Best Alignments for T0375

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1rkd/T0375-1rkd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rkd/T0375-1rkd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1098e-381.18e-162 1rkd c.72.1.1
2fv7A/T0375-2fv7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fv7A/T0375-2fv7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1520e-362.97e-159
1tyyA/T0375-1tyyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tyyA/T0375-1tyyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0156e-335.46e-131
2afbA/T0375-2afbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2afbA/T0375-2afbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8772e-315.55e-135
2dcnA/T0375-2dcnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dcnA/T0375-2dcnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3220e-305.62e-134
2abqA/T0375-2abqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2abqA/T0375-2abqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2153e-282.30e-121
2absA/T0375-2absA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2absA/T0375-2absA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1145e-283.33e-125
2f02A/T0375-2f02A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f02A/T0375-2f02A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5775e-262.02e-116
2awdA/T0375-2awdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2awdA/T0375-2awdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6327e-253.28e-116
2ajrA/T0375-2ajrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ajrA/T0375-2ajrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5210e-215.01e-92

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001