Best Alignments for T0381

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g7uA/T0381-2g7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g7uA/T0381-2g7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1521e-141.81e-35
1mkmA/T0381-1mkmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mkmA/T0381-1mkmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3969e-101.53e-31 a.4.5.33
d.110.2.2
1r7jA/T0381-1r7jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r7jA/T0381-1r7jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1816e-044.62e-23 a.4.5.49
2fbhA/T0381-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbhA/T0381-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9187e-049.67e-21
1q1hA/T0381-1q1hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q1hA/T0381-1q1hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0680e-043.82e-19 a.4.5.41
1r1tA/T0381-1r1tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r1tA/T0381-1r1tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8100e-042.16e-25 a.4.5.5
1on2A/T0381-1on2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1on2A/T0381-1on2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0344e-041.66e-23 a.4.5.24
a.76.1.1
1ulyA/T0381-1ulyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ulyA/T0381-1ulyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7440e-041.03e-21
1qbjA/T0381-1qbjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qbjA/T0381-1qbjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9869e-047.52e-19 1qbjA a.4.5.19
1u2wA/T0381-1u2wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u2wA/T0381-1u2wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1216e-043.90e-24

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001