Best Alignments for T0337

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i1gA/T0337-1i1gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i1gA/T0337-1i1gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7000e-243.36e-74 a.4.5.32
d.58.4.2
2cg4A/T0337-2cg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cg4A/T0337-2cg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8624e-219.04e-85
2cfxA/T0337-2cfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cfxA/T0337-2cfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4210e-196.53e-74
1sfxA/T0337-1sfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sfxA/T0337-1sfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4239e-062.28e-29 a.4.5.50
1ulyA/T0337-1ulyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ulyA/T0337-1ulyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6004e-065.55e-28
2a61A/T0337-2a61A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0337-2a61A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3031e-054.38e-25
1s3jA/T0337-1s3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s3jA/T0337-1s3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8987e-055.83e-26 a.4.5.28
1xnpA/T0337-1xnpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xnpA/T0337-1xnpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2706e-058.84e-23
2fbiA/T0337-2fbiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0337-2fbiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3499e-045.52e-22
1u2wA/T0337-1u2wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u2wA/T0337-1u2wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7559e-047.04e-26

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001