Best Alignments for T0319

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1yk4A/T0319-1yk4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yk4A/T0319-1yk4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2670e+001.26e+00
1rlyA/T0319-1rlyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rlyA/T0319-1rlyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2924e+004.04e+00 g.41.3.1
1gz6A/T0319-1gz6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gz6A/T0319-1gz6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6973e+008.74e-07 c.2.1.2
1w2lA/T0319-1w2lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w2lA/T0319-1w2lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5623e+007.86e-12
1vq0A/T0319-1vq0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vq0A/T0319-1vq0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7190e+009.43e-05
1fp1D/T0319-1fp1D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fp1D/T0319-1fp1D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7243e+001.79e-05 1fpqA a.4.5.29
c.66.1.12
1wdjA/T0319-1wdjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wdjA/T0319-1wdjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0932e+002.49e-01
1b7yB/T0319-1b7yB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b7yB/T0319-1b7yB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0235e+013.12e-06 1pysB a.6.1.1
a.6.1.1
b.40.4.4
d.58.13.1
d.104.1.1
d.138.1.1
1iro/T0319-1iro-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1iro/T0319-1iro-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0642e+011.03e+02 1rb9 g.41.5.1
1v87A/T0319-1v87A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v87A/T0319-1v87A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1181e+011.23e+03 g.44.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001