# TARGET T0382 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0382.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 10 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 M 0.025 0.010 0.003 0.033 0.175 0.754 2 S 0.032 0.017 0.008 0.070 0.190 0.684 3 K 0.024 0.013 0.048 0.228 0.284 0.403 4 L 0.019 0.007 0.075 0.271 0.357 0.271 5 D 0.026 0.008 0.077 0.175 0.334 0.379 6 L 0.055 0.020 0.175 0.171 0.330 0.249 7 H 0.076 0.010 0.158 0.157 0.304 0.295 8 Q 0.246 0.015 0.111 0.129 0.245 0.255 9 M 0.322 0.035 0.029 0.078 0.144 0.391 10 T 0.172 0.062 0.005 0.045 0.062 0.653 11 T 0.005 0.001 0.022 0.914 0.026 0.033 12 Q 0.001 0.001 0.009 0.978 0.009 0.003 13 D 0.001 0.001 0.009 0.973 0.013 0.004 14 L 0.001 0.001 0.004 0.990 0.004 0.001 15 V 0.001 0.001 0.001 0.996 0.002 0.001 16 A 0.001 0.001 0.001 0.997 0.002 0.001 17 L 0.001 0.001 0.001 0.995 0.003 0.001 18 F 0.001 0.001 0.001 0.991 0.004 0.003 19 A 0.001 0.001 0.002 0.986 0.007 0.005 20 K 0.001 0.001 0.003 0.971 0.015 0.010 21 V 0.001 0.001 0.003 0.965 0.014 0.018 22 T 0.003 0.001 0.004 0.870 0.032 0.090 23 V 0.007 0.001 0.007 0.894 0.035 0.056 24 E 0.015 0.005 0.011 0.851 0.052 0.066 25 Q 0.010 0.001 0.014 0.865 0.055 0.054 26 D 0.011 0.001 0.025 0.851 0.066 0.045 27 D 0.011 0.002 0.042 0.858 0.059 0.028 28 A 0.014 0.002 0.041 0.857 0.059 0.026 29 L 0.030 0.005 0.036 0.784 0.075 0.070 30 L 0.035 0.006 0.024 0.635 0.128 0.173 31 G 0.009 0.002 0.025 0.696 0.111 0.155 32 N 0.009 0.004 0.038 0.516 0.195 0.238 33 Q 0.007 0.004 0.043 0.550 0.178 0.218 34 I 0.003 0.002 0.023 0.895 0.044 0.033 35 S 0.002 0.001 0.014 0.907 0.049 0.026 36 R 0.002 0.001 0.011 0.939 0.026 0.021 37 F 0.002 0.002 0.006 0.947 0.019 0.024 38 N 0.001 0.001 0.003 0.974 0.012 0.010 39 R 0.001 0.001 0.003 0.980 0.009 0.006 40 L 0.001 0.001 0.003 0.972 0.013 0.010 41 F 0.001 0.001 0.002 0.975 0.011 0.010 42 G 0.001 0.001 0.002 0.967 0.012 0.017 43 V 0.001 0.001 0.002 0.967 0.010 0.020 44 M 0.001 0.001 0.001 0.984 0.003 0.011 45 A 0.001 0.001 0.001 0.985 0.003 0.011 46 E 0.001 0.001 0.001 0.992 0.003 0.004 47 I 0.001 0.001 0.001 0.993 0.002 0.003 48 A 0.001 0.001 0.004 0.991 0.003 0.002 49 D 0.001 0.001 0.009 0.985 0.003 0.002 50 E 0.001 0.001 0.014 0.981 0.003 0.002 51 L 0.001 0.001 0.011 0.980 0.006 0.003 52 K 0.001 0.001 0.015 0.962 0.014 0.009 53 A 0.001 0.001 0.013 0.730 0.093 0.163 54 R 0.001 0.002 0.011 0.192 0.191 0.604 55 D 0.001 0.003 0.015 0.144 0.201 0.636 56 G 0.001 0.003 0.089 0.535 0.157 0.216 57 D 0.001 0.002 0.102 0.743 0.078 0.074 58 Q 0.001 0.001 0.008 0.987 0.002 0.002 59 R 0.001 0.001 0.001 0.999 0.001 0.001 60 T 0.001 0.001 0.001 0.999 