Best Alignments for T0380

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fhqA/T0380-2fhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhqA/T0380-2fhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1337e-166.65e-79
1g79A/T0380-1g79A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g79A/T0380-1g79A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3447e-124.26e-52 1ci0A b.45.1.1
1rfeA/T0380-1rfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rfeA/T0380-1rfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5092e-113.11e-49
2fg9A/T0380-2fg9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0380-2fg9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4101e-082.59e-42
1t9mA/T0380-1t9mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t9mA/T0380-1t9mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1515e-084.38e-43
2asfA/T0380-2asfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2asfA/T0380-2asfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4708e-073.21e-46
1ty9A/T0380-1ty9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ty9A/T0380-1ty9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4939e-071.06e-41
2aq6A/T0380-2aq6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aq6A/T0380-2aq6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0158e-052.57e-30
1w9aA/T0380-1w9aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9aA/T0380-1w9aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9208e-051.12e-26
1xxoA/T0380-1xxoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxoA/T0380-1xxoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4229e-051.68e-28

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001