Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g03A/T0386-2g03A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g03A/T0386-2g03A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5976e-194.27e-69
2f6sA/T0386-2f6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6sA/T0386-2f6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3755e-185.02e-64
1d5rA/T0386-1d5rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0386-1d5rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5537e-012.36e-15 1d5rA b.7.1.1
c.45.1.1
1exrA/T0386-1exrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1exrA/T0386-1exrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7513e+001.03e-11 1cll a.39.1.5
1g8lA/T0386-1g8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g8lA/T0386-1g8lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9372e+001.18e-11 1g8lA b.85.6.1
b.103.1.1
c.57.1.2
1nh1A/T0386-1nh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nh1A/T0386-1nh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7312e+001.67e-19 e.45.1.1
2f3yA/T0386-2f3yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f3yA/T0386-2f3yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8723e+001.52e-11
1sxjE/T0386-1sxjE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sxjE/T0386-1sxjE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2342e+001.74e-07 a.80.1.1
c.37.1.20
1pi1A/T0386-1pi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pi1A/T0386-1pi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1538e+002.86e-13 a.29.7.1
1r2rA/T0386-1r2rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r2rA/T0386-1r2rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1594e+003.91e-06 c.1.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001