Best Alignments for T0377

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zpwX/T0377-1zpwX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zpwX/T0377-1zpwX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6551e-131.80e-33
2ivyA/T0377-2ivyA-t04-global-adpstyle1.a2m 2ivyA/T0377-2ivyA-t04-global-adpstyle1.al 3.7334e-097.00e-29
1vdxA/T0377-1vdxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vdxA/T0377-1vdxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2524e-012.15e-14
1vgjA/T0377-1vgjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vgjA/T0377-1vgjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2770e-011.34e-13
1oz9A/T0377-1oz9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oz9A/T0377-1oz9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8453e+001.15e-04 d.92.1.15
1ta9A/T0377-1ta9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ta9A/T0377-1ta9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9221e+002.72e-10
1ydyA/T0377-1ydyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ydyA/T0377-1ydyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0530e+003.06e+01
1t8qA/T0377-1t8qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t8qA/T0377-1t8qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2298e+002.04e+01 c.1.18.3
1fmcA/T0377-1fmcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fmcA/T0377-1fmcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5809e+001.07e-05 1cydA c.2.1.2
1m7bA/T0377-1m7bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m7bA/T0377-1m7bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0580e+005.19e-04 c.37.1.8

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001