Best Alignments for T0373

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2a61A/T0373-2a61A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0373-2a61A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9759e-173.58e-72
2fbhA/T0373-2fbhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbhA/T0373-2fbhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8591e-165.08e-70
1s3jA/T0373-1s3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s3jA/T0373-1s3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7106e-161.39e-71 a.4.5.28
2fbiA/T0373-2fbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0373-2fbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2649e-156.18e-65
2ethA/T0373-2ethA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ethA/T0373-2ethA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3137e-157.65e-64
1z91A/T0373-1z91A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z91A/T0373-1z91A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1129e-144.91e-48
2fbkA/T0373-2fbkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbkA/T0373-2fbkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8964e-147.30e-62
1p4xA/T0373-1p4xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p4xA/T0373-1p4xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1818e-091.16e-50 a.4.5.28
a.4.5.28
2fxaA/T0373-2fxaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fxaA/T0373-2fxaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0164e-086.45e-51
1on2A/T0373-1on2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1on2A/T0373-1on2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7441e-074.25e-45 a.4.5.24
a.76.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001