Best Alignments for T0303

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0303-2ah5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0303-2ah5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0263e-233.44e-101
1jud/T0303-1jud-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jud/T0303-1jud-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2486e-227.38e-94 1qq5A c.108.1.1
2fdrA/T0303-2fdrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0303-2fdrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4626e-213.78e-95
1te2A/T0303-1te2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0303-1te2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4661e-214.81e-100 c.108.1.6
2gfhA/T0303-2gfhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0303-2gfhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4751e-212.36e-96
1x42A/T0303-1x42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0303-1x42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2924e-204.08e-89
2go7A/T0303-2go7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0303-2go7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2511e-201.73e-92
1rqlA/T0303-1rqlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rqlA/T0303-1rqlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5228e-197.76e-88 c.108.1.3
1swvA/T0303-1swvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0303-1swvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6760e-192.57e-80
2fi1A/T0303-2fi1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fi1A/T0303-2fi1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0105e-182.89e-82

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001