Best Alignments for T0383

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1qynA/T0383-1qynA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qynA/T0383-1qynA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3577e+006.38e-13 d.33.1.1
1mugA/T0383-1mugA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mugA/T0383-1mugA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1510e+001.87e-08 1mugA c.18.1.2
1u6zA/T0383-1u6zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u6zA/T0383-1u6zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6849e+002.50e-08
1xx7A/T0383-1xx7A-t2k-local-adpstyle1.a2m 1xx7A/T0383-1xx7A-t2k-local-adpstyle1.al 9.8050e+007.57e+00
1x5kA/T0383-1x5kA-t2k-global-adpstyle1.a2m 1x5kA/T0383-1x5kA-t2k-global-adpstyle1.al 1.2425e+012.23e+00
1r8jA/T0383-1r8jA-t06-local-adpstyle1.a2m 1r8jA/T0383-1r8jA-t06-local-adpstyle1.al 1.4803e+011.22e+01 a.186.1.1
c.23.1.5
1e6zA/1e15A-T0383-fssp-local-adpstyle5.a2m 1e6zA/1e15A-T0383-fssp-local-adpstyle5.al 1.6898e+018.34e+02 1e15A b.72.2.1
c.1.8.5
d.26.3.1
1oshA/T0383-1oshA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oshA/T0383-1oshA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6900e+013.61e-02 a.123.1.1
1xnzA/T0383-1xnzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xnzA/T0383-1xnzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7491e+013.12e-07
1ijbA/T0383-1ijbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ijbA/T0383-1ijbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8787e+013.01e-02 c.62.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001