0413 Constraint 194 336 3.0889 3.8611 7.7222 4.0413 Constraint 194 295 3.1526 3.9407 7.8815 4.0413 Constraint 194 289 5.0386 6.2983 12.5966 4.0413 Constraint 194 273 4.6421 5.8027 11.6053 4.0413 Constraint 182 336 4.5477 5.6847 11.3693 4.0413 Constraint 182 331 4.2645 5.3306 10.6612 4.0413 Constraint 182 325 6.0752 7.5940 15.1880 4.0413 Constraint 170 331 5.7738 7.2173 14.4345 4.0413 Constraint 106 579 5.5761 6.9701 13.9402 3.9389 Constraint 17 716 5.0542 6.3178 12.6356 3.9389 Constraint 3 707 4.1994 5.2492 10.4984 3.9389 Constraint 220 551 5.3679 6.7099 13.4198 3.9264 Constraint 220 507 4.7134 5.8918 11.7836 3.9264 Constraint 220 494 4.4286 5.5358 11.0716 3.9264 Constraint 220 486 4.4778 5.5972 11.1945 3.9264 Constraint 17 658 4.8219 6.0274 12.0548 3.9074 Constraint 17 439 5.3742 6.7177 13.4355 3.9074 Constraint 211 556 4.8604 6.0755 12.1511 3.8767 Constraint 211 551 4.9716 6.2145 12.4290 3.8767 Constraint 194 343 6.1066 7.6333 15.2665 3.8767 Constraint 194 325 5.3883 6.7354 13.4709 3.8767 Constraint 194 303 5.1667 6.4583 12.9167 3.8767 Constraint 182 635 5.0437 6.3046 12.6091 3.8767 Constraint 182 579 4.8075 6.0094 12.0187 3.8767 Constraint 170 587 5.4197 6.7747 13.5493 3.8767 Constraint 153 228 6.0735 7.5919 15.1838 3.8680 Constraint 126 551 6.0903 7.6129 15.2258 3.7924 Constraint 447 692 6.0870 7.6088 15.2176 3.7835 Constraint 273 723 6.3400 7.9251 15.8501 3.6005 Constraint 572 642 5.3782 6.7227 13.4454 3.4610 Constraint 9 422 5.6592 7.0740 14.1480 3.1395 Constraint 393 673 4.6268 5.7835 11.5670 3.0320 Constraint 374 658 5.8081 7.2601 14.5202 3.0320 Constraint 9 716 5.5861 6.9826 13.9652 2.9801 Constraint 471 598 6.0181 7.5227 15.0453 2.9596 Constraint 161 422 5.9741 7.4677 14.9353 2.9506 Constraint 138 262 5.4175 6.7718 13.5436 2.9506 Constraint 65 563 6.0288 7.5360 15.0720 2.9506 Constraint 89 310 5.1642 6.4553 12.9106 2.8376 Constraint 82 579 6.3750 7.9688 15.9375 2.8376 Constraint 65 452 5.5447 6.9309 13.8617 2.8376 Constraint 50 452 6.0576 7.5720 15.1439 2.8376 Constraint 50 431 6.3972 7.9965 15.9930 2.8376 Constraint 295 414 6.1608 7.7010 15.4020 2.8289 Constraint 138 551 4.9701 6.2126 12.4252 2.8282 Constraint 452 525 5.8092 7.2615 14.5230 2.7437 Constraint 182 431 5.9445 7.4306 14.8612 2.7348 Constraint 182 414 5.5469 6.9337 13.8673 2.7348 Constraint 182 280 4.9886 6.2358 12.4715 2.7348 Constraint 182 273 4.6164 5.7705 11.5410 2.7348 Constraint 303 402 3.8400 4.8000 9.6000 2.6340 Constraint 494 729 4.8434 6.0542 12.1084 2.5573 Constraint 494 723 4.8965 6.1206 12.2413 2.5573 Constraint 439 729 6.3445 7.9306 15.8612 2.5573 Constraint 579 658 5.7541 7.1927 14.3853 2.5464 Constraint 336 658 5.9852 7.4815 14.9631 2.5464 Constraint 202 494 6.3583 7.9479 15.8958 2.5464 Constraint 146 525 5.4616 6.8270 13.6540 2.5464 Constraint 146 262 5.0601 6.3251 12.6502 2.5464 Constraint 146 254 5.7720 7.2150 14.4300 2.5464 Constraint 138 658 6.2687 7.8359 15.6718 2.5464 Constraint 138 556 5.4503 6.8129 13.6259 2.5464 Constraint 138 525 4.7439 5.9299 11.8599 2.5464 Constraint 126 431 6.3195 7.8994 15.7988 2.5464 Constraint 126 295 5.0575 6.3219 12.6438 2.5464 Constraint 126 273 4.5093 5.6366 11.2732 2.5464 Constraint 113 556 6.0647 7.5809 15.1617 2.5464 Constraint 98 587 4.9421 6.1776 12.3552 2.5464 Constraint 74 533 5.2147 6.5184 13.0368 2.5464 Constraint 65 587 5.3209 6.6511 13.3021 2.5464 Constraint 32 533 5.2173 6.5216 13.0432 2.5464 Constraint 23 563 6.1355 7.6694 15.3388 2.5464 Constraint 23 98 6.1221 7.6526 15.3052 2.5464 Constraint 439 723 6.0030 7.5037 15.0074 2.5428 Constraint 459 587 5.5423 6.9279 13.8557 2.4152 Constraint 194 673 4.7604 5.9505 11.9009 2.3926 Constraint 422 707 4.8156 6.0195 12.0391 2.3458 Constraint 106 635 5.3794 6.7242 13.4485 2.1671 Constraint 89 385 5.8954 7.3692 14.7384 2.1671 Constraint 89 374 5.2373 6.5466 13.0932 2.1671 Constraint 50 439 6.2961 7.8701 15.7401 2.1671 Constraint 126 254 6.0179 7.5224 15.0447 2.1608 Constraint 126 244 5.9825 7.4782 14.9563 2.1608 Constraint 113 507 5.2128 6.5160 13.0321 2.1608 Constraint 113 262 4.9351 6.1689 12.3378 2.1608 Constraint 106 507 4.9145 6.1432 12.2863 2.1608 Constraint 106 273 3.8271 4.7839 9.5678 2.1608 Constraint 106 262 4.6998 5.8747 11.7495 2.1608 Constraint 106 254 3.8534 4.8167 9.6335 2.1608 Constraint 17 211 5.6479 7.0599 14.1198 2.1514 Constraint 9 237 5.3026 6.6282 13.2564 2.1514 Constraint 9 211 5.6773 7.0967 14.1934 2.1514 Constraint 161 237 4.1749 5.2186 10.4371 2.1406 Constraint 153 237 6.3354 7.9193 15.8386 2.1406 Constraint 170 325 6.0734 7.5917 15.1834 2.1030 Constraint 58 608 5.6844 7.1055 14.2109 2.0941 Constraint 385 707 6.3990 7.9987 15.9974 2.0206 Constraint 9 723 4.4250 5.5313 11.0625 1.9694 Constraint 3 723 4.2545 5.3182 10.6363 1.9694 Constraint 3 716 5.6628 7.0785 14.1569 1.9694 Constraint 478 665 6.3387 7.9234 15.8467 1.9478 Constraint 170 579 5.7351 7.1689 14.3378 1.9383 Constraint 642 716 5.6978 7.1223 14.2446 1.9352 Constraint 58 352 6.1520 7.6900 15.3799 1.8921 Constraint 50 628 5.2504 6.5630 13.1260 1.8921 Constraint 39 723 6.2901 7.8626 15.7253 1.8917 Constraint 32 707 5.1250 6.4062 12.8125 1.8917 Constraint 556 635 4.2387 5.2984 10.5967 1.8292 Constraint 533 635 6.3588 7.9485 15.8970 1.8292 Constraint 194 692 5.5026 6.8782 13.7564 1.8292 Constraint 194 439 5.7604 7.2005 14.4010 1.8292 Constraint 182 692 4.7208 5.9010 11.8020 1.8292 Constraint 182 681 6.1466 7.6833 15.3666 1.8292 Constraint 182 673 3.4937 4.3671 8.7343 1.8292 Constraint 126 202 4.5515 5.6893 11.3786 1.8292 Constraint 106 244 6.3773 7.9716 15.9433 1.8292 Constraint 459 563 6.3713 7.9642 15.9283 1.7567 Constraint 170 273 3.5357 4.4196 8.8392 1.7567 Constraint 161 431 6.1489 7.6862 15.3723 1.7567 Constraint 161 385 5.9756 7.4696 14.9391 1.7567 Constraint 161 336 3.8591 4.8239 9.6478 1.7567 Constraint 161 303 5.7161 7.1451 14.2902 1.7567 Constraint 161 295 4.2695 5.3369 10.6737 1.7567 Constraint 113 254 5.5947 6.9934 13.9868 1.7567 Constraint 106 431 5.5403 6.9254 13.8507 1.7567 Constraint 431 572 5.9889 7.4861 14.9721 1.7180 Constraint 447 572 4.8183 6.0229 12.0458 1.6975 Constraint 194 533 5.3986 6.7482 13.4964 1.5960 Constraint 98 319 5.8170 7.2713 14.5425 1.5438 Constraint 211 494 4.7309 5.9137 11.8274 1.2732 Constraint 113 628 6.0679 7.5848 15.1697 1.2732 Constraint 39 563 5.9057 7.3821 14.7642 1.2732 Constraint 486 579 5.2865 6.6082 13.2164 1.1967 Constraint 254 572 5.7588 7.1985 14.3969 1.1125 Constraint 23 729 5.3656 6.7070 13.4139 1.0107 Constraint 9 729 6.0133 7.5166 15.0331 1.0107 Constraint 153 507 3.6218 4.5272 9.0544 0.9613 Constraint 447 681 6.0870 7.6088 15.2176 0.9459 Constraint 374 673 5.9939 7.4923 14.9846 0.9459 Constraint 9 374 5.4647 6.8309 13.6618 0.9459 Constraint 563 658 5.9009 7.3761 14.7522 0.9146 Constraint 563 650 4.0827 5.1033 10.2067 0.9146 Constraint 563 642 5.4097 6.7621 13.5242 0.9146 Constraint 556 658 4.5588 5.6984 11.3969 0.9146 Constraint 556 650 6.2439 7.8049 15.6098 0.9146 Constraint 556 642 4.5156 5.6445 11.2889 0.9146 Constraint 551 658 5.4491 6.8114 13.6227 0.9146 Constraint 542 658 4.5609 5.7011 11.4022 0.9146 Constraint 459 551 5.4578 6.8223 13.6446 0.9146 Constraint 459 525 5.9250 7.4063 14.8125 0.9146 Constraint 447 563 6.1444 7.6806 15.3611 0.9146 Constraint 439 628 5.5282 6.9103 13.8206 0.9146 Constraint 439 587 4.4303 5.5378 11.0757 0.9146 Constraint 439 579 5.0218 6.2772 12.5544 0.9146 Constraint 439 572 3.8777 4.8471 9.6943 0.9146 Constraint 431 563 4.5412 5.6765 11.3529 0.9146 Constraint 422 587 3.7373 4.6716 9.3432 0.9146 Constraint 422 579 4.9458 6.1822 12.3644 0.9146 Constraint 414 598 4.4352 5.5440 11.0881 0.9146 Constraint 414 587 5.5242 6.9052 13.8104 0.9146 Constraint 414 579 3.4898 4.3622 8.7244 0.9146 Constraint 393 598 6.0373 7.5466 15.0932 0.9146 Constraint 385 579 5.6814 7.1017 14.2034 0.9146 Constraint 385 563 5.6692 7.0865 14.1729 0.9146 Constraint 362 658 4.9353 6.1691 12.3383 0.9146 Constraint 362 563 6.1609 7.7011 15.4021 0.9146 Constraint 273 579 6.1992 7.7490 15.4980 0.9146 Constraint 228 692 4.6484 5.8105 11.6210 0.9146 Constraint 228 681 6.1252 7.6565 15.3131 0.9146 Constraint 228 587 4.5384 5.6729 11.3459 0.9146 Constraint 211 608 4.9176 6.1470 12.2940 0.9146 Constraint 211 598 6.3713 7.9641 15.9282 0.9146 Constraint 211 587 3.4808 4.3510 8.7021 0.9146 Constraint 106 228 5.3970 6.7462 13.4925 0.9146 Constraint 106 194 5.2150 6.5188 13.0376 0.9146 Constraint 220 673 6.0714 7.5893 15.1785 0.8452 Constraint 273 650 6.2876 7.8595 15.7191 0.8354 Constraint 98 343 5.5591 6.9489 13.8979 0.8354 Constraint 331 628 5.5874 6.9843 13.9686 0.8034 Constraint 331 619 6.3495 7.9369 15.8738 0.8034 Constraint 262 673 5.7314 7.1642 14.3284 0.8034 Constraint 262 665 6.0000 7.4999 14.9999 0.8034 Constraint 74 579 6.2626 7.8283 15.6566 0.8034 Constraint 295 374 4.0398 5.0498 10.0995 0.7926 Constraint 289 393 5.6223 7.0279 14.0558 0.7926 Constraint 138 374 4.0193 5.0241 10.0483 0.7926 Constraint 126 374 6.0631 7.5788 15.1577 0.7926 Constraint 98 336 6.0886 7.6107 15.2215 0.7926 Constraint 161 507 4.4716 5.5895 11.1790 0.6321 Constraint 447 716 5.4001 6.7501 13.5002 0.6062 Constraint 494 692 6.1949 7.7437 15.4873 0.5680 Constraint 494 673 5.7323 7.1654 14.3309 0.5680 Constraint 220 422 4.9103 6.1378 12.2757 0.5635 Constraint 507 587 5.4340 6.7925 13.5850 0.4041 Constraint 507 579 4.6935 5.8669 11.7339 0.4041 Constraint 494 572 4.3542 5.4427 10.8855 0.4041 Constraint 486 608 5.7258 7.1572 14.3144 0.4041 Constraint 126 507 5.3844 6.7304 13.4609 0.4041 Constraint 126 422 4.9475 6.1844 12.3688 0.4041 Constraint 126 237 5.3267 6.6584 13.3168 0.4041 Constraint 113 280 3.8850 4.8563 9.7126 0.4041 Constraint 106 289 4.7670 5.9587 11.9174 0.4041 Constraint 106 280 4.2124 5.2655 10.5310 0.4041 Constraint 98 303 6.0293 7.5366 15.0732 0.4041 Constraint 98 289 3.2411 4.0514 8.1028 0.4041 Constraint 98 280 5.9906 7.4883 14.9765 0.4041 Constraint 74 572 5.7879 7.2348 14.4697 0.4041 Constraint 74 563 5.6227 7.0284 14.0567 0.4041 Constraint 74 310 6.1691 7.7114 15.4229 0.4041 Constraint 65 579 5.9377 7.4221 14.8442 0.4041 Constraint 65 572 2.0750 2.5937 5.1874 0.4041 Constraint 65 542 5.7934 7.2418 14.4835 0.4041 Constraint 362 665 6.2930 7.8662 15.7324 0.3292 Constraint 153 422 6.1421 7.6776 15.3552 0.3292 Constraint 153 295 6.2367 7.7959 15.5918 0.3292 Constraint 153 289 5.8710 7.3388 14.6776 0.3292 Constraint 146 507 5.6284 7.0355 14.0710 0.3292 Constraint 138 542 6.2577 7.8221 15.6442 0.3292 Constraint 138 507 6.2185 7.7732 15.5463 0.3292 Constraint 138 310 6.2675 7.8344 15.6689 0.3292 Constraint 126 563 3.8449 4.8061 9.6122 0.3292 Constraint 126 542 6.1594 7.6992 15.3985 0.3292 Constraint 146 343 5.2100 6.5126 13.0251 0.2817 Constraint 146 336 3.3867 4.2334 8.4668 0.2817 Constraint 146 331 4.1185 5.1481 10.2963 0.2817 Constraint 146 325 2.2728 2.8410 5.6820 0.2817 Constraint 146 310 6.3590 7.9487 15.8975 0.2817 Constraint 138 635 6.3015 7.8768 15.7536 0.2817 Constraint 635 716 4.4770 5.5962 11.1924 0.2021 Constraint 628 723 4.5282 5.6603 11.3206 0.2021 Constraint 628 716 5.3441 6.6801 13.3602 0.2021 Constraint 619 723 5.8902 7.3628 14.7256 0.2021 Constraint 619 716 5.8170 7.2712 14.5424 0.2021 Constraint 362 716 4.4147 5.5183 11.0366 0.2021 Constraint 352 723 6.0055 7.5068 15.0137 0.2021 Constraint 352 716 6.0113 7.5141 15.0282 0.2021 Constraint 331 723 4.9710 6.2138 12.4275 0.2021 Constraint 331 716 3.6720 4.5900 9.1801 0.2021 Constraint 58 619 4.7070 5.8838 11.7676 0.2021 Constraint 58 598 5.2816 6.6020 13.2040 0.2021 Constraint 58 587 4.3627 5.4533 10.9066 0.2021 Constraint 58 572 5.6915 7.1144 14.2287 0.2021 Constraint 58 563 6.1187 7.6484 15.2968 0.2021 Constraint 211 295 5.9581 7.4476 14.8952 0.1646 Constraint 211 289 6.2403 7.8003 15.6007 0.1646 Constraint 202 507 5.6719 7.0899 14.1798 0.1646 Constraint 194 542 6.3128 7.8910 15.7820 0.1646 Constraint 194 431 6.0920 7.6149 15.2299 0.1646 Constraint 194 310 6.2114 7.7642 15.5285 0.1646 Constraint 182 650 6.3528 7.9410 15.8819 0.1646 Constraint 182 563 3.8820 4.8524 9.7049 0.1646 Constraint 170 608 6.0180 7.5225 15.0449 0.1646 Constraint 170 572 6.3732 7.9665 15.9330 0.1646 Constraint 170 563 5.6515 7.0643 14.1287 0.1646 Constraint 161 572 3.7743 4.7179 9.4358 0.1646 Constraint 153 608 5.4534 6.8167 13.6334 0.1646 Constraint 153 598 5.3356 6.6695 13.3390 0.1646 Constraint 723 729 0.8000 1.0000 2.0000 0.0000 Constraint 716 729 0.8000 1.0000 2.0000 0.0000 Constraint 716 723 0.8000 1.0000 2.0000 0.0000 Constraint 707 729 0.8000 1.0000 2.0000 0.0000 Constraint 707 723 0.8000 1.0000 2.0000 0.0000 Constraint 707 716 0.8000 1.0000 2.0000 0.0000 Constraint 692 729 0.8000 1.0000 2.0000 0.0000 Constraint 692 723 0.8000 1.0000 2.0000 0.0000 Constraint 692 716 0.8000 1.0000 2.0000 0.0000 Constraint 692 707 0.8000 1.0000 2.0000 0.0000 Constraint 681 729 0.8000 1.0000 2.0000 0.0000 Constraint 681 723 0.8000 1.0000 2.0000 0.0000 Constraint 681 716 0.8000 1.0000 2.0000 0.0000 Constraint 681 707 0.8000 1.0000 2.0000 0.0000 Constraint 681 692 0.8000 1.0000 2.0000 0.0000 Constraint 673 729 0.8000 1.0000 2.0000 0.0000 Constraint 673 723 0.8000 1.0000 2.0000 0.0000 Constraint 673 716 0.8000 1.0000 2.0000 0.0000 Constraint 673 707 0.8000 1.0000 2.0000 0.0000 Constraint 673 692 0.8000 1.0000 2.0000 0.0000 Constraint 673 681 0.8000 1.0000 2.0000 0.0000 Constraint 665 729 0.8000 1.0000 2.0000 0.0000 Constraint 665 723 0.8000 1.0000 2.0000 0.0000 Constraint 665 716 0.8000 1.0000 2.0000 0.0000 Constraint 665 707 0.8000 1.0000 2.0000 0.0000 Constraint 665 692 0.8000 1.0000 2.0000 0.0000 Constraint 665 681 0.8000 1.0000 2.0000 0.0000 Constraint 665 673 0.8000 1.0000 2.0000 0.0000 Constraint 658 729 0.8000 1.0000 2.0000 0.0000 Constraint 658 723 0.8000 1.0000 2.0000 0.0000 Constraint 658 716 0.8000 1.0000 2.0000 0.0000 Constraint 658 707 0.8000 1.0000 2.0000 0.0000 Constraint 658 692 0.8000 1.0000 2.0000 0.0000 Constraint 658 681 0.8000 1.0000 2.0000 0.0000 Constraint 658 673 0.8000 1.0000 2.0000 0.0000 Constraint 658 665 0.8000 1.0000 2.0000 0.0000 Constraint 650 729 0.8000 1.0000 2.0000 0.0000 Constraint 650 723 0.8000 1.0000 2.0000 0.0000 Constraint 650 716 0.8000 1.0000 2.0000 0.0000 Constraint 650 707 0.8000 1.0000 2.0000 0.0000 Constraint 650 692 0.8000 1.0000 2.0000 0.0000 Constraint 650 681 0.8000 1.0000 2.0000 0.0000 Constraint 650 673 0.8000 1.0000 2.0000 0.0000 Constraint 650 665 0.8000 1.0000 2.0000 0.0000 Constraint 650 658 0.8000 1.0000 2.0000 0.0000 Constraint 642 729 0.8000 1.0000 2.0000 0.0000 Constraint 642 723 0.8000 1.0000 2.0000 0.0000 Constraint 642 707 0.8000 1.0000 2.0000 0.0000 Constraint 642 692 0.8000 1.0000 2.0000 0.0000 Constraint 642 681 0.8000 1.0000 2.0000 0.0000 Constraint 642 673 0.8000 1.0000 2.0000 0.0000 Constraint 642 665 0.8000 1.0000 2.0000 0.0000 Constraint 642 658 0.8000 1.0000 2.0000 0.0000 Constraint 642 650 0.8000 1.0000 2.0000 0.0000 Constraint 635 729 0.8000 1.0000 2.0000 0.0000 Constraint 635 723 0.8000 1.0000 2.0000 0.0000 Constraint 635 707 0.8000 1.0000 2.0000 0.0000 Constraint 635 692 0.8000 1.0000 2.0000 0.0000 Constraint 635 681 0.8000 1.0000 2.0000 0.0000 Constraint 635 673 0.8000 1.0000 2.0000 0.0000 Constraint 635 665 0.8000 1.0000 2.0000 0.0000 Constraint 635 658 0.8000 1.0000 2.0000 0.0000 Constraint 635 650 0.8000 1.0000 2.0000 0.0000 Constraint 635 642 0.8000 1.0000 2.0000 0.0000 Constraint 628 729 0.8000 1.0000 2.0000 0.0000 Constraint 628 707 0.8000 1.0000 2.0000 0.0000 Constraint 628 692 0.8000 1.0000 2.0000 0.0000 Constraint 628 681 0.8000 1.0000 2.0000 0.0000 Constraint 628 673 0.8000 1.0000 2.0000 0.0000 Constraint 628 665 0.8000 1.0000 2.0000 0.0000 Constraint 628 658 0.8000 1.0000 2.0000 0.0000 Constraint 628 650 0.8000 1.0000 2.0000 0.0000 Constraint 628 642 0.8000 1.0000 2.0000 0.0000 Constraint 628 635 0.8000 1.0000 2.0000 0.0000 Constraint 619 729 0.8000 1.0000 2.0000 0.0000 Constraint 619 707 0.8000 1.0000 2.0000 0.0000 Constraint 619 692 0.8000 1.0000 2.0000 0.0000 Constraint 619 681 0.8000 1.0000 2.0000 0.0000 Constraint 619 673 0.8000 1.0000 2.0000 0.0000 Constraint 619 665 0.8000 1.0000 2.0000 0.0000 Constraint 619 658 0.8000 1.0000 2.0000 0.0000 Constraint 619 650 0.8000 1.0000 2.0000 0.0000 Constraint 619 642 0.8000 1.0000 2.0000 0.0000 Constraint 619 635 0.8000 1.0000 2.0000 0.0000 Constraint 619 628 0.8000 1.0000 2.0000 0.0000 Constraint 608 729 0.8000 1.0000 2.0000 0.0000 Constraint 608 723 0.8000 1.0000 2.0000 0.0000 Constraint 608 716 0.8000 1.0000 2.0000 0.0000 Constraint 608 707 0.8000 1.0000 2.0000 0.0000 Constraint 608 692 0.8000 1.0000 2.0000 0.0000 Constraint 608 681 0.8000 1.0000 2.0000 0.0000 Constraint 608 673 0.8000 1.0000 2.0000 0.0000 Constraint 608 665 0.8000 1.0000 2.0000 0.0000 Constraint 608 658 0.8000 1.0000 2.0000 0.0000 Constraint 608 650 0.8000 1.0000 2.0000 0.0000 Constraint 608 642 0.8000 1.0000 2.0000 0.0000 Constraint 608 635 0.8000 1.0000 2.0000 0.0000 Constraint 608 628 0.8000 1.0000 2.0000 0.0000 Constraint 608 619 0.8000 1.0000 2.0000 0.0000 Constraint 598 729 0.8000 1.0000 2.0000 0.0000 Constraint 598 723 0.8000 1.0000 2.0000 0.0000 Constraint 598 716 0.8000 1.0000 2.0000 0.0000 Constraint 598 707 0.8000 1.0000 2.0000 0.0000 Constraint 598 692 0.8000 1.0000 2.0000 0.0000 Constraint 598 681 0.8000 1.0000 2.0000 0.0000 Constraint 598 673 0.8000 1.0000 2.0000 0.0000 Constraint 598 665 0.8000 1.0000 2.0000 0.0000 Constraint 598 658 0.8000 1.0000 2.0000 0.0000 Constraint 598 650 0.8000 1.0000 2.0000 0.0000 Constraint 598 642 0.8000 1.0000 2.0000 0.0000 Constraint 598 635 0.8000 1.0000 2.0000 0.0000 Constraint 598 628 0.8000 1.0000 2.0000 0.0000 Constraint 598 619 0.8000 1.0000 2.0000 0.0000 Constraint 598 608 0.8000 1.0000 2.0000 0.0000 Constraint 587 729 0.8000 1.0000 2.0000 0.0000 Constraint 587 723 0.8000 1.0000 2.0000 0.0000 Constraint 587 716 0.8000 1.0000 2.0000 0.0000 Constraint 587 707 0.8000 1.0000 2.0000 0.0000 Constraint 587 692 0.8000 1.0000 2.0000 0.0000 Constraint 587 681 0.8000 1.0000 2.0000 0.0000 Constraint 587 673 0.8000 1.0000 2.0000 0.0000 Constraint 587 665 0.8000 1.0000 2.0000 0.0000 Constraint 587 658 0.8000 1.0000 2.0000 0.0000 Constraint 587 650 0.8000 1.0000 2.0000 0.0000 Constraint 587 642 0.8000 1.0000 2.0000 0.0000 Constraint 587 635 0.8000 1.0000 2.0000 0.0000 Constraint 587 628 0.8000 1.0000 2.0000 0.0000 Constraint 587 619 0.8000 1.0000 2.0000 0.0000 Constraint 587 608 0.8000 1.0000 2.0000 0.0000 Constraint 587 598 0.8000 1.0000 2.0000 0.0000 Constraint 579 729 0.8000 1.0000 2.0000 0.0000 Constraint 579 723 0.8000 1.0000 2.0000 0.0000 Constraint 579 716 0.8000 1.0000 2.0000 0.0000 Constraint 579 707 0.8000 1.0000 2.0000 0.0000 Constraint 579 692 0.8000 1.0000 2.0000 0.0000 Constraint 579 681 0.8000 