Best Alignments for T0303

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0303-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0303-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8536e-046.26e-19
1o08A/T0303-1o08A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o08A/T0303-1o08A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4075e-027.47e-19 c.108.1.6
2go7A/T0303-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0303-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7947e-012.56e-12
2fnaA/T0303-2fnaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fnaA/T0303-2fnaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6504e-012.20e-08
1fezA/T0303-1fezA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fezA/T0303-1fezA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5390e+003.97e-12 1fezA c.108.1.3
1m5yA/T0303-1m5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m5yA/T0303-1m5yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6699e+005.11e-10 a.167.1.1
d.26.1.1
d.26.1.1
1k0dA/T0303-1k0dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k0dA/T0303-1k0dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8118e+003.46e-09 a.45.1.1
c.47.1.5
1zkrA/T0303-1zkrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zkrA/T0303-1zkrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1814e+007.40e-08
1puoA/T0303-1puoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1puoA/T0303-1puoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7115e+001.51e-09 a.101.1.1
a.101.1.1
2fdrA/T0303-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0303-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7665e+004.69e-07

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001