Best Alignments for T0381

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mkmA/T0381-1mkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mkmA/T0381-1mkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3781e-391.59e-145 a.4.5.33
d.110.2.2
2g7uA/T0381-2g7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g7uA/T0381-2g7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5811e-371.86e-137
1yspA/T0381-1yspA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yspA/T0381-1yspA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1355e-291.10e-99
1td5A/T0381-1td5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1td5A/T0381-1td5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6562e-291.34e-96 d.110.2.2
1ysqA/T0381-1ysqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ysqA/T0381-1ysqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7638e-272.51e-90
1on2A/T0381-1on2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1on2A/T0381-1on2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6547e-052.35e-30 a.4.5.24
a.76.1.1
1r7jA/T0381-1r7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r7jA/T0381-1r7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0994e-045.38e-21 a.4.5.49
1q1hA/T0381-1q1hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q1hA/T0381-1q1hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4967e-044.31e-16 a.4.5.41
1j5yA/T0381-1j5yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j5yA/T0381-1j5yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6652e-041.07e-31 a.4.5.1
d.94.2.1
2fbhA/T0381-2fbhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbhA/T0381-2fbhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8029e-043.47e-19

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001