Best Alignments for T0361

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ffkB/T0361-1ffkB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ffkB/T0361-1ffkB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1400e+005.32e+03 1ffkB b.43.3.2
1v4eA/T0361-1v4eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v4eA/T0361-1v4eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3197e+006.70e-09 a.128.1.1
1f45B/T0361-1f45B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f45B/T0361-1f45B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2932e+002.08e-03 1f45B a.26.1.1
1w33A/T0361-1w33A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w33A/T0361-1w33A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7354e+009.24e-02
1av6A/T0361-1av6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1av6A/T0361-1av6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1000e+011.63e+03 3mag c.66.1.25
1y1xA/T0361-1y1xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y1xA/T0361-1y1xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1251e+011.04e-05
1t3wA/T0361-1t3wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t3wA/T0361-1t3wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2135e+018.64e-06
1ewqA/T0361-1ewqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ewqA/T0361-1ewqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3013e+012.39e-07 1ewqA a.113.1.1
c.37.1.12
c.55.6.1
d.75.2.1
1b3uA/T0361-1b3uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b3uA/T0361-1b3uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5890e+018.95e-03 1b3uA a.118.1.2
2grrB/T0361-2grrB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2grrB/T0361-2grrB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6445e+011.63e-03

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001