Best Alignments for T0375

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1rkd/T0375-1rkd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rkd/T0375-1rkd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4132e-352.06e-161 1rkd c.72.1.1
2fv7A/T0375-2fv7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fv7A/T0375-2fv7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2354e-343.85e-160
2dcnA/T0375-2dcnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dcnA/T0375-2dcnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4843e-313.04e-139
2afbA/T0375-2afbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2afbA/T0375-2afbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1408e-315.26e-144
1tyyA/T0375-1tyyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tyyA/T0375-1tyyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7167e-306.19e-132
2abqA/T0375-2abqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2abqA/T0375-2abqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7240e-291.60e-128
2absA/T0375-2absA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2absA/T0375-2absA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5245e-285.23e-132
2f02A/T0375-2f02A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f02A/T0375-2f02A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8845e-271.65e-127
2awdA/T0375-2awdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2awdA/T0375-2awdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4116e-264.89e-127
2ajrA/T0375-2ajrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ajrA/T0375-2ajrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2799e-241.49e-109

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001