Best Alignments for T0337

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2cg4A/T0337-2cg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cg4A/T0337-2cg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4633e-243.82e-87
2cfxA/T0337-2cfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cfxA/T0337-2cfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3997e-224.03e-78
1sfxA/T0337-1sfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sfxA/T0337-1sfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2500e-071.94e-30 a.4.5.50
2a61A/T0337-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0337-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1229e-061.15e-27
1ulyA/T0337-1ulyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ulyA/T0337-1ulyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6665e-068.31e-30
2fbiA/T0337-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0337-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0507e-059.28e-24
1je8A/T0337-1je8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1je8A/T0337-1je8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2054e-049.40e-23 a.4.6.2
1ub9A/T0337-1ub9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0337-1ub9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3077e-046.65e-18 a.4.5.28
2fbhA/T0337-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbhA/T0337-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4194e-042.39e-24
2b0lA/T0337-2b0lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b0lA/T0337-2b0lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9340e-044.41e-22

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001