Best Alignments for T0386

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i9sA/T0386-1i9sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i9sA/T0386-1i9sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0489e+009.35e+03 1i9sA c.45.1.1
2c46A/T0386-2c46A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c46A/T0386-2c46A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9211e+008.01e+03
1kxrA/T0386-1kxrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kxrA/T0386-1kxrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1600e+012.81e+03 d.3.1.3
1r6xA/T0386-1r6xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r6xA/T0386-1r6xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1839e+013.95e+01 b.122.1.3
c.26.1.5
2d0sA/T0386-2d0sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d0sA/T0386-2d0sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2894e+018.84e-01
2a5vA/T0386-2a5vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a5vA/T0386-2a5vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5307e+011.02e+03
2g3mA/T0386-2g3mA-t04-local-adpstyle1.a2m 2g3mA/T0386-2g3mA-t04-local-adpstyle1.al 1.5393e+015.62e+01
1g8fA/T0386-1g8fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g8fA/T0386-1g8fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5978e+011.69e+01 1g8fA b.122.1.3
c.26.1.5
c.37.1.15
1i7hA/T0386-1i7hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i7hA/T0386-1i7hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7563e+011.77e-01 d.15.4.1
1ym3A/T0386-1ym3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ym3A/T0386-1ym3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7663e+016.99e+02

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001