# converted from rr file by 'rr2constraints.py' # Mon Oct 15 13:41:20 2007 # parameters: # nonbonus: 0.010000*sequencelen # bonus: 0.750000*sequencelen # Constraint G35.CA I68.CB -10. 7.0 14.0 0.659151 Constraint V9.CB V33.CB -10. 7.0 14.0 0.410484 Constraint M13.CB G35.CA -10. 7.0 14.0 0.383561 Constraint V10.CB V33.CB -10. 7.0 14.0 0.347245 bonus Constraint V11.CB G35.CA -10. 7.0 14.0 0.312219 bonus Constraint G12.CA I36.CB -10. 7.0 14.0 0.261202 bonus Constraint V10.CB I34.CB -10. 7.0 14.0 0.243759 bonus Constraint M13.CB M38.CB -10. 7.0 14.0 0.240638 bonus Constraint R8.CB D32.CB -10. 7.0 14.0 0.235272 bonus Constraint M13.CB F37.CB -10. 7.0 14.0 0.234780 bonus Constraint V11.CB V33.CB -10. 7.0 14.0 0.228648 bonus Constraint V11.CB I36.CB -10. 7.0 14.0 0.227655 bonus Constraint F261.CB L272.CB -10. 7.0 14.0 0.223920 bonus Constraint V9.CB Y31.CB -10. 7.0 14.0 0.221552 bonus Constraint M13.CB T22.CB -10. 7.0 14.0 0.216098 bonus Constraint V9.CB D32.CB -10. 7.0 14.0 0.213255 bonus Constraint G12.CA M38.CB -10. 7.0 14.0 0.211186 bonus Constraint M13.CB I36.CB -10. 7.0 14.0 0.211152 bonus Constraint V263.CB V274.CB -10. 7.0 14.0 0.210243 bonus Constraint V10.CB I36.CB -10. 7.0 14.0 0.209100 bonus Constraint V9.CB I34.CB -10. 7.0 14.0 0.207978 bonus Constraint V322.CB V331.CB -10. 7.0 14.0 0.208792 bonus Constraint I34.CB Y71.CB -10. 7.0 14.0 0.207257 bonus Constraint V263.CB L272.CB -10. 7.0 14.0 0.203978 bonus Constraint I34.CB A121.CB -10. 7.0 14.0 0.201776 bonus Constraint V9.CB G35.CA -10. 7.0 14.0 0.197097 bonus Constraint G264.CA V274.CB -10. 7.0 14.0 0.195684 bonus Constraint V10.CB A121.CB -10. 7.0 14.0 0.193154 bonus Constraint S14.CB G127.CA -10. 7.0 14.0 0.191665 bonus Constraint V33.CB I68.CB -10. 7.0 14.0 0.191012 bonus Constraint F37.CB S72.CB -10. 7.0 14.0 0.191478 bonus Constraint G12.CA V33.CB -10. 7.0 14.0 0.190334 bonus Constraint S14.CB K39.CB -10. 7.0 14.0 0.189587 bonus Constraint M38.CB S72.CB -10. 7.0 14.0 0.189267 bonus Constraint A23.CB V33.CB -10. 7.0 14.0 0.186558 bonus Constraint V11.CB I34.CB -10. 7.0 14.0 0.182206 bonus Constraint V9.CB I68.CB -10. 7.0 14.0 0.180535 bonus Constraint V10.CB Y31.CB -10. 7.0 14.0 0.180097 bonus Constraint M13.CB A23.CB -10. 7.0 14.0 0.179746 bonus Constraint I34.CB I68.CB -10. 7.0 14.0 0.178110 bonus Constraint F261.CB V274.CB -10. 7.0 14.0 0.174823 bonus Constraint M13.CB V33.CB -10. 7.0 14.0 0.173076 bonus Constraint V262.CB L272.CB -10. 7.0 14.0 0.173185 bonus Constraint V9.CB Y123.CB -10. 7.0 14.0 0.171924 bonus Constraint F261.CB Y273.CB -10. 