Best Alignments for T0384

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1h6dA/T0384-1h6dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h6dA/T0384-1h6dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6110e-381.98e-185 c.2.1.3
d.81.1.5
1rydA/T0384-1rydA-t04-global-adpstyle1.a2m 1rydA/T0384-1rydA-t04-global-adpstyle1.al 5.0876e-352.47e-74
1zh8A/T0384-1zh8A-t04-global-adpstyle1.a2m 1zh8A/T0384-1zh8A-t04-global-adpstyle1.al 2.4205e-332.47e-74
1ydwA/T0384-1ydwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ydwA/T0384-1ydwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7542e-321.90e-153
1lc0A/T0384-1lc0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lc0A/T0384-1lc0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6536e-211.34e-117 c.2.1.3
d.81.1.4
2h63A/T0384-2h63A-t04-global-adpstyle1.a2m 2h63A/T0384-2h63A-t04-global-adpstyle1.al 6.7556e-152.70e-38
1ff9A/T0384-1ff9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ff9A/T0384-1ff9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7256e-113.12e-79 1ff9A c.2.1.3
d.81.1.2
1f06A/T0384-1f06A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f06A/T0384-1f06A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4319e-103.11e-60 1dapA c.2.1.3
d.81.1.3
1drw/T0384-1drw-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1drw/T0384-1drw-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4657e-094.72e-63 1drw c.2.1.3
d.81.1.3
2czcA/T0384-2czcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2czcA/T0384-2czcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8581e-081.05e-64

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001