1.0000 2.0000 0.0000 Constraint 579 673 0.8000 1.0000 2.0000 0.0000 Constraint 579 665 0.8000 1.0000 2.0000 0.0000 Constraint 579 642 0.8000 1.0000 2.0000 0.0000 Constraint 579 635 0.8000 1.0000 2.0000 0.0000 Constraint 579 628 0.8000 1.0000 2.0000 0.0000 Constraint 579 619 0.8000 1.0000 2.0000 0.0000 Constraint 579 608 0.8000 1.0000 2.0000 0.0000 Constraint 579 598 0.8000 1.0000 2.0000 0.0000 Constraint 579 587 0.8000 1.0000 2.0000 0.0000 Constraint 572 729 0.8000 1.0000 2.0000 0.0000 Constraint 572 723 0.8000 1.0000 2.0000 0.0000 Constraint 572 716 0.8000 1.0000 2.0000 0.0000 Constraint 572 707 0.8000 1.0000 2.0000 0.0000 Constraint 572 692 0.8000 1.0000 2.0000 0.0000 Constraint 572 681 0.8000 1.0000 2.0000 0.0000 Constraint 572 673 0.8000 1.0000 2.0000 0.0000 Constraint 572 665 0.8000 1.0000 2.0000 0.0000 Constraint 572 658 0.8000 1.0000 2.0000 0.0000 Constraint 572 650 0.8000 1.0000 2.0000 0.0000 Constraint 572 635 0.8000 1.0000 2.0000 0.0000 Constraint 572 628 0.8000 1.0000 2.0000 0.0000 Constraint 572 619 0.8000 1.0000 2.0000 0.0000 Constraint 572 608 0.8000 1.0000 2.0000 0.0000 Constraint 572 598 0.8000 1.0000 2.0000 0.0000 Constraint 572 587 0.8000 1.0000 2.0000 0.0000 Constraint 572 579 0.8000 1.0000 2.0000 0.0000 Constraint 563 729 0.8000 1.0000 2.0000 0.0000 Constraint 563 723 0.8000 1.0000 2.0000 0.0000 Constraint 563 716 0.8000 1.0000 2.0000 0.0000 Constraint 563 707 0.8000 1.0000 2.0000 0.0000 Constraint 563 692 0.8000 1.0000 2.0000 0.0000 Constraint 563 681 0.8000 1.0000 2.0000 0.0000 Constraint 563 673 0.8000 1.0000 2.0000 0.0000 Constraint 563 665 0.8000 1.0000 2.0000 0.0000 Constraint 563 628 0.8000 1.0000 2.0000 0.0000 Constraint 563 619 0.8000 1.0000 2.0000 0.0000 Constraint 563 608 0.8000 1.0000 2.0000 0.0000 Constraint 563 598 0.8000 1.0000 2.0000 0.0000 Constraint 563 587 0.8000 1.0000 2.0000 0.0000 Constraint 563 579 0.8000 1.0000 2.0000 0.0000 Constraint 563 572 0.8000 1.0000 2.0000 0.0000 Constraint 556 729 0.8000 1.0000 2.0000 0.0000 Constraint 556 723 0.8000 1.0000 2.0000 0.0000 Constraint 556 716 0.8000 1.0000 2.0000 0.0000 Constraint 556 707 0.8000 1.0000 2.0000 0.0000 Constraint 556 692 0.8000 1.0000 2.0000 0.0000 Constraint 556 681 0.8000 1.0000 2.0000 0.0000 Constraint 556 673 0.8000 1.0000 2.0000 0.0000 Constraint 556 665 0.8000 1.0000 2.0000 0.0000 Constraint 556 628 0.8000 1.0000 2.0000 0.0000 Constraint 556 619 0.8000 1.0000 2.0000 0.0000 Constraint 556 608 0.8000 1.0000 2.0000 0.0000 Constraint 556 598 0.8000 1.0000 2.0000 0.0000 Constraint 556 587 0.8000 1.0000 2.0000 0.0000 Constraint 556 579 0.8000 1.0000 2.0000 0.0000 Constraint 556 572 0.8000 1.0000 2.0000 0.0000 Constraint 556 563 0.8000 1.0000 2.0000 0.0000 Constraint 551 729 0.8000 1.0000 2.0000 0.0000 Constraint 551 723 0.8000 1.0000 2.0000 0.0000 Constraint 551 716 0.8000 1.0000 2.0000 0.0000 Constraint 551 707 0.8000 1.0000 2.0000 0.0000 Constraint 551 692 0.8000 1.0000 2.0000 0.0000 Constraint 551 681 0.8000 1.0000 2.0000 0.0000 Constraint 551 673 0.8000 1.0000 2.0000 0.0000 Constraint 551 665 0.8000 1.0000 2.0000 0.0000 Constraint 551 650 0.8000 1.0000 2.0000 0.0000 Constraint 551 642 0.8000 1.0000 2.0000 0.0000 Constraint 551 628 0.8000 1.0000 2.0000 0.0000 Constraint 551 619 0.8000 1.0000 2.0000 0.0000 Constraint 551 608 0.8000 1.0000 2.0000 0.0000 Constraint 551 598 0.8000 1.0000 2.0000 0.0000 Constraint 551 587 0.8000 1.0000 2.0000 0.0000 Constraint 551 579 0.8000 1.0000 2.0000 0.0000 Constraint 551 572 0.8000 1.0000 2.0000 0.0000 Constraint 551 563 0.8000 1.0000 2.0000 0.0000 Constraint 551 556 0.8000 1.0000 2.0000 0.0000 Constraint 542 729 0.8000 1.0000 2.0000 0.0000 Constraint 542 723 0.8000 1.0000 2.0000 0.0000 Constraint 542 716 0.8000 1.0000 2.0000 0.0000 Constraint 542 707 0.8000 1.0000 2.0000 0.0000 Constraint 542 692 0.8000 1.0000 2.0000 0.0000 Constraint 542 681 0.8000 1.0000 2.0000 0.0000 Constraint 542 673 0.8000 1.0000 2.0000 0.0000 Constraint 542 665 0.8000 1.0000 2.0000 0.0000 Constraint 542 650 0.8000 1.0000 2.0000 0.0000 Constraint 542 642 0.8000 1.0000 2.0000 0.0000 Constraint 542 635 0.8000 1.0000 2.0000 0.0000 Constraint 542 628 0.8000 1.0000 2.0000 0.0000 Constraint 542 619 0.8000 1.0000 2.0000 0.0000 Constraint 542 608 0.8000 1.0000 2.0000 0.0000 Constraint 542 598 0.8000 1.0000 2.0000 0.0000 Constraint 542 587 0.8000 1.0000 2.0000 0.0000 Constraint 542 579 0.8000 1.0000 2.0000 0.0000 Constraint 542 572 0.8000 1.0000 2.0000 0.0000 Constraint 542 563 0.8000 1.0000 2.0000 0.0000 Constraint 542 556 0.8000 1.0000 2.0000 0.0000 Constraint 542 551 0.8000 1.0000 2.0000 0.0000 Constraint 533 729 0.8000 1.0000 2.0000 0.0000 Constraint 533 723 0.8000 1.0000 2.0000 0.0000 Constraint 533 716 0.8000 1.0000 2.0000 0.0000 Constraint 533 707 0.8000 1.0000 2.0000 0.0000 Constraint 533 692 0.8000 1.0000 2.0000 0.0000 Constraint 533 681 0.8000 1.0000 2.0000 0.0000 Constraint 533 673 0.8000 1.0000 2.0000 0.0000 Constraint 533 665 0.8000 1.0000 2.0000 0.0000 Constraint 533 658 0.8000 1.0000 2.0000 0.0000 Constraint 533 650 0.8000 1.0000 2.0000 0.0000 Constraint 533 642 0.8000 1.0000 2.0000 0.0000 Constraint 533 628 0.8000 1.0000 2.0000 0.0000 Constraint 533 619 0.8000 1.0000 2.0000 0.0000 Constraint 533 608 0.8000 1.0000 2.0000 0.0000 Constraint 533 598 0.8000 1.0000 2.0000 0.0000 Constraint 533 587 0.8000 1.0000 2.0000 0.0000 Constraint 533 579 0.8000 1.0000 2.0000 0.0000 Constraint 533 572 0.8000 1.0000 2.0000 0.0000 Constraint 533 563 0.8000 1.0000 2.0000 0.0000 Constraint 533 556 0.8000 1.0000 2.0000 0.0000 Constraint 533 551 0.8000 1.0000 2.0000 0.0000 Constraint 533 542 0.8000 1.0000 2.0000 0.0000 Constraint 525 729 0.8000 1.0000 2.0000 0.0000 Constraint 525 723 0.8000 1.0000 2.0000 0.0000 Constraint 525 716 0.8000 1.0000 2.0000 0.0000 Constraint 525 707 0.8000 1.0000 2.0000 0.0000 Constraint 525 692 0.8000 1.0000 2.0000 0.0000 Constraint 525 681 0.8000 1.0000 2.0000 0.0000 Constraint 525 673 0.8000 1.0000 2.0000 0.0000 Constraint 525 665 0.8000 1.0000 2.0000 0.0000 Constraint 525 658 0.8000 1.0000 2.0000 0.0000 Constraint 525 650 0.8000 1.0000 2.0000 0.0000 Constraint 525 642 0.8000 1.0000 2.0000 0.0000 Constraint 525 635 0.8000 1.0000 2.0000 0.0000 Constraint 525 628 0.8000 1.0000 2.0000 0.0000 Constraint 525 619 0.8000 1.0000 2.0000 0.0000 Constraint 525 608 0.8000 1.0000 2.0000 0.0000 Constraint 525 598 0.8000 1.0000 2.0000 0.0000 Constraint 525 587 0.8000 1.0000 2.0000 0.0000 Constraint 525 579 0.8000 1.0000 2.0000 0.0000 Constraint 525 572 0.8000 1.0000 2.0000 0.0000 Constraint 525 563 0.8000 1.0000 2.0000 0.0000 Constraint 525 556 0.8000 1.0000 2.0000 0.0000 Constraint 525 551 0.8000 1.0000 2.0000 0.0000 Constraint 525 542 0.8000 1.0000 2.0000 0.0000 Constraint 525 533 0.8000 1.0000 2.0000 0.0000 Constraint 518 729 0.8000 1.0000 2.0000 0.0000 Constraint 518 723 0.8000 1.0000 2.0000 0.0000 Constraint 518 716 0.8000 1.0000 2.0000 0.0000 Constraint 518 707 0.8000 1.0000 2.0000 0.0000 Constraint 518 692 0.8000 1.0000 2.0000 0.0000 Constraint 518 681 0.8000 1.0000 2.0000 0.0000 Constraint 518 673 0.8000 1.0000 2.0000 0.0000 Constraint 518 665 0.8000 1.0000 2.0000 0.0000 Constraint 518 658 0.8000 1.0000 2.0000 0.0000 Constraint 518 650 0.8000 1.0000 2.0000 0.0000 Constraint 518 642 0.8000 1.0000 2.0000 0.0000 Constraint 518 635 0.8000 1.0000 2.0000 0.0000 Constraint 518 628 0.8000 1.0000 2.0000 0.0000 Constraint 518 619 0.8000 1.0000 2.0000 0.0000 Constraint 518 608 0.8000 1.0000 2.0000 0.0000 Constraint 518 598 0.8000 1.0000 2.0000 0.0000 Constraint 518 587 0.8000 1.0000 2.0000 0.0000 Constraint 518 579 0.8000 1.0000 2.0000 0.0000 Constraint 518 572 0.8000 1.0000 2.0000 0.0000 Constraint 518 563 0.8000 1.0000 2.0000 0.0000 Constraint 518 556 0.8000 1.0000 2.0000 0.0000 Constraint 518 551 0.8000 1.0000 2.0000 0.0000 Constraint 518 542 0.8000 1.0000 2.0000 0.0000 Constraint 518 533 0.8000 1.0000 2.0000 0.0000 Constraint 518 525 0.8000 1.0000 2.0000 0.0000 Constraint 507 729 0.8000 1.0000 2.0000 0.0000 Constraint 507 723 0.8000 1.0000 2.0000 0.0000 Constraint 507 716 0.8000 1.0000 2.0000 0.0000 Constraint 507 707 0.8000 1.0000 2.0000 0.0000 Constraint 507 692 0.8000 1.0000 2.0000 0.0000 Constraint 507 681 0.8000 1.0000 2.0000 0.0000 Constraint 507 673 0.8000 1.0000 2.0000 0.0000 Constraint 507 665 0.8000 1.0000 2.0000 0.0000 Constraint 507 658 0.8000 1.0000 2.0000 0.0000 Constraint 507 650 0.8000 1.0000 2.0000 0.0000 Constraint 507 642 0.8000 1.0000 2.0000 0.0000 Constraint 507 635 0.8000 1.0000 2.0000 0.0000 Constraint 507 628 0.8000 1.0000 2.0000 0.0000 Constraint 507 619 0.8000 1.0000 2.0000 0.0000 Constraint 507 608 0.8000 1.0000 2.0000 0.0000 Constraint 507 598 0.8000 1.0000 2.0000 0.0000 Constraint 507 572 0.8000 1.0000 2.0000 0.0000 Constraint 507 563 0.8000 1.0000 2.0000 0.0000 Constraint 507 556 0.8000 1.0000 2.0000 0.0000 Constraint 507 551 0.8000 1.0000 2.0000 0.0000 Constraint 507 542 0.8000 1.0000 2.0000 0.0000 Constraint 507 533 0.8000 1.0000 2.0000 0.0000 Constraint 507 525 0.8000 1.0000 2.0000 0.0000 Constraint 507 518 0.8000 1.0000 2.0000 0.0000 Constraint 494 716 0.8000 1.0000 2.0000 0.0000 Constraint 494 707 0.8000 1.0000 2.0000 0.0000 Constraint 494 681 0.8000 1.0000 2.0000 0.0000 Constraint 494 665 0.8000 1.0000 2.0000 0.0000 Constraint 494 658 0.8000 1.0000 2.0000 0.0000 Constraint 494 650 0.8000 1.0000 2.0000 0.0000 Constraint 494 642 0.8000 1.0000 2.0000 0.0000 Constraint 494 635 0.8000 1.0000 2.0000 0.0000 Constraint 494 628 0.8000 1.0000 2.0000 0.0000 Constraint 494 619 0.8000 1.0000 2.0000 0.0000 Constraint 494 608 0.8000 1.0000 2.0000 0.0000 Constraint 494 598 0.8000 1.0000 2.0000 0.0000 Constraint 494 587 0.8000 1.0000 2.0000 0.0000 Constraint 494 579 0.8000 1.0000 2.0000 0.0000 Constraint 494 563 0.8000 1.0000 2.0000 0.0000 Constraint 494 556 0.8000 1.0000 2.0000 0.0000 Constraint 494 551 0.8000 1.0000 2.0000 0.0000 Constraint 494 542 0.8000 1.0000 2.0000 0.0000 Constraint 494 533 0.8000 1.0000 2.0000 0.0000 Constraint 494 525 0.8000 1.0000 2.0000 0.0000 Constraint 494 518 0.8000 1.0000 2.0000 0.0000 Constraint 494 507 0.8000 1.0000 2.0000 0.0000 Constraint 486 729 0.8000 1.0000 2.0000 0.0000 Constraint 486 723 0.8000 1.0000 2.0000 0.0000 Constraint 486 716 0.8000 1.0000 2.0000 0.0000 Constraint 486 707 0.8000 1.0000 2.0000 0.0000 Constraint 486 692 0.8000 1.0000 2.0000 0.0000 Constraint 486 681 0.8000 1.0000 2.0000 0.0000 Constraint 486 673 0.8000 1.0000 2.0000 0.0000 Constraint 486 665 0.8000 1.0000 2.0000 0.0000 Constraint 486 642 0.8000 1.0000 2.0000 0.0000 Constraint 486 635 0.8000 1.0000 2.0000 0.0000 Constraint 486 628 0.8000 1.0000 2.0000 0.0000 Constraint 486 619 0.8000 1.0000 2.0000 0.0000 Constraint 486 598 0.8000 1.0000 2.0000 0.0000 Constraint 486 587 0.8000 1.0000 2.0000 0.0000 Constraint 486 563 0.8000 1.0000 2.0000 0.0000 Constraint 486 551 0.8000 1.0000 2.0000 0.0000 Constraint 486 542 0.8000 1.0000 2.0000 0.0000 Constraint 486 533 0.8000 1.0000 2.0000 0.0000 Constraint 486 525 0.8000 1.0000 2.0000 0.0000 Constraint 486 518 0.8000 1.0000 2.0000 0.0000 Constraint 486 507 0.8000 1.0000 2.0000 0.0000 Constraint 486 494 0.8000 1.0000 2.0000 0.0000 Constraint 478 729 0.8000 1.0000 2.0000 0.0000 Constraint 478 723 0.8000 1.0000 2.0000 0.0000 Constraint 478 716 0.8000 1.0000 2.0000 0.0000 Constraint 478 707 0.8000 1.0000 2.0000 0.0000 Constraint 478 692 0.8000 1.0000 2.0000 0.0000 Constraint 478 681 0.8000 1.0000 2.0000 0.0000 Constraint 478 650 0.8000 1.0000 2.0000 0.0000 Constraint 478 642 0.8000 1.0000 2.0000 0.0000 Constraint 478 635 0.8000 1.0000 2.0000 0.0000 Constraint 478 628 0.8000 1.0000 2.0000 0.0000 Constraint 478 619 0.8000 1.0000 2.0000 0.0000 Constraint 478 608 0.8000 1.0000 2.0000 0.0000 Constraint 478 598 0.8000 1.0000 2.0000 0.0000 Constraint 478 587 0.8000 1.0000 2.0000 0.0000 Constraint 478 579 0.8000 1.0000 2.0000 0.0000 Constraint 478 572 0.8000 1.0000 2.0000 0.0000 Constraint 478 563 0.8000 1.0000 2.0000 0.0000 Constraint 478 556 0.8000 1.0000 2.0000 0.0000 Constraint 478 542 0.8000 1.0000 2.0000 0.0000 Constraint 478 533 0.8000 1.0000 2.0000 0.0000 Constraint 478 525 0.8000 1.0000 2.0000 0.0000 Constraint 478 518 0.8000 1.0000 2.0000 0.0000 Constraint 478 507 0.8000 1.0000 2.0000 0.0000 Constraint 478 494 0.8000 1.0000 2.0000 0.0000 Constraint 478 486 0.8000 1.0000 2.0000 0.0000 Constraint 471 729 0.8000 1.0000 2.0000 0.0000 Constraint 471 723 0.8000 1.0000 2.0000 0.0000 Constraint 471 716 0.8000 1.0000 2.0000 0.0000 Constraint 471 707 0.8000 1.0000 2.0000 0.0000 Constraint 471 692 0.8000 1.0000 2.0000 0.0000 Constraint 471 681 0.8000 1.0000 2.0000 0.0000 Constraint 471 673 0.8000 1.0000 2.0000 0.0000 Constraint 471 665 0.8000 1.0000 2.0000 0.0000 Constraint 471 658 0.8000 1.0000 2.0000 0.0000 Constraint 471 650 0.8000 1.0000 2.0000 0.0000 Constraint 471 642 0.8000 1.0000 2.0000 0.0000 Constraint 471 635 0.8000 1.0000 2.0000 0.0000 Constraint 471 628 0.8000 1.0000 2.0000 0.0000 Constraint 471 619 0.8000 1.0000 2.0000 0.0000 Constraint 471 587 0.8000 1.0000 2.0000 0.0000 Constraint 471 533 0.8000 1.0000 2.0000 0.0000 Constraint 471 525 0.8000 1.0000 2.0000 0.0000 Constraint 471 518 0.8000 1.0000 2.0000 0.0000 Constraint 471 507 0.8000 1.0000 2.0000 0.0000 Constraint 471 494 0.8000 1.0000 2.0000 0.0000 Constraint 471 486 0.8000 1.0000 2.0000 0.0000 Constraint 471 478 0.8000 1.0000 2.0000 0.0000 Constraint 459 729 0.8000 1.0000 2.0000 0.0000 Constraint 459 723 0.8000 1.0000 2.0000 0.0000 Constraint 459 716 0.8000 1.0000 2.0000 0.0000 Constraint 459 707 0.8000 1.0000 2.0000 0.0000 Constraint 459 692 0.8000 1.0000 2.0000 0.0000 Constraint 459 681 0.8000 1.0000 2.0000 0.0000 Constraint 459 673 0.8000 1.0000 2.0000 0.0000 Constraint 459 542 0.8000 1.0000 2.0000 0.0000 Constraint 459 533 0.8000 1.0000 2.0000 0.0000 Constraint 459 518 0.8000 1.0000 2.0000 0.0000 Constraint 459 507 0.8000 1.0000 2.0000 0.0000 Constraint 459 494 0.8000 1.0000 2.0000 0.0000 Constraint 459 486 0.8000 1.0000 2.0000 0.0000 Constraint 459 478 0.8000 1.0000 2.0000 0.0000 Constraint 459 471 0.8000 1.0000 2.0000 0.0000 Constraint 452 729 0.8000 1.0000 2.0000 0.0000 Constraint 452 723 0.8000 1.0000 2.0000 0.0000 Constraint 452 716 0.8000 1.0000 2.0000 0.0000 Constraint 452 707 0.8000 1.0000 2.0000 0.0000 Constraint 452 692 0.8000 1.0000 2.0000 0.0000 Constraint 452 681 0.8000 1.0000 2.0000 0.0000 Constraint 452 628 0.8000 1.0000 2.0000 0.0000 Constraint 452 619 0.8000 1.0000 2.0000 0.0000 Constraint 452 587 0.8000 1.0000 2.0000 0.0000 Constraint 452 518 0.8000 1.0000 2.0000 0.0000 Constraint 452 507 0.8000 1.0000 2.0000 0.0000 Constraint 452 494 0.8000 1.0000 2.0000 0.0000 Constraint 452 486 0.8000 1.0000 2.0000 0.0000 Constraint 452 478 0.8000 1.0000 2.0000 0.0000 Constraint 452 471 0.8000 1.0000 2.0000 0.0000 Constraint 452 459 0.8000 1.0000 2.0000 0.0000 Constraint 447 729 0.8000 1.0000 2.0000 0.0000 Constraint 447 723 0.8000 1.0000 2.0000 0.0000 Constraint 447 707 0.8000 1.0000 2.0000 0.0000 Constraint 447 635 0.8000 1.0000 2.0000 0.0000 Constraint 447 628 0.8000 1.0000 2.0000 0.0000 Constraint 447 619 0.8000 1.0000 2.0000 0.0000 Constraint 447 608 0.8000 1.0000 2.0000 0.0000 Constraint 447 598 0.8000 1.0000 2.0000 0.0000 Constraint 447 587 0.8000 1.0000 2.0000 0.0000 Constraint 447 579 0.8000 1.0000 2.0000 0.0000 Constraint 447 556 0.8000 1.0000 2.0000 0.0000 Constraint 447 551 0.8000 1.0000 2.0000 0.0000 Constraint 447 542 0.8000 1.0000 2.0000 0.0000 Constraint 447 533 0.8000 1.0000 2.0000 0.0000 Constraint 447 525 0.8000 1.0000 2.0000 0.0000 Constraint 447 518 0.8000 1.0000 2.0000 0.0000 Constraint 447 507 0.8000 1.0000 2.0000 0.0000 Constraint 447 494 0.8000 1.0000 2.0000 0.0000 Constraint 447 486 0.8000 1.0000 2.0000 0.0000 Constraint 447 478 0.8000 1.0000 2.0000 0.0000 Constraint 447 471 0.8000 1.0000 2.0000 0.0000 Constraint 447 459 0.8000 1.0000 2.0000 0.0000 Constraint 447 452 0.8000 1.0000 2.0000 0.0000 Constraint 439 707 0.8000 1.0000 2.0000 0.0000 Constraint 439 642 0.8000 1.0000 2.0000 0.0000 Constraint 439 635 0.8000 1.0000 2.0000 0.0000 Constraint 439 619 0.8000 1.0000 2.0000 0.0000 Constraint 439 608 0.8000 1.0000 2.0000 0.0000 Constraint 439 598 0.8000 1.0000 2.0000 0.0000 Constraint 439 563 0.8000 1.0000 2.0000 0.0000 Constraint 439 556 0.8000 1.0000 2.0000 0.0000 Constraint 439 551 0.8000 1.0000 2.0000 0.0000 Constraint 439 542 0.8000 1.0000 2.0000 0.0000 Constraint 439 533 0.8000 1.0000 2.0000 0.0000 Constraint 439 525 0.8000 1.0000 2.0000 0.0000 Constraint 439 518 0.8000 1.0000 2.0000 0.0000 Constraint 439 507 0.8000 1.0000 2.0000 0.0000 Constraint 439 494 0.8000 1.0000 2.0000 0.0000 Constraint 439 486 0.8000 1.0000 2.0000 0.0000 Constraint 439 478 0.8000 1.0000 2.0000 0.0000 Constraint 439 471 0.8000 1.0000 2.0000 0.0000 Constraint 439 459 0.8000 1.0000 2.0000 0.0000 Constraint 439 452 0.8000 1.0000 2.0000 0.0000 Constraint 439 447 0.8000 1.0000 2.0000 0.0000 Constraint 431 729 0.8000 1.0000 2.0000 0.0000 Constraint 431 723 0.8000 1.0000 2.0000 0.0000 Constraint 431 716 0.8000 1.0000 2.0000 0.0000 Constraint 431 707 0.8000 1.0000 2.0000 0.0000 Constraint 431 692 0.8000 1.0000 2.0000 0.0000 Constraint 431 642 0.8000 1.0000 2.0000 0.0000 Constraint 431 635 0.8000 1.0000 2.0000 0.0000 Constraint 431 628 0.8000 1.0000 2.0000 0.0000 Constraint 431 619 0.8000 1.0000 2.0000 0.0000 Constraint 431 608 0.8000 1.0000 2.0000 0.0000 Constraint 431 598 0.8000 1.0000 2.0000 0.0000 Constraint 431 587 0.8000 1.0000 2.0000 0.0000 Constraint 431 556 0.8000 1.0000 2.0000 0.0000 Constraint 431 542 0.8000 1.0000 2.0000 0.0000 Constraint 431 525 0.8000 1.0000 2.0000 0.0000 Constraint 431 518 0.8000 1.0000 2.0000 0.0000 Constraint 431 486 0.8000 1.0000 2.0000 0.0000 Constraint 431 478 0.8000 1.0000 2.0000 0.0000 Constraint 431 471 0.8000 1.0000 2.0000 0.0000 Constraint 431 459 0.8000 1.0000 2.0000 0.0000 Constraint 431 452 0.8000 1.0000 2.0000 0.0000 Constraint 431 447 0.8000 1.0000 2.0000 0.0000 Constraint 431 439 0.8000 1.0000 2.0000 0.0000 Constraint 422 729 0.8000 1.0000 2.0000 0.0000 Constraint 422 658 0.8000 1.0000 2.0000 0.0000 Constraint 422 650 0.8000 1.0000 2.0000 0.0000 Constraint 422 642 0.8000 1.0000 2.0000 0.0000 Constraint 422 635 0.8000 1.0000 2.0000 0.0000 Constraint 422 628 0.8000 1.0000 2.0000 0.0000 Constraint 422 619 0.8000 1.0000 2.0000 0.0000 Constraint 422 608 0.8000 1.0000 2.0000 0.0000 Constraint 422 598 0.8000 1.0000 2.0000 0.0000 Constraint 422 572 0.8000 1.0000 2.0000 0.0000 Constraint 422 563 0.8000 1.0000 2.0000 0.0000 Constraint 422 556 0.8000 1.0000 2.0000 0.0000 Constraint 422 551 0.8000 1.0000 2.0000 0.0000 Constraint 422 542 0.8000 1.0000 2.0000 0.0000 Constraint 422 533 0.8000 1.0000 2.0000 