Best Alignments for T0378

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gz0A/T0378-1gz0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gz0A/T0378-1gz0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2500e-244.18e-122 c.116.1.1
d.79.3.3
1x7oA/T0378-1x7oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x7oA/T0378-1x7oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6645e-222.19e-112
1v2xA/T0378-1v2xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v2xA/T0378-1v2xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4245e-181.25e-75 c.116.1.1
1zjrA/T0378-1zjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zjrA/T0378-1zjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6975e-176.87e-76
1z85A/T0378-1z85A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z85A/T0378-1z85A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0212e-016.70e-27
1v6zA/T0378-1v6zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v6zA/T0378-1v6zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3881e-013.27e-18
1nxzA/T0378-1nxzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nxzA/T0378-1nxzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8137e-011.72e-25 b.122.1.2
c.116.1.5
2as0A/T0378-2as0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2as0A/T0378-2as0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1681e-013.28e-24
1qwgA/T0378-1qwgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qwgA/T0378-1qwgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7887e-011.95e-21 c.1.27.1
1zxxA/T0378-1zxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zxxA/T0378-1zxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2687e+006.40e-13

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001