Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g03A/T0386-2g03A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g03A/T0386-2g03A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4961e-193.35e-63
2f6sA/T0386-2f6sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6sA/T0386-2f6sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5012e-186.73e-59
1d5rA/T0386-1d5rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0386-1d5rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2414e-025.10e-12 1d5rA b.7.1.1
c.45.1.1
1sxjE/T0386-1sxjE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sxjE/T0386-1sxjE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7129e+002.30e-07 a.80.1.1
c.37.1.20
1fpwA/T0386-1fpwA-t2k-global-adpstyle1.a2m 1fpwA/T0386-1fpwA-t2k-global-adpstyle1.al 7.0556e+001.53e-02 1rec a.39.1.5
1osa/T0386-1osa-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1osa/T0386-1osa-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8045e+002.61e-06 1cll a.39.1.5
1xxqA/T0386-1xxqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxqA/T0386-1xxqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0643e+014.48e-01
1nh1A/T0386-1nh1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nh1A/T0386-1nh1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1006e+014.64e-14 e.45.1.1
2avpA/T0386-2avpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2avpA/T0386-2avpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2668e+012.86e-03
1fduA/T0386-1fduA-t2k-local-adpstyle1.a2m 1fduA/T0386-1fduA-t2k-local-adpstyle1.al 1.3180e+019.44e+00 1fds c.2.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001