0.0000 Constraint 422 525 0.8000 1.0000 2.0000 0.0000 Constraint 422 518 0.8000 1.0000 2.0000 0.0000 Constraint 422 507 0.8000 1.0000 2.0000 0.0000 Constraint 422 486 0.8000 1.0000 2.0000 0.0000 Constraint 422 478 0.8000 1.0000 2.0000 0.0000 Constraint 422 471 0.8000 1.0000 2.0000 0.0000 Constraint 422 459 0.8000 1.0000 2.0000 0.0000 Constraint 422 452 0.8000 1.0000 2.0000 0.0000 Constraint 422 447 0.8000 1.0000 2.0000 0.0000 Constraint 422 439 0.8000 1.0000 2.0000 0.0000 Constraint 422 431 0.8000 1.0000 2.0000 0.0000 Constraint 414 729 0.8000 1.0000 2.0000 0.0000 Constraint 414 716 0.8000 1.0000 2.0000 0.0000 Constraint 414 658 0.8000 1.0000 2.0000 0.0000 Constraint 414 642 0.8000 1.0000 2.0000 0.0000 Constraint 414 635 0.8000 1.0000 2.0000 0.0000 Constraint 414 628 0.8000 1.0000 2.0000 0.0000 Constraint 414 619 0.8000 1.0000 2.0000 0.0000 Constraint 414 608 0.8000 1.0000 2.0000 0.0000 Constraint 414 572 0.8000 1.0000 2.0000 0.0000 Constraint 414 563 0.8000 1.0000 2.0000 0.0000 Constraint 414 556 0.8000 1.0000 2.0000 0.0000 Constraint 414 551 0.8000 1.0000 2.0000 0.0000 Constraint 414 542 0.8000 1.0000 2.0000 0.0000 Constraint 414 533 0.8000 1.0000 2.0000 0.0000 Constraint 414 525 0.8000 1.0000 2.0000 0.0000 Constraint 414 518 0.8000 1.0000 2.0000 0.0000 Constraint 414 507 0.8000 1.0000 2.0000 0.0000 Constraint 414 494 0.8000 1.0000 2.0000 0.0000 Constraint 414 486 0.8000 1.0000 2.0000 0.0000 Constraint 414 478 0.8000 1.0000 2.0000 0.0000 Constraint 414 471 0.8000 1.0000 2.0000 0.0000 Constraint 414 459 0.8000 1.0000 2.0000 0.0000 Constraint 414 452 0.8000 1.0000 2.0000 0.0000 Constraint 414 447 0.8000 1.0000 2.0000 0.0000 Constraint 414 439 0.8000 1.0000 2.0000 0.0000 Constraint 414 431 0.8000 1.0000 2.0000 0.0000 Constraint 414 422 0.8000 1.0000 2.0000 0.0000 Constraint 402 729 0.8000 1.0000 2.0000 0.0000 Constraint 402 707 0.8000 1.0000 2.0000 0.0000 Constraint 402 673 0.8000 1.0000 2.0000 0.0000 Constraint 402 665 0.8000 1.0000 2.0000 0.0000 Constraint 402 658 0.8000 1.0000 2.0000 0.0000 Constraint 402 650 0.8000 1.0000 2.0000 0.0000 Constraint 402 642 0.8000 1.0000 2.0000 0.0000 Constraint 402 635 0.8000 1.0000 2.0000 0.0000 Constraint 402 628 0.8000 1.0000 2.0000 0.0000 Constraint 402 619 0.8000 1.0000 2.0000 0.0000 Constraint 402 608 0.8000 1.0000 2.0000 0.0000 Constraint 402 598 0.8000 1.0000 2.0000 0.0000 Constraint 402 587 0.8000 1.0000 2.0000 0.0000 Constraint 402 579 0.8000 1.0000 2.0000 0.0000 Constraint 402 572 0.8000 1.0000 2.0000 0.0000 Constraint 402 563 0.8000 1.0000 2.0000 0.0000 Constraint 402 556 0.8000 1.0000 2.0000 0.0000 Constraint 402 551 0.8000 1.0000 2.0000 0.0000 Constraint 402 542 0.8000 1.0000 2.0000 0.0000 Constraint 402 533 0.8000 1.0000 2.0000 0.0000 Constraint 402 525 0.8000 1.0000 2.0000 0.0000 Constraint 402 518 0.8000 1.0000 2.0000 0.0000 Constraint 402 507 0.8000 1.0000 2.0000 0.0000 Constraint 402 494 0.8000 1.0000 2.0000 0.0000 Constraint 402 486 0.8000 1.0000 2.0000 0.0000 Constraint 402 478 0.8000 1.0000 2.0000 0.0000 Constraint 402 471 0.8000 1.0000 2.0000 0.0000 Constraint 402 459 0.8000 1.0000 2.0000 0.0000 Constraint 402 452 0.8000 1.0000 2.0000 0.0000 Constraint 402 447 0.8000 1.0000 2.0000 0.0000 Constraint 402 439 0.8000 1.0000 2.0000 0.0000 Constraint 402 431 0.8000 1.0000 2.0000 0.0000 Constraint 402 422 0.8000 1.0000 2.0000 0.0000 Constraint 402 414 0.8000 1.0000 2.0000 0.0000 Constraint 393 729 0.8000 1.0000 2.0000 0.0000 Constraint 393 658 0.8000 1.0000 2.0000 0.0000 Constraint 393 650 0.8000 1.0000 2.0000 0.0000 Constraint 393 642 0.8000 1.0000 2.0000 0.0000 Constraint 393 635 0.8000 1.0000 2.0000 0.0000 Constraint 393 628 0.8000 1.0000 2.0000 0.0000 Constraint 393 619 0.8000 1.0000 2.0000 0.0000 Constraint 393 608 0.8000 1.0000 2.0000 0.0000 Constraint 393 587 0.8000 1.0000 2.0000 0.0000 Constraint 393 579 0.8000 1.0000 2.0000 0.0000 Constraint 393 572 0.8000 1.0000 2.0000 0.0000 Constraint 393 563 0.8000 1.0000 2.0000 0.0000 Constraint 393 556 0.8000 1.0000 2.0000 0.0000 Constraint 393 551 0.8000 1.0000 2.0000 0.0000 Constraint 393 542 0.8000 1.0000 2.0000 0.0000 Constraint 393 533 0.8000 1.0000 2.0000 0.0000 Constraint 393 525 0.8000 1.0000 2.0000 0.0000 Constraint 393 518 0.8000 1.0000 2.0000 0.0000 Constraint 393 507 0.8000 1.0000 2.0000 0.0000 Constraint 393 494 0.8000 1.0000 2.0000 0.0000 Constraint 393 486 0.8000 1.0000 2.0000 0.0000 Constraint 393 478 0.8000 1.0000 2.0000 0.0000 Constraint 393 471 0.8000 1.0000 2.0000 0.0000 Constraint 393 459 0.8000 1.0000 2.0000 0.0000 Constraint 393 452 0.8000 1.0000 2.0000 0.0000 Constraint 393 447 0.8000 1.0000 2.0000 0.0000 Constraint 393 439 0.8000 1.0000 2.0000 0.0000 Constraint 393 431 0.8000 1.0000 2.0000 0.0000 Constraint 393 422 0.8000 1.0000 2.0000 0.0000 Constraint 393 414 0.8000 1.0000 2.0000 0.0000 Constraint 393 402 0.8000 1.0000 2.0000 0.0000 Constraint 385 729 0.8000 1.0000 2.0000 0.0000 Constraint 385 723 0.8000 1.0000 2.0000 0.0000 Constraint 385 716 0.8000 1.0000 2.0000 0.0000 Constraint 385 692 0.8000 1.0000 2.0000 0.0000 Constraint 385 642 0.8000 1.0000 2.0000 0.0000 Constraint 385 635 0.8000 1.0000 2.0000 0.0000 Constraint 385 628 0.8000 1.0000 2.0000 0.0000 Constraint 385 619 0.8000 1.0000 2.0000 0.0000 Constraint 385 608 0.8000 1.0000 2.0000 0.0000 Constraint 385 598 0.8000 1.0000 2.0000 0.0000 Constraint 385 587 0.8000 1.0000 2.0000 0.0000 Constraint 385 572 0.8000 1.0000 2.0000 0.0000 Constraint 385 556 0.8000 1.0000 2.0000 0.0000 Constraint 385 551 0.8000 1.0000 2.0000 0.0000 Constraint 385 542 0.8000 1.0000 2.0000 0.0000 Constraint 385 533 0.8000 1.0000 2.0000 0.0000 Constraint 385 525 0.8000 1.0000 2.0000 0.0000 Constraint 385 518 0.8000 1.0000 2.0000 0.0000 Constraint 385 507 0.8000 1.0000 2.0000 0.0000 Constraint 385 494 0.8000 1.0000 2.0000 0.0000 Constraint 385 486 0.8000 1.0000 2.0000 0.0000 Constraint 385 478 0.8000 1.0000 2.0000 0.0000 Constraint 385 471 0.8000 1.0000 2.0000 0.0000 Constraint 385 459 0.8000 1.0000 2.0000 0.0000 Constraint 385 452 0.8000 1.0000 2.0000 0.0000 Constraint 385 447 0.8000 1.0000 2.0000 0.0000 Constraint 385 439 0.8000 1.0000 2.0000 0.0000 Constraint 385 431 0.8000 1.0000 2.0000 0.0000 Constraint 385 422 0.8000 1.0000 2.0000 0.0000 Constraint 385 414 0.8000 1.0000 2.0000 0.0000 Constraint 385 402 0.8000 1.0000 2.0000 0.0000 Constraint 385 393 0.8000 1.0000 2.0000 0.0000 Constraint 374 729 0.8000 1.0000 2.0000 0.0000 Constraint 374 723 0.8000 1.0000 2.0000 0.0000 Constraint 374 716 0.8000 1.0000 2.0000 0.0000 Constraint 374 707 0.8000 1.0000 2.0000 0.0000 Constraint 374 692 0.8000 1.0000 2.0000 0.0000 Constraint 374 642 0.8000 1.0000 2.0000 0.0000 Constraint 374 635 0.8000 1.0000 2.0000 0.0000 Constraint 374 628 0.8000 1.0000 2.0000 0.0000 Constraint 374 619 0.8000 1.0000 2.0000 0.0000 Constraint 374 608 0.8000 1.0000 2.0000 0.0000 Constraint 374 598 0.8000 1.0000 2.0000 0.0000 Constraint 374 587 0.8000 1.0000 2.0000 0.0000 Constraint 374 579 0.8000 1.0000 2.0000 0.0000 Constraint 374 572 0.8000 1.0000 2.0000 0.0000 Constraint 374 563 0.8000 1.0000 2.0000 0.0000 Constraint 374 556 0.8000 1.0000 2.0000 0.0000 Constraint 374 551 0.8000 1.0000 2.0000 0.0000 Constraint 374 542 0.8000 1.0000 2.0000 0.0000 Constraint 374 533 0.8000 1.0000 2.0000 0.0000 Constraint 374 525 0.8000 1.0000 2.0000 0.0000 Constraint 374 518 0.8000 1.0000 2.0000 0.0000 Constraint 374 507 0.8000 1.0000 2.0000 0.0000 Constraint 374 494 0.8000 1.0000 2.0000 0.0000 Constraint 374 486 0.8000 1.0000 2.0000 0.0000 Constraint 374 478 0.8000 1.0000 2.0000 0.0000 Constraint 374 471 0.8000 1.0000 2.0000 0.0000 Constraint 374 459 0.8000 1.0000 2.0000 0.0000 Constraint 374 452 0.8000 1.0000 2.0000 0.0000 Constraint 374 447 0.8000 1.0000 2.0000 0.0000 Constraint 374 439 0.8000 1.0000 2.0000 0.0000 Constraint 374 431 0.8000 1.0000 2.0000 0.0000 Constraint 374 422 0.8000 1.0000 2.0000 0.0000 Constraint 374 414 0.8000 1.0000 2.0000 0.0000 Constraint 374 402 0.8000 1.0000 2.0000 0.0000 Constraint 374 393 0.8000 1.0000 2.0000 0.0000 Constraint 374 385 0.8000 1.0000 2.0000 0.0000 Constraint 362 729 0.8000 1.0000 2.0000 0.0000 Constraint 362 723 0.8000 1.0000 2.0000 0.0000 Constraint 362 707 0.8000 1.0000 2.0000 0.0000 Constraint 362 692 0.8000 1.0000 2.0000 0.0000 Constraint 362 681 0.8000 1.0000 2.0000 0.0000 Constraint 362 673 0.8000 1.0000 2.0000 0.0000 Constraint 362 642 0.8000 1.0000 2.0000 0.0000 Constraint 362 635 0.8000 1.0000 2.0000 0.0000 Constraint 362 628 0.8000 1.0000 2.0000 0.0000 Constraint 362 619 0.8000 1.0000 2.0000 0.0000 Constraint 362 608 0.8000 1.0000 2.0000 0.0000 Constraint 362 598 0.8000 1.0000 2.0000 0.0000 Constraint 362 587 0.8000 1.0000 2.0000 0.0000 Constraint 362 579 0.8000 1.0000 2.0000 0.0000 Constraint 362 572 0.8000 1.0000 2.0000 0.0000 Constraint 362 556 0.8000 1.0000 2.0000 0.0000 Constraint 362 551 0.8000 1.0000 2.0000 0.0000 Constraint 362 542 0.8000 1.0000 2.0000 0.0000 Constraint 362 533 0.8000 1.0000 2.0000 0.0000 Constraint 362 525 0.8000 1.0000 2.0000 0.0000 Constraint 362 518 0.8000 1.0000 2.0000 0.0000 Constraint 362 507 0.8000 1.0000 2.0000 0.0000 Constraint 362 494 0.8000 1.0000 2.0000 0.0000 Constraint 362 486 0.8000 1.0000 2.0000 0.0000 Constraint 362 478 0.8000 1.0000 2.0000 0.0000 Constraint 362 471 0.8000 1.0000 2.0000 0.0000 Constraint 362 459 0.8000 1.0000 2.0000 0.0000 Constraint 362 452 0.8000 1.0000 2.0000 0.0000 Constraint 362 447 0.8000 1.0000 2.0000 0.0000 Constraint 362 439 0.8000 1.0000 2.0000 0.0000 Constraint 362 431 0.8000 1.0000 2.0000 0.0000 Constraint 362 422 0.8000 1.0000 2.0000 0.0000 Constraint 362 414 0.8000 1.0000 2.0000 0.0000 Constraint 362 402 0.8000 1.0000 2.0000 0.0000 Constraint 362 393 0.8000 1.0000 2.0000 0.0000 Constraint 362 385 0.8000 1.0000 2.0000 0.0000 Constraint 362 374 0.8000 1.0000 2.0000 0.0000 Constraint 352 729 0.8000 1.0000 2.0000 0.0000 Constraint 352 707 0.8000 1.0000 2.0000 0.0000 Constraint 352 692 0.8000 1.0000 2.0000 0.0000 Constraint 352 681 0.8000 1.0000 2.0000 0.0000 Constraint 352 673 0.8000 1.0000 2.0000 0.0000 Constraint 352 665 0.8000 1.0000 2.0000 0.0000 Constraint 352 658 0.8000 1.0000 2.0000 0.0000 Constraint 352 650 0.8000 1.0000 2.0000 0.0000 Constraint 352 642 0.8000 1.0000 2.0000 0.0000 Constraint 352 635 0.8000 1.0000 2.0000 0.0000 Constraint 352 628 0.8000 1.0000 2.0000 0.0000 Constraint 352 619 0.8000 1.0000 2.0000 0.0000 Constraint 352 608 0.8000 1.0000 2.0000 0.0000 Constraint 352 598 0.8000 1.0000 2.0000 0.0000 Constraint 352 587 0.8000 1.0000 2.0000 0.0000 Constraint 352 579 0.8000 1.0000 2.0000 0.0000 Constraint 352 572 0.8000 1.0000 2.0000 0.0000 Constraint 352 563 0.8000 1.0000 2.0000 0.0000 Constraint 352 556 0.8000 1.0000 2.0000 0.0000 Constraint 352 551 0.8000 1.0000 2.0000 0.0000 Constraint 352 542 0.8000 1.0000 2.0000 0.0000 Constraint 352 533 0.8000 1.0000 2.0000 0.0000 Constraint 352 525 0.8000 1.0000 2.0000 0.0000 Constraint 352 518 0.8000 1.0000 2.0000 0.0000 Constraint 352 507 0.8000 1.0000 2.0000 0.0000 Constraint 352 494 0.8000 1.0000 2.0000 0.0000 Constraint 352 486 0.8000 1.0000 2.0000 0.0000 Constraint 352 478 0.8000 1.0000 2.0000 0.0000 Constraint 352 471 0.8000 1.0000 2.0000 0.0000 Constraint 352 459 0.8000 1.0000 2.0000 0.0000 Constraint 352 452 0.8000 1.0000 2.0000 0.0000 Constraint 352 447 0.8000 1.0000 2.0000 0.0000 Constraint 352 439 0.8000 1.0000 2.0000 0.0000 Constraint 352 431 0.8000 1.0000 2.0000 0.0000 Constraint 352 422 0.8000 1.0000 2.0000 0.0000 Constraint 352 414 0.8000 1.0000 2.0000 0.0000 Constraint 352 402 0.8000 1.0000 2.0000 0.0000 Constraint 352 393 0.8000 1.0000 2.0000 0.0000 Constraint 352 385 0.8000 1.0000 2.0000 0.0000 Constraint 352 374 0.8000 1.0000 2.0000 0.0000 Constraint 352 362 0.8000 1.0000 2.0000 0.0000 Constraint 343 729 0.8000 1.0000 2.0000 0.0000 Constraint 343 723 0.8000 1.0000 2.0000 0.0000 Constraint 343 716 0.8000 1.0000 2.0000 0.0000 Constraint 343 707 0.8000 1.0000 2.0000 0.0000 Constraint 343 692 0.8000 1.0000 2.0000 0.0000 Constraint 343 681 0.8000 1.0000 2.0000 0.0000 Constraint 343 673 0.8000 1.0000 2.0000 0.0000 Constraint 343 665 0.8000 1.0000 2.0000 0.0000 Constraint 343 658 0.8000 1.0000 2.0000 0.0000 Constraint 343 650 0.8000 1.0000 2.0000 0.0000 Constraint 343 642 0.8000 1.0000 2.0000 0.0000 Constraint 343 635 0.8000 1.0000 2.0000 0.0000 Constraint 343 628 0.8000 1.0000 2.0000 0.0000 Constraint 343 619 0.8000 1.0000 2.0000 0.0000 Constraint 343 608 0.8000 1.0000 2.0000 0.0000 Constraint 343 598 0.8000 1.0000 2.0000 0.0000 Constraint 343 587 0.8000 1.0000 2.0000 0.0000 Constraint 343 579 0.8000 1.0000 2.0000 0.0000 Constraint 343 572 0.8000 1.0000 2.0000 0.0000 Constraint 343 563 0.8000 1.0000 2.0000 0.0000 Constraint 343 556 0.8000 1.0000 2.0000 0.0000 Constraint 343 551 0.8000 1.0000 2.0000 0.0000 Constraint 343 542 0.8000 1.0000 2.0000 0.0000 Constraint 343 533 0.8000 1.0000 2.0000 0.0000 Constraint 343 525 0.8000 1.0000 2.0000 0.0000 Constraint 343 518 0.8000 1.0000 2.0000 0.0000 Constraint 343 507 0.8000 1.0000 2.0000 0.0000 Constraint 343 494 0.8000 1.0000 2.0000 0.0000 Constraint 343 486 0.8000 1.0000 2.0000 0.0000 Constraint 343 478 0.8000 1.0000 2.0000 0.0000 Constraint 343 471 0.8000 1.0000 2.0000 0.0000 Constraint 343 459 0.8000 1.0000 2.0000 0.0000 Constraint 343 452 0.8000 1.0000 2.0000 0.0000 Constraint 343 447 0.8000 1.0000 2.0000 0.0000 Constraint 343 439 0.8000 1.0000 2.0000 0.0000 Constraint 343 431 0.8000 1.0000 2.0000 0.0000 Constraint 343 422 0.8000 1.0000 2.0000 0.0000 Constraint 343 414 0.8000 1.0000 2.0000 0.0000 Constraint 343 402 0.8000 1.0000 2.0000 0.0000 Constraint 343 393 0.8000 1.0000 2.0000 0.0000 Constraint 343 385 0.8000 1.0000 2.0000 0.0000 Constraint 343 374 0.8000 1.0000 2.0000 0.0000 Constraint 343 362 0.8000 1.0000 2.0000 0.0000 Constraint 343 352 0.8000 1.0000 2.0000 0.0000 Constraint 336 729 0.8000 1.0000 2.0000 0.0000 Constraint 336 723 0.8000 1.0000 2.0000 0.0000 Constraint 336 716 0.8000 1.0000 2.0000 0.0000 Constraint 336 707 0.8000 1.0000 2.0000 0.0000 Constraint 336 692 0.8000 1.0000 2.0000 0.0000 Constraint 336 681 0.8000 1.0000 2.0000 0.0000 Constraint 336 673 0.8000 1.0000 2.0000 0.0000 Constraint 336 665 0.8000 1.0000 2.0000 0.0000 Constraint 336 642 0.8000 1.0000 2.0000 0.0000 Constraint 336 635 0.8000 1.0000 2.0000 0.0000 Constraint 336 628 0.8000 1.0000 2.0000 0.0000 Constraint 336 619 0.8000 1.0000 2.0000 0.0000 Constraint 336 608 0.8000 1.0000 2.0000 0.0000 Constraint 336 598 0.8000 1.0000 2.0000 0.0000 Constraint 336 587 0.8000 1.0000 2.0000 0.0000 Constraint 336 579 0.8000 1.0000 2.0000 0.0000 Constraint 336 572 0.8000 1.0000 2.0000 0.0000 Constraint 336 563 0.8000 1.0000 2.0000 0.0000 Constraint 336 556 0.8000 1.0000 2.0000 0.0000 Constraint 336 551 0.8000 1.0000 2.0000 0.0000 Constraint 336 542 0.8000 1.0000 2.0000 0.0000 Constraint 336 533 0.8000 1.0000 2.0000 0.0000 Constraint 336 525 0.8000 1.0000 2.0000 0.0000 Constraint 336 518 0.8000 1.0000 2.0000 0.0000 Constraint 336 507 0.8000 1.0000 2.0000 0.0000 Constraint 336 494 0.8000 1.0000 2.0000 0.0000 Constraint 336 486 0.8000 1.0000 2.0000 0.0000 Constraint 336 478 0.8000 1.0000 2.0000 0.0000 Constraint 336 471 0.8000 1.0000 2.0000 0.0000 Constraint 336 459 0.8000 1.0000 2.0000 0.0000 Constraint 336 452 0.8000 1.0000 2.0000 0.0000 Constraint 336 447 0.8000 1.0000 2.0000 0.0000 Constraint 336 439 0.8000 1.0000 2.0000 0.0000 Constraint 336 431 0.8000 1.0000 2.0000 0.0000 Constraint 336 422 0.8000 1.0000 2.0000 0.0000 Constraint 336 414 0.8000 1.0000 2.0000 0.0000 Constraint 336 402 0.8000 1.0000 2.0000 0.0000 Constraint 336 393 0.8000 1.0000 2.0000 0.0000 Constraint 336 385 0.8000 1.0000 2.0000 0.0000 Constraint 336 374 0.8000 1.0000 2.0000 0.0000 Constraint 336 362 0.8000 1.0000 2.0000 0.0000 Constraint 336 352 0.8000 1.0000 2.0000 0.0000 Constraint 336 343 0.8000 1.0000 2.0000 0.0000 Constraint 331 729 0.8000 1.0000 2.0000 0.0000 Constraint 331 707 0.8000 1.0000 2.0000 0.0000 Constraint 331 692 0.8000 1.0000 2.0000 0.0000 Constraint 331 681 0.8000 1.0000 2.0000 0.0000 Constraint 331 673 0.8000 1.0000 2.0000 0.0000 Constraint 331 665 0.8000 1.0000 2.0000 0.0000 Constraint 331 658 0.8000 1.0000 2.0000 0.0000 Constraint 331 650 0.8000 1.0000 2.0000 0.0000 Constraint 331 642 0.8000 1.0000 2.0000 0.0000 Constraint 331 608 0.8000 1.0000 2.0000 0.0000 Constraint 331 598 0.8000 1.0000 2.0000 0.0000 Constraint 331 587 0.8000 1.0000 2.0000 0.0000 Constraint 331 579 0.8000 1.0000 2.0000 0.0000 Constraint 331 572 0.8000 1.0000 2.0000 0.0000 Constraint 331 563 0.8000 1.0000 2.0000 0.0000 Constraint 331 556 0.8000 1.0000 2.0000 0.0000 Constraint 331 551 0.8000 1.0000 2.0000 0.0000 Constraint 331 542 0.8000 1.0000 2.0000 0.0000 Constraint 331 533 0.8000 1.0000 2.0000 0.0000 Constraint 331 525 0.8000 1.0000 2.0000 0.0000 Constraint 331 518 0.8000 1.0000 2.0000 0.0000 Constraint 331 507 0.8000 1.0000 2.0000 0.0000 Constraint 331 494 0.8000 1.0000 2.0000 0.0000 Constraint 331 486 0.8000 1.0000 2.0000 0.0000 Constraint 331 478 0.8000 1.0000 2.0000 0.0000 Constraint 331 471 0.8000 1.0000 2.0000 0.0000 Constraint 331 459 0.8000 1.0000 2.0000 0.0000 Constraint 331 452 0.8000 1.0000 2.0000 0.0000 Constraint 331 447 0.8000 1.0000 2.0000 0.0000 Constraint 331 439 0.8000 1.0000 2.0000 0.0000 Constraint 331 431 0.8000 1.0000 2.0000 0.0000 Constraint 331 422 0.8000 1.0000 2.0000 0.0000 Constraint 331 414 0.8000 1.0000 2.0000 0.0000 Constraint 331 402 0.8000 1.0000 2.0000 0.0000 Constraint 331 393 0.8000 1.0000 2.0000 0.0000 Constraint 331 385 0.8000 1.0000 2.0000 0.0000 Constraint 331 374 0.8000 1.0000 2.0000 0.0000 Constraint 331 362 0.8000 1.0000 2.0000 0.0000 Constraint 331 352 0.8000 1.0000 2.0000 0.0000 Constraint 331 343 0.8000 1.0000 2.0000 0.0000 Constraint 331 336 0.8000 1.0000 2.0000 0.0000 Constraint 325 729 0.8000 1.0000 2.0000 0.0000 Constraint 325 723 0.8000 1.0000 2.0000 0.0000 Constraint 325 716 0.8000 1.0000 2.0000 0.0000 Constraint 325 707 0.8000 1.0000 2.0000 0.0000 Constraint 325 692 0.8000 1.0000 2.0000 0.0000 Constraint 325 681 0.8000 1.0000 2.0000 0.0000 Constraint 325 673 0.8000 1.0000 2.0000 0.0000 Constraint 325 665 0.8000 1.0000 2.0000 0.0000 Constraint 325 658 0.8000 1.0000 2.0000 0.0000 Constraint 325 650 0.8000 1.0000 2.0000 0.0000 Constraint 325 642 0.8000 1.0000 2.0000 0.0000 Constraint 325 635 0.8000 1.0000 2.0000 0.0000 Constraint 325 628 0.8000 1.0000 2.0000 0.0000 Constraint 325 619 0.8000 1.0000 2.0000 0.0000 Constraint 325 608 0.8000 1.0000 2.0000 0.0000 Constraint 325 598 0.8000 1.0000 2.0000 0.0000 Constraint 325 587 0.8000 1.0000 2.0000 0.0000 Constraint 325 579 0.8000 1.0000 2.0000 0.0000 Constraint 325 572 0.8000 1.0000 2.0000 0.0000 Constraint 