Best Alignments for T0317

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wrmA/T0317-1wrmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wrmA/T0317-1wrmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7944e-251.63e-100
1yz4A/T0317-1yz4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yz4A/T0317-1yz4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1770e-242.48e-98
1mkp/T0317-1mkp-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mkp/T0317-1mkp-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0477e-241.56e-92 1vhrA c.45.1.1
1oheA/T0317-1oheA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oheA/T0317-1oheA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1412e-148.66e-50 c.45.1.1
c.45.1.1
1rxdA/T0317-1rxdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxdA/T0317-1rxdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6075e-136.76e-50
1yn9A/T0317-1yn9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yn9A/T0317-1yn9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2264e-135.93e-51
1zckA/T0317-1zckA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zckA/T0317-1zckA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5724e-133.66e-51
2c46A/T0317-2c46A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c46A/T0317-2c46A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0540e-127.57e-50
1i9sA/T0317-1i9sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i9sA/T0317-1i9sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7615e-129.77e-51 1i9sA c.45.1.1
1x24A/T0317-1x24A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x24A/T0317-1x24A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8506e-121.43e-49

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001