Best Alignments for T0379

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fdrA/T0379-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0379-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7498e-216.52e-94
1x42A/T0379-1x42A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0379-1x42A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7226e-203.69e-90
1zrn/T0379-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zrn/T0379-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2172e-201.10e-86 1qq5A c.108.1.1
2gfhA/T0379-2gfhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0379-2gfhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1696e-202.47e-96
1te2A/T0379-1te2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0379-1te2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2695e-208.46e-94 c.108.1.6
2ah5A/T0379-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0379-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5946e-201.19e-88
2b0cA/T0379-2b0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b0cA/T0379-2b0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0600e-192.48e-88
2go7A/T0379-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0379-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4203e-186.66e-87
2fi1A/T0379-2fi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fi1A/T0379-2fi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5018e-171.06e-80
1swvA/T0379-1swvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0379-1swvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5165e-168.61e-72

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001