Best Alignments for T0380

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fhqA/T0380-2fhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhqA/T0380-2fhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8795e-146.65e-79
1dnlA/T0380-1dnlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dnlA/T0380-1dnlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1725e-149.48e-69 1ci0A b.45.1.1
1rfeA/T0380-1rfeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rfeA/T0380-1rfeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4006e-122.19e-62
1t9mA/T0380-1t9mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t9mA/T0380-1t9mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4328e-112.98e-62
1ty9A/T0380-1ty9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ty9A/T0380-1ty9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1101e-117.61e-64
2a2jA/T0380-2a2jA-t04-global-adpstyle1.a2m 2a2jA/T0380-2a2jA-t04-global-adpstyle1.al 6.5234e-114.04e-28
2fg9A/T0380-2fg9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0380-2fg9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8213e-104.97e-56
2asfA/T0380-2asfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2asfA/T0380-2asfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1433e-091.71e-56
2aq6A/T0380-2aq6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aq6A/T0380-2aq6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0409e-093.53e-45
1w9aA/T0380-1w9aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9aA/T0380-1w9aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3801e-082.86e-44

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001