7.0 14.0 0.171643 bonus Constraint V10.CB V124.CB -10. 7.0 14.0 0.169944 bonus Constraint M13.CB L25.CB -10. 7.0 14.0 0.169887 bonus Constraint F37.CB V59.CB -10. 7.0 14.0 0.163113 bonus Constraint V320.CB V331.CB -10. 7.0 14.0 0.163194 bonus Constraint V262.CB V274.CB -10. 7.0 14.0 0.160353 bonus Constraint A23.CB G35.CA -10. 7.0 14.0 0.157958 bonus Constraint I36.CB V124.CB -10. 7.0 14.0 0.156424 bonus Constraint M13.CB T126.CB -10. 7.0 14.0 0.154889 bonus Constraint S14.CB F37.CB -10. 7.0 14.0 0.151914 bonus Constraint S14.CB M38.CB -10. 7.0 14.0 0.152650 bonus Constraint I36.CB S72.CB -10. 7.0 14.0 0.151638 bonus Constraint Y129.CB Q152.CB -10. 7.0 14.0 0.151187 bonus Constraint V10.CB I68.CB -10. 7.0 14.0 0.148044 bonus Constraint G12.CA A125.CB -10. 7.0 14.0 0.148818 bonus Constraint S14.CB N40.CB -10. 7.0 14.0 0.148176 bonus Constraint V9.CB I36.CB -10. 7.0 14.0 0.146803 bonus Constraint V262.CB G275.CA -10. 7.0 14.0 0.146716 bonus Constraint M38.CB A125.CB -10. 7.0 14.0 0.145611 bonus Constraint I36.CB Y70.CB -10. 7.0 14.0 0.141205 bonus Constraint W260.CB L272.CB -10. 7.0 14.0 0.141409 bonus Constraint V9.CB V124.CB -10. 7.0 14.0 0.139366 bonus Constraint V9.CB A121.CB -10. 7.0 14.0 0.137624 bonus Constraint F37.CB Y70.CB -10. 7.0 14.0 0.138197 bonus Constraint G12.CA K39.CB -10. 7.0 14.0 0.136910 bonus Constraint F261.CB G275.CA -10. 7.0 14.0 0.137139 bonus Constraint Y129.CB F169.CB -10. 7.0 14.0 0.135683 bonus Constraint A309.CB V322.CB -10. 7.0 14.0 0.136515 bonus Constraint C307.CB V322.CB -10. 7.0 14.0 0.134833 bonus Constraint V11.CB V124.CB -10. 7.0 14.0 0.132709 bonus Constraint F37.CB A63.CB -10. 7.0 14.0 0.133394 bonus Constraint V11.CB L25.CB -10. 7.0 14.0 0.130543 bonus Constraint G12.CA L26.CB -10. 7.0 14.0 0.129928 bonus Constraint G12.CA F112.CB -10. 7.0 14.0 0.128133 bonus Constraint V10.CB Y70.CB -10. 7.0 14.0 0.125508 bonus Constraint V17.CB D100.CB -10. 7.0 14.0 0.126293 bonus Constraint A23.CB V59.CB -10. 7.0 14.0 0.126523 bonus Constraint Y129.CB T139.CB -10. 7.0 14.0 0.126591 bonus Constraint G264.CA Y273.CB -10. 7.0 14.0 0.126948 bonus Constraint V9.CB Y70.CB -10. 7.0 14.0 0.123295 bonus Constraint V11.CB T22.CB -10. 7.0 14.0 0.123988 bonus Constraint G264.CA G275.CA -10. 7.0 14.0 0.124781 bonus Constraint V11.CB L26.CB -10. 7.0 14.0 0.123729 bonus Constraint D100.CB Y129.CB -10. 7.0 14.0 0.123715 bonus Constraint V11.CB A125.CB -10. 7.0 14.0 0.122089 bonus Constraint G15.CA K39.CB -10. 7.0 14.0 0.121383 bonus Constraint P259.CB V274.CB -10. 7.0 14.0 0.121813 bonus Constraint V263.CB G275.CA -10. 