Best Alignments for T0383

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1qynA/T0383-1qynA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qynA/T0383-1qynA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3932e+005.80e-12 d.33.1.1
1mugA/T0383-1mugA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mugA/T0383-1mugA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2657e+009.67e-07 1mugA c.18.1.2
1u6zA/T0383-1u6zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u6zA/T0383-1u6zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8131e+002.18e-05
1xx7A/T0383-1xx7A-t2k-local-adpstyle1.a2m 1xx7A/T0383-1xx7A-t2k-local-adpstyle1.al 1.0054e+017.57e+00
1k3xA/T0383-1k3xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k3xA/T0383-1k3xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8851e+017.98e-03 a.156.1.2
b.113.1.1
g.39.1.8
1e6zA/T0383-1e6zA-t2k-local-adpstyle1.a2m 1e6zA/T0383-1e6zA-t2k-local-adpstyle1.al 1.9212e+012.28e+01 1e15A b.72.2.1
c.1.8.5
d.26.3.1
1x5kA/T0383-1x5kA-t2k-global-adpstyle1.a2m 1x5kA/T0383-1x5kA-t2k-global-adpstyle1.al 2.0990e+012.23e+00
1oshA/T0383-1oshA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oshA/T0383-1oshA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2676e+016.91e-01 a.123.1.1
1bh9A/T0383-1bh9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bh9A/T0383-1bh9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4871e+011.52e-01 1bh9A a.22.1.3
1auq/T0383-1auq-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1auq/T0383-1auq-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4899e+011.36e-01 1auq c.62.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001