325 563 0.8000 1.0000 2.0000 0.0000 Constraint 325 556 0.8000 1.0000 2.0000 0.0000 Constraint 325 551 0.8000 1.0000 2.0000 0.0000 Constraint 325 542 0.8000 1.0000 2.0000 0.0000 Constraint 325 533 0.8000 1.0000 2.0000 0.0000 Constraint 325 525 0.8000 1.0000 2.0000 0.0000 Constraint 325 518 0.8000 1.0000 2.0000 0.0000 Constraint 325 507 0.8000 1.0000 2.0000 0.0000 Constraint 325 494 0.8000 1.0000 2.0000 0.0000 Constraint 325 486 0.8000 1.0000 2.0000 0.0000 Constraint 325 478 0.8000 1.0000 2.0000 0.0000 Constraint 325 471 0.8000 1.0000 2.0000 0.0000 Constraint 325 459 0.8000 1.0000 2.0000 0.0000 Constraint 325 452 0.8000 1.0000 2.0000 0.0000 Constraint 325 447 0.8000 1.0000 2.0000 0.0000 Constraint 325 439 0.8000 1.0000 2.0000 0.0000 Constraint 325 431 0.8000 1.0000 2.0000 0.0000 Constraint 325 422 0.8000 1.0000 2.0000 0.0000 Constraint 325 414 0.8000 1.0000 2.0000 0.0000 Constraint 325 402 0.8000 1.0000 2.0000 0.0000 Constraint 325 393 0.8000 1.0000 2.0000 0.0000 Constraint 325 385 0.8000 1.0000 2.0000 0.0000 Constraint 325 374 0.8000 1.0000 2.0000 0.0000 Constraint 325 362 0.8000 1.0000 2.0000 0.0000 Constraint 325 352 0.8000 1.0000 2.0000 0.0000 Constraint 325 343 0.8000 1.0000 2.0000 0.0000 Constraint 325 336 0.8000 1.0000 2.0000 0.0000 Constraint 325 331 0.8000 1.0000 2.0000 0.0000 Constraint 319 729 0.8000 1.0000 2.0000 0.0000 Constraint 319 723 0.8000 1.0000 2.0000 0.0000 Constraint 319 716 0.8000 1.0000 2.0000 0.0000 Constraint 319 707 0.8000 1.0000 2.0000 0.0000 Constraint 319 692 0.8000 1.0000 2.0000 0.0000 Constraint 319 681 0.8000 1.0000 2.0000 0.0000 Constraint 319 673 0.8000 1.0000 2.0000 0.0000 Constraint 319 665 0.8000 1.0000 2.0000 0.0000 Constraint 319 658 0.8000 1.0000 2.0000 0.0000 Constraint 319 650 0.8000 1.0000 2.0000 0.0000 Constraint 319 642 0.8000 1.0000 2.0000 0.0000 Constraint 319 635 0.8000 1.0000 2.0000 0.0000 Constraint 319 628 0.8000 1.0000 2.0000 0.0000 Constraint 319 619 0.8000 1.0000 2.0000 0.0000 Constraint 319 608 0.8000 1.0000 2.0000 0.0000 Constraint 319 598 0.8000 1.0000 2.0000 0.0000 Constraint 319 587 0.8000 1.0000 2.0000 0.0000 Constraint 319 579 0.8000 1.0000 2.0000 0.0000 Constraint 319 572 0.8000 1.0000 2.0000 0.0000 Constraint 319 563 0.8000 1.0000 2.0000 0.0000 Constraint 319 556 0.8000 1.0000 2.0000 0.0000 Constraint 319 551 0.8000 1.0000 2.0000 0.0000 Constraint 319 542 0.8000 1.0000 2.0000 0.0000 Constraint 319 533 0.8000 1.0000 2.0000 0.0000 Constraint 319 525 0.8000 1.0000 2.0000 0.0000 Constraint 319 518 0.8000 1.0000 2.0000 0.0000 Constraint 319 507 0.8000 1.0000 2.0000 0.0000 Constraint 319 494 0.8000 1.0000 2.0000 0.0000 Constraint 319 486 0.8000 1.0000 2.0000 0.0000 Constraint 319 478 0.8000 1.0000 2.0000 0.0000 Constraint 319 471 0.8000 1.0000 2.0000 0.0000 Constraint 319 459 0.8000 1.0000 2.0000 0.0000 Constraint 319 452 0.8000 1.0000 2.0000 0.0000 Constraint 319 447 0.8000 1.0000 2.0000 0.0000 Constraint 319 439 0.8000 1.0000 2.0000 0.0000 Constraint 319 431 0.8000 1.0000 2.0000 0.0000 Constraint 319 422 0.8000 1.0000 2.0000 0.0000 Constraint 319 414 0.8000 1.0000 2.0000 0.0000 Constraint 319 402 0.8000 1.0000 2.0000 0.0000 Constraint 319 393 0.8000 1.0000 2.0000 0.0000 Constraint 319 385 0.8000 1.0000 2.0000 0.0000 Constraint 319 374 0.8000 1.0000 2.0000 0.0000 Constraint 319 362 0.8000 1.0000 2.0000 0.0000 Constraint 319 352 0.8000 1.0000 2.0000 0.0000 Constraint 319 343 0.8000 1.0000 2.0000 0.0000 Constraint 319 336 0.8000 1.0000 2.0000 0.0000 Constraint 319 331 0.8000 1.0000 2.0000 0.0000 Constraint 319 325 0.8000 1.0000 2.0000 0.0000 Constraint 310 729 0.8000 1.0000 2.0000 0.0000 Constraint 310 723 0.8000 1.0000 2.0000 0.0000 Constraint 310 716 0.8000 1.0000 2.0000 0.0000 Constraint 310 707 0.8000 1.0000 2.0000 0.0000 Constraint 310 692 0.8000 1.0000 2.0000 0.0000 Constraint 310 681 0.8000 1.0000 2.0000 0.0000 Constraint 310 673 0.8000 1.0000 2.0000 0.0000 Constraint 310 665 0.8000 1.0000 2.0000 0.0000 Constraint 310 658 0.8000 1.0000 2.0000 0.0000 Constraint 310 650 0.8000 1.0000 2.0000 0.0000 Constraint 310 642 0.8000 1.0000 2.0000 0.0000 Constraint 310 635 0.8000 1.0000 2.0000 0.0000 Constraint 310 628 0.8000 1.0000 2.0000 0.0000 Constraint 310 619 0.8000 1.0000 2.0000 0.0000 Constraint 310 608 0.8000 1.0000 2.0000 0.0000 Constraint 310 598 0.8000 1.0000 2.0000 0.0000 Constraint 310 587 0.8000 1.0000 2.0000 0.0000 Constraint 310 579 0.8000 1.0000 2.0000 0.0000 Constraint 310 572 0.8000 1.0000 2.0000 0.0000 Constraint 310 563 0.8000 1.0000 2.0000 0.0000 Constraint 310 556 0.8000 1.0000 2.0000 0.0000 Constraint 310 551 0.8000 1.0000 2.0000 0.0000 Constraint 310 542 0.8000 1.0000 2.0000 0.0000 Constraint 310 533 0.8000 1.0000 2.0000 0.0000 Constraint 310 525 0.8000 1.0000 2.0000 0.0000 Constraint 310 518 0.8000 1.0000 2.0000 0.0000 Constraint 310 507 0.8000 1.0000 2.0000 0.0000 Constraint 310 494 0.8000 1.0000 2.0000 0.0000 Constraint 310 486 0.8000 1.0000 2.0000 0.0000 Constraint 310 478 0.8000 1.0000 2.0000 0.0000 Constraint 310 471 0.8000 1.0000 2.0000 0.0000 Constraint 310 459 0.8000 1.0000 2.0000 0.0000 Constraint 310 452 0.8000 1.0000 2.0000 0.0000 Constraint 310 447 0.8000 1.0000 2.0000 0.0000 Constraint 310 439 0.8000 1.0000 2.0000 0.0000 Constraint 310 431 0.8000 1.0000 2.0000 0.0000 Constraint 310 422 0.8000 1.0000 2.0000 0.0000 Constraint 310 414 0.8000 1.0000 2.0000 0.0000 Constraint 310 402 0.8000 1.0000 2.0000 0.0000 Constraint 310 393 0.8000 1.0000 2.0000 0.0000 Constraint 310 385 0.8000 1.0000 2.0000 0.0000 Constraint 310 374 0.8000 1.0000 2.0000 0.0000 Constraint 310 362 0.8000 1.0000 2.0000 0.0000 Constraint 310 352 0.8000 1.0000 2.0000 0.0000 Constraint 310 343 0.8000 1.0000 2.0000 0.0000 Constraint 310 336 0.8000 1.0000 2.0000 0.0000 Constraint 310 331 0.8000 1.0000 2.0000 0.0000 Constraint 310 325 0.8000 1.0000 2.0000 0.0000 Constraint 310 319 0.8000 1.0000 2.0000 0.0000 Constraint 303 729 0.8000 1.0000 2.0000 0.0000 Constraint 303 723 0.8000 1.0000 2.0000 0.0000 Constraint 303 716 0.8000 1.0000 2.0000 0.0000 Constraint 303 707 0.8000 1.0000 2.0000 0.0000 Constraint 303 692 0.8000 1.0000 2.0000 0.0000 Constraint 303 681 0.8000 1.0000 2.0000 0.0000 Constraint 303 673 0.8000 1.0000 2.0000 0.0000 Constraint 303 665 0.8000 1.0000 2.0000 0.0000 Constraint 303 658 0.8000 1.0000 2.0000 0.0000 Constraint 303 650 0.8000 1.0000 2.0000 0.0000 Constraint 303 642 0.8000 1.0000 2.0000 0.0000 Constraint 303 635 0.8000 1.0000 2.0000 0.0000 Constraint 303 628 0.8000 1.0000 2.0000 0.0000 Constraint 303 619 0.8000 1.0000 2.0000 0.0000 Constraint 303 608 0.8000 1.0000 2.0000 0.0000 Constraint 303 598 0.8000 1.0000 2.0000 0.0000 Constraint 303 587 0.8000 1.0000 2.0000 0.0000 Constraint 303 579 0.8000 1.0000 2.0000 0.0000 Constraint 303 572 0.8000 1.0000 2.0000 0.0000 Constraint 303 563 0.8000 1.0000 2.0000 0.0000 Constraint 303 556 0.8000 1.0000 2.0000 0.0000 Constraint 303 551 0.8000 1.0000 2.0000 0.0000 Constraint 303 542 0.8000 1.0000 2.0000 0.0000 Constraint 303 533 0.8000 1.0000 2.0000 0.0000 Constraint 303 525 0.8000 1.0000 2.0000 0.0000 Constraint 303 518 0.8000 1.0000 2.0000 0.0000 Constraint 303 507 0.8000 1.0000 2.0000 0.0000 Constraint 303 494 0.8000 1.0000 2.0000 0.0000 Constraint 303 486 0.8000 1.0000 2.0000 0.0000 Constraint 303 478 0.8000 1.0000 2.0000 0.0000 Constraint 303 471 0.8000 1.0000 2.0000 0.0000 Constraint 303 459 0.8000 1.0000 2.0000 0.0000 Constraint 303 452 0.8000 1.0000 2.0000 0.0000 Constraint 303 447 0.8000 1.0000 2.0000 0.0000 Constraint 303 439 0.8000 1.0000 2.0000 0.0000 Constraint 303 431 0.8000 1.0000 2.0000 0.0000 Constraint 303 422 0.8000 1.0000 2.0000 0.0000 Constraint 303 414 0.8000 1.0000 2.0000 0.0000 Constraint 303 393 0.8000 1.0000 2.0000 0.0000 Constraint 303 374 0.8000 1.0000 2.0000 0.0000 Constraint 303 362 0.8000 1.0000 2.0000 0.0000 Constraint 303 352 0.8000 1.0000 2.0000 0.0000 Constraint 303 343 0.8000 1.0000 2.0000 0.0000 Constraint 303 336 0.8000 1.0000 2.0000 0.0000 Constraint 303 331 0.8000 1.0000 2.0000 0.0000 Constraint 303 325 0.8000 1.0000 2.0000 0.0000 Constraint 303 319 0.8000 1.0000 2.0000 0.0000 Constraint 303 310 0.8000 1.0000 2.0000 0.0000 Constraint 295 729 0.8000 1.0000 2.0000 0.0000 Constraint 295 723 0.8000 1.0000 2.0000 0.0000 Constraint 295 716 0.8000 1.0000 2.0000 0.0000 Constraint 295 707 0.8000 1.0000 2.0000 0.0000 Constraint 295 692 0.8000 1.0000 2.0000 0.0000 Constraint 295 681 0.8000 1.0000 2.0000 0.0000 Constraint 295 673 0.8000 1.0000 2.0000 0.0000 Constraint 295 665 0.8000 1.0000 2.0000 0.0000 Constraint 295 658 0.8000 1.0000 2.0000 0.0000 Constraint 295 650 0.8000 1.0000 2.0000 0.0000 Constraint 295 642 0.8000 1.0000 2.0000 0.0000 Constraint 295 635 0.8000 1.0000 2.0000 0.0000 Constraint 295 628 0.8000 1.0000 2.0000 0.0000 Constraint 295 619 0.8000 1.0000 2.0000 0.0000 Constraint 295 608 0.8000 1.0000 2.0000 0.0000 Constraint 295 598 0.8000 1.0000 2.0000 0.0000 Constraint 295 587 0.8000 1.0000 2.0000 0.0000 Constraint 295 579 0.8000 1.0000 2.0000 0.0000 Constraint 295 572 0.8000 1.0000 2.0000 0.0000 Constraint 295 563 0.8000 1.0000 2.0000 0.0000 Constraint 295 556 0.8000 1.0000 2.0000 0.0000 Constraint 295 551 0.8000 1.0000 2.0000 0.0000 Constraint 295 542 0.8000 1.0000 2.0000 0.0000 Constraint 295 533 0.8000 1.0000 2.0000 0.0000 Constraint 295 525 0.8000 1.0000 2.0000 0.0000 Constraint 295 518 0.8000 1.0000 2.0000 0.0000 Constraint 295 507 0.8000 1.0000 2.0000 0.0000 Constraint 295 494 0.8000 1.0000 2.0000 0.0000 Constraint 295 486 0.8000 1.0000 2.0000 0.0000 Constraint 295 478 0.8000 1.0000 2.0000 0.0000 Constraint 295 471 0.8000 1.0000 2.0000 0.0000 Constraint 295 459 0.8000 1.0000 2.0000 0.0000 Constraint 295 452 0.8000 1.0000 2.0000 0.0000 Constraint 295 447 0.8000 1.0000 2.0000 0.0000 Constraint 295 439 0.8000 1.0000 2.0000 0.0000 Constraint 295 431 0.8000 1.0000 2.0000 0.0000 Constraint 295 422 0.8000 1.0000 2.0000 0.0000 Constraint 295 352 0.8000 1.0000 2.0000 0.0000 Constraint 295 343 0.8000 1.0000 2.0000 0.0000 Constraint 295 336 0.8000 1.0000 2.0000 0.0000 Constraint 295 331 0.8000 1.0000 2.0000 0.0000 Constraint 295 325 0.8000 1.0000 2.0000 0.0000 Constraint 295 319 0.8000 1.0000 2.0000 0.0000 Constraint 295 310 0.8000 1.0000 2.0000 0.0000 Constraint 295 303 0.8000 1.0000 2.0000 0.0000 Constraint 289 729 0.8000 1.0000 2.0000 0.0000 Constraint 289 723 0.8000 1.0000 2.0000 0.0000 Constraint 289 716 0.8000 1.0000 2.0000 0.0000 Constraint 289 707 0.8000 1.0000 2.0000 0.0000 Constraint 289 692 0.8000 1.0000 2.0000 0.0000 Constraint 289 681 0.8000 1.0000 2.0000 0.0000 Constraint 289 673 0.8000 1.0000 2.0000 0.0000 Constraint 289 665 0.8000 1.0000 2.0000 0.0000 Constraint 289 658 0.8000 1.0000 2.0000 0.0000 Constraint 289 650 0.8000 1.0000 2.0000 0.0000 Constraint 289 642 0.8000 1.0000 2.0000 0.0000 Constraint 289 635 0.8000 1.0000 2.0000 0.0000 Constraint 289 628 0.8000 1.0000 2.0000 0.0000 Constraint 289 619 0.8000 1.0000 2.0000 0.0000 Constraint 289 608 0.8000 1.0000 2.0000 0.0000 Constraint 289 598 0.8000 1.0000 2.0000 0.0000 Constraint 289 587 0.8000 1.0000 2.0000 0.0000 Constraint 289 579 0.8000 1.0000 2.0000 0.0000 Constraint 289 572 0.8000 1.0000 2.0000 0.0000 Constraint 289 563 0.8000 1.0000 2.0000 0.0000 Constraint 289 556 0.8000 1.0000 2.0000 0.0000 Constraint 289 551 0.8000 1.0000 2.0000 0.0000 Constraint 289 542 0.8000 1.0000 2.0000 0.0000 Constraint 289 533 0.8000 1.0000 2.0000 0.0000 Constraint 289 525 0.8000 1.0000 2.0000 0.0000 Constraint 289 518 0.8000 1.0000 2.0000 0.0000 Constraint 289 507 0.8000 1.0000 2.0000 0.0000 Constraint 289 494 0.8000 1.0000 2.0000 0.0000 Constraint 289 486 0.8000 1.0000 2.0000 0.0000 Constraint 289 478 0.8000 1.0000 2.0000 0.0000 Constraint 289 471 0.8000 1.0000 2.0000 0.0000 Constraint 289 459 0.8000 1.0000 2.0000 0.0000 Constraint 289 452 0.8000 1.0000 2.0000 0.0000 Constraint 289 447 0.8000 1.0000 2.0000 0.0000 Constraint 289 439 0.8000 1.0000 2.0000 0.0000 Constraint 289 431 0.8000 1.0000 2.0000 0.0000 Constraint 289 422 0.8000 1.0000 2.0000 0.0000 Constraint 289 414 0.8000 1.0000 2.0000 0.0000 Constraint 289 385 0.8000 1.0000 2.0000 0.0000 Constraint 289 374 0.8000 1.0000 2.0000 0.0000 Constraint 289 362 0.8000 1.0000 2.0000 0.0000 Constraint 289 352 0.8000 1.0000 2.0000 0.0000 Constraint 289 343 0.8000 1.0000 2.0000 0.0000 Constraint 289 336 0.8000 1.0000 2.0000 0.0000 Constraint 289 331 0.8000 1.0000 2.0000 0.0000 Constraint 289 325 0.8000 1.0000 2.0000 0.0000 Constraint 289 319 0.8000 1.0000 2.0000 0.0000 Constraint 289 310 0.8000 1.0000 2.0000 0.0000 Constraint 289 303 0.8000 1.0000 2.0000 0.0000 Constraint 289 295 0.8000 1.0000 2.0000 0.0000 Constraint 280 729 0.8000 1.0000 2.0000 0.0000 Constraint 280 716 0.8000 1.0000 2.0000 0.0000 Constraint 280 707 0.8000 1.0000 2.0000 0.0000 Constraint 280 692 0.8000 1.0000 2.0000 0.0000 Constraint 280 681 0.8000 1.0000 2.0000 0.0000 Constraint 280 673 0.8000 1.0000 2.0000 0.0000 Constraint 280 665 0.8000 1.0000 2.0000 0.0000 Constraint 280 658 0.8000 1.0000 2.0000 0.0000 Constraint 280 650 0.8000 1.0000 2.0000 0.0000 Constraint 280 642 0.8000 1.0000 2.0000 0.0000 Constraint 280 635 0.8000 1.0000 2.0000 0.0000 Constraint 280 628 0.8000 1.0000 2.0000 0.0000 Constraint 280 619 0.8000 1.0000 2.0000 0.0000 Constraint 280 608 0.8000 1.0000 2.0000 0.0000 Constraint 280 598 0.8000 1.0000 2.0000 0.0000 Constraint 280 587 0.8000 1.0000 2.0000 0.0000 Constraint 280 579 0.8000 1.0000 2.0000 0.0000 Constraint 280 572 0.8000 1.0000 2.0000 0.0000 Constraint 280 563 0.8000 1.0000 2.0000 0.0000 Constraint 280 556 0.8000 1.0000 2.0000 0.0000 Constraint 280 551 0.8000 1.0000 2.0000 0.0000 Constraint 280 542 0.8000 1.0000 2.0000 0.0000 Constraint 280 533 0.8000 1.0000 2.0000 0.0000 Constraint 280 525 0.8000 1.0000 2.0000 0.0000 Constraint 280 518 0.8000 1.0000 2.0000 0.0000 Constraint 280 507 0.8000 1.0000 2.0000 0.0000 Constraint 280 494 0.8000 1.0000 2.0000 0.0000 Constraint 280 486 0.8000 1.0000 2.0000 0.0000 Constraint 280 478 0.8000 1.0000 2.0000 0.0000 Constraint 280 471 0.8000 1.0000 2.0000 0.0000 Constraint 280 459 0.8000 1.0000 2.0000 0.0000 Constraint 280 452 0.8000 1.0000 2.0000 0.0000 Constraint 280 447 0.8000 1.0000 2.0000 0.0000 Constraint 280 439 0.8000 1.0000 2.0000 0.0000 Constraint 280 431 0.8000 1.0000 2.0000 0.0000 Constraint 280 422 0.8000 1.0000 2.0000 0.0000 Constraint 280 414 0.8000 1.0000 2.0000 0.0000 Constraint 280 393 0.8000 1.0000 2.0000 0.0000 Constraint 280 385 0.8000 1.0000 2.0000 0.0000 Constraint 280 374 0.8000 1.0000 2.0000 0.0000 Constraint 280 362 0.8000 1.0000 2.0000 0.0000 Constraint 280 352 0.8000 1.0000 2.0000 0.0000 Constraint 280 343 0.8000 1.0000 2.0000 0.0000 Constraint 280 336 0.8000 1.0000 2.0000 0.0000 Constraint 280 331 0.8000 1.0000 2.0000 0.0000 Constraint 280 325 0.8000 1.0000 2.0000 0.0000 Constraint 280 319 0.8000 1.0000 2.0000 0.0000 Constraint 280 310 0.8000 1.0000 2.0000 0.0000 Constraint 280 303 0.8000 1.0000 2.0000 0.0000 Constraint 280 295 0.8000 1.0000 2.0000 0.0000 Constraint 280 289 0.8000 1.0000 2.0000 0.0000 Constraint 273 729 0.8000 1.0000 2.0000 0.0000 Constraint 273 716 0.8000 1.0000 2.0000 0.0000 Constraint 273 707 0.8000 1.0000 2.0000 0.0000 Constraint 273 658 0.8000 1.0000 2.0000 0.0000 Constraint 273 642 0.8000 1.0000 2.0000 0.0000 Constraint 273 635 0.8000 1.0000 2.0000 0.0000 Constraint 273 628 0.8000 1.0000 2.0000 0.0000 Constraint 273 619 0.8000 1.0000 2.0000 0.0000 Constraint 273 608 0.8000 1.0000 2.0000 0.0000 Constraint 273 598 0.8000 1.0000 2.0000 0.0000 Constraint 273 587 0.8000 1.0000 2.0000 0.0000 Constraint 273 572 0.8000 1.0000 2.0000 0.0000 Constraint 273 563 0.8000 1.0000 2.0000 0.0000 Constraint 273 556 0.8000 1.0000 2.0000 0.0000 Constraint 273 551 0.8000 1.0000 2.0000 0.0000 Constraint 273 542 0.8000 1.0000 2.0000 0.0000 Constraint 273 533 0.8000 1.0000 2.0000 0.0000 Constraint 273 525 0.8000 1.0000 2.0000 0.0000 Constraint 273 518 0.8000 1.0000 2.0000 0.0000 Constraint 273 507 0.8000 1.0000 2.0000 0.0000 Constraint 273 494 0.8000 1.0000 2.0000 0.0000 Constraint 273 486 0.8000 1.0000 2.0000 0.0000 Constraint 273 478 0.8000 1.0000 2.0000 0.0000 Constraint 273 471 0.8000 1.0000 2.0000 0.0000 Constraint 273 459 0.8000 1.0000 2.0000 0.0000 Constraint 273 452 0.8000 1.0000 2.0000 0.0000 Constraint 273 447 0.8000 1.0000 2.0000 0.0000 Constraint 273 439 0.8000 1.0000 2.0000 0.0000 Constraint 273 374 0.8000 1.0000 2.0000 0.0000 Constraint 273 362 0.8000 1.0000 2.0000 0.0000 Constraint 273 352 0.8000 1.0000 2.0000 0.0000 Constraint 273 343 0.8000 1.0000 2.0000 0.0000 Constraint 273 331 0.8000 1.0000 2.0000 0.0000 Constraint 273 325 0.8000 1.0000 2.0000 0.0000 Constraint 273 319 0.8000 1.0000 2.0000 0.0000 Constraint 273 310 0.8000 1.0000 2.0000 0.0000 Constraint 273 303 0.8000 1.0000 2.0000 0.0000 Constraint 273 295 0.8000 1.0000 2.0000 0.0000 Constraint 273 289 0.8000 1.0000 2.0000 0.0000 Constraint 273 280 0.8000 1.0000 2.0000 0.0000 Constraint 262 729 0.8000 1.0000 2.0000 0.0000 Constraint 262 707 0.8000 1.0000 2.0000 0.0000 Constraint 262 681 0.8000 1.0000 2.0000 0.0000 Constraint 262 658 0.8000 1.0000 2.0000 0.0000 Constraint 262 650 0.8000 1.0000 2.0000 0.0000 Constraint 262 642 0.8000 1.0000 2.0000 0.0000 Constraint 262 635 0.8000 1.0000 2.0000 0.0000 Constraint 262 628 0.8000 1.0000 2.0000 0.0000 Constraint 262 619 0.8000 1.0000 2.0000 0.0000 Constraint 262 608 0.8000 1.0000 2.0000 0.0000 Constraint 262 598 0.8000 1.0000 2.0000 0.0000 Constraint 262 587 0.8000 1.0000 2.0000 0.0000 Constraint 262 579 0.8000 1.0000 2.0000 0.0000 Constraint 262 572 0.8000 1.0000 2.0000 0.0000 Constraint 262 563 0.8000 1.0000 2.0000 0.0000 Constraint 262 556 0.8000 1.0000 2.0000 0.0000 Constraint 262 551 0.8000 1.0000 2.0000 0.0000 Constraint 262 542 0.8000 1.0000 2.0000 0.0000 Constraint 262 533 0.8000 1.0000 2.0000 0.0000 Constraint 262 518 0.8000 1.0000 2.0000 0.0000 Constraint 262 494 0.8000 1.0000 2.0000 0.0000 Constraint 262 486 0.8000 1.0000 2.0000 0.0000 Constraint 262 478 0.8000 1.0000 2.0000 0.0000 Constraint 262 471 0.8000 1.0000 2.0000 0.0000 Constraint 262 459 0.8000 1.0000 2.0000 0.0000 Constraint 262 452 0.8000 1.0000 2.0000 0.0000 Constraint 262 447 0.8000 1.0000 2.0000 0.0000 Constraint 262 439 0.8000 1.0000 2.0000 0.0000 Constraint 262 393 0.8000 1.0000 2.0000 0.0000 Constraint 262 385 0.8000 1.0000 2.0000 0.0000 Constraint 262 374 0.8000 1.0000 2.0000 0.0000 Constraint 262 362 0.8000 1.0000 2.0000 0.0000 Constraint 262 352 0.8000 1.0000 2.0000 0.0000 Constraint 262 343 0.8000 1.0000 2.0000 0.0000 Constraint 262 336 0.8000 1.0000 2.0000 0.0000 Constraint 262 331 0.8000 1.0000 2.0000 0.0000 Constraint 262 325 0.8000 1.0000 2.0000 0.0000 Constraint 262 319 0.8000 