7.0 14.0 0.121610 bonus Constraint V320.CB F333.CB -10. 7.0 14.0 0.121948 bonus Constraint V17.CB Y129.CB -10. 7.0 14.0 0.120154 bonus Constraint M38.CB V59.CB -10. 7.0 14.0 0.119649 bonus Constraint A309.CB V331.CB -10. 7.0 14.0 0.119973 bonus Constraint G16.CA G127.CA -10. 7.0 14.0 0.118205 bonus Constraint K108.CB Y129.CB -10. 7.0 14.0 0.118077 bonus Constraint V262.CB Y273.CB -10. 7.0 14.0 0.116933 bonus Constraint G15.CA N40.CB -10. 7.0 14.0 0.115126 bonus Constraint T22.CB V33.CB -10. 7.0 14.0 0.114575 bonus Constraint P259.CB Y273.CB -10. 7.0 14.0 0.115063 bonus Constraint M38.CB Y70.CB -10. 7.0 14.0 0.113584 bonus Constraint D100.CB H128.CB -10. 7.0 14.0 0.113959 bonus Constraint F112.CB V124.CB -10. 7.0 14.0 0.113710 bonus Constraint I36.CB I68.CB -10. 7.0 14.0 0.112045 bonus Constraint V11.CB M38.CB -10. 7.0 14.0 0.110991 bonus Constraint G15.CA G127.CA -10. 7.0 14.0 0.109587 bonus Constraint L288.CB F333.CB -10. 7.0 14.0 0.109293 bonus Constraint S14.CB I36.CB -10. 7.0 14.0 0.107946 bonus Constraint S14.CB A23.CB -10. 7.0 14.0 0.106668 bonus Constraint V17.CB C50.CB -10. 7.0 14.0 0.107572 bonus Constraint P259.CB G275.CA -10. 7.0 14.0 0.107800 bonus Constraint V11.CB A23.CB -10. 7.0 14.0 0.104293 bonus Constraint V11.CB I68.CB -10. 7.0 14.0 0.103542 bonus Constraint A23.CB V83.CB -10. 7.0 14.0 0.103239 bonus Constraint V17.CB N74.CB -10. 7.0 14.0 0.101426 bonus Constraint V33.CB A121.CB -10. 7.0 14.0 0.101367 bonus Constraint M38.CB V73.CB -10. 7.0 14.0 0.101894 bonus Constraint H128.CB T139.CB -10. 7.0 14.0 0.102593 bonus Constraint Y129.CB V179.CB -10. 7.0 14.0 0.102828 bonus Constraint M38.CB F75.CB -10. 7.0 14.0 0.100562 bonus Constraint V60.CB Y70.CB -10. 7.0 14.0 0.100819 bonus Constraint V10.CB L26.CB -10. 7.0 14.0 0.098842 bonus Constraint P259.CB R312.CB -10. 7.0 14.0 0.099353 bonus Constraint F261.CB A309.CB -10. 7.0 14.0 0.099554 bonus Constraint M13.CB I34.CB -10. 7.0 14.0 0.098525 bonus Constraint A23.CB I68.CB -10. 7.0 14.0 0.097970 bonus Constraint G12.CA V124.CB -10. 7.0 14.0 0.095744 bonus Constraint G16.CA N40.CB -10. 7.0 14.0 0.095231 bonus Constraint I36.CB A125.CB -10. 7.0 14.0 0.095311 bonus Constraint Y129.CB G138.CA -10. 7.0 14.0 0.094839 bonus Constraint M168.CB V179.CB -10. 7.0 14.0 0.095712 bonus Constraint A309.CB V320.CB -10. 7.0 14.0 0.095799 bonus Constraint V322.CB V346.CB -10. 7.0 14.0 0.094859 bonus Constraint G16.CA K39.CB -10. 7.0 14.0 0.093001 bonus Constraint T126.CB F169.CB -10. 7.0 14.0 0.093372 bonus Constraint H128.CB F169.CB -10. 7.0 14.0 0.093113 bonus Constraint L164.CB V179.CB -10. 