Best Alignments for T0331

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1dnlA/T0331-1dnlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dnlA/T0331-1dnlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2390e-324.16e-87 1ci0A b.45.1.1
1t9mA/T0331-1t9mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t9mA/T0331-1t9mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2390e-245.58e-68
1ty9A/T0331-1ty9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ty9A/T0331-1ty9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2041e-225.70e-66
1rfeA/T0331-1rfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rfeA/T0331-1rfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1612e-146.02e-42
2fhqA/T0331-2fhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhqA/T0331-2fhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2915e-133.76e-40
2fg9A/T0331-2fg9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0331-2fg9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4884e-101.36e-32
2asfA/T0331-2asfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2asfA/T0331-2asfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6475e-097.94e-35
2a2jA/T0331-2a2jA-t2k-global-adpstyle1.a2m 2a2jA/T0331-2a2jA-t2k-global-adpstyle1.al 4.5578e-094.16e-41
2aq6A/T0331-2aq6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aq6A/T0331-2aq6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3118e-091.49e-29
1w9aA/T0331-1w9aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9aA/T0331-1w9aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1133e-081.16e-24

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001