1.0000 2.0000 0.0000 Constraint 262 310 0.8000 1.0000 2.0000 0.0000 Constraint 262 303 0.8000 1.0000 2.0000 0.0000 Constraint 262 295 0.8000 1.0000 2.0000 0.0000 Constraint 262 289 0.8000 1.0000 2.0000 0.0000 Constraint 262 280 0.8000 1.0000 2.0000 0.0000 Constraint 262 273 0.8000 1.0000 2.0000 0.0000 Constraint 254 729 0.8000 1.0000 2.0000 0.0000 Constraint 254 723 0.8000 1.0000 2.0000 0.0000 Constraint 254 716 0.8000 1.0000 2.0000 0.0000 Constraint 254 707 0.8000 1.0000 2.0000 0.0000 Constraint 254 692 0.8000 1.0000 2.0000 0.0000 Constraint 254 681 0.8000 1.0000 2.0000 0.0000 Constraint 254 673 0.8000 1.0000 2.0000 0.0000 Constraint 254 665 0.8000 1.0000 2.0000 0.0000 Constraint 254 658 0.8000 1.0000 2.0000 0.0000 Constraint 254 650 0.8000 1.0000 2.0000 0.0000 Constraint 254 642 0.8000 1.0000 2.0000 0.0000 Constraint 254 635 0.8000 1.0000 2.0000 0.0000 Constraint 254 628 0.8000 1.0000 2.0000 0.0000 Constraint 254 619 0.8000 1.0000 2.0000 0.0000 Constraint 254 608 0.8000 1.0000 2.0000 0.0000 Constraint 254 598 0.8000 1.0000 2.0000 0.0000 Constraint 254 587 0.8000 1.0000 2.0000 0.0000 Constraint 254 563 0.8000 1.0000 2.0000 0.0000 Constraint 254 478 0.8000 1.0000 2.0000 0.0000 Constraint 254 471 0.8000 1.0000 2.0000 0.0000 Constraint 254 459 0.8000 1.0000 2.0000 0.0000 Constraint 254 447 0.8000 1.0000 2.0000 0.0000 Constraint 254 414 0.8000 1.0000 2.0000 0.0000 Constraint 254 402 0.8000 1.0000 2.0000 0.0000 Constraint 254 393 0.8000 1.0000 2.0000 0.0000 Constraint 254 385 0.8000 1.0000 2.0000 0.0000 Constraint 254 374 0.8000 1.0000 2.0000 0.0000 Constraint 254 362 0.8000 1.0000 2.0000 0.0000 Constraint 254 352 0.8000 1.0000 2.0000 0.0000 Constraint 254 343 0.8000 1.0000 2.0000 0.0000 Constraint 254 336 0.8000 1.0000 2.0000 0.0000 Constraint 254 331 0.8000 1.0000 2.0000 0.0000 Constraint 254 325 0.8000 1.0000 2.0000 0.0000 Constraint 254 319 0.8000 1.0000 2.0000 0.0000 Constraint 254 310 0.8000 1.0000 2.0000 0.0000 Constraint 254 303 0.8000 1.0000 2.0000 0.0000 Constraint 254 295 0.8000 1.0000 2.0000 0.0000 Constraint 254 289 0.8000 1.0000 2.0000 0.0000 Constraint 254 280 0.8000 1.0000 2.0000 0.0000 Constraint 254 273 0.8000 1.0000 2.0000 0.0000 Constraint 254 262 0.8000 1.0000 2.0000 0.0000 Constraint 244 729 0.8000 1.0000 2.0000 0.0000 Constraint 244 723 0.8000 1.0000 2.0000 0.0000 Constraint 244 707 0.8000 1.0000 2.0000 0.0000 Constraint 244 665 0.8000 1.0000 2.0000 0.0000 Constraint 244 658 0.8000 1.0000 2.0000 0.0000 Constraint 244 650 0.8000 1.0000 2.0000 0.0000 Constraint 244 642 0.8000 1.0000 2.0000 0.0000 Constraint 244 635 0.8000 1.0000 2.0000 0.0000 Constraint 244 628 0.8000 1.0000 2.0000 0.0000 Constraint 244 619 0.8000 1.0000 2.0000 0.0000 Constraint 244 608 0.8000 1.0000 2.0000 0.0000 Constraint 244 598 0.8000 1.0000 2.0000 0.0000 Constraint 244 587 0.8000 1.0000 2.0000 0.0000 Constraint 244 579 0.8000 1.0000 2.0000 0.0000 Constraint 244 572 0.8000 1.0000 2.0000 0.0000 Constraint 244 563 0.8000 1.0000 2.0000 0.0000 Constraint 244 556 0.8000 1.0000 2.0000 0.0000 Constraint 244 542 0.8000 1.0000 2.0000 0.0000 Constraint 244 533 0.8000 1.0000 2.0000 0.0000 Constraint 244 471 0.8000 1.0000 2.0000 0.0000 Constraint 244 459 0.8000 1.0000 2.0000 0.0000 Constraint 244 452 0.8000 1.0000 2.0000 0.0000 Constraint 244 447 0.8000 1.0000 2.0000 0.0000 Constraint 244 414 0.8000 1.0000 2.0000 0.0000 Constraint 244 402 0.8000 1.0000 2.0000 0.0000 Constraint 244 393 0.8000 1.0000 2.0000 0.0000 Constraint 244 385 0.8000 1.0000 2.0000 0.0000 Constraint 244 374 0.8000 1.0000 2.0000 0.0000 Constraint 244 362 0.8000 1.0000 2.0000 0.0000 Constraint 244 352 0.8000 1.0000 2.0000 0.0000 Constraint 244 343 0.8000 1.0000 2.0000 0.0000 Constraint 244 336 0.8000 1.0000 2.0000 0.0000 Constraint 244 331 0.8000 1.0000 2.0000 0.0000 Constraint 244 325 0.8000 1.0000 2.0000 0.0000 Constraint 244 319 0.8000 1.0000 2.0000 0.0000 Constraint 244 310 0.8000 1.0000 2.0000 0.0000 Constraint 244 303 0.8000 1.0000 2.0000 0.0000 Constraint 244 295 0.8000 1.0000 2.0000 0.0000 Constraint 244 289 0.8000 1.0000 2.0000 0.0000 Constraint 244 280 0.8000 1.0000 2.0000 0.0000 Constraint 244 273 0.8000 1.0000 2.0000 0.0000 Constraint 244 262 0.8000 1.0000 2.0000 0.0000 Constraint 244 254 0.8000 1.0000 2.0000 0.0000 Constraint 237 729 0.8000 1.0000 2.0000 0.0000 Constraint 237 723 0.8000 1.0000 2.0000 0.0000 Constraint 237 716 0.8000 1.0000 2.0000 0.0000 Constraint 237 707 0.8000 1.0000 2.0000 0.0000 Constraint 237 681 0.8000 1.0000 2.0000 0.0000 Constraint 237 665 0.8000 1.0000 2.0000 0.0000 Constraint 237 658 0.8000 1.0000 2.0000 0.0000 Constraint 237 650 0.8000 1.0000 2.0000 0.0000 Constraint 237 642 0.8000 1.0000 2.0000 0.0000 Constraint 237 635 0.8000 1.0000 2.0000 0.0000 Constraint 237 628 0.8000 1.0000 2.0000 0.0000 Constraint 237 619 0.8000 1.0000 2.0000 0.0000 Constraint 237 608 0.8000 1.0000 2.0000 0.0000 Constraint 237 598 0.8000 1.0000 2.0000 0.0000 Constraint 237 587 0.8000 1.0000 2.0000 0.0000 Constraint 237 579 0.8000 1.0000 2.0000 0.0000 Constraint 237 572 0.8000 1.0000 2.0000 0.0000 Constraint 237 563 0.8000 1.0000 2.0000 0.0000 Constraint 237 556 0.8000 1.0000 2.0000 0.0000 Constraint 237 542 0.8000 1.0000 2.0000 0.0000 Constraint 237 533 0.8000 1.0000 2.0000 0.0000 Constraint 237 478 0.8000 1.0000 2.0000 0.0000 Constraint 237 471 0.8000 1.0000 2.0000 0.0000 Constraint 237 459 0.8000 1.0000 2.0000 0.0000 Constraint 237 452 0.8000 1.0000 2.0000 0.0000 Constraint 237 447 0.8000 1.0000 2.0000 0.0000 Constraint 237 431 0.8000 1.0000 2.0000 0.0000 Constraint 237 414 0.8000 1.0000 2.0000 0.0000 Constraint 237 402 0.8000 1.0000 2.0000 0.0000 Constraint 237 393 0.8000 1.0000 2.0000 0.0000 Constraint 237 385 0.8000 1.0000 2.0000 0.0000 Constraint 237 374 0.8000 1.0000 2.0000 0.0000 Constraint 237 362 0.8000 1.0000 2.0000 0.0000 Constraint 237 352 0.8000 1.0000 2.0000 0.0000 Constraint 237 343 0.8000 1.0000 2.0000 0.0000 Constraint 237 336 0.8000 1.0000 2.0000 0.0000 Constraint 237 331 0.8000 1.0000 2.0000 0.0000 Constraint 237 325 0.8000 1.0000 2.0000 0.0000 Constraint 237 319 0.8000 1.0000 2.0000 0.0000 Constraint 237 310 0.8000 1.0000 2.0000 0.0000 Constraint 237 303 0.8000 1.0000 2.0000 0.0000 Constraint 237 295 0.8000 1.0000 2.0000 0.0000 Constraint 237 289 0.8000 1.0000 2.0000 0.0000 Constraint 237 280 0.8000 1.0000 2.0000 0.0000 Constraint 237 273 0.8000 1.0000 2.0000 0.0000 Constraint 237 262 0.8000 1.0000 2.0000 0.0000 Constraint 237 254 0.8000 1.0000 2.0000 0.0000 Constraint 237 244 0.8000 1.0000 2.0000 0.0000 Constraint 228 729 0.8000 1.0000 2.0000 0.0000 Constraint 228 723 0.8000 1.0000 2.0000 0.0000 Constraint 228 716 0.8000 1.0000 2.0000 0.0000 Constraint 228 707 0.8000 1.0000 2.0000 0.0000 Constraint 228 665 0.8000 1.0000 2.0000 0.0000 Constraint 228 658 0.8000 1.0000 2.0000 0.0000 Constraint 228 650 0.8000 1.0000 2.0000 0.0000 Constraint 228 642 0.8000 1.0000 2.0000 0.0000 Constraint 228 635 0.8000 1.0000 2.0000 0.0000 Constraint 228 628 0.8000 1.0000 2.0000 0.0000 Constraint 228 619 0.8000 1.0000 2.0000 0.0000 Constraint 228 608 0.8000 1.0000 2.0000 0.0000 Constraint 228 598 0.8000 1.0000 2.0000 0.0000 Constraint 228 579 0.8000 1.0000 2.0000 0.0000 Constraint 228 572 0.8000 1.0000 2.0000 0.0000 Constraint 228 563 0.8000 1.0000 2.0000 0.0000 Constraint 228 556 0.8000 1.0000 2.0000 0.0000 Constraint 228 551 0.8000 1.0000 2.0000 0.0000 Constraint 228 542 0.8000 1.0000 2.0000 0.0000 Constraint 228 533 0.8000 1.0000 2.0000 0.0000 Constraint 228 486 0.8000 1.0000 2.0000 0.0000 Constraint 228 478 0.8000 1.0000 2.0000 0.0000 Constraint 228 471 0.8000 1.0000 2.0000 0.0000 Constraint 228 459 0.8000 1.0000 2.0000 0.0000 Constraint 228 452 0.8000 1.0000 2.0000 0.0000 Constraint 228 447 0.8000 1.0000 2.0000 0.0000 Constraint 228 431 0.8000 1.0000 2.0000 0.0000 Constraint 228 414 0.8000 1.0000 2.0000 0.0000 Constraint 228 402 0.8000 1.0000 2.0000 0.0000 Constraint 228 393 0.8000 1.0000 2.0000 0.0000 Constraint 228 385 0.8000 1.0000 2.0000 0.0000 Constraint 228 374 0.8000 1.0000 2.0000 0.0000 Constraint 228 362 0.8000 1.0000 2.0000 0.0000 Constraint 228 352 0.8000 1.0000 2.0000 0.0000 Constraint 228 343 0.8000 1.0000 2.0000 0.0000 Constraint 228 336 0.8000 1.0000 2.0000 0.0000 Constraint 228 331 0.8000 1.0000 2.0000 0.0000 Constraint 228 325 0.8000 1.0000 2.0000 0.0000 Constraint 228 319 0.8000 1.0000 2.0000 0.0000 Constraint 228 310 0.8000 1.0000 2.0000 0.0000 Constraint 228 303 0.8000 1.0000 2.0000 0.0000 Constraint 228 295 0.8000 1.0000 2.0000 0.0000 Constraint 228 289 0.8000 1.0000 2.0000 0.0000 Constraint 228 280 0.8000 1.0000 2.0000 0.0000 Constraint 228 273 0.8000 1.0000 2.0000 0.0000 Constraint 228 262 0.8000 1.0000 2.0000 0.0000 Constraint 228 254 0.8000 1.0000 2.0000 0.0000 Constraint 228 244 0.8000 1.0000 2.0000 0.0000 Constraint 228 237 0.8000 1.0000 2.0000 0.0000 Constraint 220 729 0.8000 1.0000 2.0000 0.0000 Constraint 220 723 0.8000 1.0000 2.0000 0.0000 Constraint 220 716 0.8000 1.0000 2.0000 0.0000 Constraint 220 707 0.8000 1.0000 2.0000 0.0000 Constraint 220 681 0.8000 1.0000 2.0000 0.0000 Constraint 220 665 0.8000 1.0000 2.0000 0.0000 Constraint 220 658 0.8000 1.0000 2.0000 0.0000 Constraint 220 650 0.8000 1.0000 2.0000 0.0000 Constraint 220 642 0.8000 1.0000 2.0000 0.0000 Constraint 220 635 0.8000 1.0000 2.0000 0.0000 Constraint 220 628 0.8000 1.0000 2.0000 0.0000 Constraint 220 619 0.8000 1.0000 2.0000 0.0000 Constraint 220 608 0.8000 1.0000 2.0000 0.0000 Constraint 220 598 0.8000 1.0000 2.0000 0.0000 Constraint 220 587 0.8000 1.0000 2.0000 0.0000 Constraint 220 579 0.8000 1.0000 2.0000 0.0000 Constraint 220 572 0.8000 1.0000 2.0000 0.0000 Constraint 220 563 0.8000 1.0000 2.0000 0.0000 Constraint 220 556 0.8000 1.0000 2.0000 0.0000 Constraint 220 542 0.8000 1.0000 2.0000 0.0000 Constraint 220 533 0.8000 1.0000 2.0000 0.0000 Constraint 220 478 0.8000 1.0000 2.0000 0.0000 Constraint 220 471 0.8000 1.0000 2.0000 0.0000 Constraint 220 459 0.8000 1.0000 2.0000 0.0000 Constraint 220 452 0.8000 1.0000 2.0000 0.0000 Constraint 220 447 0.8000 1.0000 2.0000 0.0000 Constraint 220 439 0.8000 1.0000 2.0000 0.0000 Constraint 220 431 0.8000 1.0000 2.0000 0.0000 Constraint 220 414 0.8000 1.0000 2.0000 0.0000 Constraint 220 402 0.8000 1.0000 2.0000 0.0000 Constraint 220 393 0.8000 1.0000 2.0000 0.0000 Constraint 220 385 0.8000 1.0000 2.0000 0.0000 Constraint 220 374 0.8000 1.0000 2.0000 0.0000 Constraint 220 362 0.8000 1.0000 2.0000 0.0000 Constraint 220 352 0.8000 1.0000 2.0000 0.0000 Constraint 220 343 0.8000 1.0000 2.0000 0.0000 Constraint 220 336 0.8000 1.0000 2.0000 0.0000 Constraint 220 331 0.8000 1.0000 2.0000 0.0000 Constraint 220 325 0.8000 1.0000 2.0000 0.0000 Constraint 220 319 0.8000 1.0000 2.0000 0.0000 Constraint 220 310 0.8000 1.0000 2.0000 0.0000 Constraint 220 303 0.8000 1.0000 2.0000 0.0000 Constraint 220 295 0.8000 1.0000 2.0000 0.0000 Constraint 220 289 0.8000 1.0000 2.0000 0.0000 Constraint 220 280 0.8000 1.0000 2.0000 0.0000 Constraint 220 273 0.8000 1.0000 2.0000 0.0000 Constraint 220 262 0.8000 1.0000 2.0000 0.0000 Constraint 220 254 0.8000 1.0000 2.0000 0.0000 Constraint 220 244 0.8000 1.0000 2.0000 0.0000 Constraint 220 237 0.8000 1.0000 2.0000 0.0000 Constraint 220 228 0.8000 1.0000 2.0000 0.0000 Constraint 211 729 0.8000 1.0000 2.0000 0.0000 Constraint 211 723 0.8000 1.0000 2.0000 0.0000 Constraint 211 716 0.8000 1.0000 2.0000 0.0000 Constraint 211 707 0.8000 1.0000 2.0000 0.0000 Constraint 211 665 0.8000 1.0000 2.0000 0.0000 Constraint 211 658 0.8000 1.0000 2.0000 0.0000 Constraint 211 650 0.8000 1.0000 2.0000 0.0000 Constraint 211 642 0.8000 1.0000 2.0000 0.0000 Constraint 211 635 0.8000 1.0000 2.0000 0.0000 Constraint 211 628 0.8000 1.0000 2.0000 0.0000 Constraint 211 619 0.8000 1.0000 2.0000 0.0000 Constraint 211 579 0.8000 1.0000 2.0000 0.0000 Constraint 211 572 0.8000 1.0000 2.0000 0.0000 Constraint 211 563 0.8000 1.0000 2.0000 0.0000 Constraint 211 542 0.8000 1.0000 2.0000 0.0000 Constraint 211 486 0.8000 1.0000 2.0000 0.0000 Constraint 211 478 0.8000 1.0000 2.0000 0.0000 Constraint 211 471 0.8000 1.0000 2.0000 0.0000 Constraint 211 459 0.8000 1.0000 2.0000 0.0000 Constraint 211 452 0.8000 1.0000 2.0000 0.0000 Constraint 211 447 0.8000 1.0000 2.0000 0.0000 Constraint 211 439 0.8000 1.0000 2.0000 0.0000 Constraint 211 414 0.8000 1.0000 2.0000 0.0000 Constraint 211 402 0.8000 1.0000 2.0000 0.0000 Constraint 211 393 0.8000 1.0000 2.0000 0.0000 Constraint 211 385 0.8000 1.0000 2.0000 0.0000 Constraint 211 374 0.8000 1.0000 2.0000 0.0000 Constraint 211 362 0.8000 1.0000 2.0000 0.0000 Constraint 211 352 0.8000 1.0000 2.0000 0.0000 Constraint 211 343 0.8000 1.0000 2.0000 0.0000 Constraint 211 336 0.8000 1.0000 2.0000 0.0000 Constraint 211 331 0.8000 1.0000 2.0000 0.0000 Constraint 211 325 0.8000 1.0000 2.0000 0.0000 Constraint 211 319 0.8000 1.0000 2.0000 0.0000 Constraint 211 310 0.8000 1.0000 2.0000 0.0000 Constraint 211 303 0.8000 1.0000 2.0000 0.0000 Constraint 211 273 0.8000 1.0000 2.0000 0.0000 Constraint 211 262 0.8000 1.0000 2.0000 0.0000 Constraint 211 254 0.8000 1.0000 2.0000 0.0000 Constraint 211 244 0.8000 1.0000 2.0000 0.0000 Constraint 211 237 0.8000 1.0000 2.0000 0.0000 Constraint 211 228 0.8000 1.0000 2.0000 0.0000 Constraint 211 220 0.8000 1.0000 2.0000 0.0000 Constraint 202 729 0.8000 1.0000 2.0000 0.0000 Constraint 202 723 0.8000 1.0000 2.0000 0.0000 Constraint 202 716 0.8000 1.0000 2.0000 0.0000 Constraint 202 707 0.8000 1.0000 2.0000 0.0000 Constraint 202 681 0.8000 1.0000 2.0000 0.0000 Constraint 202 673 0.8000 1.0000 2.0000 0.0000 Constraint 202 665 0.8000 1.0000 2.0000 0.0000 Constraint 202 658 0.8000 1.0000 2.0000 0.0000 Constraint 202 650 0.8000 1.0000 2.0000 0.0000 Constraint 202 642 0.8000 1.0000 2.0000 0.0000 Constraint 202 635 0.8000 1.0000 2.0000 0.0000 Constraint 202 628 0.8000 1.0000 2.0000 0.0000 Constraint 202 619 0.8000 1.0000 2.0000 0.0000 Constraint 202 608 0.8000 1.0000 2.0000 0.0000 Constraint 202 598 0.8000 1.0000 2.0000 0.0000 Constraint 202 587 0.8000 1.0000 2.0000 0.0000 Constraint 202 579 0.8000 1.0000 2.0000 0.0000 Constraint 202 572 0.8000 1.0000 2.0000 0.0000 Constraint 202 563 0.8000 1.0000 2.0000 0.0000 Constraint 202 556 0.8000 1.0000 2.0000 0.0000 Constraint 202 551 0.8000 1.0000 2.0000 0.0000 Constraint 202 542 0.8000 1.0000 2.0000 0.0000 Constraint 202 533 0.8000 1.0000 2.0000 0.0000 Constraint 202 486 0.8000 1.0000 2.0000 0.0000 Constraint 202 478 0.8000 1.0000 2.0000 0.0000 Constraint 202 471 0.8000 1.0000 2.0000 0.0000 Constraint 202 459 0.8000 1.0000 2.0000 0.0000 Constraint 202 452 0.8000 1.0000 2.0000 0.0000 Constraint 202 447 0.8000 1.0000 2.0000 0.0000 Constraint 202 439 0.8000 1.0000 2.0000 0.0000 Constraint 202 431 0.8000 1.0000 2.0000 0.0000 Constraint 202 414 0.8000 1.0000 2.0000 0.0000 Constraint 202 393 0.8000 1.0000 2.0000 0.0000 Constraint 202 385 0.8000 1.0000 2.0000 0.0000 Constraint 202 374 0.8000 1.0000 2.0000 0.0000 Constraint 202 362 0.8000 1.0000 2.0000 0.0000 Constraint 202 352 0.8000 1.0000 2.0000 0.0000 Constraint 202 343 0.8000 1.0000 2.0000 0.0000 Constraint 202 336 0.8000 1.0000 2.0000 0.0000 Constraint 202 331 0.8000 1.0000 2.0000 0.0000 Constraint 202 325 0.8000 1.0000 2.0000 0.0000 Constraint 202 319 0.8000 1.0000 2.0000 0.0000 Constraint 202 310 0.8000 1.0000 2.0000 0.0000 Constraint 202 303 0.8000 1.0000 2.0000 0.0000 Constraint 202 262 0.8000 1.0000 2.0000 0.0000 Constraint 202 254 0.8000 1.0000 2.0000 0.0000 Constraint 202 244 0.8000 1.0000 2.0000 0.0000 Constraint 202 237 0.8000 1.0000 2.0000 0.0000 Constraint 202 228 0.8000 1.0000 2.0000 0.0000 Constraint 202 220 0.8000 1.0000 2.0000 0.0000 Constraint 202 211 0.8000 1.0000 2.0000 0.0000 Constraint 194 729 0.8000 1.0000 2.0000 0.0000 Constraint 194 723 0.8000 1.0000 2.0000 0.0000 Constraint 194 716 0.8000 1.0000 2.0000 0.0000 Constraint 194 707 0.8000 1.0000 2.0000 0.0000 Constraint 194 681 0.8000 1.0000 2.0000 0.0000 Constraint 194 665 0.8000 1.0000 2.0000 0.0000 Constraint 194 658 0.8000 1.0000 2.0000 0.0000 Constraint 194 650 0.8000 1.0000 2.0000 0.0000 Constraint 194 642 0.8000 1.0000 2.0000 0.0000 Constraint 194 635 0.8000 1.0000 2.0000 0.0000 Constraint 194 628 0.8000 1.0000 2.0000 0.0000 Constraint 194 619 0.8000 1.0000 2.0000 0.0000 Constraint 194 608 0.8000 1.0000 2.0000 0.0000 Constraint 194 598 0.8000 1.0000 2.0000 0.0000 Constraint 194 587 0.8000 1.0000 2.0000 0.0000 Constraint 194 579 0.8000 1.0000 2.0000 0.0000 Constraint 194 572 0.8000 1.0000 2.0000 0.0000 Constraint 194 563 0.8000 1.0000 2.0000 0.0000 Constraint 194 556 0.8000 1.0000 2.0000 0.0000 Constraint 194 551 0.8000 1.0000 2.0000 0.0000 Constraint 194 486 0.8000 1.0000 2.0000 0.0000 Constraint 194 478 0.8000 1.0000 2.0000 0.0000 Constraint 194 471 0.8000 1.0000 2.0000 0.0000 Constraint 194 459 0.8000 1.0000 2.0000 0.0000 Constraint 194 452 0.8000 1.0000 2.0000 0.0000 Constraint 194 447 0.8000 1.0000 2.0000 0.0000 Constraint 194 414 0.8000 1.0000 2.0000 0.0000 Constraint 194 402 0.8000 1.0000 2.0000 0.0000 Constraint 194 393 0.8000 1.0000 2.0000 0.0000 Constraint 194 374 0.8000 1.0000 2.0000 0.0000 Constraint 194 362 0.8000 1.0000 2.0000 0.0000 Constraint 194 352 0.8000 1.0000 2.0000 0.0000 Constraint 194 331 0.8000 1.0000 2.0000 0.0000 Constraint 194 319 0.8000 1.0000 2.0000 0.0000 Constraint 194 254 0.8000 1.0000 2.0000 0.0000 Constraint 194 244 0.8000 1.0000 2.0000 0.0000 Constraint 194 237 0.8000 1.0000 2.0000 0.0000 Constraint 194 228 0.8000 1.0000 2.0000 0.0000 Constraint 194 220 0.8000 1.0000 2.0000 0.0000 Constraint 194 211 0.8000 1.0000 2.0000 0.0000 Constraint 194 202 0.8000 1.0000 2.0000 0.0000 Constraint 182 729 0.8000 1.0000 2.0000 0.0000 Constraint 182 723 0.8000 1.0000 2.0000 0.0000 Constraint 182 716 0.8000 1.0000 2.0000 0.0000 Constraint 182 707 0.8000 1.0000 2.0000 0.0000 Constraint 182 665 0.8000 1.0000 2.0000 0.0000 Constraint 182 658 0.8000 1.0000 2.0000 0.0000 Constraint 182 642 0.8000 1.0000 2.0000 0.0000 Constraint 182 628 0.8000 1.0000 2.0000 0.0000 Constraint 182 619 0.8000 1.0000 2.0000 0.0000 Constraint 182 608 0.8000 1.0000 2.0000 0.0000 Constraint 182 598 0.8000 1.0000 2.0000 0.0000 Constraint 182 587 0.8000 1.0000 2.0000 0.0000 Constraint 182 572 0.8000 1.0000 2.0000 0.0000 Constraint 182 556 0.8000 1.0000 2.0000 0.0000 Constraint 182 551 0.8000 1.0000 2.0000 0.0000 Constraint 182 478 0.8000 1.0000 2.0000 0.0000 Constraint 182 471 0.8000 1.0000 2.0000 0.0000 Constraint 182 459 0.8000 1.0000 2.0000 0.0000 Constraint 182 452 0.8000 1.0000 2.0000 0.0000 Constraint 182 447 0.8000 1.0000 2.0000 0.0000 Constraint 182 439 0.8000 1.0000 2.0000 0.0000 Constraint 182 402 0.8000 1.0000 2.0000 0.0000 Constraint 182 393 0.8000 1.0000 2.0000 