7.0 14.0 0.093741 bonus Constraint M13.CB A125.CB -10. 7.0 14.0 0.091629 bonus Constraint N40.CB N74.CB -10. 7.0 14.0 0.091977 bonus Constraint L272.CB L288.CB -10. 7.0 14.0 0.092650 bonus Constraint F333.CB A345.CB -10. 7.0 14.0 0.092838 bonus Constraint L288.CB R312.CB -10. 7.0 14.0 0.091422 bonus Constraint T96.CB Y129.CB -10. 7.0 14.0 0.089620 bonus Constraint D18.CB G127.CA -10. 7.0 14.0 0.088156 bonus Constraint F311.CB V322.CB -10. 7.0 14.0 0.089000 bonus Constraint F311.CB V331.CB -10. 7.0 14.0 0.089142 bonus Constraint V9.CB L26.CB -10. 7.0 14.0 0.086806 bonus Constraint G12.CA H128.CB -10. 7.0 14.0 0.087686 bonus Constraint A23.CB V62.CB -10. 7.0 14.0 0.088498 bonus Constraint M13.CB L26.CB -10. 7.0 14.0 0.087157 bonus Constraint I36.CB V59.CB -10. 7.0 14.0 0.087046 bonus Constraint M38.CB T126.CB -10. 7.0 14.0 0.087128 bonus Constraint H128.CB G138.CA -10. 7.0 14.0 0.087430 bonus Constraint V59.CB I68.CB -10. 7.0 14.0 0.086382 bonus Constraint T126.CB D135.CB -10. 7.0 14.0 0.086242 bonus Constraint Y129.CB H141.CB -10. 7.0 14.0 0.086877 bonus Constraint L288.CB A309.CB -10. 7.0 14.0 0.087406 bonus Constraint Y129.CB C200.CB -10. 7.0 14.0 0.086147 bonus Constraint V346.CB I360.CB -10. 7.0 14.0 0.086498 bonus Constraint V347.CB I360.CB -10. 7.0 14.0 0.086573 bonus Constraint G12.CA N40.CB -10. 7.0 14.0 0.085195 bonus Constraint T22.CB G35.CA -10. 7.0 14.0 0.085055 bonus Constraint M38.CB V62.CB -10. 7.0 14.0 0.085313 bonus Constraint Y129.CB Y154.CB -10. 7.0 14.0 0.085610 bonus Constraint V10.CB S72.CB -10. 7.0 14.0 0.081984 bonus Constraint V11.CB Y31.CB -10. 7.0 14.0 0.081891 bonus Constraint V11.CB S72.CB -10. 7.0 14.0 0.082459 bonus Constraint S14.CB T126.CB -10. 7.0 14.0 0.082228 bonus Constraint S14.CB H128.CB -10. 7.0 14.0 0.081957 bonus Constraint S19.CB M38.CB -10. 7.0 14.0 0.082782 bonus Constraint T22.CB M38.CB -10. 7.0 14.0 0.083576 bonus Constraint A63.CB V83.CB -10. 7.0 14.0 0.084455 bonus Constraint C103.CB Y129.CB -10. 7.0 14.0 0.083942 bonus Constraint N104.CB Y129.CB -10. 7.0 14.0 0.083373 bonus Constraint T126.CB Q152.CB -10. 7.0 14.0 0.084086 bonus Constraint W41.CB C50.CB -10. 7.0 14.0 0.082969 bonus Constraint A63.CB F112.CB -10. 7.0 14.0 0.083041 bonus Constraint V262.CB R312.CB -10. 7.0 14.0 0.083737 bonus Constraint S14.CB N74.CB -10. 7.0 14.0 0.080725 bonus Constraint M38.CB I68.CB -10. 7.0 14.0 0.081657 bonus Constraint Y129.CB D151.CB -10. 7.0 14.0 0.082198 bonus Constraint L305.CB V322.CB -10. 7.0 14.0 0.082613 bonus Constraint C307.CB V331.CB -10. 7.0 14.0 0.082548 bonus Constraint R312.CB F333.CB -10. 