0.001 0.001 61 A 0.001 0.001 0.001 0.999 0.001 0.001 62 L 0.001 0.001 0.001 0.999 0.001 0.001 63 L 0.001 0.001 0.001 0.998 0.001 0.001 64 S 0.001 0.001 0.001 0.995 0.002 0.001 65 L 0.001 0.001 0.002 0.988 0.007 0.003 66 F 0.001 0.004 0.006 0.949 0.026 0.015 67 E 0.001 0.003 0.011 0.767 0.120 0.098 68 Y 0.001 0.003 0.028 0.510 0.317 0.140 69 P 0.001 0.004 0.020 0.293 0.362 0.319 70 N 0.001 0.005 0.010 0.297 0.250 0.437 71 M 0.001 0.001 0.002 0.936 0.031 0.031 72 Q 0.001 0.001 0.001 0.984 0.006 0.009 73 V 0.001 0.001 0.001 0.999 0.001 0.001 74 R 0.001 0.001 0.001 0.999 0.001 0.001 75 L 0.001 0.001 0.001 0.999 0.001 0.001 76 Q 0.001 0.001 0.001 0.998 0.001 0.001 77 A 0.001 0.001 0.002 0.995 0.003 0.001 78 A 0.001 0.001 0.003 0.990 0.005 0.002 79 K 0.001 0.001 0.004 0.973 0.013 0.009 80 L 0.001 0.001 0.013 0.933 0.030 0.022 81 T 0.023 0.005 0.043 0.716 0.131 0.082 82 L 0.063 0.007 0.067 0.426 0.228 0.208 83 A 0.336 0.023 0.038 0.197 0.225 0.180 84 V 0.383 0.020 0.018 0.129 0.129 0.320 85 A 0.098 0.014 0.003 0.066 0.128 0.691 86 P 0.004 0.001 0.008 0.867 0.050 0.070 87 V 0.001 0.001 0.005 0.978 0.013 0.004 88 K 0.001 0.001 0.003 0.985 0.010 0.002 89 A 0.001 0.001 0.001 0.991 0.004 0.002 90 R 0.001 0.001 0.001 0.998 0.001 0.001 91 E 0.001 0.001 0.001 0.998 0.001 0.001 92 Q 0.001 0.001 0.001 0.998 0.001 0.001 93 L 0.001 0.001 0.001 0.997 0.001 0.001 94 E 0.001 0.001 0.001 0.996 0.002 0.001 95 A 0.001 0.001 0.002 0.988 0.005 0.005 96 I 0.002 0.001 0.002 0.978 0.009 0.009 97 V 0.004 0.001 0.007 0.961 0.014 0.014 98 S 0.006 0.001 0.013 0.868 0.058 0.053 99 S 0.005 0.001 0.021 0.693 0.105 0.176 100 K 0.012 0.003 0.008 0.061 0.228 0.688 101 W 0.037 0.014 0.014 0.034 0.275 0.625 102 F 0.073 0.023 0.014 0.032 0.308 0.550 103 P 0.052 0.022 0.030 0.026 0.375 0.496 104 Q 0.044 0.022 0.032 0.025 0.516 0.361 105 A 0.031 0.014 0.035 0.033 0.532 0.354 106 G 0.015 0.018 0.017 0.036 0.454 0.460 107 D 0.016 0.025 0.023 0.130 0.476 0.331 108 A 0.005 0.004 0.027 0.777 0.136 0.051 109 G 0.005 0.002 0.024 0.832 0.112 0.024 110 M 0.008 0.005 0.027 0.878 0.070 0.013 111 C 0.011 0.006 0.021 0.897 0.044 0.021 112 L 0.016 0.006 0.025 0.890 0.045 0.018 113 D 0.015 0.004 0.024 0.884 0.051 0.022 114 L 0.018 0.008 0.036 0.789 0.116 0.033 115 L 0.017 0.007 0.050 0.687 0.184 0.055 116 D 0.016 0.003 0.064 0.454 0.347 0.116 117 D 0.040 0.006 0.047 0.212 0.457 0.237 118 G 0.063 0.018 0.015 0.024 0.323 0.557 119 T 0.207 0.011 0.010 0.011 0.199 0.562 120 F 0.459 0.034 0.011 0.009 0.140 0.347 121 K 0.246 0.049 0.008 0.009 0.139 0.549 122 P 0.103 0.017 0.006 0.011 0.092 0.771 123 K 0.001 0.001 0.001 0.001 0.019 0.977