0.0000 Constraint 182 385 0.8000 1.0000 2.0000 0.0000 Constraint 182 374 0.8000 1.0000 2.0000 0.0000 Constraint 182 362 0.8000 1.0000 2.0000 0.0000 Constraint 182 352 0.8000 1.0000 2.0000 0.0000 Constraint 182 343 0.8000 1.0000 2.0000 0.0000 Constraint 182 319 0.8000 1.0000 2.0000 0.0000 Constraint 182 310 0.8000 1.0000 2.0000 0.0000 Constraint 182 303 0.8000 1.0000 2.0000 0.0000 Constraint 182 295 0.8000 1.0000 2.0000 0.0000 Constraint 182 289 0.8000 1.0000 2.0000 0.0000 Constraint 182 244 0.8000 1.0000 2.0000 0.0000 Constraint 182 237 0.8000 1.0000 2.0000 0.0000 Constraint 182 228 0.8000 1.0000 2.0000 0.0000 Constraint 182 220 0.8000 1.0000 2.0000 0.0000 Constraint 182 211 0.8000 1.0000 2.0000 0.0000 Constraint 182 202 0.8000 1.0000 2.0000 0.0000 Constraint 182 194 0.8000 1.0000 2.0000 0.0000 Constraint 170 729 0.8000 1.0000 2.0000 0.0000 Constraint 170 723 0.8000 1.0000 2.0000 0.0000 Constraint 170 716 0.8000 1.0000 2.0000 0.0000 Constraint 170 707 0.8000 1.0000 2.0000 0.0000 Constraint 170 692 0.8000 1.0000 2.0000 0.0000 Constraint 170 681 0.8000 1.0000 2.0000 0.0000 Constraint 170 673 0.8000 1.0000 2.0000 0.0000 Constraint 170 665 0.8000 1.0000 2.0000 0.0000 Constraint 170 658 0.8000 1.0000 2.0000 0.0000 Constraint 170 650 0.8000 1.0000 2.0000 0.0000 Constraint 170 642 0.8000 1.0000 2.0000 0.0000 Constraint 170 635 0.8000 1.0000 2.0000 0.0000 Constraint 170 628 0.8000 1.0000 2.0000 0.0000 Constraint 170 619 0.8000 1.0000 2.0000 0.0000 Constraint 170 598 0.8000 1.0000 2.0000 0.0000 Constraint 170 478 0.8000 1.0000 2.0000 0.0000 Constraint 170 471 0.8000 1.0000 2.0000 0.0000 Constraint 170 459 0.8000 1.0000 2.0000 0.0000 Constraint 170 452 0.8000 1.0000 2.0000 0.0000 Constraint 170 447 0.8000 1.0000 2.0000 0.0000 Constraint 170 439 0.8000 1.0000 2.0000 0.0000 Constraint 170 414 0.8000 1.0000 2.0000 0.0000 Constraint 170 402 0.8000 1.0000 2.0000 0.0000 Constraint 170 393 0.8000 1.0000 2.0000 0.0000 Constraint 170 385 0.8000 1.0000 2.0000 0.0000 Constraint 170 374 0.8000 1.0000 2.0000 0.0000 Constraint 170 362 0.8000 1.0000 2.0000 0.0000 Constraint 170 352 0.8000 1.0000 2.0000 0.0000 Constraint 170 343 0.8000 1.0000 2.0000 0.0000 Constraint 170 336 0.8000 1.0000 2.0000 0.0000 Constraint 170 319 0.8000 1.0000 2.0000 0.0000 Constraint 170 310 0.8000 1.0000 2.0000 0.0000 Constraint 170 303 0.8000 1.0000 2.0000 0.0000 Constraint 170 295 0.8000 1.0000 2.0000 0.0000 Constraint 170 289 0.8000 1.0000 2.0000 0.0000 Constraint 170 237 0.8000 1.0000 2.0000 0.0000 Constraint 170 228 0.8000 1.0000 2.0000 0.0000 Constraint 170 220 0.8000 1.0000 2.0000 0.0000 Constraint 170 211 0.8000 1.0000 2.0000 0.0000 Constraint 170 202 0.8000 1.0000 2.0000 0.0000 Constraint 170 194 0.8000 1.0000 2.0000 0.0000 Constraint 170 182 0.8000 1.0000 2.0000 0.0000 Constraint 161 729 0.8000 1.0000 2.0000 0.0000 Constraint 161 716 0.8000 1.0000 2.0000 0.0000 Constraint 161 707 0.8000 1.0000 2.0000 0.0000 Constraint 161 692 0.8000 1.0000 2.0000 0.0000 Constraint 161 681 0.8000 1.0000 2.0000 0.0000 Constraint 161 673 0.8000 1.0000 2.0000 0.0000 Constraint 161 665 0.8000 1.0000 2.0000 0.0000 Constraint 161 658 0.8000 1.0000 2.0000 0.0000 Constraint 161 650 0.8000 1.0000 2.0000 0.0000 Constraint 161 642 0.8000 1.0000 2.0000 0.0000 Constraint 161 635 0.8000 1.0000 2.0000 0.0000 Constraint 161 628 0.8000 1.0000 2.0000 0.0000 Constraint 161 619 0.8000 1.0000 2.0000 0.0000 Constraint 161 608 0.8000 1.0000 2.0000 0.0000 Constraint 161 598 0.8000 1.0000 2.0000 0.0000 Constraint 161 587 0.8000 1.0000 2.0000 0.0000 Constraint 161 579 0.8000 1.0000 2.0000 0.0000 Constraint 161 563 0.8000 1.0000 2.0000 0.0000 Constraint 161 556 0.8000 1.0000 2.0000 0.0000 Constraint 161 542 0.8000 1.0000 2.0000 0.0000 Constraint 161 533 0.8000 1.0000 2.0000 0.0000 Constraint 161 518 0.8000 1.0000 2.0000 0.0000 Constraint 161 494 0.8000 1.0000 2.0000 0.0000 Constraint 161 486 0.8000 1.0000 2.0000 0.0000 Constraint 161 478 0.8000 1.0000 2.0000 0.0000 Constraint 161 471 0.8000 1.0000 2.0000 0.0000 Constraint 161 459 0.8000 1.0000 2.0000 0.0000 Constraint 161 452 0.8000 1.0000 2.0000 0.0000 Constraint 161 447 0.8000 1.0000 2.0000 0.0000 Constraint 161 439 0.8000 1.0000 2.0000 0.0000 Constraint 161 414 0.8000 1.0000 2.0000 0.0000 Constraint 161 402 0.8000 1.0000 2.0000 0.0000 Constraint 161 393 0.8000 1.0000 2.0000 0.0000 Constraint 161 374 0.8000 1.0000 2.0000 0.0000 Constraint 161 362 0.8000 1.0000 2.0000 0.0000 Constraint 161 352 0.8000 1.0000 2.0000 0.0000 Constraint 161 343 0.8000 1.0000 2.0000 0.0000 Constraint 161 331 0.8000 1.0000 2.0000 0.0000 Constraint 161 325 0.8000 1.0000 2.0000 0.0000 Constraint 161 319 0.8000 1.0000 2.0000 0.0000 Constraint 161 310 0.8000 1.0000 2.0000 0.0000 Constraint 161 220 0.8000 1.0000 2.0000 0.0000 Constraint 161 211 0.8000 1.0000 2.0000 0.0000 Constraint 161 202 0.8000 1.0000 2.0000 0.0000 Constraint 161 194 0.8000 1.0000 2.0000 0.0000 Constraint 161 182 0.8000 1.0000 2.0000 0.0000 Constraint 161 170 0.8000 1.0000 2.0000 0.0000 Constraint 153 729 0.8000 1.0000 2.0000 0.0000 Constraint 153 723 0.8000 1.0000 2.0000 0.0000 Constraint 153 716 0.8000 1.0000 2.0000 0.0000 Constraint 153 707 0.8000 1.0000 2.0000 0.0000 Constraint 153 692 0.8000 1.0000 2.0000 0.0000 Constraint 153 681 0.8000 1.0000 2.0000 0.0000 Constraint 153 673 0.8000 1.0000 2.0000 0.0000 Constraint 153 665 0.8000 1.0000 2.0000 0.0000 Constraint 153 658 0.8000 1.0000 2.0000 0.0000 Constraint 153 650 0.8000 1.0000 2.0000 0.0000 Constraint 153 642 0.8000 1.0000 2.0000 0.0000 Constraint 153 635 0.8000 1.0000 2.0000 0.0000 Constraint 153 628 0.8000 1.0000 2.0000 0.0000 Constraint 153 619 0.8000 1.0000 2.0000 0.0000 Constraint 153 587 0.8000 1.0000 2.0000 0.0000 Constraint 153 572 0.8000 1.0000 2.0000 0.0000 Constraint 153 563 0.8000 1.0000 2.0000 0.0000 Constraint 153 542 0.8000 1.0000 2.0000 0.0000 Constraint 153 533 0.8000 1.0000 2.0000 0.0000 Constraint 153 518 0.8000 1.0000 2.0000 0.0000 Constraint 153 494 0.8000 1.0000 2.0000 0.0000 Constraint 153 478 0.8000 1.0000 2.0000 0.0000 Constraint 153 471 0.8000 1.0000 2.0000 0.0000 Constraint 153 459 0.8000 1.0000 2.0000 0.0000 Constraint 153 447 0.8000 1.0000 2.0000 0.0000 Constraint 153 439 0.8000 1.0000 2.0000 0.0000 Constraint 153 414 0.8000 1.0000 2.0000 0.0000 Constraint 153 402 0.8000 1.0000 2.0000 0.0000 Constraint 153 393 0.8000 1.0000 2.0000 0.0000 Constraint 153 385 0.8000 1.0000 2.0000 0.0000 Constraint 153 374 0.8000 1.0000 2.0000 0.0000 Constraint 153 362 0.8000 1.0000 2.0000 0.0000 Constraint 153 352 0.8000 1.0000 2.0000 0.0000 Constraint 153 343 0.8000 1.0000 2.0000 0.0000 Constraint 153 336 0.8000 1.0000 2.0000 0.0000 Constraint 153 331 0.8000 1.0000 2.0000 0.0000 Constraint 153 325 0.8000 1.0000 2.0000 0.0000 Constraint 153 319 0.8000 1.0000 2.0000 0.0000 Constraint 153 310 0.8000 1.0000 2.0000 0.0000 Constraint 153 303 0.8000 1.0000 2.0000 0.0000 Constraint 153 220 0.8000 1.0000 2.0000 0.0000 Constraint 153 211 0.8000 1.0000 2.0000 0.0000 Constraint 153 202 0.8000 1.0000 2.0000 0.0000 Constraint 153 194 0.8000 1.0000 2.0000 0.0000 Constraint 153 182 0.8000 1.0000 2.0000 0.0000 Constraint 153 170 0.8000 1.0000 2.0000 0.0000 Constraint 153 161 0.8000 1.0000 2.0000 0.0000 Constraint 146 729 0.8000 1.0000 2.0000 0.0000 Constraint 146 723 0.8000 1.0000 2.0000 0.0000 Constraint 146 716 0.8000 1.0000 2.0000 0.0000 Constraint 146 707 0.8000 1.0000 2.0000 0.0000 Constraint 146 692 0.8000 1.0000 2.0000 0.0000 Constraint 146 681 0.8000 1.0000 2.0000 0.0000 Constraint 146 673 0.8000 1.0000 2.0000 0.0000 Constraint 146 665 0.8000 1.0000 2.0000 0.0000 Constraint 146 658 0.8000 1.0000 2.0000 0.0000 Constraint 146 650 0.8000 1.0000 2.0000 0.0000 Constraint 146 642 0.8000 1.0000 2.0000 0.0000 Constraint 146 635 0.8000 1.0000 2.0000 0.0000 Constraint 146 628 0.8000 1.0000 2.0000 0.0000 Constraint 146 619 0.8000 1.0000 2.0000 0.0000 Constraint 146 608 0.8000 1.0000 2.0000 0.0000 Constraint 146 598 0.8000 1.0000 2.0000 0.0000 Constraint 146 587 0.8000 1.0000 2.0000 0.0000 Constraint 146 579 0.8000 1.0000 2.0000 0.0000 Constraint 146 572 0.8000 1.0000 2.0000 0.0000 Constraint 146 563 0.8000 1.0000 2.0000 0.0000 Constraint 146 551 0.8000 1.0000 2.0000 0.0000 Constraint 146 542 0.8000 1.0000 2.0000 0.0000 Constraint 146 533 0.8000 1.0000 2.0000 0.0000 Constraint 146 518 0.8000 1.0000 2.0000 0.0000 Constraint 146 494 0.8000 1.0000 2.0000 0.0000 Constraint 146 486 0.8000 1.0000 2.0000 0.0000 Constraint 146 478 0.8000 1.0000 2.0000 0.0000 Constraint 146 471 0.8000 1.0000 2.0000 0.0000 Constraint 146 459 0.8000 1.0000 2.0000 0.0000 Constraint 146 452 0.8000 1.0000 2.0000 0.0000 Constraint 146 447 0.8000 1.0000 2.0000 0.0000 Constraint 146 439 0.8000 1.0000 2.0000 0.0000 Constraint 146 431 0.8000 1.0000 2.0000 0.0000 Constraint 146 422 0.8000 1.0000 2.0000 0.0000 Constraint 146 414 0.8000 1.0000 2.0000 0.0000 Constraint 146 393 0.8000 1.0000 2.0000 0.0000 Constraint 146 385 0.8000 1.0000 2.0000 0.0000 Constraint 146 374 0.8000 1.0000 2.0000 0.0000 Constraint 146 362 0.8000 1.0000 2.0000 0.0000 Constraint 146 352 0.8000 1.0000 2.0000 0.0000 Constraint 146 319 0.8000 1.0000 2.0000 0.0000 Constraint 146 244 0.8000 1.0000 2.0000 0.0000 Constraint 146 237 0.8000 1.0000 2.0000 0.0000 Constraint 146 228 0.8000 1.0000 2.0000 0.0000 Constraint 146 220 0.8000 1.0000 2.0000 0.0000 Constraint 146 211 0.8000 1.0000 2.0000 0.0000 Constraint 146 202 0.8000 1.0000 2.0000 0.0000 Constraint 146 194 0.8000 1.0000 2.0000 0.0000 Constraint 146 182 0.8000 1.0000 2.0000 0.0000 Constraint 146 170 0.8000 1.0000 2.0000 0.0000 Constraint 146 161 0.8000 1.0000 2.0000 0.0000 Constraint 146 153 0.8000 1.0000 2.0000 0.0000 Constraint 138 729 0.8000 1.0000 2.0000 0.0000 Constraint 138 723 0.8000 1.0000 2.0000 0.0000 Constraint 138 716 0.8000 1.0000 2.0000 0.0000 Constraint 138 707 0.8000 1.0000 2.0000 0.0000 Constraint 138 692 0.8000 1.0000 2.0000 0.0000 Constraint 138 681 0.8000 1.0000 2.0000 0.0000 Constraint 138 673 0.8000 1.0000 2.0000 0.0000 Constraint 138 665 0.8000 1.0000 2.0000 0.0000 Constraint 138 642 0.8000 1.0000 2.0000 0.0000 Constraint 138 628 0.8000 1.0000 2.0000 0.0000 Constraint 138 619 0.8000 1.0000 2.0000 0.0000 Constraint 138 608 0.8000 1.0000 2.0000 0.0000 Constraint 138 598 0.8000 1.0000 2.0000 0.0000 Constraint 138 587 0.8000 1.0000 2.0000 0.0000 Constraint 138 572 0.8000 1.0000 2.0000 0.0000 Constraint 138 563 0.8000 1.0000 2.0000 0.0000 Constraint 138 533 0.8000 1.0000 2.0000 0.0000 Constraint 138 518 0.8000 1.0000 2.0000 0.0000 Constraint 138 494 0.8000 1.0000 2.0000 0.0000 Constraint 138 486 0.8000 1.0000 2.0000 0.0000 Constraint 138 478 0.8000 1.0000 2.0000 0.0000 Constraint 138 471 0.8000 1.0000 2.0000 0.0000 Constraint 138 459 0.8000 1.0000 2.0000 0.0000 Constraint 138 452 0.8000 1.0000 2.0000 0.0000 Constraint 138 447 0.8000 1.0000 2.0000 0.0000 Constraint 138 439 0.8000 1.0000 2.0000 0.0000 Constraint 138 422 0.8000 1.0000 2.0000 0.0000 Constraint 138 414 0.8000 1.0000 2.0000 0.0000 Constraint 138 362 0.8000 1.0000 2.0000 0.0000 Constraint 138 352 0.8000 1.0000 2.0000 0.0000 Constraint 138 319 0.8000 1.0000 2.0000 0.0000 Constraint 138 244 0.8000 1.0000 2.0000 0.0000 Constraint 138 237 0.8000 1.0000 2.0000 0.0000 Constraint 138 228 0.8000 1.0000 2.0000 0.0000 Constraint 138 220 0.8000 1.0000 2.0000 0.0000 Constraint 138 211 0.8000 1.0000 2.0000 0.0000 Constraint 138 202 0.8000 1.0000 2.0000 0.0000 Constraint 138 194 0.8000 1.0000 2.0000 0.0000 Constraint 138 182 0.8000 1.0000 2.0000 0.0000 Constraint 138 170 0.8000 1.0000 2.0000 0.0000 Constraint 138 161 0.8000 1.0000 2.0000 0.0000 Constraint 138 153 0.8000 1.0000 2.0000 0.0000 Constraint 138 146 0.8000 1.0000 2.0000 0.0000 Constraint 126 729 0.8000 1.0000 2.0000 0.0000 Constraint 126 723 0.8000 1.0000 2.0000 0.0000 Constraint 126 716 0.8000 1.0000 2.0000 0.0000 Constraint 126 707 0.8000 1.0000 2.0000 0.0000 Constraint 126 692 0.8000 1.0000 2.0000 0.0000 Constraint 126 681 0.8000 1.0000 2.0000 0.0000 Constraint 126 673 0.8000 1.0000 2.0000 0.0000 Constraint 126 665 0.8000 1.0000 2.0000 0.0000 Constraint 126 628 0.8000 1.0000 2.0000 0.0000 Constraint 126 619 0.8000 1.0000 2.0000 0.0000 Constraint 126 598 0.8000 1.0000 2.0000 0.0000 Constraint 126 572 0.8000 1.0000 2.0000 0.0000 Constraint 126 556 0.8000 1.0000 2.0000 0.0000 Constraint 126 533 0.8000 1.0000 2.0000 0.0000 Constraint 126 525 0.8000 1.0000 2.0000 0.0000 Constraint 126 518 0.8000 1.0000 2.0000 0.0000 Constraint 126 494 0.8000 1.0000 2.0000 0.0000 Constraint 126 486 0.8000 1.0000 2.0000 0.0000 Constraint 126 478 0.8000 1.0000 2.0000 0.0000 Constraint 126 471 0.8000 1.0000 2.0000 0.0000 Constraint 126 447 0.8000 1.0000 2.0000 0.0000 Constraint 126 439 0.8000 1.0000 2.0000 0.0000 Constraint 126 414 0.8000 1.0000 2.0000 0.0000 Constraint 126 402 0.8000 1.0000 2.0000 0.0000 Constraint 126 393 0.8000 1.0000 2.0000 0.0000 Constraint 126 362 0.8000 1.0000 2.0000 0.0000 Constraint 126 352 0.8000 1.0000 2.0000 0.0000 Constraint 126 343 0.8000 1.0000 2.0000 0.0000 Constraint 126 319 0.8000 1.0000 2.0000 0.0000 Constraint 126 310 0.8000 1.0000 2.0000 0.0000 Constraint 126 289 0.8000 1.0000 2.0000 0.0000 Constraint 126 280 0.8000 1.0000 2.0000 0.0000 Constraint 126 228 0.8000 1.0000 2.0000 0.0000 Constraint 126 220 0.8000 1.0000 2.0000 0.0000 Constraint 126 211 0.8000 1.0000 2.0000 0.0000 Constraint 126 194 0.8000 1.0000 2.0000 0.0000 Constraint 126 182 0.8000 1.0000 2.0000 0.0000 Constraint 126 170 0.8000 1.0000 2.0000 0.0000 Constraint 126 161 0.8000 1.0000 2.0000 0.0000 Constraint 126 153 0.8000 1.0000 2.0000 0.0000 Constraint 126 146 0.8000 1.0000 2.0000 0.0000 Constraint 126 138 0.8000 1.0000 2.0000 0.0000 Constraint 113 729 0.8000 1.0000 2.0000 0.0000 Constraint 113 723 0.8000 1.0000 2.0000 0.0000 Constraint 113 716 0.8000 1.0000 2.0000 0.0000 Constraint 113 707 0.8000 1.0000 2.0000 0.0000 Constraint 113 692 0.8000 1.0000 2.0000 0.0000 Constraint 113 681 0.8000 1.0000 2.0000 0.0000 Constraint 113 673 0.8000 1.0000 2.0000 0.0000 Constraint 113 665 0.8000 1.0000 2.0000 0.0000 Constraint 113 658 0.8000 1.0000 2.0000 0.0000 Constraint 113 650 0.8000 1.0000 2.0000 0.0000 Constraint 113 642 0.8000 1.0000 2.0000 0.0000 Constraint 113 635 0.8000 1.0000 2.0000 0.0000 Constraint 113 572 0.8000 1.0000 2.0000 0.0000 Constraint 113 563 0.8000 1.0000 2.0000 0.0000 Constraint 113 551 0.8000 1.0000 2.0000 0.0000 Constraint 113 542 0.8000 1.0000 2.0000 0.0000 Constraint 113 533 0.8000 1.0000 2.0000 0.0000 Constraint 113 525 0.8000 1.0000 2.0000 0.0000 Constraint 113 518 0.8000 1.0000 2.0000 0.0000 Constraint 113 494 0.8000 1.0000 2.0000 0.0000 Constraint 113 486 0.8000 1.0000 2.0000 0.0000 Constraint 113 478 0.8000 1.0000 2.0000 0.0000 Constraint 113 471 0.8000 1.0000 2.0000 0.0000 Constraint 113 459 0.8000 1.0000 2.0000 0.0000 Constraint 113 452 0.8000 1.0000 2.0000 0.0000 Constraint 113 447 0.8000 1.0000 2.0000 0.0000 Constraint 113 439 0.8000 1.0000 2.0000 0.0000 Constraint 113 431 0.8000 1.0000 2.0000 0.0000 Constraint 113 422 0.8000 1.0000 2.0000 0.0000 Constraint 113 414 0.8000 1.0000 2.0000 0.0000 Constraint 113 402 0.8000 1.0000 2.0000 0.0000 Constraint 113 393 0.8000 1.0000 2.0000 0.0000 Constraint 113 385 0.8000 1.0000 2.0000 0.0000 Constraint 113 374 0.8000 1.0000 2.0000 0.0000 Constraint 113 362 0.8000 1.0000 2.0000 0.0000 Constraint 113 352 0.8000 1.0000 2.0000 0.0000 Constraint 113 343 0.8000 1.0000 2.0000 0.0000 Constraint 113 310 0.8000 1.0000 2.0000 0.0000 Constraint 113 295 0.8000 1.0000 2.0000 0.0000 Constraint 113 289 0.8000 1.0000 2.0000 0.0000 Constraint 113 273 0.8000 1.0000 2.0000 0.0000 Constraint 113 244 0.8000 1.0000 2.0000 0.0000 Constraint 113 237 0.8000 1.0000 2.0000 0.0000 Constraint 113 228 0.8000 1.0000 2.0000 0.0000 Constraint 113 220 0.8000 1.0000 2.0000 0.0000 Constraint 113 211 0.8000 1.0000 2.0000 0.0000 Constraint 113 202 0.8000 1.0000 2.0000 0.0000 Constraint 113 194 0.8000 1.0000 2.0000 0.0000 Constraint 113 182 0.8000 1.0000 2.0000 0.0000 Constraint 113 170 0.8000 1.0000 2.0000 0.0000 Constraint 113 161 0.8000 1.0000 2.0000 0.0000 Constraint 113 153 0.8000 1.0000 2.0000 0.0000 Constraint 113 146 0.8000 1.0000 2.0000 0.0000 Constraint 113 138 0.8000 1.0000 2.0000 0.0000 Constraint 113 126 0.8000 1.0000 2.0000 0.0000 Constraint 106 729 0.8000 1.0000 2.0000 0.0000 Constraint 106 723 0.8000 1.0000 2.0000 0.0000 Constraint 106 716 0.8000 1.0000 2.0000 0.0000 Constraint 106 707 0.8000 1.0000 2.0000 0.0000 Constraint 106 692 0.8000 1.0000 2.0000 0.0000 Constraint 106 681 0.8000 1.0000 2.0000 0.0000 Constraint 106 673 0.8000 1.0000 2.0000 0.0000 Constraint 106 665 0.8000 1.0000 2.0000 0.0000 Constraint 106 658 0.8000 1.0000 2.0000 0.0000 Constraint 106 650 0.8000 1.0000 2.0000 0.0000 Constraint 106 642 0.8000 1.0000 2.0000 0.0000 Constraint 106 572 0.8000 1.0000 2.0000 0.0000 Constraint 106 563 0.8000 1.0000 2.0000 0.0000 Constraint 106 556 0.8000 1.0000 2.0000 0.0000 Constraint 106 551 0.8000 1.0000 2.0000 0.0000 Constraint 106 542 0.8000 1.0000 2.0000 0.0000 Constraint 106 533 0.8000 1.0000 2.0000 0.0000 Constraint 106 525 0.8000 1.0000 2.0000 0.0000 Constraint 106 518 0.8000 1.0000 2.0000 0.0000 Constraint 106 494 0.8000 1.0000 2.0000 0.0000 Constraint 106 486 0.8000 1.0000 2.0000 0.0000 Constraint 106 478 0.8000 1.0000 2.0000 0.0000 Constraint 106 471 0.8000 1.0000 2.0000 0.0000 Constraint 106 459 0.8000 1.0000 2.0000 0.0000 Constraint 106 452 0.8000 1.0000 2.0000 0.0000 Constraint 106 447 0.8000 1.0000 2.0000 0.0000 Constraint 106 439 0.8000 1.0000 2.0000 0.0000 Constraint 106 422 0.8000 1.0000 2.0000 0.0000 Constraint 106 414 0.8000 1.0000 2.0000 0.0000 Constraint 106 402 0.8000 1.0000 2.0000 0.0000 Constraint 106 393 0.8000 1.0000 2.0000 0.0000 Constraint 106 385 0.8000 1.0000 2.0000 0.0000 Constraint 106 374 0.8000 1.0000 2.0000 0.0000 Constraint 106 362 0.8000 1.0000 2.0000 0.0000 Constraint 106 343 0.8000 1.0000 2.0000 0.0000 Constraint 106 336 0.8000 1.0000 2.0000 0.0000 Constraint 106 310 0.8000 1.0000 2.0000 0.0000 Constraint 106 295 0.8000 1.0000 2.0000 0.0000 Constraint 106 237 0.8000 1.0000 2.0000 0.0000 Constraint 106 220 0.8000 1.0000 2.0000 0.0000 Constraint 106 211 0.8000 1.0000 2.0000 0.0000 Constraint 106 202 0.8000 1.0000 2.0000 0.0000 Constraint 106 182 0.8000 1.0000 2.0000 0.0000 Constraint 106 170 0.8000 1.0000 2.0000 0.0000 Constraint 106 161 0.8000 1.0000 2.0000 0.0000 Constraint 106 153 0.8000 1.0000 2.0000 0.0000 Constraint 106 146 0.8000 1.0000 2.0000 0.0000 Constraint 106 138 0.8000 1.0000 2.0000 0.0000 Constraint 106 126 0.8000 1.0000 2.0000 0.0000 Constraint 106 113 0.8000 1.0000 2.0000 0.0000 Constraint 98 729 0.8000 1.0000 2.0000 0.0000 Constraint 