7.0 14.0 0.082782 bonus Constraint I107.CB A116.CB -10. 7.0 14.0 0.080325 bonus Constraint A116.CB A125.CB -10. 7.0 14.0 0.081000 bonus Constraint Y123.CB L188.CB -10. 7.0 14.0 0.080826 bonus Constraint H128.CB H141.CB -10. 7.0 14.0 0.079783 bonus Constraint Y129.CB K150.CB -10. 7.0 14.0 0.080756 bonus Constraint P259.CB L272.CB -10. 7.0 14.0 0.080919 bonus Constraint L288.CB F311.CB -10. 7.0 14.0 0.080668 bonus Constraint L26.CB I36.CB -10. 7.0 14.0 0.079582 bonus Constraint G12.CA A63.CB -10. 7.0 14.0 0.077559 bonus Constraint V17.CB N40.CB -10. 7.0 14.0 0.078360 bonus Constraint D32.CB I68.CB -10. 7.0 14.0 0.078498 bonus Constraint I34.CB S72.CB -10. 7.0 14.0 0.078043 bonus Constraint V59.CB Y70.CB -10. 7.0 14.0 0.078048 bonus Constraint A125.CB L164.CB -10. 7.0 14.0 0.078824 bonus Constraint F261.CB N270.CB -10. 7.0 14.0 0.079144 bonus Constraint F261.CB A290.CB -10. 7.0 14.0 0.079001 bonus Constraint F261.CB R312.CB -10. 7.0 14.0 0.079467 bonus Constraint I34.CB V124.CB -10. 7.0 14.0 0.077236 bonus Constraint G35.CA V59.CB -10. 7.0 14.0 0.076710 bonus Constraint M38.CB C50.CB -10. 7.0 14.0 0.077111 bonus Constraint M38.CB V124.CB -10. 7.0 14.0 0.077129 bonus Constraint D100.CB T126.CB -10. 7.0 14.0 0.076886 bonus Constraint Y129.CB L164.CB -10. 7.0 14.0 0.077340 bonus Constraint M237.CB V263.CB -10. 7.0 14.0 0.078272 bonus Constraint F261.CB F333.CB -10. 7.0 14.0 0.078194 bonus Constraint V331.CB V346.CB -10. 7.0 14.0 0.077033 bonus Constraint F333.CB V346.CB -10. 7.0 14.0 0.077728 bonus Constraint V11.CB Y70.CB -10. 7.0 14.0 0.076004 bonus Constraint S19.CB G127.CA -10. 7.0 14.0 0.076066 bonus Constraint M38.CB G127.CA -10. 7.0 14.0 0.076152 bonus Constraint M13.CB S72.CB -10. 7.0 14.0 0.074942 bonus Constraint M13.CB G127.CA -10. 7.0 14.0 0.074918 bonus Constraint D100.CB F109.CB -10. 7.0 14.0 0.075771 bonus Constraint L288.CB Y313.CB -10. 7.0 14.0 0.076075 bonus Constraint V10.CB L25.CB -10. 7.0 14.0 0.073888 bonus Constraint V17.CB N47.CB -10. 7.0 14.0 0.074234 bonus Constraint G35.CA A125.CB -10. 7.0 14.0 0.074253 bonus Constraint N40.CB C50.CB -10. 7.0 14.0 0.074389 bonus Constraint K310.CB F333.CB -10. 7.0 14.0 0.075148 bonus Constraint G15.CA N74.CB -10. 7.0 14.0 0.073227 bonus Constraint N98.CB Y129.CB -10. 7.0 14.0 0.074069 bonus Constraint Y129.CB F201.CB -10. 7.0 14.0 0.072780 bonus Constraint A130.CB T139.CB -10. 7.0 14.0 0.073525 bonus Constraint M237.CB G264.CA -10. 7.0 14.0 0.073891 bonus Constraint F261.CB L288.CB -10. 7.0 14.0 0.074140 bonus Constraint V17.CB N98.CB -10. 7.0 14.0 0.072975 bonus Constraint T126.CB L164.CB -10. 