Best Alignments for T0377

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zpwX/T0377-1zpwX-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zpwX/T0377-1zpwX-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6019e-128.45e-34
2ivyA/T0377-2ivyA-t2k-global-adpstyle1.a2m 2ivyA/T0377-2ivyA-t2k-global-adpstyle1.al 6.0238e-093.40e-36
1uw1A/T0377-1uw1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uw1A/T0377-1uw1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3352e-011.21e-10 k.42.1.1
1oz9A/T0377-1oz9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oz9A/T0377-1oz9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2434e+001.22e-02 d.92.1.15
1gyxA/T0377-1gyxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gyxA/T0377-1gyxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6170e+004.82e-09 d.80.1.1
1vdxA/T0377-1vdxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vdxA/T0377-1vdxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7519e+002.15e-09
1ta9A/T0377-1ta9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ta9A/T0377-1ta9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8241e+002.69e-10
1vgjA/T0377-1vgjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vgjA/T0377-1vgjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8736e+002.80e-09
1fmcA/T0377-1fmcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fmcA/T0377-1fmcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4480e+001.95e-08 1cydA c.2.1.2
1m7bA/T0377-1m7bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m7bA/T0377-1m7bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7764e+004.50e-05 c.37.1.8

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001