98 723 0.8000 1.0000 2.0000 0.0000 Constraint 98 716 0.8000 1.0000 2.0000 0.0000 Constraint 98 707 0.8000 1.0000 2.0000 0.0000 Constraint 98 692 0.8000 1.0000 2.0000 0.0000 Constraint 98 681 0.8000 1.0000 2.0000 0.0000 Constraint 98 673 0.8000 1.0000 2.0000 0.0000 Constraint 98 665 0.8000 1.0000 2.0000 0.0000 Constraint 98 658 0.8000 1.0000 2.0000 0.0000 Constraint 98 650 0.8000 1.0000 2.0000 0.0000 Constraint 98 642 0.8000 1.0000 2.0000 0.0000 Constraint 98 579 0.8000 1.0000 2.0000 0.0000 Constraint 98 572 0.8000 1.0000 2.0000 0.0000 Constraint 98 563 0.8000 1.0000 2.0000 0.0000 Constraint 98 556 0.8000 1.0000 2.0000 0.0000 Constraint 98 551 0.8000 1.0000 2.0000 0.0000 Constraint 98 542 0.8000 1.0000 2.0000 0.0000 Constraint 98 533 0.8000 1.0000 2.0000 0.0000 Constraint 98 525 0.8000 1.0000 2.0000 0.0000 Constraint 98 518 0.8000 1.0000 2.0000 0.0000 Constraint 98 507 0.8000 1.0000 2.0000 0.0000 Constraint 98 494 0.8000 1.0000 2.0000 0.0000 Constraint 98 486 0.8000 1.0000 2.0000 0.0000 Constraint 98 478 0.8000 1.0000 2.0000 0.0000 Constraint 98 471 0.8000 1.0000 2.0000 0.0000 Constraint 98 459 0.8000 1.0000 2.0000 0.0000 Constraint 98 452 0.8000 1.0000 2.0000 0.0000 Constraint 98 447 0.8000 1.0000 2.0000 0.0000 Constraint 98 439 0.8000 1.0000 2.0000 0.0000 Constraint 98 431 0.8000 1.0000 2.0000 0.0000 Constraint 98 422 0.8000 1.0000 2.0000 0.0000 Constraint 98 414 0.8000 1.0000 2.0000 0.0000 Constraint 98 402 0.8000 1.0000 2.0000 0.0000 Constraint 98 393 0.8000 1.0000 2.0000 0.0000 Constraint 98 385 0.8000 1.0000 2.0000 0.0000 Constraint 98 374 0.8000 1.0000 2.0000 0.0000 Constraint 98 362 0.8000 1.0000 2.0000 0.0000 Constraint 98 295 0.8000 1.0000 2.0000 0.0000 Constraint 98 273 0.8000 1.0000 2.0000 0.0000 Constraint 98 262 0.8000 1.0000 2.0000 0.0000 Constraint 98 254 0.8000 1.0000 2.0000 0.0000 Constraint 98 244 0.8000 1.0000 2.0000 0.0000 Constraint 98 237 0.8000 1.0000 2.0000 0.0000 Constraint 98 228 0.8000 1.0000 2.0000 0.0000 Constraint 98 220 0.8000 1.0000 2.0000 0.0000 Constraint 98 211 0.8000 1.0000 2.0000 0.0000 Constraint 98 202 0.8000 1.0000 2.0000 0.0000 Constraint 98 194 0.8000 1.0000 2.0000 0.0000 Constraint 98 182 0.8000 1.0000 2.0000 0.0000 Constraint 98 170 0.8000 1.0000 2.0000 0.0000 Constraint 98 161 0.8000 1.0000 2.0000 0.0000 Constraint 98 153 0.8000 1.0000 2.0000 0.0000 Constraint 98 146 0.8000 1.0000 2.0000 0.0000 Constraint 98 138 0.8000 1.0000 2.0000 0.0000 Constraint 98 126 0.8000 1.0000 2.0000 0.0000 Constraint 98 113 0.8000 1.0000 2.0000 0.0000 Constraint 98 106 0.8000 1.0000 2.0000 0.0000 Constraint 89 729 0.8000 1.0000 2.0000 0.0000 Constraint 89 723 0.8000 1.0000 2.0000 0.0000 Constraint 89 716 0.8000 1.0000 2.0000 0.0000 Constraint 89 707 0.8000 1.0000 2.0000 0.0000 Constraint 89 692 0.8000 1.0000 2.0000 0.0000 Constraint 89 681 0.8000 1.0000 2.0000 0.0000 Constraint 89 673 0.8000 1.0000 2.0000 0.0000 Constraint 89 665 0.8000 1.0000 2.0000 0.0000 Constraint 89 658 0.8000 1.0000 2.0000 0.0000 Constraint 89 598 0.8000 1.0000 2.0000 0.0000 Constraint 89 572 0.8000 1.0000 2.0000 0.0000 Constraint 89 563 0.8000 1.0000 2.0000 0.0000 Constraint 89 556 0.8000 1.0000 2.0000 0.0000 Constraint 89 551 0.8000 1.0000 2.0000 0.0000 Constraint 89 542 0.8000 1.0000 2.0000 0.0000 Constraint 89 533 0.8000 1.0000 2.0000 0.0000 Constraint 89 525 0.8000 1.0000 2.0000 0.0000 Constraint 89 518 0.8000 1.0000 2.0000 0.0000 Constraint 89 507 0.8000 1.0000 2.0000 0.0000 Constraint 89 494 0.8000 1.0000 2.0000 0.0000 Constraint 89 486 0.8000 1.0000 2.0000 0.0000 Constraint 89 478 0.8000 1.0000 2.0000 0.0000 Constraint 89 471 0.8000 1.0000 2.0000 0.0000 Constraint 89 452 0.8000 1.0000 2.0000 0.0000 Constraint 89 447 0.8000 1.0000 2.0000 0.0000 Constraint 89 439 0.8000 1.0000 2.0000 0.0000 Constraint 89 431 0.8000 1.0000 2.0000 0.0000 Constraint 89 422 0.8000 1.0000 2.0000 0.0000 Constraint 89 414 0.8000 1.0000 2.0000 0.0000 Constraint 89 402 0.8000 1.0000 2.0000 0.0000 Constraint 89 393 0.8000 1.0000 2.0000 0.0000 Constraint 89 343 0.8000 1.0000 2.0000 0.0000 Constraint 89 319 0.8000 1.0000 2.0000 0.0000 Constraint 89 303 0.8000 1.0000 2.0000 0.0000 Constraint 89 295 0.8000 1.0000 2.0000 0.0000 Constraint 89 289 0.8000 1.0000 2.0000 0.0000 Constraint 89 280 0.8000 1.0000 2.0000 0.0000 Constraint 89 273 0.8000 1.0000 2.0000 0.0000 Constraint 89 262 0.8000 1.0000 2.0000 0.0000 Constraint 89 254 0.8000 1.0000 2.0000 0.0000 Constraint 89 244 0.8000 1.0000 2.0000 0.0000 Constraint 89 237 0.8000 1.0000 2.0000 0.0000 Constraint 89 228 0.8000 1.0000 2.0000 0.0000 Constraint 89 220 0.8000 1.0000 2.0000 0.0000 Constraint 89 211 0.8000 1.0000 2.0000 0.0000 Constraint 89 202 0.8000 1.0000 2.0000 0.0000 Constraint 89 194 0.8000 1.0000 2.0000 0.0000 Constraint 89 182 0.8000 1.0000 2.0000 0.0000 Constraint 89 170 0.8000 1.0000 2.0000 0.0000 Constraint 89 161 0.8000 1.0000 2.0000 0.0000 Constraint 89 153 0.8000 1.0000 2.0000 0.0000 Constraint 89 146 0.8000 1.0000 2.0000 0.0000 Constraint 89 138 0.8000 1.0000 2.0000 0.0000 Constraint 89 126 0.8000 1.0000 2.0000 0.0000 Constraint 89 113 0.8000 1.0000 2.0000 0.0000 Constraint 89 106 0.8000 1.0000 2.0000 0.0000 Constraint 89 98 0.8000 1.0000 2.0000 0.0000 Constraint 82 729 0.8000 1.0000 2.0000 0.0000 Constraint 82 723 0.8000 1.0000 2.0000 0.0000 Constraint 82 716 0.8000 1.0000 2.0000 0.0000 Constraint 82 707 0.8000 1.0000 2.0000 0.0000 Constraint 82 692 0.8000 1.0000 2.0000 0.0000 Constraint 82 681 0.8000 1.0000 2.0000 0.0000 Constraint 82 673 0.8000 1.0000 2.0000 0.0000 Constraint 82 665 0.8000 1.0000 2.0000 0.0000 Constraint 82 658 0.8000 1.0000 2.0000 0.0000 Constraint 82 598 0.8000 1.0000 2.0000 0.0000 Constraint 82 587 0.8000 1.0000 2.0000 0.0000 Constraint 82 572 0.8000 1.0000 2.0000 0.0000 Constraint 82 563 0.8000 1.0000 2.0000 0.0000 Constraint 82 556 0.8000 1.0000 2.0000 0.0000 Constraint 82 551 0.8000 1.0000 2.0000 0.0000 Constraint 82 542 0.8000 1.0000 2.0000 0.0000 Constraint 82 533 0.8000 1.0000 2.0000 0.0000 Constraint 82 525 0.8000 1.0000 2.0000 0.0000 Constraint 82 518 0.8000 1.0000 2.0000 0.0000 Constraint 82 507 0.8000 1.0000 2.0000 0.0000 Constraint 82 494 0.8000 1.0000 2.0000 0.0000 Constraint 82 486 0.8000 1.0000 2.0000 0.0000 Constraint 82 478 0.8000 1.0000 2.0000 0.0000 Constraint 82 471 0.8000 1.0000 2.0000 0.0000 Constraint 82 459 0.8000 1.0000 2.0000 0.0000 Constraint 82 452 0.8000 1.0000 2.0000 0.0000 Constraint 82 447 0.8000 1.0000 2.0000 0.0000 Constraint 82 439 0.8000 1.0000 2.0000 0.0000 Constraint 82 431 0.8000 1.0000 2.0000 0.0000 Constraint 82 422 0.8000 1.0000 2.0000 0.0000 Constraint 82 414 0.8000 1.0000 2.0000 0.0000 Constraint 82 402 0.8000 1.0000 2.0000 0.0000 Constraint 82 393 0.8000 1.0000 2.0000 0.0000 Constraint 82 319 0.8000 1.0000 2.0000 0.0000 Constraint 82 310 0.8000 1.0000 2.0000 0.0000 Constraint 82 303 0.8000 1.0000 2.0000 0.0000 Constraint 82 295 0.8000 1.0000 2.0000 0.0000 Constraint 82 289 0.8000 1.0000 2.0000 0.0000 Constraint 82 280 0.8000 1.0000 2.0000 0.0000 Constraint 82 273 0.8000 1.0000 2.0000 0.0000 Constraint 82 262 0.8000 1.0000 2.0000 0.0000 Constraint 82 254 0.8000 1.0000 2.0000 0.0000 Constraint 82 244 0.8000 1.0000 2.0000 0.0000 Constraint 82 237 0.8000 1.0000 2.0000 0.0000 Constraint 82 228 0.8000 1.0000 2.0000 0.0000 Constraint 82 220 0.8000 1.0000 2.0000 0.0000 Constraint 82 211 0.8000 1.0000 2.0000 0.0000 Constraint 82 202 0.8000 1.0000 2.0000 0.0000 Constraint 82 194 0.8000 1.0000 2.0000 0.0000 Constraint 82 182 0.8000 1.0000 2.0000 0.0000 Constraint 82 170 0.8000 1.0000 2.0000 0.0000 Constraint 82 161 0.8000 1.0000 2.0000 0.0000 Constraint 82 153 0.8000 1.0000 2.0000 0.0000 Constraint 82 146 0.8000 1.0000 2.0000 0.0000 Constraint 82 138 0.8000 1.0000 2.0000 0.0000 Constraint 82 126 0.8000 1.0000 2.0000 0.0000 Constraint 82 113 0.8000 1.0000 2.0000 0.0000 Constraint 82 106 0.8000 1.0000 2.0000 0.0000 Constraint 82 98 0.8000 1.0000 2.0000 0.0000 Constraint 82 89 0.8000 1.0000 2.0000 0.0000 Constraint 74 729 0.8000 1.0000 2.0000 0.0000 Constraint 74 723 0.8000 1.0000 2.0000 0.0000 Constraint 74 716 0.8000 1.0000 2.0000 0.0000 Constraint 74 707 0.8000 1.0000 2.0000 0.0000 Constraint 74 692 0.8000 1.0000 2.0000 0.0000 Constraint 74 681 0.8000 1.0000 2.0000 0.0000 Constraint 74 673 0.8000 1.0000 2.0000 0.0000 Constraint 74 598 0.8000 1.0000 2.0000 0.0000 Constraint 74 556 0.8000 1.0000 2.0000 0.0000 Constraint 74 551 0.8000 1.0000 2.0000 0.0000 Constraint 74 542 0.8000 1.0000 2.0000 0.0000 Constraint 74 525 0.8000 1.0000 2.0000 0.0000 Constraint 74 518 0.8000 1.0000 2.0000 0.0000 Constraint 74 507 0.8000 1.0000 2.0000 0.0000 Constraint 74 494 0.8000 1.0000 2.0000 0.0000 Constraint 74 486 0.8000 1.0000 2.0000 0.0000 Constraint 74 478 0.8000 1.0000 2.0000 0.0000 Constraint 74 471 0.8000 1.0000 2.0000 0.0000 Constraint 74 447 0.8000 1.0000 2.0000 0.0000 Constraint 74 439 0.8000 1.0000 2.0000 0.0000 Constraint 74 431 0.8000 1.0000 2.0000 0.0000 Constraint 74 422 0.8000 1.0000 2.0000 0.0000 Constraint 74 414 0.8000 1.0000 2.0000 0.0000 Constraint 74 402 0.8000 1.0000 2.0000 0.0000 Constraint 74 393 0.8000 1.0000 2.0000 0.0000 Constraint 74 343 0.8000 1.0000 2.0000 0.0000 Constraint 74 319 0.8000 1.0000 2.0000 0.0000 Constraint 74 303 0.8000 1.0000 2.0000 0.0000 Constraint 74 295 0.8000 1.0000 2.0000 0.0000 Constraint 74 289 0.8000 1.0000 2.0000 0.0000 Constraint 74 280 0.8000 1.0000 2.0000 0.0000 Constraint 74 273 0.8000 1.0000 2.0000 0.0000 Constraint 74 262 0.8000 1.0000 2.0000 0.0000 Constraint 74 254 0.8000 1.0000 2.0000 0.0000 Constraint 74 244 0.8000 1.0000 2.0000 0.0000 Constraint 74 237 0.8000 1.0000 2.0000 0.0000 Constraint 74 228 0.8000 1.0000 2.0000 0.0000 Constraint 74 220 0.8000 1.0000 2.0000 0.0000 Constraint 74 211 0.8000 1.0000 2.0000 0.0000 Constraint 74 202 0.8000 1.0000 2.0000 0.0000 Constraint 74 194 0.8000 1.0000 2.0000 0.0000 Constraint 74 182 0.8000 1.0000 2.0000 0.0000 Constraint 74 170 0.8000 1.0000 2.0000 0.0000 Constraint 74 161 0.8000 1.0000 2.0000 0.0000 Constraint 74 153 0.8000 1.0000 2.0000 0.0000 Constraint 74 146 0.8000 1.0000 2.0000 0.0000 Constraint 74 126 0.8000 1.0000 2.0000 0.0000 Constraint 74 113 0.8000 1.0000 2.0000 0.0000 Constraint 74 106 0.8000 1.0000 2.0000 0.0000 Constraint 74 98 0.8000 1.0000 2.0000 0.0000 Constraint 74 89 0.8000 1.0000 2.0000 0.0000 Constraint 74 82 0.8000 1.0000 2.0000 0.0000 Constraint 65 729 0.8000 1.0000 2.0000 0.0000 Constraint 65 723 0.8000 1.0000 2.0000 0.0000 Constraint 65 716 0.8000 1.0000 2.0000 0.0000 Constraint 65 707 0.8000 1.0000 2.0000 0.0000 Constraint 65 692 0.8000 1.0000 2.0000 0.0000 Constraint 65 681 0.8000 1.0000 2.0000 0.0000 Constraint 65 673 0.8000 1.0000 2.0000 0.0000 Constraint 65 608 0.8000 1.0000 2.0000 0.0000 Constraint 65 598 0.8000 1.0000 2.0000 0.0000 Constraint 65 556 0.8000 1.0000 2.0000 0.0000 Constraint 65 551 0.8000 1.0000 2.0000 0.0000 Constraint 65 533 0.8000 1.0000 2.0000 0.0000 Constraint 65 525 0.8000 1.0000 2.0000 0.0000 Constraint 65 518 0.8000 1.0000 2.0000 0.0000 Constraint 65 507 0.8000 1.0000 2.0000 0.0000 Constraint 65 494 0.8000 1.0000 2.0000 0.0000 Constraint 65 486 0.8000 1.0000 2.0000 0.0000 Constraint 65 478 0.8000 1.0000 2.0000 0.0000 Constraint 65 471 0.8000 1.0000 2.0000 0.0000 Constraint 65 447 0.8000 1.0000 2.0000 0.0000 Constraint 65 439 0.8000 1.0000 2.0000 0.0000 Constraint 65 431 0.8000 1.0000 2.0000 0.0000 Constraint 65 422 0.8000 1.0000 2.0000 0.0000 Constraint 65 414 0.8000 1.0000 2.0000 0.0000 Constraint 65 402 0.8000 1.0000 2.0000 0.0000 Constraint 65 393 0.8000 1.0000 2.0000 0.0000 Constraint 65 343 0.8000 1.0000 2.0000 0.0000 Constraint 65 325 0.8000 1.0000 2.0000 0.0000 Constraint 65 319 0.8000 1.0000 2.0000 0.0000 Constraint 65 310 0.8000 1.0000 2.0000 0.0000 Constraint 65 303 0.8000 1.0000 2.0000 0.0000 Constraint 65 295 0.8000 1.0000 2.0000 0.0000 Constraint 65 289 0.8000 1.0000 2.0000 0.0000 Constraint 65 280 0.8000 1.0000 2.0000 0.0000 Constraint 65 273 0.8000 1.0000 2.0000 0.0000 Constraint 65 262 0.8000 1.0000 2.0000 0.0000 Constraint 65 254 0.8000 1.0000 2.0000 0.0000 Constraint 65 244 0.8000 1.0000 2.0000 0.0000 Constraint 65 237 0.8000 1.0000 2.0000 0.0000 Constraint 65 228 0.8000 1.0000 2.0000 0.0000 Constraint 65 220 0.8000 1.0000 2.0000 0.0000 Constraint 65 211 0.8000 1.0000 2.0000 0.0000 Constraint 65 202 0.8000 1.0000 2.0000 0.0000 Constraint 65 194 0.8000 1.0000 2.0000 0.0000 Constraint 65 182 0.8000 1.0000 2.0000 0.0000 Constraint 65 170 0.8000 1.0000 2.0000 0.0000 Constraint 65 161 0.8000 1.0000 2.0000 0.0000 Constraint 65 153 0.8000 1.0000 2.0000 0.0000 Constraint 65 146 0.8000 1.0000 2.0000 0.0000 Constraint 65 126 0.8000 1.0000 2.0000 0.0000 Constraint 65 113 0.8000 1.0000 2.0000 0.0000 Constraint 65 106 0.8000 1.0000 2.0000 0.0000 Constraint 65 98 0.8000 1.0000 2.0000 0.0000 Constraint 65 89 0.8000 1.0000 2.0000 0.0000 Constraint 65 82 0.8000 1.0000 2.0000 0.0000 Constraint 65 74 0.8000 1.0000 2.0000 0.0000 Constraint 58 729 0.8000 1.0000 2.0000 0.0000 Constraint 58 723 0.8000 1.0000 2.0000 0.0000 Constraint 58 716 0.8000 1.0000 2.0000 0.0000 Constraint 58 707 0.8000 1.0000 2.0000 0.0000 Constraint 58 692 0.8000 1.0000 2.0000 0.0000 Constraint 58 579 0.8000 1.0000 2.0000 0.0000 Constraint 58 556 0.8000 1.0000 2.0000 0.0000 Constraint 58 551 0.8000 1.0000 2.0000 0.0000 Constraint 58 542 0.8000 1.0000 2.0000 0.0000 Constraint 58 533 0.8000 1.0000 2.0000 0.0000 Constraint 58 525 0.8000 1.0000 2.0000 0.0000 Constraint 58 518 0.8000 1.0000 2.0000 0.0000 Constraint 58 507 0.8000 1.0000 2.0000 0.0000 Constraint 58 494 0.8000 1.0000 2.0000 0.0000 Constraint 58 486 0.8000 1.0000 2.0000 0.0000 Constraint 58 478 0.8000 1.0000 2.0000 0.0000 Constraint 58 471 0.8000 1.0000 2.0000 0.0000 Constraint 58 459 0.8000 1.0000 2.0000 0.0000 Constraint 58 439 0.8000 1.0000 2.0000 0.0000 Constraint 58 431 0.8000 1.0000 2.0000 0.0000 Constraint 58 422 0.8000 1.0000 2.0000 0.0000 Constraint 58 402 0.8000 1.0000 2.0000 0.0000 Constraint 58 393 0.8000 1.0000 2.0000 0.0000 Constraint 58 343 0.8000 1.0000 2.0000 0.0000 Constraint 58 325 0.8000 1.0000 2.0000 0.0000 Constraint 58 319 0.8000 1.0000 2.0000 0.0000 Constraint 58 310 0.8000 1.0000 2.0000 0.0000 Constraint 58 303 0.8000 1.0000 2.0000 0.0000 Constraint 58 295 0.8000 1.0000 2.0000 0.0000 Constraint 58 289 0.8000 1.0000 2.0000 0.0000 Constraint 58 280 0.8000 1.0000 2.0000 0.0000 Constraint 58 273 0.8000 1.0000 2.0000 0.0000 Constraint 58 262 0.8000 1.0000 2.0000 0.0000 Constraint 58 254 0.8000 1.0000 2.0000 0.0000 Constraint 58 244 0.8000 1.0000 2.0000 0.0000 Constraint 58 237 0.8000 1.0000 2.0000 0.0000 Constraint 58 228 0.8000 1.0000 2.0000 0.0000 Constraint 58 220 0.8000 1.0000 2.0000 0.0000 Constraint 58 211 0.8000 1.0000 2.0000 0.0000 Constraint 58 202 0.8000 1.0000 2.0000 0.0000 Constraint 58 194 0.8000 1.0000 2.0000 0.0000 Constraint 58 182 0.8000 1.0000 2.0000 0.0000 Constraint 58 170 0.8000 1.0000 2.0000 0.0000 Constraint 58 161 0.8000 1.0000 2.0000 0.0000 Constraint 58 153 0.8000 1.0000 2.0000 0.0000 Constraint 58 146 0.8000 1.0000 2.0000 0.0000 Constraint 58 138 0.8000 1.0000 2.0000 0.0000 Constraint 58 113 0.8000 1.0000 2.0000 0.0000 Constraint 58 106 0.8000 1.0000 2.0000 0.0000 Constraint 58 98 0.8000 1.0000 2.0000 0.0000 Constraint 58 89 0.8000 1.0000 2.0000 0.0000 Constraint 58 82 0.8000 1.0000 2.0000 0.0000 Constraint 58 74 0.8000 1.0000 2.0000 0.0000 Constraint 58 65 0.8000 1.0000 2.0000 0.0000 Constraint 50 729 0.8000 1.0000 2.0000 0.0000 Constraint 50 723 0.8000 1.0000 2.0000 0.0000 Constraint 50 716 0.8000 1.0000 2.0000 0.0000 Constraint 50 707 0.8000 1.0000 2.0000 0.0000 Constraint 50 692 0.8000 1.0000 2.0000 0.0000 Constraint 50 619 0.8000 1.0000 2.0000 0.0000 Constraint 50 608 0.8000 1.0000 2.0000 0.0000 Constraint 50 598 0.8000 1.0000 2.0000 0.0000 Constraint 50 587 0.8000 1.0000 2.0000 0.0000 Constraint 50 579 0.8000 1.0000 2.0000 0.0000 Constraint 50 572 0.8000 1.0000 2.0000 0.0000 Constraint 50 563 0.8000 1.0000 2.0000 0.0000 Constraint 50 556 0.8000 1.0000 2.0000 0.0000 Constraint 50 551 0.8000 1.0000 2.0000 0.0000 Constraint 50 542 0.8000 1.0000 2.0000 0.0000 Constraint 50 533 0.8000 1.0000 2.0000 0.0000 Constraint 50 525 0.8000 1.0000 2.0000 0.0000 Constraint 50 518 0.8000 1.0000 2.0000 0.0000 Constraint 50 507 0.8000 1.0000 2.0000 0.0000 Constraint 50 494 0.8000 1.0000 2.0000 0.0000 Constraint 50 486 0.8000 1.0000 2.0000 0.0000 Constraint 50 478 0.8000 1.0000 2.0000 0.0000 Constraint 50 471 0.8000 1.0000 2.0000 0.0000 Constraint 50 459 0.8000 1.0000 2.0000 0.0000 Constraint 50 422 0.8000 1.0000 2.0000 0.0000 Constraint 50 414 0.8000 1.0000 2.0000 0.0000 Constraint 50 402 0.8000 1.0000 2.0000 0.0000 Constraint 50 393 0.8000 1.0000 2.0000 0.0000 Constraint 50 352 0.8000 1.0000 2.0000 0.0000 Constraint 50 343 0.8000 1.0000 2.0000 0.0000 Constraint 50 331 0.8000 1.0000 2.0000 0.0000 Constraint 50 325 0.8000 1.0000 2.0000 0.0000 Constraint 50 319 0.8000 1.0000 2.0000 0.0000 Constraint 50 310 0.8000 1.0000 2.0000 0.0000 Constraint 50 303 0.8000 1.0000 2.0000 0.0000 Constraint 50 295 0.8000 1.0000 2.0000 0.0000 Constraint 50 289 0.8000 1.0000 2.0000 0.0000 Constraint 50 280 0.8000 1.0000 2.0000 0.0000 Constraint 50 273 0.8000 1.0000 2.0000 0.0000 Constraint 50 262 0.8000 1.0000 2.0000 0.0000 Constraint 50 254 0.8000 1.0000 2.0000 0.0000 Constraint 50 244 0.8000 1.0000 2.0000 0.0000 Constraint 50 237 0.8000 1.0000 2.0000 0.0000 Constraint 50 228 0.8000 1.0000 2.0000 0.0000 Constraint 50 220 0.8000 1.0000 2.0000 0.0000 Constraint 50 211 0.8000 1.0000 2.0000 0.0000 Constraint 50 202 0.8000 1.0000 2.0000 0.0000 Constraint 50 194 0.8000 1.0000 2.0000 0.0000 Constraint 50 182 0.8000 1.0000 2.0000 0.0000 Constraint 50 170 0.8000 1.0000 2.0000 0.0000 Constraint 50 161 0.8000 1.0000 2.0000 0.0000 Constraint 50 153 0.8000 1.0000 2.0000 0.0000 Constraint 50 146 0.8000 1.0000 2.0000 0.0000 Constraint 50 138 0.8000 1.0000 2.0000 0.0000 Constraint 50 126 0.8000 1.0000 2.0000 0.0000 Constraint 50 113 0.8000 1.0000 2.0000 0.0000 Constraint 50 106 0.8000 1.0000 2.0000 0.0000 Constraint 50 98 0.8000 1.0000 2.0000 0.0000 Constraint 50 89 0.8000 1.0000 2.0000 0.0000 Constraint 50 82 0.8000 1.0000 2.0000 0.0000 Constraint 50 74 0.8000 1.0000 2.0000 0.0000 Constraint 50 65 0.8000 1.0000 2.0000 0.0000 Constraint 50 58 0.8000 1.0000 2.0000 0.0000 Constraint 39 729 0.8000 1.0000 2.0000 0.0000 Constraint 39 716 0.8000 1.0000 2.0000 0.0000 Constraint 39 707 0.8000 1.0000 2.0000 0.0000 Constraint 39 628 0.8000 1.0000 2.0000 0.0000 Constraint 39 619 0.8000 1.0000 2.0000 0.0000 Constraint 39 608 0.8000 1.0000 2.0000 0.0000 Constraint 39 598 0.8000 1.0000 2.0000 0.0000 Constraint 39 587 0.8000 