7.0 14.0 0.073726 bonus Constraint A23.CB I36.CB -10. 7.0 14.0 0.072722 bonus Constraint M13.CB H128.CB -10. 7.0 14.0 0.071571 bonus Constraint V33.CB Y70.CB -10. 7.0 14.0 0.072429 bonus Constraint M38.CB A63.CB -10. 7.0 14.0 0.072238 bonus Constraint Y129.CB L156.CB -10. 7.0 14.0 0.072708 bonus Constraint V347.CB L359.CB -10. 7.0 14.0 0.073359 bonus Constraint G246.CA V274.CB -10. 7.0 14.0 0.072154 bonus Constraint V11.CB V21.CB -10. 7.0 14.0 0.070037 bonus Constraint S14.CB L26.CB -10. 7.0 14.0 0.070593 bonus Constraint A23.CB M38.CB -10. 7.0 14.0 0.070942 bonus Constraint G242.CA V262.CB -10. 7.0 14.0 0.070594 bonus Constraint F261.CB V347.CB -10. 7.0 14.0 0.070925 bonus Constraint L288.CB K310.CB -10. 7.0 14.0 0.071003 bonus Constraint A290.CB A309.CB -10. 7.0 14.0 0.070949 bonus Constraint F333.CB V347.CB -10. 7.0 14.0 0.071176 bonus Constraint M168.CB A186.CB -10. 7.0 14.0 0.069395 bonus Constraint R180.CB F201.CB -10. 7.0 14.0 0.069927 bonus Constraint V347.CB G356.CA -10. 7.0 14.0 0.069907 bonus Constraint V347.CB G357.CA -10. 7.0 14.0 0.070150 bonus Constraint F348.CB G358.CA -10. 7.0 14.0 0.070605 bonus Constraint F348.CB I360.CB -10. 7.0 14.0 0.070854 bonus Constraint S14.CB G35.CA -10. 7.0 14.0 0.069772 bonus Constraint S14.CB W41.CB -10. 7.0 14.0 0.069648 bonus Constraint A23.CB A63.CB -10. 7.0 14.0 0.070107 bonus Constraint N98.CB H128.CB -10. 7.0 14.0 0.070827 bonus Constraint A125.CB M142.CB -10. 7.0 14.0 0.069681 bonus Constraint M13.CB L24.CB -10. 7.0 14.0 0.067217 bonus Constraint S14.CB F75.CB -10. 7.0 14.0 0.068206 bonus Constraint S14.CB A125.CB -10. 7.0 14.0 0.068050 bonus Constraint G15.CA M38.CB -10. 7.0 14.0 0.068905 bonus Constraint I36.CB V73.CB -10. 7.0 14.0 0.068505 bonus Constraint M222.CB T240.CB -10. 7.0 14.0 0.068721 bonus Constraint Y239.CB P259.CB -10. 7.0 14.0 0.067944 bonus Constraint V263.CB L288.CB -10. 7.0 14.0 0.068240 bonus Constraint A290.CB R312.CB -10. 7.0 14.0 0.068542 bonus Constraint Y129.CB T240.CB -10. 7.0 14.0 0.067057 bonus Constraint L247.CB V263.CB -10. 7.0 14.0 0.066996 bonus Constraint A309.CB V346.CB -10. 7.0 14.0 0.067063 bonus Constraint V347.CB G358.CA -10. 7.0 14.0 0.067499 bonus Constraint V10.CB T22.CB -10. 7.0 14.0 0.066138 bonus Constraint V17.CB K39.CB -10. 7.0 14.0 0.066249 bonus Constraint V33.CB S72.CB -10. 7.0 14.0 0.065297 bonus Constraint V33.CB Y123.CB -10. 7.0 14.0 0.065932 bonus Constraint I36.CB A63.CB -10. 7.0 14.0 0.066665 bonus Constraint I36.CB Y123.CB -10. 7.0 14.0 0.066879 bonus Constraint T96.CB F201.CB -10. 7.0 14.0 0.066983 bonus