date
Sun Aug 26 18:31:51 PDT 2007
para-trickle-make -manyids -se2log -no2letter -modelsdir /projects/compbio/experiments/protein-predict/casp7 \
-makefile ./Makefile -target decoys/predictions.evaluate.predburial.rdb \
-wait \
< /projects/compbio/experiments/protein-predict/casp7/target_list.txt
para-trickle-make: -terse    option suppresses most messages.
para-trickle-make: -verbose  option generates  more messages.
para-trickle-make: -help     option gives the full usage menu.
para-trickle-make: Created joblist. See /projects/compbio/tmp/para-trickle-make-moai-karplus-31311-8403023/README for more info.
para-trickle-make: There were 1 jobs that crashed.
para-trickle-make: See /projects/compbio/tmp/para-trickle-make-moai-karplus-31311-8403023/README for more help.
date
Sun Aug 26 22:21:32 PDT 2007
echo predburial.evaluate done
predburial.evaluate done
date
Sun Aug 26 22:21:32 PDT 2007
make -k   predburial-gdt-tau.rdb predburial-gdt-tau.avg  predburial-gdt-btr.rdb predburial-gdt-btr.avg   predburial-real_cost-tau.rdb predburial-real_cost-tau.avg  predburial-real_cost-btr.rdb predburial-real_cost-btr.avg
make[1]: Entering directory `/projects/compbio/experiments/protein-predict/CostFcnEval'
make[1]: `predburial-gdt-tau.rdb' is up to date.
summ -m < predburial-gdt-tau.rdb  \
| sort -gr +7 \
> predburial-gdt-tau.avg
time cfneval.pl -s decoys/predictions.evaluate.predburial.rdb -f0 -r btr > predburial-gdt-btr.rdb

real	0m15.730s
user	0m9.898s
sys	0m0.170s
summ -m < predburial-gdt-btr.rdb  \
| sort -g +7 \
> predburial-gdt-btr.avg
time cfneval.pl -s decoys/predictions.evaluate.predburial.rdb -f20 -q real_cost > predburial-real_cost-tau.rdb

real	1m19.951s
user	0m48.917s
sys	0m0.068s
summ -m < predburial-real_cost-tau.rdb  \
| sort -gr +7 \
> predburial-real_cost-tau.avg
time cfneval.pl -s decoys/predictions.evaluate.predburial.rdb -f20 -q real_cost -r btr > predburial-real_cost-btr.rdb

real	0m10.128s
user	0m9.968s
sys	0m0.062s
summ -m < predburial-real_cost-btr.rdb  \
| sort -g +7 \
> predburial-real_cost-btr.avg
make[1]: Leaving directory `/projects/compbio/experiments/protein-predict/CostFcnEval'
date
Sun Aug 26 22:23:18 PDT 2007
echo predburial.summarize done.
predburial.summarize done.
date
Sun Aug 26 22:23:18 PDT 2007
echo predburial.all done
predburial.all done