1.0000 2.0000 0.0000 Constraint 39 579 0.8000 1.0000 2.0000 0.0000 Constraint 39 572 0.8000 1.0000 2.0000 0.0000 Constraint 39 556 0.8000 1.0000 2.0000 0.0000 Constraint 39 551 0.8000 1.0000 2.0000 0.0000 Constraint 39 542 0.8000 1.0000 2.0000 0.0000 Constraint 39 525 0.8000 1.0000 2.0000 0.0000 Constraint 39 518 0.8000 1.0000 2.0000 0.0000 Constraint 39 507 0.8000 1.0000 2.0000 0.0000 Constraint 39 494 0.8000 1.0000 2.0000 0.0000 Constraint 39 486 0.8000 1.0000 2.0000 0.0000 Constraint 39 478 0.8000 1.0000 2.0000 0.0000 Constraint 39 471 0.8000 1.0000 2.0000 0.0000 Constraint 39 459 0.8000 1.0000 2.0000 0.0000 Constraint 39 452 0.8000 1.0000 2.0000 0.0000 Constraint 39 431 0.8000 1.0000 2.0000 0.0000 Constraint 39 422 0.8000 1.0000 2.0000 0.0000 Constraint 39 402 0.8000 1.0000 2.0000 0.0000 Constraint 39 352 0.8000 1.0000 2.0000 0.0000 Constraint 39 343 0.8000 1.0000 2.0000 0.0000 Constraint 39 336 0.8000 1.0000 2.0000 0.0000 Constraint 39 331 0.8000 1.0000 2.0000 0.0000 Constraint 39 325 0.8000 1.0000 2.0000 0.0000 Constraint 39 319 0.8000 1.0000 2.0000 0.0000 Constraint 39 310 0.8000 1.0000 2.0000 0.0000 Constraint 39 303 0.8000 1.0000 2.0000 0.0000 Constraint 39 295 0.8000 1.0000 2.0000 0.0000 Constraint 39 289 0.8000 1.0000 2.0000 0.0000 Constraint 39 280 0.8000 1.0000 2.0000 0.0000 Constraint 39 273 0.8000 1.0000 2.0000 0.0000 Constraint 39 262 0.8000 1.0000 2.0000 0.0000 Constraint 39 254 0.8000 1.0000 2.0000 0.0000 Constraint 39 244 0.8000 1.0000 2.0000 0.0000 Constraint 39 237 0.8000 1.0000 2.0000 0.0000 Constraint 39 228 0.8000 1.0000 2.0000 0.0000 Constraint 39 220 0.8000 1.0000 2.0000 0.0000 Constraint 39 211 0.8000 1.0000 2.0000 0.0000 Constraint 39 202 0.8000 1.0000 2.0000 0.0000 Constraint 39 194 0.8000 1.0000 2.0000 0.0000 Constraint 39 182 0.8000 1.0000 2.0000 0.0000 Constraint 39 170 0.8000 1.0000 2.0000 0.0000 Constraint 39 161 0.8000 1.0000 2.0000 0.0000 Constraint 39 153 0.8000 1.0000 2.0000 0.0000 Constraint 39 146 0.8000 1.0000 2.0000 0.0000 Constraint 39 138 0.8000 1.0000 2.0000 0.0000 Constraint 39 126 0.8000 1.0000 2.0000 0.0000 Constraint 39 113 0.8000 1.0000 2.0000 0.0000 Constraint 39 106 0.8000 1.0000 2.0000 0.0000 Constraint 39 98 0.8000 1.0000 2.0000 0.0000 Constraint 39 89 0.8000 1.0000 2.0000 0.0000 Constraint 39 82 0.8000 1.0000 2.0000 0.0000 Constraint 39 74 0.8000 1.0000 2.0000 0.0000 Constraint 39 65 0.8000 1.0000 2.0000 0.0000 Constraint 39 58 0.8000 1.0000 2.0000 0.0000 Constraint 39 50 0.8000 1.0000 2.0000 0.0000 Constraint 32 729 0.8000 1.0000 2.0000 0.0000 Constraint 32 723 0.8000 1.0000 2.0000 0.0000 Constraint 32 635 0.8000 1.0000 2.0000 0.0000 Constraint 32 628 0.8000 1.0000 2.0000 0.0000 Constraint 32 619 0.8000 1.0000 2.0000 0.0000 Constraint 32 608 0.8000 1.0000 2.0000 0.0000 Constraint 32 598 0.8000 1.0000 2.0000 0.0000 Constraint 32 587 0.8000 1.0000 2.0000 0.0000 Constraint 32 579 0.8000 1.0000 2.0000 0.0000 Constraint 32 572 0.8000 1.0000 2.0000 0.0000 Constraint 32 556 0.8000 1.0000 2.0000 0.0000 Constraint 32 551 0.8000 1.0000 2.0000 0.0000 Constraint 32 542 0.8000 1.0000 2.0000 0.0000 Constraint 32 525 0.8000 1.0000 2.0000 0.0000 Constraint 32 518 0.8000 1.0000 2.0000 0.0000 Constraint 32 507 0.8000 1.0000 2.0000 0.0000 Constraint 32 494 0.8000 1.0000 2.0000 0.0000 Constraint 32 486 0.8000 1.0000 2.0000 0.0000 Constraint 32 478 0.8000 1.0000 2.0000 0.0000 Constraint 32 471 0.8000 1.0000 2.0000 0.0000 Constraint 32 459 0.8000 1.0000 2.0000 0.0000 Constraint 32 452 0.8000 1.0000 2.0000 0.0000 Constraint 32 431 0.8000 1.0000 2.0000 0.0000 Constraint 32 422 0.8000 1.0000 2.0000 0.0000 Constraint 32 402 0.8000 1.0000 2.0000 0.0000 Constraint 32 362 0.8000 1.0000 2.0000 0.0000 Constraint 32 352 0.8000 1.0000 2.0000 0.0000 Constraint 32 343 0.8000 1.0000 2.0000 0.0000 Constraint 32 336 0.8000 1.0000 2.0000 0.0000 Constraint 32 331 0.8000 1.0000 2.0000 0.0000 Constraint 32 325 0.8000 1.0000 2.0000 0.0000 Constraint 32 319 0.8000 1.0000 2.0000 0.0000 Constraint 32 310 0.8000 1.0000 2.0000 0.0000 Constraint 32 303 0.8000 1.0000 2.0000 0.0000 Constraint 32 295 0.8000 1.0000 2.0000 0.0000 Constraint 32 289 0.8000 1.0000 2.0000 0.0000 Constraint 32 280 0.8000 1.0000 2.0000 0.0000 Constraint 32 273 0.8000 1.0000 2.0000 0.0000 Constraint 32 262 0.8000 1.0000 2.0000 0.0000 Constraint 32 254 0.8000 1.0000 2.0000 0.0000 Constraint 32 244 0.8000 1.0000 2.0000 0.0000 Constraint 32 237 0.8000 1.0000 2.0000 0.0000 Constraint 32 228 0.8000 1.0000 2.0000 0.0000 Constraint 32 220 0.8000 1.0000 2.0000 0.0000 Constraint 32 211 0.8000 1.0000 2.0000 0.0000 Constraint 32 202 0.8000 1.0000 2.0000 0.0000 Constraint 32 194 0.8000 1.0000 2.0000 0.0000 Constraint 32 182 0.8000 1.0000 2.0000 0.0000 Constraint 32 170 0.8000 1.0000 2.0000 0.0000 Constraint 32 161 0.8000 1.0000 2.0000 0.0000 Constraint 32 153 0.8000 1.0000 2.0000 0.0000 Constraint 32 146 0.8000 1.0000 2.0000 0.0000 Constraint 32 138 0.8000 1.0000 2.0000 0.0000 Constraint 32 126 0.8000 1.0000 2.0000 0.0000 Constraint 32 113 0.8000 1.0000 2.0000 0.0000 Constraint 32 98 0.8000 1.0000 2.0000 0.0000 Constraint 32 89 0.8000 1.0000 2.0000 0.0000 Constraint 32 82 0.8000 1.0000 2.0000 0.0000 Constraint 32 74 0.8000 1.0000 2.0000 0.0000 Constraint 32 65 0.8000 1.0000 2.0000 0.0000 Constraint 32 58 0.8000 1.0000 2.0000 0.0000 Constraint 32 50 0.8000 1.0000 2.0000 0.0000 Constraint 32 39 0.8000 1.0000 2.0000 0.0000 Constraint 23 650 0.8000 1.0000 2.0000 0.0000 Constraint 23 642 0.8000 1.0000 2.0000 0.0000 Constraint 23 635 0.8000 1.0000 2.0000 0.0000 Constraint 23 628 0.8000 1.0000 2.0000 0.0000 Constraint 23 619 0.8000 1.0000 2.0000 0.0000 Constraint 23 608 0.8000 1.0000 2.0000 0.0000 Constraint 23 598 0.8000 1.0000 2.0000 0.0000 Constraint 23 587 0.8000 1.0000 2.0000 0.0000 Constraint 23 579 0.8000 1.0000 2.0000 0.0000 Constraint 23 572 0.8000 1.0000 2.0000 0.0000 Constraint 23 556 0.8000 1.0000 2.0000 0.0000 Constraint 23 551 0.8000 1.0000 2.0000 0.0000 Constraint 23 542 0.8000 1.0000 2.0000 0.0000 Constraint 23 533 0.8000 1.0000 2.0000 0.0000 Constraint 23 525 0.8000 1.0000 2.0000 0.0000 Constraint 23 518 0.8000 1.0000 2.0000 0.0000 Constraint 23 507 0.8000 1.0000 2.0000 0.0000 Constraint 23 494 0.8000 1.0000 2.0000 0.0000 Constraint 23 486 0.8000 1.0000 2.0000 0.0000 Constraint 23 478 0.8000 1.0000 2.0000 0.0000 Constraint 23 471 0.8000 1.0000 2.0000 0.0000 Constraint 23 459 0.8000 1.0000 2.0000 0.0000 Constraint 23 452 0.8000 1.0000 2.0000 0.0000 Constraint 23 431 0.8000 1.0000 2.0000 0.0000 Constraint 23 422 0.8000 1.0000 2.0000 0.0000 Constraint 23 414 0.8000 1.0000 2.0000 0.0000 Constraint 23 402 0.8000 1.0000 2.0000 0.0000 Constraint 23 393 0.8000 1.0000 2.0000 0.0000 Constraint 23 385 0.8000 1.0000 2.0000 0.0000 Constraint 23 362 0.8000 1.0000 2.0000 0.0000 Constraint 23 352 0.8000 1.0000 2.0000 0.0000 Constraint 23 343 0.8000 1.0000 2.0000 0.0000 Constraint 23 336 0.8000 1.0000 2.0000 0.0000 Constraint 23 331 0.8000 1.0000 2.0000 0.0000 Constraint 23 325 0.8000 1.0000 2.0000 0.0000 Constraint 23 319 0.8000 1.0000 2.0000 0.0000 Constraint 23 310 0.8000 1.0000 2.0000 0.0000 Constraint 23 303 0.8000 1.0000 2.0000 0.0000 Constraint 23 295 0.8000 1.0000 2.0000 0.0000 Constraint 23 289 0.8000 1.0000 2.0000 0.0000 Constraint 23 280 0.8000 1.0000 2.0000 0.0000 Constraint 23 273 0.8000 1.0000 2.0000 0.0000 Constraint 23 262 0.8000 1.0000 2.0000 0.0000 Constraint 23 254 0.8000 1.0000 2.0000 0.0000 Constraint 23 244 0.8000 1.0000 2.0000 0.0000 Constraint 23 237 0.8000 1.0000 2.0000 0.0000 Constraint 23 228 0.8000 1.0000 2.0000 0.0000 Constraint 23 220 0.8000 1.0000 2.0000 0.0000 Constraint 23 211 0.8000 1.0000 2.0000 0.0000 Constraint 23 202 0.8000 1.0000 2.0000 0.0000 Constraint 23 194 0.8000 1.0000 2.0000 0.0000 Constraint 23 182 0.8000 1.0000 2.0000 0.0000 Constraint 23 170 0.8000 1.0000 2.0000 0.0000 Constraint 23 161 0.8000 1.0000 2.0000 0.0000 Constraint 23 153 0.8000 1.0000 2.0000 0.0000 Constraint 23 146 0.8000 1.0000 2.0000 0.0000 Constraint 23 138 0.8000 1.0000 2.0000 0.0000 Constraint 23 126 0.8000 1.0000 2.0000 0.0000 Constraint 23 113 0.8000 1.0000 2.0000 0.0000 Constraint 23 106 0.8000 1.0000 2.0000 0.0000 Constraint 23 89 0.8000 1.0000 2.0000 0.0000 Constraint 23 82 0.8000 1.0000 2.0000 0.0000 Constraint 23 74 0.8000 1.0000 2.0000 0.0000 Constraint 23 65 0.8000 1.0000 2.0000 0.0000 Constraint 23 58 0.8000 1.0000 2.0000 0.0000 Constraint 23 50 0.8000 1.0000 2.0000 0.0000 Constraint 23 39 0.8000 1.0000 2.0000 0.0000 Constraint 23 32 0.8000 1.0000 2.0000 0.0000 Constraint 17 729 0.8000 1.0000 2.0000 0.0000 Constraint 17 723 0.8000 1.0000 2.0000 0.0000 Constraint 17 650 0.8000 1.0000 2.0000 0.0000 Constraint 17 642 0.8000 1.0000 2.0000 0.0000 Constraint 17 635 0.8000 1.0000 2.0000 0.0000 Constraint 17 628 0.8000 1.0000 2.0000 0.0000 Constraint 17 619 0.8000 1.0000 2.0000 0.0000 Constraint 17 608 0.8000 1.0000 2.0000 0.0000 Constraint 17 598 0.8000 1.0000 2.0000 0.0000 Constraint 17 587 0.8000 1.0000 2.0000 0.0000 Constraint 17 579 0.8000 1.0000 2.0000 0.0000 Constraint 17 572 0.8000 1.0000 2.0000 0.0000 Constraint 17 563 0.8000 1.0000 2.0000 0.0000 Constraint 17 556 0.8000 1.0000 2.0000 0.0000 Constraint 17 551 0.8000 1.0000 2.0000 0.0000 Constraint 17 542 0.8000 1.0000 2.0000 0.0000 Constraint 17 533 0.8000 1.0000 2.0000 0.0000 Constraint 17 525 0.8000 1.0000 2.0000 0.0000 Constraint 17 518 0.8000 1.0000 2.0000 0.0000 Constraint 17 507 0.8000 1.0000 2.0000 0.0000 Constraint 17 494 0.8000 1.0000 2.0000 0.0000 Constraint 17 486 0.8000 1.0000 2.0000 0.0000 Constraint 17 478 0.8000 1.0000 2.0000 0.0000 Constraint 17 471 0.8000 1.0000 2.0000 0.0000 Constraint 17 459 0.8000 1.0000 2.0000 0.0000 Constraint 17 452 0.8000 1.0000 2.0000 0.0000 Constraint 17 447 0.8000 1.0000 2.0000 0.0000 Constraint 17 431 0.8000 1.0000 2.0000 0.0000 Constraint 17 414 0.8000 1.0000 2.0000 0.0000 Constraint 17 402 0.8000 1.0000 2.0000 0.0000 Constraint 17 393 0.8000 1.0000 2.0000 0.0000 Constraint 17 385 0.8000 1.0000 2.0000 0.0000 Constraint 17 362 0.8000 1.0000 2.0000 0.0000 Constraint 17 352 0.8000 1.0000 2.0000 0.0000 Constraint 17 343 0.8000 1.0000 2.0000 0.0000 Constraint 17 336 0.8000 1.0000 2.0000 0.0000 Constraint 17 331 0.8000 1.0000 2.0000 0.0000 Constraint 17 325 0.8000 1.0000 2.0000 0.0000 Constraint 17 319 0.8000 1.0000 2.0000 0.0000 Constraint 17 310 0.8000 1.0000 2.0000 0.0000 Constraint 17 303 0.8000 1.0000 2.0000 0.0000 Constraint 17 295 0.8000 1.0000 2.0000 0.0000 Constraint 17 289 0.8000 1.0000 2.0000 0.0000 Constraint 17 280 0.8000 1.0000 2.0000 0.0000 Constraint 17 273 0.8000 1.0000 2.0000 0.0000 Constraint 17 262 0.8000 1.0000 2.0000 0.0000 Constraint 17 254 0.8000 1.0000 2.0000 0.0000 Constraint 17 244 0.8000 1.0000 2.0000 0.0000 Constraint 17 228 0.8000 1.0000 2.0000 0.0000 Constraint 17 220 0.8000 1.0000 2.0000 0.0000 Constraint 17 202 0.8000 1.0000 2.0000 0.0000 Constraint 17 194 0.8000 1.0000 2.0000 0.0000 Constraint 17 182 0.8000 1.0000 2.0000 0.0000 Constraint 17 170 0.8000 1.0000 2.0000 0.0000 Constraint 17 161 0.8000 1.0000 2.0000 0.0000 Constraint 17 153 0.8000 1.0000 2.0000 0.0000 Constraint 17 146 0.8000 1.0000 2.0000 0.0000 Constraint 17 138 0.8000 1.0000 2.0000 0.0000 Constraint 17 126 0.8000 1.0000 2.0000 0.0000 Constraint 17 113 0.8000 1.0000 2.0000 0.0000 Constraint 17 106 0.8000 1.0000 2.0000 0.0000 Constraint 17 98 0.8000 1.0000 2.0000 0.0000 Constraint 17 89 0.8000 1.0000 2.0000 0.0000 Constraint 17 82 0.8000 1.0000 2.0000 0.0000 Constraint 17 74 0.8000 1.0000 2.0000 0.0000 Constraint 17 65 0.8000 1.0000 2.0000 0.0000 Constraint 17 58 0.8000 1.0000 2.0000 0.0000 Constraint 17 50 0.8000 1.0000 2.0000 0.0000 Constraint 17 39 0.8000 1.0000 2.0000 0.0000 Constraint 17 32 0.8000 1.0000 2.0000 0.0000 Constraint 17 23 0.8000 1.0000 2.0000 0.0000 Constraint 9 665 0.8000 1.0000 2.0000 0.0000 Constraint 9 658 0.8000 1.0000 2.0000 0.0000 Constraint 9 650 0.8000 1.0000 2.0000 0.0000 Constraint 9 642 0.8000 1.0000 2.0000 0.0000 Constraint 9 635 0.8000 1.0000 2.0000 0.0000 Constraint 9 628 0.8000 1.0000 2.0000 0.0000 Constraint 9 619 0.8000 1.0000 2.0000 0.0000 Constraint 9 608 0.8000 1.0000 2.0000 0.0000 Constraint 9 598 0.8000 1.0000 2.0000 0.0000 Constraint 9 587 0.8000 1.0000 2.0000 0.0000 Constraint 9 579 0.8000 1.0000 2.0000 0.0000 Constraint 9 572 0.8000 1.0000 2.0000 0.0000 Constraint 9 563 0.8000 1.0000 2.0000 0.0000 Constraint 9 556 0.8000 1.0000 2.0000 0.0000 Constraint 9 551 0.8000 1.0000 2.0000 0.0000 Constraint 9 542 0.8000 1.0000 2.0000 0.0000 Constraint 9 533 0.8000 1.0000 2.0000 0.0000 Constraint 9 525 0.8000 1.0000 2.0000 0.0000 Constraint 9 518 0.8000 1.0000 2.0000 0.0000 Constraint 9 507 0.8000 1.0000 2.0000 0.0000 Constraint 9 494 0.8000 1.0000 2.0000 0.0000 Constraint 9 486 0.8000 1.0000 2.0000 0.0000 Constraint 9 478 0.8000 1.0000 2.0000 0.0000 Constraint 9 471 0.8000 1.0000 2.0000 0.0000 Constraint 9 459 0.8000 1.0000 2.0000 0.0000 Constraint 9 452 0.8000 1.0000 2.0000 0.0000 Constraint 9 447 0.8000 1.0000 2.0000 0.0000 Constraint 9 439 0.8000 1.0000 2.0000 0.0000 Constraint 9 431 0.8000 1.0000 2.0000 0.0000 Constraint 9 414 0.8000 1.0000 2.0000 0.0000 Constraint 9 402 0.8000 1.0000 2.0000 0.0000 Constraint 9 393 0.8000 1.0000 2.0000 0.0000 Constraint 9 385 0.8000 1.0000 2.0000 0.0000 Constraint 9 362 0.8000 1.0000 2.0000 0.0000 Constraint 9 352 0.8000 1.0000 2.0000 0.0000 Constraint 9 343 0.8000 1.0000 2.0000 0.0000 Constraint 9 336 0.8000 1.0000 2.0000 0.0000 Constraint 9 331 0.8000 1.0000 2.0000 0.0000 Constraint 9 325 0.8000 1.0000 2.0000 0.0000 Constraint 9 319 0.8000 1.0000 2.0000 0.0000 Constraint 9 310 0.8000 1.0000 2.0000 0.0000 Constraint 9 303 0.8000 1.0000 2.0000 0.0000 Constraint 9 295 0.8000 1.0000 2.0000 0.0000 Constraint 9 289 0.8000 1.0000 2.0000 0.0000 Constraint 9 280 0.8000 1.0000 2.0000 0.0000 Constraint 9 273 0.8000 1.0000 2.0000 0.0000 Constraint 9 262 0.8000 1.0000 2.0000 0.0000 Constraint 9 254 0.8000 1.0000 2.0000 0.0000 Constraint 9 244 0.8000 1.0000 2.0000 0.0000 Constraint 9 228 0.8000 1.0000 2.0000 0.0000 Constraint 9 220 0.8000 1.0000 2.0000 0.0000 Constraint 9 202 0.8000 1.0000 2.0000 0.0000 Constraint 9 194 0.8000 1.0000 2.0000 0.0000 Constraint 9 182 0.8000 1.0000 2.0000 0.0000 Constraint 9 170 0.8000 1.0000 2.0000 0.0000 Constraint 9 161 0.8000 1.0000 2.0000 0.0000 Constraint 9 153 0.8000 1.0000 2.0000 0.0000 Constraint 9 146 0.8000 1.0000 2.0000 0.0000 Constraint 9 138 0.8000 1.0000 2.0000 0.0000 Constraint 9 126 0.8000 1.0000 2.0000 0.0000 Constraint 9 113 0.8000 1.0000 2.0000 0.0000 Constraint 9 106 0.8000 1.0000 2.0000 0.0000 Constraint 9 98 0.8000 1.0000 2.0000 0.0000 Constraint 9 89 0.8000 1.0000 2.0000 0.0000 Constraint 9 82 0.8000 1.0000 2.0000 0.0000 Constraint 9 74 0.8000 1.0000 2.0000 0.0000 Constraint 9 65 0.8000 1.0000 2.0000 0.0000 Constraint 9 58 0.8000 1.0000 2.0000 0.0000 Constraint 9 50 0.8000 1.0000 2.0000 0.0000 Constraint 9 39 0.8000 1.0000 2.0000 0.0000 Constraint 9 32 0.8000 1.0000 2.0000 0.0000 Constraint 9 23 0.8000 1.0000 2.0000 0.0000 Constraint 9 17 0.8000 1.0000 2.0000 0.0000 Constraint 3 729 0.8000 1.0000 2.0000 0.0000 Constraint 3 673 0.8000 1.0000 2.0000 0.0000 Constraint 3 665 0.8000 1.0000 2.0000 0.0000 Constraint 3 658 0.8000 1.0000 2.0000 0.0000 Constraint 3 650 0.8000 1.0000 2.0000 0.0000 Constraint 3 642 0.8000 1.0000 2.0000 0.0000 Constraint 3 635 0.8000 1.0000 2.0000 0.0000 Constraint 3 628 0.8000 1.0000 2.0000 0.0000 Constraint 3 619 0.8000 1.0000 2.0000 0.0000 Constraint 3 608 0.8000 1.0000 2.0000 0.0000 Constraint 3 598 0.8000 1.0000 2.0000 0.0000 Constraint 3 587 0.8000 1.0000 2.0000 0.0000 Constraint 3 579 0.8000 1.0000 2.0000 0.0000 Constraint 3 572 0.8000 1.0000 2.0000 0.0000 Constraint 3 563 0.8000 1.0000 2.0000 0.0000 Constraint 3 556 0.8000 1.0000 2.0000 0.0000 Constraint 3 551 0.8000 1.0000 2.0000 0.0000 Constraint 3 542 0.8000 1.0000 2.0000 0.0000 Constraint 3 533 0.8000 1.0000 2.0000 0.0000 Constraint 3 525 0.8000 1.0000 2.0000 0.0000 Constraint 3 518 0.8000 1.0000 2.0000 0.0000 Constraint 3 507 0.8000 1.0000 2.0000 0.0000 Constraint 3 494 0.8000 1.0000 2.0000 0.0000 Constraint 3 486 0.8000 1.0000 2.0000 0.0000 Constraint 3 478 0.8000 1.0000 2.0000 0.0000 Constraint 3 471 0.8000 1.0000 2.0000 0.0000 Constraint 3 459 0.8000 1.0000 2.0000 0.0000 Constraint 3 452 0.8000 1.0000 2.0000 0.0000 Constraint 3 447 0.8000 1.0000 2.0000 0.0000 Constraint 3 439 0.8000 1.0000 2.0000 0.0000 Constraint 3 431 0.8000 1.0000 2.0000 0.0000 Constraint 3 422 0.8000 1.0000 2.0000 0.0000 Constraint 3 414 0.8000 1.0000 2.0000 0.0000 Constraint 3 402 0.8000 1.0000 2.0000 0.0000 Constraint 3 385 0.8000 1.0000 2.0000 0.0000 Constraint 3 374 0.8000 1.0000 2.0000 0.0000 Constraint 3 362 0.8000 1.0000 2.0000 0.0000 Constraint 3 352 0.8000 1.0000 2.0000 0.0000 Constraint 3 343 0.8000 1.0000 2.0000 0.0000 Constraint 3 336 0.8000 1.0000 2.0000 0.0000 Constraint 3 331 0.8000 1.0000 2.0000 0.0000 Constraint 3 325 0.8000 1.0000 2.0000 0.0000 Constraint 3 319 0.8000 1.0000 2.0000 0.0000 Constraint 3 310 0.8000 1.0000 2.0000 0.0000 Constraint 3 303 0.8000 1.0000 2.0000 0.0000 Constraint 3 295 0.8000 1.0000 2.0000 0.0000 Constraint 3 289 0.8000 1.0000 2.0000 0.0000 Constraint 3 280 0.8000 1.0000 2.0000 0.0000 Constraint 3 273 0.8000 1.0000 2.0000 0.0000 Constraint 3 262 0.8000 1.0000 2.0000 0.0000 Constraint 3 254 0.8000 1.0000 2.0000 0.0000 Constraint 3 244 0.8000 1.0000 2.0000 0.0000 Constraint 3 237 0.8000 1.0000 2.0000 0.0000 Constraint 3 228 0.8000 1.0000 2.0000 0.0000 Constraint 3 220 0.8000 1.0000 2.0000 0.0000 Constraint 3 211 0.8000 1.0000 2.0000 0.0000 Constraint 3 202 0.8000 1.0000 2.0000 0.0000 Constraint 3 194 0.8000 1.0000 2.0000 0.0000 Constraint 3 182 0.8000 1.0000 2.0000 0.0000 Constraint 3 170 0.8000 1.0000 2.0000 0.0000 Constraint 3 161 0.8000 1.0000 2.0000 0.0000 Constraint 3 153 0.8000 1.0000 2.0000 0.0000 Constraint 3 146 0.8000 1.0000 2.0000 0.0000 Constraint 3 138 0.8000 1.0000 2.0000 0.0000 Constraint 3 126 0.8000 1.0000 2.0000 0.0000 Constraint 3 113 0.8000 1.0000 2.0000 0.0000 Constraint 3 106 0.8000 1.0000 2.0000 0.0000 Constraint 3 98 0.8000 1.0000 2.0000 0.0000 Constraint 3 89 0.8000 1.0000 2.0000 0.0000 Constraint 3 82 0.8000 1.0000 2.0000 0.0000 Constraint 3 74 0.8000 1.0000 2.0000 0.0000 Constraint 3 65 0.8000 1.0000 2.0000 0.0000 Constraint 3 58 0.8000 1.0000 2.0000 0.0000 Constraint 3 50 0.8000 1.0000 2.0000 0.0000 Constraint 3 39 0.8000 1.0000 2.0000 0.0000 Constraint 3 32 0.8000 1.0000 2.0000 0.0000 Constraint 3 23 0.8000 1.0000 2.0000 0.0000 Constraint 3 17 0.8000 1.0000 2.0000 0.0000 Constraint 3 9 0.8000 1.0000 2.0000 0.0000 Done printing distance constraints # command: